Query 007496
Match_columns 601
No_of_seqs 501 out of 2916
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 03:10:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007496.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007496hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nva_A CTP synthase; rossman f 100.0 5E-199 2E-203 1612.5 40.3 529 1-548 3-534 (535)
2 1vco_A CTP synthetase; tetrame 100.0 3E-164 9E-169 1357.0 39.8 529 1-549 12-546 (550)
3 1s1m_A CTP synthase; CTP synth 100.0 2E-162 8E-167 1340.2 40.5 527 1-550 3-540 (545)
4 2c5m_A CTP synthase; cytidine 100.0 1E-144 5E-149 1078.0 18.6 272 1-272 23-294 (294)
5 2vo1_A CTP synthase 1; pyrimid 100.0 3E-142 9E-147 1070.1 17.6 273 1-273 23-295 (295)
6 2v4u_A CTP synthase 2; pyrimid 100.0 3.3E-49 1.1E-53 407.7 22.3 276 283-559 11-287 (289)
7 2w7t_A CTP synthetase, putativ 100.0 4.2E-46 1.4E-50 381.5 20.0 252 297-557 8-265 (273)
8 1a9x_B Carbamoyl phosphate syn 100.0 1.3E-40 4.3E-45 355.1 15.3 293 178-548 51-375 (379)
9 3fij_A LIN1909 protein; 11172J 99.9 1.8E-27 6.3E-32 240.5 17.5 193 314-550 31-244 (254)
10 2a9v_A GMP synthase; structura 99.9 4.7E-25 1.6E-29 217.3 17.6 189 296-549 12-202 (212)
11 1qdl_B Protein (anthranilate s 99.9 2.1E-24 7.1E-29 209.4 18.0 181 300-544 4-193 (195)
12 4gud_A Imidazole glycerol phos 99.9 5.6E-25 1.9E-29 214.8 10.2 199 299-549 4-207 (211)
13 1wl8_A GMP synthase [glutamine 99.9 5.1E-24 1.7E-28 205.1 15.9 184 298-547 1-187 (189)
14 2vpi_A GMP synthase; guanine m 99.9 2E-24 7E-29 214.0 10.4 184 298-546 25-210 (218)
15 1l9x_A Gamma-glutamyl hydrolas 99.9 1.4E-23 4.8E-28 218.9 13.5 205 297-550 30-280 (315)
16 3uow_A GMP synthetase; structu 99.9 2.8E-23 9.4E-28 231.8 15.9 213 298-554 8-237 (556)
17 3r75_A Anthranilate/para-amino 99.9 2.4E-23 8.1E-28 235.6 13.3 181 297-549 446-636 (645)
18 2ywj_A Glutamine amidotransfer 99.9 5.5E-23 1.9E-27 197.2 13.2 183 298-548 1-185 (186)
19 3tqi_A GMP synthase [glutamine 99.9 2.5E-23 8.7E-28 230.7 12.3 195 298-553 11-211 (527)
20 1i1q_B Anthranilate synthase c 99.9 6.7E-22 2.3E-26 191.1 19.0 188 298-547 1-190 (192)
21 1o1y_A Conserved hypothetical 99.9 4E-22 1.4E-26 199.9 17.1 189 291-548 6-202 (239)
22 1gpm_A GMP synthetase, XMP ami 99.9 7.6E-23 2.6E-27 226.8 10.3 189 298-550 8-205 (525)
23 3d54_D Phosphoribosylformylgly 99.9 3.4E-21 1.2E-25 187.6 16.5 187 298-547 3-212 (213)
24 2ywb_A GMP synthase [glutamine 99.9 3.5E-22 1.2E-26 220.4 9.3 180 300-546 2-184 (503)
25 1gpw_B Amidotransferase HISH; 99.8 1.3E-21 4.4E-26 189.8 9.1 184 298-548 1-199 (201)
26 3l7n_A Putative uncharacterize 99.8 2.3E-20 8E-25 186.3 18.2 184 298-549 1-197 (236)
27 3m3p_A Glutamine amido transfe 99.8 7.6E-20 2.6E-24 185.1 17.5 185 298-548 4-193 (250)
28 1q7r_A Predicted amidotransfer 99.8 3.7E-20 1.3E-24 182.7 12.6 185 296-548 22-211 (219)
29 2ywd_A Glutamine amidotransfer 99.8 7.1E-20 2.4E-24 175.6 14.1 181 298-547 3-190 (191)
30 2vxo_A GMP synthase [glutamine 99.8 1.6E-20 5.6E-25 214.1 9.8 180 298-544 30-212 (697)
31 2nv0_A Glutamine amidotransfer 99.8 7E-20 2.4E-24 176.9 12.4 185 298-550 2-191 (196)
32 1ka9_H Imidazole glycerol phos 99.8 7.2E-20 2.5E-24 177.8 9.8 184 298-546 3-200 (200)
33 2iss_D Glutamine amidotransfer 99.8 2.7E-19 9.2E-24 175.1 11.5 186 294-546 17-207 (208)
34 2abw_A PDX2 protein, glutamina 99.7 6.5E-18 2.2E-22 167.1 11.7 198 297-550 3-217 (227)
35 1jvn_A Glutamine, bifunctional 99.6 6.4E-17 2.2E-21 180.5 4.1 197 298-546 5-215 (555)
36 2h2w_A Homoserine O-succinyltr 99.5 7.5E-13 2.6E-17 137.8 17.8 207 296-548 46-264 (312)
37 2vdj_A Homoserine O-succinyltr 99.5 6.3E-13 2.2E-17 137.9 16.8 196 296-531 34-241 (301)
38 3ugj_A Phosphoribosylformylgly 98.9 1.3E-08 4.3E-13 122.9 16.9 197 297-533 1047-1276(1303)
39 3l4e_A Uncharacterized peptida 98.3 6.5E-07 2.2E-11 87.9 6.2 92 297-405 27-127 (206)
40 1fy2_A Aspartyl dipeptidase; s 98.3 4.3E-07 1.5E-11 90.2 4.1 88 297-405 31-127 (229)
41 1oi4_A Hypothetical protein YH 97.4 0.00036 1.2E-08 66.9 8.4 103 296-406 22-133 (193)
42 4dzz_A Plasmid partitioning pr 96.8 0.0051 1.8E-07 57.7 10.2 97 1-165 1-97 (206)
43 3l18_A Intracellular protease 96.8 0.0026 8.9E-08 58.9 8.0 102 297-406 2-110 (168)
44 3qxc_A Dethiobiotin synthetase 96.5 0.0085 2.9E-07 59.9 9.5 171 1-219 21-199 (242)
45 3of5_A Dethiobiotin synthetase 96.0 0.012 4.1E-07 58.0 7.5 168 1-218 4-178 (228)
46 4hcj_A THIJ/PFPI domain protei 95.9 0.0064 2.2E-07 57.9 4.7 45 361-405 68-115 (177)
47 1hyq_A MIND, cell division inh 95.5 0.076 2.6E-06 51.9 10.9 41 1-42 2-42 (263)
48 3fgn_A Dethiobiotin synthetase 95.2 0.033 1.1E-06 55.9 7.5 167 1-218 26-195 (251)
49 3l3b_A ES1 family protein; ssg 95.2 0.013 4.6E-07 58.5 4.3 47 361-407 106-167 (242)
50 2vrn_A Protease I, DR1199; cys 95.1 0.012 4E-07 55.6 3.5 100 297-406 9-123 (190)
51 1xjc_A MOBB protein homolog; s 95.1 0.024 8.1E-07 53.8 5.5 44 1-46 4-48 (169)
52 3cne_A Putative protease I; st 94.9 0.018 6.3E-07 53.5 4.3 46 361-406 65-119 (175)
53 2ph1_A Nucleotide-binding prot 94.9 0.18 6E-06 49.8 11.5 42 1-43 18-59 (262)
54 2rk3_A Protein DJ-1; parkinson 94.8 0.015 5.1E-07 55.4 3.2 102 298-405 4-113 (197)
55 3f5d_A Protein YDEA; unknow pr 94.7 0.045 1.5E-06 53.1 6.4 46 361-406 62-108 (206)
56 2fex_A Conserved hypothetical 94.7 0.016 5.5E-07 54.7 3.2 45 361-405 62-108 (188)
57 1vhq_A Enhancing lycopene bios 94.5 0.021 7.1E-07 56.1 3.8 47 361-407 89-149 (232)
58 3efe_A THIJ/PFPI family protei 94.3 0.057 2E-06 52.3 6.3 45 361-405 73-119 (212)
59 2ab0_A YAJL; DJ-1/THIJ superfa 94.3 0.016 5.5E-07 55.8 2.3 45 361-405 65-114 (205)
60 2xj4_A MIPZ; replication, cell 94.3 0.26 9E-06 49.3 11.4 40 2-42 5-44 (286)
61 3er6_A Putative transcriptiona 94.3 0.04 1.4E-06 53.3 5.1 48 359-406 71-123 (209)
62 3en0_A Cyanophycinase; serine 94.2 0.098 3.4E-06 53.7 8.0 109 282-405 43-159 (291)
63 2xxa_A Signal recognition part 94.2 0.45 1.5E-05 51.3 13.6 41 2-44 101-142 (433)
64 1u9c_A APC35852; structural ge 94.2 0.029 9.9E-07 54.3 3.8 45 361-405 88-136 (224)
65 3kjh_A CO dehydrogenase/acetyl 94.0 0.14 4.8E-06 49.0 8.3 39 1-42 1-39 (254)
66 3ej6_A Catalase-3; heme, hydro 94.0 0.15 5.2E-06 58.0 9.6 96 297-405 537-644 (688)
67 3gra_A Transcriptional regulat 93.8 0.072 2.5E-06 51.2 5.9 47 360-406 69-116 (202)
68 3ea0_A ATPase, para family; al 93.8 0.11 3.7E-06 50.0 7.1 41 1-42 4-45 (245)
69 4e08_A DJ-1 beta; flavodoxin-l 93.6 0.034 1.2E-06 52.5 3.0 46 361-406 66-115 (190)
70 3cio_A ETK, tyrosine-protein k 93.5 0.17 5.7E-06 51.6 8.3 154 1-218 104-275 (299)
71 2g0t_A Conserved hypothetical 93.5 0.1 3.4E-06 55.0 6.7 41 1-42 169-209 (350)
72 1rw7_A YDR533CP; alpha-beta sa 93.2 0.031 1.1E-06 55.2 2.2 45 361-405 97-145 (243)
73 3noq_A THIJ/PFPI family protei 93.0 0.082 2.8E-06 52.0 4.9 46 360-405 63-111 (231)
74 3n7t_A Macrophage binding prot 93.0 0.042 1.4E-06 55.0 2.7 45 361-405 104-152 (247)
75 3dm5_A SRP54, signal recogniti 92.9 0.49 1.7E-05 51.3 11.1 40 2-43 101-140 (443)
76 3kl4_A SRP54, signal recogniti 92.8 1.1 3.6E-05 48.5 13.6 39 2-42 98-136 (433)
77 3kkl_A Probable chaperone prot 92.7 0.047 1.6E-06 54.5 2.6 45 361-405 97-145 (244)
78 3ttv_A Catalase HPII; heme ori 92.6 0.11 3.7E-06 59.6 5.7 100 297-405 600-706 (753)
79 2iuf_A Catalase; oxidoreductas 92.3 0.27 9.2E-06 56.1 8.4 96 297-405 529-646 (688)
80 3uk7_A Class I glutamine amido 92.0 0.11 3.9E-06 54.7 4.6 46 361-406 281-329 (396)
81 3mgk_A Intracellular protease/ 91.6 0.08 2.7E-06 51.3 2.7 45 361-405 64-111 (211)
82 3end_A Light-independent proto 91.4 0.26 8.9E-06 49.6 6.4 43 1-45 41-83 (307)
83 3uk7_A Class I glutamine amido 91.0 0.15 5.1E-06 53.8 4.2 46 361-406 88-136 (396)
84 1n57_A Chaperone HSP31, protei 90.9 0.081 2.8E-06 54.0 2.0 46 360-405 143-192 (291)
85 3ot1_A 4-methyl-5(B-hydroxyeth 90.8 0.069 2.4E-06 51.4 1.4 98 298-405 10-119 (208)
86 3ewn_A THIJ/PFPI family protei 90.3 0.17 5.9E-06 50.6 3.8 44 362-405 84-131 (253)
87 3fse_A Two-domain protein cont 90.2 0.17 5.9E-06 53.5 3.8 101 297-405 10-119 (365)
88 3fkq_A NTRC-like two-domain pr 89.7 2.1 7.2E-05 44.6 11.8 44 1-45 143-186 (373)
89 2ffh_A Protein (FFH); SRP54, s 89.7 2.8 9.5E-05 45.1 12.8 40 2-43 99-138 (425)
90 3q9l_A Septum site-determining 88.8 0.55 1.9E-05 45.4 6.0 40 1-41 2-41 (260)
91 1np6_A Molybdopterin-guanine d 88.8 0.52 1.8E-05 44.4 5.6 44 1-46 6-50 (174)
92 1g3q_A MIND ATPase, cell divis 88.7 0.58 2E-05 44.6 6.0 41 1-42 2-42 (237)
93 1sy7_A Catalase 1; heme oxidat 88.6 0.65 2.2E-05 53.3 7.3 102 298-407 535-644 (715)
94 1ihu_A Arsenical pump-driving 88.5 0.36 1.2E-05 53.5 5.0 41 4-45 329-369 (589)
95 3k9g_A PF-32 protein; ssgcid, 87.0 0.71 2.4E-05 45.2 5.6 42 1-44 27-68 (267)
96 2afh_E Nitrogenase iron protei 86.1 0.91 3.1E-05 45.1 5.9 42 1-44 2-43 (289)
97 1cp2_A CP2, nitrogenase iron p 86.1 0.84 2.9E-05 44.5 5.6 42 1-44 1-42 (269)
98 3zq6_A Putative arsenical pump 84.8 0.75 2.6E-05 47.1 4.7 41 1-42 13-53 (324)
99 3fwy_A Light-independent proto 84.6 1.3 4.4E-05 45.6 6.3 44 1-46 48-91 (314)
100 1wcv_1 SOJ, segregation protei 82.7 1.2 4.2E-05 43.4 5.0 43 1-44 6-48 (257)
101 3ug7_A Arsenical pump-driving 81.2 1.5 5.1E-05 45.5 5.3 41 1-42 25-65 (349)
102 3pg5_A Uncharacterized protein 81.1 1.5 5.2E-05 45.6 5.3 45 1-46 1-45 (361)
103 1nks_A Adenylate kinase; therm 81.0 1.1 3.8E-05 40.8 3.7 36 1-38 1-36 (194)
104 4gdh_A DJ-1, uncharacterized p 79.3 0.65 2.2E-05 44.2 1.6 45 360-404 71-120 (194)
105 1byi_A Dethiobiotin synthase; 78.8 2.4 8.1E-05 40.0 5.4 40 1-43 1-40 (224)
106 1ls1_A Signal recognition part 78.7 13 0.00044 37.5 11.2 40 2-43 99-138 (295)
107 3ez9_A Para; DNA binding, wing 78.7 2.1 7.1E-05 44.9 5.4 45 1-46 111-161 (403)
108 3bhn_A THIJ/PFPI domain protei 77.2 0.57 2E-05 46.3 0.6 44 360-405 78-126 (236)
109 3iqw_A Tail-anchored protein t 76.5 2.3 7.9E-05 44.1 4.9 40 2-43 17-56 (334)
110 3io3_A DEHA2D07832P; chaperone 76.0 2.4 8.1E-05 44.3 4.9 40 1-42 18-59 (348)
111 2oze_A ORF delta'; para, walke 75.8 2.4 8.2E-05 42.1 4.7 42 3-44 36-78 (298)
112 1z0s_A Probable inorganic poly 74.6 1.6 5.5E-05 44.4 3.1 72 297-400 29-100 (278)
113 1ihu_A Arsenical pump-driving 74.5 2.9 0.0001 46.1 5.4 40 1-42 8-47 (589)
114 3bfv_A CAPA1, CAPB2, membrane 73.6 4 0.00014 40.7 5.7 41 1-42 82-122 (271)
115 2f1r_A Molybdopterin-guanine d 72.7 2.5 8.7E-05 39.5 3.7 40 1-42 2-41 (171)
116 4b4o_A Epimerase family protei 72.4 3.6 0.00012 40.5 5.0 34 1-41 1-34 (298)
117 2obn_A Hypothetical protein; s 72.3 24 0.00081 37.0 11.4 152 1-221 152-311 (349)
118 2woo_A ATPase GET3; tail-ancho 72.3 2.9 0.0001 42.8 4.4 40 3-43 20-59 (329)
119 2woj_A ATPase GET3; tail-ancho 72.2 2.4 8.2E-05 44.1 3.8 42 2-44 18-61 (354)
120 2z0h_A DTMP kinase, thymidylat 71.9 4.5 0.00015 37.0 5.2 33 2-36 1-33 (197)
121 3cwq_A Para family chromosome 71.1 4 0.00014 38.7 4.8 40 3-44 2-41 (209)
122 3ksm_A ABC-type sugar transpor 70.2 16 0.00055 34.6 9.0 86 298-397 1-90 (276)
123 1gtv_A TMK, thymidylate kinase 69.1 1.9 6.5E-05 40.2 2.0 36 2-39 1-36 (214)
124 3guy_A Short-chain dehydrogena 69.1 2.4 8.3E-05 40.3 2.8 34 1-40 1-34 (230)
125 1zu4_A FTSY; GTPase, signal re 64.2 8.9 0.0003 39.3 6.0 39 2-42 106-144 (320)
126 8abp_A L-arabinose-binding pro 62.9 28 0.00095 33.6 9.2 84 297-397 2-88 (306)
127 2oyn_A Hypothetical protein MJ 62.7 2.7 9.4E-05 38.9 1.6 41 2-42 5-53 (146)
128 2v3c_C SRP54, signal recogniti 62.7 4.2 0.00014 43.7 3.4 40 2-43 100-139 (432)
129 3l49_A ABC sugar (ribose) tran 62.2 36 0.0012 32.6 9.8 86 296-397 4-92 (291)
130 3pfn_A NAD kinase; structural 61.9 5.3 0.00018 42.2 3.9 90 298-400 39-141 (365)
131 3la6_A Tyrosine-protein kinase 61.4 8 0.00027 38.9 5.0 40 2-42 93-132 (286)
132 1fjh_A 3alpha-hydroxysteroid d 61.0 6.1 0.00021 37.9 3.9 34 1-40 1-34 (257)
133 1zmt_A Haloalcohol dehalogenas 60.9 5.8 0.0002 38.4 3.8 31 1-37 1-31 (254)
134 1vma_A Cell division protein F 59.2 13 0.00043 38.0 6.1 40 2-43 105-144 (306)
135 2pbr_A DTMP kinase, thymidylat 59.0 11 0.00036 34.2 5.0 34 2-37 1-34 (195)
136 3gbv_A Putative LACI-family tr 58.5 43 0.0015 32.1 9.6 90 296-397 7-100 (304)
137 3l6u_A ABC-type sugar transpor 58.2 44 0.0015 31.9 9.6 86 296-397 7-95 (293)
138 2px0_A Flagellar biosynthesis 57.1 11 0.00036 38.2 5.0 38 3-42 107-145 (296)
139 1rz3_A Hypothetical protein rb 56.0 14 0.00046 34.5 5.3 40 2-43 23-62 (201)
140 3rot_A ABC sugar transporter, 55.5 49 0.0017 32.0 9.5 87 297-397 3-92 (297)
141 3jy6_A Transcriptional regulat 55.5 53 0.0018 31.3 9.7 84 296-398 6-92 (276)
142 1eiw_A Hypothetical protein MT 55.3 8.7 0.0003 33.8 3.5 39 359-397 35-73 (111)
143 4fyk_A Deoxyribonucleoside 5'- 55.2 25 0.00087 32.5 6.8 94 298-399 3-102 (152)
144 3ez2_A Plasmid partition prote 55.2 14 0.00049 38.3 5.8 43 1-44 108-156 (398)
145 1u0t_A Inorganic polyphosphate 54.6 10 0.00035 38.5 4.5 94 298-400 5-108 (307)
146 3g1w_A Sugar ABC transporter; 54.5 54 0.0018 31.6 9.6 86 297-397 4-92 (305)
147 3a4m_A L-seryl-tRNA(SEC) kinas 54.3 11 0.00037 36.9 4.5 39 1-41 4-42 (260)
148 1j8m_F SRP54, signal recogniti 54.0 15 0.00052 37.1 5.6 40 2-43 99-138 (297)
149 1nn5_A Similar to deoxythymidy 53.4 14 0.00047 34.1 4.8 34 2-37 10-43 (215)
150 3uug_A Multiple sugar-binding 53.3 50 0.0017 32.3 9.2 85 297-397 3-90 (330)
151 3ff4_A Uncharacterized protein 52.5 13 0.00044 33.0 4.2 38 361-404 81-118 (122)
152 3l77_A Short-chain alcohol deh 51.9 9.5 0.00032 36.1 3.5 32 1-38 2-33 (235)
153 2rgy_A Transcriptional regulat 51.8 67 0.0023 30.9 9.8 32 361-398 66-97 (290)
154 3k4h_A Putative transcriptiona 51.5 52 0.0018 31.4 8.9 31 361-397 68-98 (292)
155 4edh_A DTMP kinase, thymidylat 51.5 17 0.00057 34.9 5.2 35 2-38 7-41 (213)
156 3kts_A Glycerol uptake operon 51.2 13 0.00045 35.8 4.3 78 112-216 11-88 (192)
157 3qk7_A Transcriptional regulat 50.2 43 0.0015 32.4 8.1 85 296-397 5-94 (294)
158 3igf_A ALL4481 protein; two-do 50.2 13 0.00046 39.0 4.6 39 1-42 2-40 (374)
159 2j37_W Signal recognition part 49.4 20 0.00068 39.3 6.0 40 2-43 102-141 (504)
160 4e4y_A Short chain dehydrogena 48.9 8.9 0.00031 36.7 2.8 35 1-40 4-38 (244)
161 3d02_A Putative LACI-type tran 48.8 81 0.0028 30.2 9.8 88 296-398 3-93 (303)
162 3gv0_A Transcriptional regulat 48.3 51 0.0018 31.7 8.3 86 296-397 7-95 (288)
163 1kht_A Adenylate kinase; phosp 48.1 16 0.00054 32.9 4.3 34 2-37 4-37 (192)
164 3o74_A Fructose transport syst 48.1 94 0.0032 29.1 10.0 83 298-397 3-88 (272)
165 3llv_A Exopolyphosphatase-rela 48.0 13 0.00043 32.4 3.5 33 2-41 7-39 (141)
166 3l6e_A Oxidoreductase, short-c 47.8 12 0.00041 35.9 3.5 33 1-39 3-35 (235)
167 2ph3_A 3-oxoacyl-[acyl carrier 47.8 10 0.00034 35.9 2.9 31 1-37 1-31 (245)
168 3o1i_D Periplasmic protein TOR 47.6 42 0.0014 32.2 7.5 87 296-397 4-93 (304)
169 2fn9_A Ribose ABC transporter, 47.2 93 0.0032 29.6 9.9 33 361-397 57-89 (290)
170 3h2s_A Putative NADH-flavin re 47.0 18 0.00063 33.4 4.6 34 1-41 1-34 (224)
171 2fep_A Catabolite control prot 47.0 94 0.0032 29.8 10.0 32 361-398 71-102 (289)
172 3ew7_A LMO0794 protein; Q8Y8U8 46.9 21 0.00072 32.7 5.0 34 1-41 1-34 (221)
173 3kb2_A SPBC2 prophage-derived 46.8 14 0.00047 32.7 3.5 25 1-27 1-25 (173)
174 1zmo_A Halohydrin dehalogenase 46.7 14 0.00048 35.4 3.8 31 1-37 1-31 (244)
175 2i2c_A Probable inorganic poly 46.2 8.2 0.00028 38.6 2.1 36 361-401 34-71 (272)
176 1p3d_A UDP-N-acetylmuramate--a 45.4 22 0.00075 38.1 5.5 57 2-64 119-175 (475)
177 2x5o_A UDP-N-acetylmuramoylala 45.4 25 0.00087 37.2 5.9 55 2-70 105-164 (439)
178 3bos_A Putative DNA replicatio 45.1 34 0.0012 31.6 6.2 59 3-63 54-112 (242)
179 2wwf_A Thymidilate kinase, put 45.0 22 0.00076 32.6 4.8 34 2-37 11-44 (212)
180 3i4f_A 3-oxoacyl-[acyl-carrier 44.7 13 0.00045 35.8 3.3 31 1-37 7-37 (264)
181 3m9w_A D-xylose-binding peripl 44.4 69 0.0024 31.1 8.6 33 361-397 57-89 (313)
182 2an1_A Putative kinase; struct 44.4 15 0.00053 36.6 3.8 89 298-400 6-96 (292)
183 3uce_A Dehydrogenase; rossmann 44.2 11 0.00038 35.5 2.6 33 2-40 7-39 (223)
184 2yvu_A Probable adenylyl-sulfa 44.0 21 0.00073 32.4 4.5 39 2-42 14-52 (186)
185 3orf_A Dihydropteridine reduct 43.4 17 0.00058 35.0 3.9 34 2-41 23-56 (251)
186 2h3h_A Sugar ABC transporter, 43.4 86 0.0029 30.4 9.1 34 361-398 56-89 (313)
187 1j6u_A UDP-N-acetylmuramate-al 43.2 31 0.001 37.0 6.2 38 2-44 115-152 (469)
188 2f00_A UDP-N-acetylmuramate--L 43.1 25 0.00085 37.9 5.5 57 2-64 120-176 (491)
189 1w78_A FOLC bifunctional prote 42.8 24 0.00083 37.0 5.2 32 2-37 50-81 (422)
190 3sho_A Transcriptional regulat 42.5 1.9E+02 0.0065 26.0 10.9 93 282-399 27-122 (187)
191 3hp4_A GDSL-esterase; psychrot 42.3 33 0.0011 30.5 5.4 81 91-181 21-110 (185)
192 3ged_A Short-chain dehydrogena 41.7 16 0.00054 36.1 3.4 33 2-40 3-35 (247)
193 4f67_A UPF0176 protein LPG2838 41.6 15 0.00052 36.9 3.2 62 2-71 183-247 (265)
194 2jah_A Clavulanic acid dehydro 41.4 16 0.00056 35.0 3.4 31 2-38 8-38 (247)
195 1jbw_A Folylpolyglutamate synt 41.1 24 0.00082 37.2 4.9 32 2-37 40-71 (428)
196 3h7a_A Short chain dehydrogena 40.9 18 0.00063 34.9 3.7 32 2-39 8-39 (252)
197 3e03_A Short chain dehydrogena 40.8 19 0.00064 35.3 3.7 31 2-38 7-37 (274)
198 3i1j_A Oxidoreductase, short c 40.6 16 0.00056 34.6 3.2 32 2-39 15-46 (247)
199 4hf7_A Putative acylhydrolase; 40.4 30 0.001 32.1 5.0 61 118-186 63-130 (209)
200 3huu_A Transcription regulator 40.4 70 0.0024 31.0 7.9 31 361-397 82-112 (305)
201 3vtz_A Glucose 1-dehydrogenase 40.0 19 0.00064 35.3 3.6 33 2-40 15-47 (269)
202 3brs_A Periplasmic binding pro 40.0 57 0.002 31.0 7.1 33 361-397 64-96 (289)
203 3o26_A Salutaridine reductase; 39.9 17 0.00057 35.5 3.2 32 2-39 13-44 (311)
204 3clk_A Transcription regulator 39.9 56 0.0019 31.4 7.0 85 296-398 7-95 (290)
205 2fvy_A D-galactose-binding per 39.9 1.5E+02 0.0051 28.3 10.2 34 361-398 58-91 (309)
206 3tpc_A Short chain alcohol deh 39.1 21 0.00071 34.4 3.7 32 2-39 8-39 (257)
207 3bbl_A Regulatory protein of L 39.1 1E+02 0.0034 29.5 8.8 32 361-398 63-94 (287)
208 2x7x_A Sensor protein; transfe 39.0 1.7E+02 0.0058 28.6 10.6 85 296-397 5-93 (325)
209 3zv4_A CIS-2,3-dihydrobiphenyl 38.9 18 0.00063 35.5 3.4 30 2-37 6-35 (281)
210 3d8u_A PURR transcriptional re 38.9 72 0.0025 30.1 7.5 31 361-397 58-88 (275)
211 3tb6_A Arabinose metabolism tr 38.7 1.3E+02 0.0046 28.4 9.5 87 298-397 16-105 (298)
212 3lv8_A DTMP kinase, thymidylat 38.5 30 0.001 33.8 4.8 35 2-38 28-63 (236)
213 3e61_A Putative transcriptiona 38.4 69 0.0024 30.3 7.4 81 297-397 8-92 (277)
214 3asu_A Short-chain dehydrogena 38.4 24 0.00081 34.0 4.0 31 2-38 1-31 (248)
215 3t4x_A Oxidoreductase, short c 38.3 18 0.00061 35.2 3.1 32 2-39 11-42 (267)
216 3egc_A Putative ribose operon 38.3 54 0.0018 31.4 6.6 84 296-397 7-93 (291)
217 3gvc_A Oxidoreductase, probabl 38.3 21 0.00072 35.2 3.7 31 2-38 30-60 (277)
218 3p19_A BFPVVD8, putative blue 38.2 19 0.00066 35.2 3.4 31 2-38 17-47 (266)
219 3rwb_A TPLDH, pyridoxal 4-dehy 38.1 18 0.00061 34.8 3.1 30 2-37 7-36 (247)
220 2dkn_A 3-alpha-hydroxysteroid 38.1 31 0.0011 32.4 4.8 34 1-40 1-34 (255)
221 3lf2_A Short chain oxidoreduct 38.1 19 0.00067 34.9 3.4 32 2-39 9-40 (265)
222 1wma_A Carbonyl reductase [NAD 38.0 21 0.00074 33.9 3.6 34 1-40 4-38 (276)
223 2ekp_A 2-deoxy-D-gluconate 3-d 38.0 23 0.0008 33.6 3.9 33 2-40 3-35 (239)
224 3nrs_A Dihydrofolate:folylpoly 38.0 26 0.00088 37.2 4.6 31 2-36 53-83 (437)
225 3nyw_A Putative oxidoreductase 37.7 17 0.00059 35.0 2.9 32 2-39 8-39 (250)
226 2hq1_A Glucose/ribitol dehydro 37.7 20 0.00067 33.9 3.2 30 2-37 6-35 (247)
227 3pxx_A Carveol dehydrogenase; 37.3 20 0.00069 34.8 3.3 33 2-40 11-43 (287)
228 3ppi_A 3-hydroxyacyl-COA dehyd 37.2 23 0.00077 34.5 3.7 32 2-39 31-62 (281)
229 4imr_A 3-oxoacyl-(acyl-carrier 37.1 21 0.00073 35.0 3.5 30 2-37 34-63 (275)
230 1o5z_A Folylpolyglutamate synt 37.1 29 0.00099 36.9 4.8 32 2-37 53-84 (442)
231 4dmm_A 3-oxoacyl-[acyl-carrier 37.1 19 0.00065 35.2 3.1 29 2-36 29-57 (269)
232 2dtx_A Glucose 1-dehydrogenase 37.0 23 0.0008 34.4 3.8 34 2-41 9-42 (264)
233 3m1a_A Putative dehydrogenase; 37.0 22 0.00075 34.5 3.6 32 1-38 5-36 (281)
234 3cs3_A Sugar-binding transcrip 36.9 99 0.0034 29.3 8.3 79 296-397 7-86 (277)
235 3lyl_A 3-oxoacyl-(acyl-carrier 36.9 20 0.0007 34.0 3.2 31 2-38 6-36 (247)
236 2d1y_A Hypothetical protein TT 36.8 24 0.0008 34.0 3.7 33 2-40 7-39 (256)
237 3ezl_A Acetoacetyl-COA reducta 36.8 20 0.00068 34.3 3.2 29 2-36 14-42 (256)
238 4e3z_A Putative oxidoreductase 36.7 20 0.00069 34.8 3.2 30 1-36 26-55 (272)
239 2fwm_X 2,3-dihydro-2,3-dihydro 36.6 24 0.00082 33.8 3.7 34 2-41 8-41 (250)
240 2cfc_A 2-(R)-hydroxypropyl-COM 36.5 23 0.00077 33.5 3.5 31 2-38 3-33 (250)
241 3f9i_A 3-oxoacyl-[acyl-carrier 36.5 20 0.00068 34.1 3.1 31 2-38 15-45 (249)
242 1vi6_A 30S ribosomal protein S 36.5 1.5E+02 0.0052 28.7 9.3 79 296-398 67-145 (208)
243 4b79_A PA4098, probable short- 36.0 25 0.00084 34.8 3.7 33 2-40 12-44 (242)
244 2pjk_A 178AA long hypothetical 36.0 44 0.0015 31.3 5.3 47 111-166 59-106 (178)
245 4eso_A Putative oxidoreductase 35.9 22 0.00075 34.4 3.3 32 2-39 9-40 (255)
246 3tsc_A Putative oxidoreductase 35.9 22 0.00076 34.7 3.4 31 2-38 12-42 (277)
247 3tfo_A Putative 3-oxoacyl-(acy 35.8 21 0.00072 35.0 3.2 32 2-39 5-36 (264)
248 4a0g_A Adenosylmethionine-8-am 35.8 28 0.00097 40.3 4.7 36 2-38 35-75 (831)
249 1ooe_A Dihydropteridine reduct 35.7 26 0.0009 33.1 3.8 34 2-41 4-37 (236)
250 2p67_A LAO/AO transport system 35.7 1.4E+02 0.0049 30.1 9.6 40 2-43 57-96 (341)
251 4tmk_A Protein (thymidylate ki 35.5 37 0.0013 32.6 4.8 33 2-36 4-37 (213)
252 1g5t_A COB(I)alamin adenosyltr 35.4 20 0.0007 34.4 2.9 29 13-41 36-66 (196)
253 3p32_A Probable GTPase RV1496/ 35.4 48 0.0017 33.9 6.0 41 3-45 81-121 (355)
254 3op4_A 3-oxoacyl-[acyl-carrier 35.4 22 0.00076 34.2 3.2 30 2-37 10-39 (248)
255 4iiu_A 3-oxoacyl-[acyl-carrier 35.3 22 0.00076 34.4 3.3 29 2-36 27-55 (267)
256 1vl8_A Gluconate 5-dehydrogena 35.3 23 0.00078 34.5 3.3 31 2-38 22-52 (267)
257 2ew8_A (S)-1-phenylethanol deh 35.2 26 0.00089 33.5 3.7 32 2-39 8-39 (249)
258 4e5v_A Putative THUA-like prot 35.0 1.4E+02 0.0048 29.9 9.2 89 296-401 3-96 (281)
259 3oid_A Enoyl-[acyl-carrier-pro 35.0 22 0.00077 34.4 3.2 29 2-36 5-33 (258)
260 3s55_A Putative short-chain de 34.9 23 0.00079 34.5 3.3 33 2-40 11-43 (281)
261 3ai3_A NADPH-sorbose reductase 34.9 24 0.00081 34.0 3.4 31 2-38 8-38 (263)
262 3a28_C L-2.3-butanediol dehydr 34.9 22 0.00076 34.2 3.2 31 2-38 3-33 (258)
263 3tzq_B Short-chain type dehydr 34.8 26 0.0009 34.1 3.7 32 2-39 12-43 (271)
264 3tl3_A Short-chain type dehydr 34.6 21 0.00071 34.4 2.9 30 2-37 10-39 (257)
265 2vk2_A YTFQ, ABC transporter p 34.6 1.5E+02 0.0051 28.6 9.2 33 361-397 57-89 (306)
266 3dqp_A Oxidoreductase YLBE; al 34.5 34 0.0012 31.7 4.3 34 1-41 1-34 (219)
267 3pk0_A Short-chain dehydrogena 34.4 22 0.00077 34.4 3.1 32 2-39 11-42 (262)
268 3h75_A Periplasmic sugar-bindi 34.4 76 0.0026 31.5 7.2 85 297-398 3-93 (350)
269 3f1l_A Uncharacterized oxidore 34.4 24 0.00083 33.9 3.4 31 2-38 13-43 (252)
270 2plr_A DTMP kinase, probable t 34.3 41 0.0014 30.6 4.8 30 2-34 5-34 (213)
271 2rhc_B Actinorhodin polyketide 34.2 24 0.00083 34.5 3.3 32 2-39 23-54 (277)
272 2o20_A Catabolite control prot 34.1 1.5E+02 0.0053 29.0 9.4 84 296-397 62-148 (332)
273 3dii_A Short-chain dehydrogena 34.1 26 0.00089 33.6 3.5 32 2-39 3-34 (247)
274 2rjo_A Twin-arginine transloca 33.9 1.2E+02 0.004 29.8 8.5 33 361-397 60-94 (332)
275 3qiv_A Short-chain dehydrogena 33.9 25 0.00086 33.5 3.3 31 2-38 10-40 (253)
276 3ksu_A 3-oxoacyl-acyl carrier 33.9 20 0.0007 34.8 2.7 30 2-37 12-41 (262)
277 2nwq_A Probable short-chain de 33.9 31 0.0011 33.8 4.1 33 2-40 22-54 (272)
278 1mxh_A Pteridine reductase 2; 33.8 23 0.00079 34.3 3.1 30 2-37 12-41 (276)
279 1e7w_A Pteridine reductase; di 33.8 23 0.00078 35.0 3.1 31 2-38 10-40 (291)
280 3ioy_A Short-chain dehydrogena 33.8 29 0.00099 34.9 3.9 32 2-39 9-40 (319)
281 4dqx_A Probable oxidoreductase 33.8 25 0.00084 34.6 3.3 31 2-38 28-58 (277)
282 3icc_A Putative 3-oxoacyl-(acy 33.7 24 0.00081 33.6 3.1 29 2-36 8-36 (255)
283 3ijr_A Oxidoreductase, short c 33.7 28 0.00095 34.4 3.7 32 2-39 48-79 (291)
284 1e6c_A Shikimate kinase; phosp 33.7 25 0.00084 31.2 3.1 25 1-27 2-26 (173)
285 1iy8_A Levodione reductase; ox 33.7 25 0.00086 34.0 3.3 31 2-38 14-44 (267)
286 3gk3_A Acetoacetyl-COA reducta 33.6 22 0.00076 34.5 2.9 29 2-36 26-54 (269)
287 3t7c_A Carveol dehydrogenase; 33.6 25 0.00085 34.9 3.4 34 2-41 29-62 (299)
288 2iks_A DNA-binding transcripti 33.6 1.2E+02 0.0042 28.9 8.3 85 296-397 19-106 (293)
289 3uve_A Carveol dehydrogenase ( 33.5 25 0.00086 34.3 3.4 33 2-40 12-44 (286)
290 3r1i_A Short-chain type dehydr 33.5 28 0.00095 34.2 3.7 30 2-37 33-62 (276)
291 2ag5_A DHRS6, dehydrogenase/re 33.5 25 0.00085 33.6 3.2 33 2-40 7-39 (246)
292 3un1_A Probable oxidoreductase 33.5 29 0.00099 33.7 3.8 33 2-40 29-61 (260)
293 3tjr_A Short chain dehydrogena 33.4 25 0.00085 35.0 3.3 30 2-37 32-61 (301)
294 2qh8_A Uncharacterized protein 33.3 1.1E+02 0.0038 29.7 8.1 83 298-397 141-226 (302)
295 3ek2_A Enoyl-(acyl-carrier-pro 33.2 32 0.0011 32.9 4.0 31 2-37 15-46 (271)
296 2o23_A HADH2 protein; HSD17B10 33.1 30 0.001 33.0 3.7 32 2-39 13-44 (265)
297 3gem_A Short chain dehydrogena 33.1 22 0.00077 34.6 2.9 33 2-40 28-60 (260)
298 3sx2_A Putative 3-ketoacyl-(ac 33.0 26 0.0009 34.0 3.4 32 2-39 14-45 (278)
299 2ae2_A Protein (tropinone redu 33.0 26 0.00091 33.7 3.4 32 2-39 10-41 (260)
300 2wsb_A Galactitol dehydrogenas 33.0 27 0.00091 33.1 3.3 31 2-38 12-42 (254)
301 3v2g_A 3-oxoacyl-[acyl-carrier 33.0 26 0.00089 34.3 3.3 30 2-37 32-61 (271)
302 2qq5_A DHRS1, dehydrogenase/re 32.9 25 0.00087 33.8 3.2 31 2-38 6-36 (260)
303 3v9p_A DTMP kinase, thymidylat 32.8 35 0.0012 33.2 4.2 35 2-38 26-64 (227)
304 1spx_A Short-chain reductase f 32.8 24 0.00084 34.2 3.1 32 2-39 7-38 (278)
305 1h5q_A NADP-dependent mannitol 32.7 27 0.00094 33.2 3.4 30 2-37 15-44 (265)
306 3ftp_A 3-oxoacyl-[acyl-carrier 32.7 25 0.00085 34.4 3.1 30 2-37 29-58 (270)
307 3rd5_A Mypaa.01249.C; ssgcid, 32.6 27 0.00092 34.3 3.4 33 2-40 17-49 (291)
308 1vjn_A Zn-dependent hydrolase 32.5 45 0.0015 31.8 4.9 71 139-219 138-208 (220)
309 3o38_A Short chain dehydrogena 32.4 33 0.0011 33.0 3.9 33 2-39 23-55 (266)
310 1o5i_A 3-oxoacyl-(acyl carrier 32.3 28 0.00095 33.5 3.4 34 2-41 20-53 (249)
311 3brq_A HTH-type transcriptiona 32.3 1.3E+02 0.0045 28.4 8.3 31 361-397 76-107 (296)
312 1edo_A Beta-keto acyl carrier 32.3 26 0.00089 32.9 3.1 29 2-36 2-30 (244)
313 2uvd_A 3-oxoacyl-(acyl-carrier 32.3 26 0.00089 33.4 3.1 30 2-37 5-34 (246)
314 3imf_A Short chain dehydrogena 32.3 25 0.00087 33.9 3.1 31 2-38 7-37 (257)
315 4dry_A 3-oxoacyl-[acyl-carrier 32.3 25 0.00086 34.6 3.1 31 2-38 34-64 (281)
316 2hsg_A Glucose-resistance amyl 32.1 91 0.0031 30.6 7.3 84 296-397 59-145 (332)
317 3kjx_A Transcriptional regulat 32.0 2.1E+02 0.0072 28.1 10.0 84 296-397 67-153 (344)
318 3ak4_A NADH-dependent quinucli 31.9 28 0.00095 33.5 3.3 32 2-39 13-44 (263)
319 1uls_A Putative 3-oxoacyl-acyl 31.9 28 0.00097 33.2 3.4 32 2-39 6-37 (245)
320 2q2v_A Beta-D-hydroxybutyrate 31.8 29 0.00098 33.3 3.4 30 2-37 5-34 (255)
321 1geg_A Acetoin reductase; SDR 31.8 28 0.00097 33.4 3.3 31 2-38 3-33 (256)
322 2x9g_A PTR1, pteridine reducta 31.8 26 0.00088 34.4 3.1 32 2-39 24-55 (288)
323 1yo6_A Putative carbonyl reduc 31.7 28 0.00097 32.5 3.3 33 2-40 4-38 (250)
324 4e6p_A Probable sorbitol dehyd 31.5 29 0.00098 33.4 3.3 31 2-38 9-39 (259)
325 3uf0_A Short-chain dehydrogena 31.5 28 0.00097 34.1 3.3 30 2-37 32-61 (273)
326 3rkr_A Short chain oxidoreduct 31.5 28 0.00094 33.6 3.2 31 2-38 30-60 (262)
327 3osu_A 3-oxoacyl-[acyl-carrier 31.4 28 0.00096 33.2 3.2 29 2-36 5-33 (246)
328 1yde_A Retinal dehydrogenase/r 31.4 29 0.00098 33.9 3.3 32 2-39 10-41 (270)
329 4fn4_A Short chain dehydrogena 31.3 28 0.00097 34.4 3.3 32 2-39 8-39 (254)
330 2vos_A Folylpolyglutamate synt 31.3 42 0.0014 36.3 4.9 31 2-36 65-95 (487)
331 2z1n_A Dehydrogenase; reductas 31.3 29 0.001 33.4 3.3 31 2-38 8-38 (260)
332 2r8r_A Sensor protein; KDPD, P 31.2 39 0.0013 33.3 4.2 32 11-42 14-45 (228)
333 3ko8_A NAD-dependent epimerase 31.2 45 0.0016 32.4 4.8 33 1-40 1-33 (312)
334 3svt_A Short-chain type dehydr 31.2 29 0.00099 33.9 3.3 32 2-39 12-43 (281)
335 3v8b_A Putative dehydrogenase, 31.2 29 0.001 34.2 3.4 31 2-38 29-59 (283)
336 3tox_A Short chain dehydrogena 31.2 23 0.0008 34.9 2.7 31 2-38 9-39 (280)
337 3v2h_A D-beta-hydroxybutyrate 31.1 30 0.001 34.0 3.5 29 2-36 26-54 (281)
338 3e3m_A Transcriptional regulat 31.0 1.6E+02 0.0056 29.2 9.0 31 361-397 125-155 (355)
339 4gkb_A 3-oxoacyl-[acyl-carrier 30.9 33 0.0011 33.9 3.7 30 2-37 8-37 (258)
340 3c3k_A Alanine racemase; struc 30.9 1.3E+02 0.0046 28.6 8.1 31 361-398 63-93 (285)
341 3sc4_A Short chain dehydrogena 30.9 30 0.001 34.0 3.4 33 2-40 10-42 (285)
342 4h15_A Short chain alcohol deh 30.8 28 0.00097 34.4 3.2 31 2-38 12-42 (261)
343 4iin_A 3-ketoacyl-acyl carrier 30.8 28 0.00096 33.8 3.1 30 2-37 30-59 (271)
344 3is3_A 17BETA-hydroxysteroid d 30.7 29 0.00098 33.7 3.2 29 2-36 19-47 (270)
345 4g81_D Putative hexonate dehyd 30.7 23 0.0008 35.1 2.6 30 2-37 10-39 (255)
346 3rih_A Short chain dehydrogena 30.7 30 0.001 34.4 3.4 33 2-40 42-74 (293)
347 2ptg_A Enoyl-acyl carrier redu 30.6 37 0.0013 33.9 4.0 32 2-38 10-42 (319)
348 1xu9_A Corticosteroid 11-beta- 30.5 29 0.001 33.9 3.2 32 2-39 29-60 (286)
349 3qlj_A Short chain dehydrogena 30.5 28 0.00094 34.9 3.1 30 2-37 28-57 (322)
350 3edm_A Short chain dehydrogena 30.5 31 0.001 33.4 3.3 30 2-37 9-38 (259)
351 4hp8_A 2-deoxy-D-gluconate 3-d 30.4 32 0.0011 34.0 3.5 30 2-37 10-39 (247)
352 1uay_A Type II 3-hydroxyacyl-C 30.3 33 0.0011 32.0 3.5 34 2-41 3-36 (242)
353 3ucx_A Short chain dehydrogena 30.2 37 0.0013 32.8 3.9 31 2-38 12-42 (264)
354 3lkv_A Uncharacterized conserv 30.2 1.3E+02 0.0044 29.6 8.0 98 282-398 127-227 (302)
355 1orr_A CDP-tyvelose-2-epimeras 30.2 41 0.0014 33.2 4.3 31 1-37 1-31 (347)
356 3dhn_A NAD-dependent epimerase 30.1 49 0.0017 30.5 4.6 35 1-41 4-38 (227)
357 1di6_A MOGA, molybdenum cofact 30.0 67 0.0023 30.6 5.6 32 362-393 66-97 (195)
358 3sju_A Keto reductase; short-c 30.0 31 0.0011 33.8 3.4 31 2-38 25-55 (279)
359 4eyg_A Twin-arginine transloca 30.0 2.2E+02 0.0076 27.8 9.8 91 295-398 4-103 (368)
360 3uxy_A Short-chain dehydrogena 30.0 28 0.00096 34.0 3.0 30 2-37 29-58 (266)
361 1uzm_A 3-oxoacyl-[acyl-carrier 29.9 34 0.0011 32.8 3.5 33 2-40 16-48 (247)
362 3lkv_A Uncharacterized conserv 29.9 76 0.0026 31.3 6.2 67 295-370 6-77 (302)
363 2pez_A Bifunctional 3'-phospho 29.7 67 0.0023 28.8 5.3 33 2-36 6-38 (179)
364 2gk3_A Putative cytoplasmic pr 29.4 26 0.00091 34.5 2.7 40 358-397 73-124 (256)
365 1x1t_A D(-)-3-hydroxybutyrate 29.4 32 0.0011 33.0 3.3 30 2-37 5-34 (260)
366 2zat_A Dehydrogenase/reductase 29.4 32 0.0011 33.0 3.2 31 2-38 15-45 (260)
367 1uj2_A Uridine-cytidine kinase 29.4 46 0.0016 32.0 4.4 25 1-27 22-46 (252)
368 2v54_A DTMP kinase, thymidylat 29.4 30 0.001 31.5 3.0 31 2-36 5-35 (204)
369 1sny_A Sniffer CG10964-PA; alp 29.3 33 0.0011 32.8 3.3 34 1-40 21-57 (267)
370 1ae1_A Tropinone reductase-I; 29.2 33 0.0011 33.3 3.4 31 2-38 22-52 (273)
371 1yb1_A 17-beta-hydroxysteroid 29.2 33 0.0011 33.3 3.3 32 2-39 32-63 (272)
372 2h7i_A Enoyl-[acyl-carrier-pro 29.2 46 0.0016 32.2 4.4 32 2-38 8-40 (269)
373 3k9c_A Transcriptional regulat 29.1 69 0.0024 30.8 5.7 81 296-397 11-94 (289)
374 3oec_A Carveol dehydrogenase ( 29.1 31 0.0011 34.5 3.2 31 2-38 47-77 (317)
375 3bil_A Probable LACI-family tr 29.0 96 0.0033 30.9 6.9 31 361-397 121-151 (348)
376 1jx6_A LUXP protein; protein-l 29.0 2.3E+02 0.0077 27.7 9.6 91 295-397 41-134 (342)
377 1xhl_A Short-chain dehydrogena 28.8 31 0.0011 34.2 3.1 32 2-39 27-58 (297)
378 1hdc_A 3-alpha, 20 beta-hydrox 28.8 33 0.0011 33.0 3.2 31 2-38 6-36 (254)
379 4ibo_A Gluconate dehydrogenase 28.8 27 0.00091 34.2 2.6 30 2-37 27-56 (271)
380 1odf_A YGR205W, hypothetical 3 28.8 42 0.0014 33.7 4.1 40 2-43 32-74 (290)
381 3ld9_A DTMP kinase, thymidylat 28.7 57 0.0019 31.6 4.9 33 2-36 22-55 (223)
382 3pzy_A MOG; ssgcid, seattle st 28.6 51 0.0017 30.4 4.3 45 111-166 46-91 (164)
383 1gz6_A Estradiol 17 beta-dehyd 28.5 29 0.001 35.0 2.9 30 2-37 10-39 (319)
384 1zem_A Xylitol dehydrogenase; 28.5 35 0.0012 32.9 3.3 31 2-38 8-38 (262)
385 3kke_A LACI family transcripti 28.5 2E+02 0.0067 27.7 8.9 31 361-397 70-100 (303)
386 1uf9_A TT1252 protein; P-loop, 28.4 43 0.0015 30.4 3.8 27 1-33 8-34 (203)
387 2c07_A 3-oxoacyl-(acyl-carrier 28.4 28 0.00097 34.0 2.7 31 2-38 45-75 (285)
388 4eaq_A DTMP kinase, thymidylat 28.4 52 0.0018 31.5 4.6 31 2-35 27-57 (229)
389 3nrc_A Enoyl-[acyl-carrier-pro 28.4 47 0.0016 32.4 4.3 34 2-40 27-61 (280)
390 2h0a_A TTHA0807, transcription 28.3 70 0.0024 30.2 5.5 32 361-398 54-85 (276)
391 3cxt_A Dehydrogenase with diff 28.2 35 0.0012 33.8 3.4 30 2-37 35-64 (291)
392 3pgx_A Carveol dehydrogenase; 28.1 36 0.0012 33.2 3.4 32 2-39 16-47 (280)
393 3u5t_A 3-oxoacyl-[acyl-carrier 28.0 31 0.0011 33.6 2.9 29 2-36 28-56 (267)
394 3r3s_A Oxidoreductase; structu 28.0 35 0.0012 33.7 3.3 30 2-37 50-79 (294)
395 1nff_A Putative oxidoreductase 27.9 36 0.0012 32.9 3.3 31 2-38 8-38 (260)
396 1ja9_A 4HNR, 1,3,6,8-tetrahydr 27.9 34 0.0012 32.7 3.1 30 2-37 22-51 (274)
397 3dbi_A Sugar-binding transcrip 27.8 2.3E+02 0.008 27.6 9.5 87 296-397 60-149 (338)
398 1sby_A Alcohol dehydrogenase; 27.8 39 0.0013 32.2 3.6 31 2-38 6-37 (254)
399 2nm0_A Probable 3-oxacyl-(acyl 27.8 43 0.0015 32.3 3.9 33 2-40 22-54 (253)
400 2ioy_A Periplasmic sugar-bindi 27.8 2.7E+02 0.0092 26.3 9.7 33 361-397 56-88 (283)
401 4da9_A Short-chain dehydrogena 27.7 36 0.0012 33.4 3.3 30 2-37 30-59 (280)
402 4fc7_A Peroxisomal 2,4-dienoyl 27.7 33 0.0011 33.5 3.0 30 2-37 28-57 (277)
403 2b4q_A Rhamnolipids biosynthes 27.7 33 0.0011 33.6 3.1 30 2-37 30-59 (276)
404 4fgs_A Probable dehydrogenase 27.6 36 0.0012 34.1 3.4 31 2-38 30-60 (273)
405 1t0b_A THUA-like protein; treh 27.6 89 0.0031 30.8 6.2 43 358-400 63-106 (252)
406 1gee_A Glucose 1-dehydrogenase 27.5 36 0.0012 32.4 3.2 30 2-37 8-37 (261)
407 3bch_A 40S ribosomal protein S 27.5 2.1E+02 0.0071 28.6 8.8 79 296-398 103-181 (253)
408 3grp_A 3-oxoacyl-(acyl carrier 27.5 35 0.0012 33.2 3.2 30 2-37 28-57 (266)
409 4egf_A L-xylulose reductase; s 27.4 34 0.0012 33.2 3.1 32 2-39 21-52 (266)
410 2o2s_A Enoyl-acyl carrier redu 27.4 41 0.0014 33.5 3.8 33 2-39 10-43 (315)
411 3n74_A 3-ketoacyl-(acyl-carrie 27.4 38 0.0013 32.3 3.4 32 2-39 10-41 (261)
412 1g0o_A Trihydroxynaphthalene r 27.4 39 0.0013 33.0 3.5 30 2-37 30-59 (283)
413 1yxm_A Pecra, peroxisomal tran 27.3 37 0.0013 33.3 3.3 31 2-38 19-49 (303)
414 3ctm_A Carbonyl reductase; alc 27.3 41 0.0014 32.5 3.7 31 2-38 35-65 (279)
415 1hxh_A 3BETA/17BETA-hydroxyste 27.3 32 0.0011 33.0 2.8 30 2-37 7-36 (253)
416 2qhx_A Pteridine reductase 1; 27.3 34 0.0012 34.6 3.1 31 2-38 47-77 (328)
417 1zk4_A R-specific alcohol dehy 27.1 36 0.0012 32.1 3.1 32 2-39 7-38 (251)
418 1xq1_A Putative tropinone redu 27.0 36 0.0012 32.6 3.1 32 2-39 15-46 (266)
419 3s99_A Basic membrane lipoprot 27.0 1.6E+02 0.0056 30.3 8.3 66 295-370 24-94 (356)
420 3u9l_A 3-oxoacyl-[acyl-carrier 27.0 42 0.0014 33.9 3.7 30 2-37 6-35 (324)
421 1fmc_A 7 alpha-hydroxysteroid 26.8 33 0.0011 32.4 2.8 31 2-38 12-42 (255)
422 1e8c_A UDP-N-acetylmuramoylala 26.8 65 0.0022 34.6 5.4 33 2-38 109-141 (498)
423 3lkb_A Probable branched-chain 26.7 1.9E+02 0.0064 28.9 8.6 90 295-398 5-105 (392)
424 1m7g_A Adenylylsulfate kinase; 26.7 47 0.0016 30.8 3.8 37 2-40 26-63 (211)
425 1dbq_A Purine repressor; trans 26.6 2.1E+02 0.0073 26.9 8.7 84 296-397 6-93 (289)
426 2c20_A UDP-glucose 4-epimerase 26.5 59 0.002 31.8 4.7 32 1-38 1-32 (330)
427 2if2_A Dephospho-COA kinase; a 26.4 39 0.0013 31.0 3.1 23 1-25 1-23 (204)
428 2pd4_A Enoyl-[acyl-carrier-pro 26.3 50 0.0017 32.0 4.1 32 2-38 7-39 (275)
429 3hcw_A Maltose operon transcri 26.3 2E+02 0.0067 27.6 8.4 87 295-397 5-97 (295)
430 3afo_A NADH kinase POS5; alpha 26.2 29 0.00098 36.8 2.4 35 361-400 113-148 (388)
431 2a4k_A 3-oxoacyl-[acyl carrier 26.2 40 0.0014 32.7 3.4 31 2-38 7-37 (263)
432 3qvo_A NMRA family protein; st 26.1 56 0.0019 30.8 4.3 35 1-41 23-58 (236)
433 2bgk_A Rhizome secoisolaricire 26.0 41 0.0014 32.2 3.4 31 2-38 17-47 (278)
434 1xkq_A Short-chain reductase f 26.0 38 0.0013 33.0 3.1 31 2-38 7-37 (280)
435 2qt1_A Nicotinamide riboside k 25.8 39 0.0013 31.2 3.0 37 2-44 22-58 (207)
436 2p91_A Enoyl-[acyl-carrier-pro 25.7 55 0.0019 31.9 4.3 32 2-38 22-54 (285)
437 1usg_A Leucine-specific bindin 25.7 2.3E+02 0.008 27.3 8.9 33 361-398 68-100 (346)
438 1tjy_A Sugar transport protein 25.6 2.2E+02 0.0074 27.8 8.7 33 361-397 59-91 (316)
439 2p5y_A UDP-glucose 4-epimerase 25.6 56 0.0019 31.8 4.3 30 1-37 1-30 (311)
440 1y63_A LMAJ004144AAA protein; 25.5 43 0.0015 30.5 3.2 22 2-25 11-32 (184)
441 1qsg_A Enoyl-[acyl-carrier-pro 25.5 58 0.002 31.3 4.3 33 2-39 10-43 (265)
442 3rft_A Uronate dehydrogenase; 25.5 39 0.0013 32.6 3.1 35 1-41 3-37 (267)
443 3gaf_A 7-alpha-hydroxysteroid 25.4 36 0.0012 32.8 2.8 30 2-37 13-42 (256)
444 3rht_A (gatase1)-like protein; 25.4 2E+02 0.0067 28.6 8.3 81 298-397 5-85 (259)
445 4dyv_A Short-chain dehydrogena 25.3 39 0.0013 33.1 3.1 32 2-39 29-60 (272)
446 1a7j_A Phosphoribulokinase; tr 25.2 44 0.0015 33.5 3.5 41 2-44 6-46 (290)
447 1d7o_A Enoyl-[acyl-carrier pro 24.9 55 0.0019 32.1 4.1 35 2-41 9-44 (297)
448 1oaa_A Sepiapterin reductase; 24.8 43 0.0015 32.0 3.3 31 2-38 7-40 (259)
449 3d3q_A TRNA delta(2)-isopenten 24.7 82 0.0028 32.7 5.5 44 2-52 8-54 (340)
450 1gud_A ALBP, D-allose-binding 24.7 2.1E+02 0.0073 27.2 8.3 33 361-397 58-90 (288)
451 3d7l_A LIN1944 protein; APC893 24.4 72 0.0025 28.9 4.6 33 1-41 4-36 (202)
452 1w6u_A 2,4-dienoyl-COA reducta 24.4 45 0.0015 32.5 3.3 30 2-37 27-56 (302)
453 2f6r_A COA synthase, bifunctio 24.4 47 0.0016 32.9 3.5 34 1-42 75-108 (281)
454 1xx6_A Thymidine kinase; NESG, 24.3 74 0.0025 29.9 4.7 33 2-38 9-43 (191)
455 2qgz_A Helicase loader, putati 24.2 53 0.0018 33.0 3.9 62 2-65 153-224 (308)
456 2grj_A Dephospho-COA kinase; T 24.1 55 0.0019 30.7 3.8 26 3-34 14-40 (192)
457 2vfb_A Arylamine N-acetyltrans 24.1 87 0.003 31.4 5.4 52 22-73 76-132 (280)
458 4ag6_A VIRB4 ATPase, type IV s 23.9 74 0.0025 32.7 5.0 35 3-41 37-71 (392)
459 3r6d_A NAD-dependent epimerase 23.9 70 0.0024 29.5 4.4 34 1-40 5-39 (221)
460 2p2s_A Putative oxidoreductase 23.9 1.6E+02 0.0056 29.3 7.5 68 297-371 4-75 (336)
461 2wyu_A Enoyl-[acyl carrier pro 23.8 58 0.002 31.3 3.9 31 2-37 9-40 (261)
462 2dri_A D-ribose-binding protei 23.7 2.9E+02 0.0098 25.9 8.9 33 361-397 56-88 (271)
463 3kvo_A Hydroxysteroid dehydrog 23.7 47 0.0016 34.0 3.4 32 2-39 46-77 (346)
464 3p94_A GDSL-like lipase; serin 23.6 50 0.0017 29.6 3.3 46 138-185 73-125 (204)
465 1jtv_A 17 beta-hydroxysteroid 23.6 40 0.0014 34.0 2.9 30 2-37 3-32 (327)
466 1yrb_A ATP(GTP)binding protein 23.5 96 0.0033 29.3 5.4 38 4-44 17-54 (262)
467 3h5o_A Transcriptional regulat 23.5 2.5E+02 0.0084 27.5 8.7 31 361-397 117-147 (339)
468 4evq_A Putative ABC transporte 23.4 3.5E+02 0.012 26.4 9.8 91 295-398 14-113 (375)
469 3e48_A Putative nucleoside-dip 23.4 66 0.0023 30.9 4.3 34 1-41 1-35 (289)
470 3sg0_A Extracellular ligand-bi 23.3 4.1E+02 0.014 25.9 10.3 92 295-399 25-121 (386)
471 3oig_A Enoyl-[acyl-carrier-pro 23.2 62 0.0021 31.0 4.0 31 2-37 8-39 (266)
472 3u5c_A 40S ribosomal protein S 23.1 2.3E+02 0.0079 28.2 8.1 78 297-398 70-147 (252)
473 2ze6_A Isopentenyl transferase 23.1 1.1E+02 0.0036 29.7 5.7 45 1-52 1-48 (253)
474 2rh8_A Anthocyanidin reductase 22.9 80 0.0027 31.1 4.9 34 2-41 10-43 (338)
475 3snr_A Extracellular ligand-bi 22.8 3.9E+02 0.013 25.7 10.0 92 295-399 5-101 (362)
476 3hs3_A Ribose operon repressor 22.8 53 0.0018 31.4 3.4 79 296-397 9-91 (277)
477 2c29_D Dihydroflavonol 4-reduc 22.5 73 0.0025 31.4 4.5 34 2-41 6-39 (337)
478 2wtz_A UDP-N-acetylmuramoyl-L- 22.5 82 0.0028 34.3 5.2 33 2-38 147-179 (535)
479 2x4g_A Nucleoside-diphosphate- 22.5 84 0.0029 30.8 4.9 33 3-41 15-47 (342)
480 1w5r_A Arylamine N-acetyltrans 22.4 91 0.0031 31.2 5.2 52 22-73 79-135 (278)
481 3trf_A Shikimate kinase, SK; a 22.3 63 0.0021 28.9 3.6 25 1-27 5-29 (185)
482 3u3x_A Oxidoreductase; structu 22.3 70 0.0024 32.7 4.4 68 297-371 26-97 (361)
483 2pk3_A GDP-6-deoxy-D-LYXO-4-he 22.2 81 0.0028 30.7 4.7 35 1-41 12-46 (321)
484 1jjv_A Dephospho-COA kinase; P 22.0 68 0.0023 29.4 3.9 27 1-33 2-28 (206)
485 3gdg_A Probable NADP-dependent 21.9 58 0.002 31.1 3.5 31 2-37 21-52 (267)
486 2a6a_A Hypothetical protein TM 21.9 62 0.0021 31.3 3.7 45 360-405 64-110 (218)
487 4h08_A Putative hydrolase; GDS 21.6 68 0.0023 29.0 3.8 47 137-186 72-123 (200)
488 3eag_A UDP-N-acetylmuramate:L- 21.6 1.3E+02 0.0046 30.2 6.3 59 2-64 109-174 (326)
489 2gel_A Putative GRAM negative 21.4 1.1E+02 0.0037 29.6 5.4 41 360-400 53-95 (231)
490 3ic5_A Putative saccharopine d 21.2 98 0.0033 25.0 4.4 34 1-41 5-39 (118)
491 2gk4_A Conserved hypothetical 20.9 62 0.0021 31.8 3.5 39 2-40 4-52 (232)
492 3lft_A Uncharacterized protein 20.8 2.9E+02 0.0099 26.5 8.4 81 297-397 2-89 (295)
493 3pzy_A MOG; ssgcid, seattle st 20.6 55 0.0019 30.2 2.9 65 315-393 31-97 (164)
494 4hv4_A UDP-N-acetylmuramate--L 20.5 93 0.0032 33.5 5.1 57 2-64 123-179 (494)
495 2x8n_A CV0863; non-uniform sam 20.4 1.8E+02 0.0063 25.3 6.0 58 20-89 13-71 (111)
496 1udb_A Epimerase, UDP-galactos 20.3 90 0.0031 30.7 4.6 30 1-37 1-30 (338)
497 1yzf_A Lipase/acylhydrolase; s 20.3 1E+02 0.0034 27.1 4.5 32 138-171 66-103 (195)
498 3rfq_A Pterin-4-alpha-carbinol 20.3 1.4E+02 0.0047 28.2 5.6 54 111-172 68-135 (185)
499 3eaf_A ABC transporter, substr 20.2 3.7E+02 0.013 26.7 9.4 90 296-399 3-107 (391)
500 3e70_C DPA, signal recognition 20.0 1.4E+02 0.0046 30.6 6.0 38 3-42 131-168 (328)
No 1
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=5.1e-199 Score=1612.48 Aligned_cols=529 Identities=48% Similarity=0.850 Sum_probs=510.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEecCCccccCCCCccccccCC
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 80 (601)
||||||||||+|||||||+|||||+|||+||||||+||||||||||||||||||||||||||||+||||||||||||||+
T Consensus 3 ~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dpylnvd~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 82 (535)
T 3nva_A 3 NKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPYINVDAGTMNPYMHGEVFVTEDGAETDLDLGHYERFMDV 82 (535)
T ss_dssp CEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEECSSSSSSTTCCHHHHCCCEECTTCCEECTHHHHHHHHHCC
T ss_pred ceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCcceeecCCCCCccccceEEEecCCccccccccchhhhcCC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 007496 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (601)
Q Consensus 81 ~l~~~~n~t~gkiy~~vi~ker~g~ylg~tvqviphit~~i~~~i~~~~~~~~d~~~~~~dv~i~e~ggtvgdies~pf~ 160 (601)
+|||+||+||||||++||+|||||||||||||||||||||||+||+++|+ ..+|||||||||||||||||+||+
T Consensus 83 ~l~~~~n~ttg~iy~~vi~ker~g~ylg~tvqviphit~eik~~i~~~~~------~~~~dv~i~eiggtvgdies~pf~ 156 (535)
T 3nva_A 83 NMTKYNNITAGKVYFEVIKKEREGKYLGQTVQIIPHVTDQIKDMIRYASK------INNAEITLVEIGGTVGDIESLPFL 156 (535)
T ss_dssp CCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHH------HHTCSEEEEEECSCTTSGGGHHHH
T ss_pred CcccccCcchhHHHHHHHHHHhcCCcCCCeeEECCCchHHHHHHHHHhhc------cCCCCEEEEEeCCccchhcccHHH
Confidence 99999999999999999999999999999999999999999999999996 468999999999999999999999
Q ss_pred HHHHHHhhHcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhcCCCcccEEEEecCCCCCchhhccccccCCCCCCC
Q 007496 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (601)
Q Consensus 161 ea~rq~~~~~g~~n~~~ih~~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~r~Kislf~~v~~~~ 240 (601)
||+||||+++|++|+|||||||||||+++||+||||||||||+|||+|||||+|||||++++++++|+||||||||++++
T Consensus 157 ea~rq~~~~~g~~n~~~ih~tlvp~~~~~ge~ktkptqhsv~~Lrs~GIqPdilvcRs~~~l~~~~r~KiaLfc~V~~~~ 236 (535)
T 3nva_A 157 EAVRQLKLEEGEDNVIFVHIALVEYLSVTGELKTKPLQHSVQELRRIGIQPDFIVGRATLPLDDETRRKIALFTNVKVDH 236 (535)
T ss_dssp HHHHHHHHHHCTTTEEEEEEEECCBCTTTSSBCCHHHHHHHHHHHHHTCCCSEEEEEESSCCCHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHhCCCCEEEEEeeccceecCCCcccCCchHHHHHHHHhCCCCCCEEEEecCCCCCHHHHHhhhhhcCCChhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCcccccHHHHhcchhhhhhhhcCCCCCCCchhhHHHHHHHHHhc--CCCCceEEEEEcccCCCcchHHHHHH
Q 007496 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICD--GLHEPVRIAMVGKYTGLSDAYLSILK 318 (601)
Q Consensus 241 Vi~i~dvdtiy~vpl~L~~qg~~~~i~~~l~l~~~~~~~~l~~w~~l~~~~~--~~~~~v~IalVGkY~~l~DaY~SIi~ 318 (601)
||+++|+||||++|++||+||+++.++++|+|+ .+.++|++|+++++++. ++.++++|||||||+.+.|||.|+.+
T Consensus 237 VI~i~DvdtiY~vpl~L~~qGl~~~~~~~l~l~--~~~~~~~~w~~~~~~~~~~~~~~~v~IalVGKY~~l~DaY~Sv~e 314 (535)
T 3nva_A 237 IVSSYDVETSYEVPIILESQKLVSKILSRLKLE--DRQVDLTDWISFVNNIKGINSKKTINIALVGKYTKLKDSYISIKE 314 (535)
T ss_dssp EEEEECCSCGGGHHHHHHHHTHHHHHHHHTTCC--CCCCCCHHHHHHHHHHHTTTCCCEEEEEEEESCTTSGGGGHHHHH
T ss_pred eEecCCCChHHHhHHHHHHCCcHHHHHHHcCCC--CCCCCHHHHHHHHHHhhccCCCCeeEEEEEecCcCCchhHHHHHH
Confidence 999999999999999999999999999999997 46779999999999999 88889999999999999999999999
Q ss_pred HHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007496 319 ALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (601)
Q Consensus 319 aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGIC 398 (601)
||+|+|+++.+++++.|++++++++++. +||+.|.++|||++|||||+++.++++.++++|+++++|+||||
T Consensus 315 AL~hag~~~~~~V~I~wIds~~l~~~~~--------~~~~~L~~~DgIIlpGG~G~~~~~g~i~~ir~a~~~~~PiLGIC 386 (535)
T 3nva_A 315 AIYHASAYIGVRPKLIWIESTDLESDTK--------NLNEILGNVNGIIVLPGFGSRGAEGKIKAIKYAREHNIPFLGIC 386 (535)
T ss_dssp HHHHHHHHTTCEEEEEEEEGGGGCCSSS--------CCTTTTTSCSEEEECCCCSSTTHHHHHHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHcCCCeEEEEecchhcccccc--------chhhhccCCCEEEECCCCCCccHHHHHHHHHHHHHcCCcEEEEC
Confidence 9999999999999999999998876432 14578999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCC-cccCCCceeeCceeEEEccCCchhhhccCCceeEeeee
Q 007496 399 LGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGS-KTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERH 477 (601)
Q Consensus 399 LGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~-~~h~GgtmrLG~~~v~l~~~~s~l~~lyg~~~~I~erh 477 (601)
+|||+|+++|||+|+|++||+|+||++++++|++.+|+++. ..++|||||+|.|+|.+.++ |+++++|+ +..|.|||
T Consensus 387 lG~Qll~va~Gg~v~g~qda~s~Ef~~~~~~pvI~~m~eq~~~~~~ggtmrlg~h~v~l~~g-S~L~~iyG-~~~I~erH 464 (535)
T 3nva_A 387 FGFQLSIVEFARDVLGLSEANSTEINPNTKDPVITLLDEQKNVTQLGGTMRLGAQKIILKEG-TIAYQLYG-KKVVYERH 464 (535)
T ss_dssp HHHHHHHHHHHHTTTCCTTCEETTTCTTCSCEEEECBCSSSCBCSSCCCCEEEEEEEEECTT-SHHHHHHT-SSEEEEEE
T ss_pred cchhHHHHHhhccccCccCCcccccCCCCCCCeeecchhcccccccCCccccCceEEEEcCC-CcHHHHhC-CCeeeecc
Confidence 99999999999999999999999999999999999999864 47899999999999999998 89999997 66789999
Q ss_pred ceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEECCCCcEEEEcccCCCcCCCCCchHHHHHHHHHHhc
Q 007496 478 RHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACG 548 (601)
Q Consensus 478 rHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffvGVQFHPE~ss~p~~p~pLF~~Fv~aa~~ 548 (601)
||||+||+.+.+.++++||+++|+++||. +|++|+++||||+|||||||+.++|.+++|||.+|++||.+
T Consensus 465 rHryeVNs~h~q~l~~~GL~vsA~s~DG~-IEAIE~~~~pf~vGVQfHPE~~~~p~~~~~LF~~Fv~Aa~~ 534 (535)
T 3nva_A 465 RHRYEVNPKYVDILEDAGLVVSGISENGL-VEIIELPSNKFFVATQAHPEFKSRPTNPSPIYLGFIRAVAS 534 (535)
T ss_dssp EECCEECHHHHHHHHHTTCEEEEECTTCC-EEEEECTTSSCEEEESSCGGGGCCSSSCCHHHHHHHHHHTC
T ss_pred cccceechHHHhhcccCCeEEEEEeCCCC-EEEEEeCCCCcEEEEEeCCEecCCCCChhHHHHHHHHHHHh
Confidence 99999999999999889999999999995 99999999999999999999999999999999999999864
No 2
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=100.00 E-value=2.6e-164 Score=1357.03 Aligned_cols=529 Identities=50% Similarity=0.861 Sum_probs=496.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEecCCccccCCCCccccccCC
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 80 (601)
||||||||||+||+|||+++||||+||+++||+|+++|+|||||||||||||+||||||||+||+|+||||||||||+++
T Consensus 12 ~~~i~v~gg~~s~~gk~~~~~~~~~~l~~~g~~v~~~k~~py~n~d~~~ms~~~hge~~vt~dg~e~~~~~g~~~~~~~~ 91 (550)
T 1vco_A 12 RKYVFITGGVVSSLGKGILTSSLGALLRARGYRVTAIKIDPYVNVDAGTMRPYEHGEVFVTADGAETDLDIGHYERFLDM 91 (550)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEECSSCSSGGGSCSSTTSCCEECTTCCEECTHHHHHHHHHTS
T ss_pred eeEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeEeecccccccCccccCcccCCceEECCCCceehhhhccHHhcCCc
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 007496 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (601)
Q Consensus 81 ~l~~~~n~t~gkiy~~vi~ker~g~ylg~tvqviphit~~i~~~i~~~~~~~~d~~~~~~dv~i~e~ggtvgdies~pf~ 160 (601)
.|+++||+||||||++||+|||+|||||+|||||||||||||+||+++++ ..++||||||+||||||||||||+
T Consensus 92 ~l~~~~~~~~g~~~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~------~~~~d~~i~e~~gt~~di~~~~~~ 165 (550)
T 1vco_A 92 DLSRGNNLTTGQVYLSVIQKERRGEYLSQTVQVIPHITDEIKERIRKVAE------EQKAEIVVVEVGGTVGDIESLPFL 165 (550)
T ss_dssp CCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCTTTHHHHHHHHHHHHHHH------HTTCSEEEEEECSCTTSSTTHHHH
T ss_pred ccCCCCCeeccEEchhhhhhhcccccccCceEEhhHHHHHHHHHHHHHhc------ccCCCEEEEECCCChhHhhhHHHH
Confidence 99999999999999999999999999999999999999999999999985 457999999999999999999999
Q ss_pred HHHHHHhhHcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhcCCCcccEEEEecCCCCCchhhccccccCCCCCCC
Q 007496 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (601)
Q Consensus 161 ea~rq~~~~~g~~n~~~ih~~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~r~Kislf~~v~~~~ 240 (601)
||+|||++++|++|+|||||||||||+++||+|||||||||++|||.|||||++|||++++++++||+|+||||||++++
T Consensus 166 ~~~rq~~~~~~~~~~~~~h~~~~p~~~~~~e~ktkptq~sv~~lrs~gi~pd~lvvR~~~~~~~~~r~k~sL~~~v~~~~ 245 (550)
T 1vco_A 166 EAIRQFRFDEGEGNTLYLHLTLVPYLETSEEFKTKPTQHSVATLRGVGIQPDILVLRSARPVPEEVRRKVALFTNVRPGH 245 (550)
T ss_dssp HHHHTHHHHHCTTSEEEEEEEECCEETTTTEECCHHHHHHHHHHHHTTCCCSEEEEEESSCCCHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHhHhhCcCCEEEEEEeCeecccCCCCcCCCCcchhHHHHhcCCCccCEEEEeCCCCCCcchhcccchhcCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCcccccHHHHhcchhhhhhhhcCCCCCCCchhhHHHHHHHHHhcCCCCceEEEEEcccCCCcchHHHHHHHH
Q 007496 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKAL 320 (601)
Q Consensus 241 Vi~i~dvdtiy~vpl~L~~qg~~~~i~~~l~l~~~~~~~~l~~w~~l~~~~~~~~~~v~IalVGkY~~l~DaY~SIi~aL 320 (601)
||+++||||||+||++||+||+|++++++++|+ ...+++..|.+++.++.++..+++|+++|||..+.|+|.|+.++|
T Consensus 246 Vi~~~dvdt~y~lp~~lr~~G~~~~v~~~~~l~--~~~~~l~~w~~~~~~~~~~~~~v~I~ivgkyv~l~D~y~Sv~~aL 323 (550)
T 1vco_A 246 VFSSPTVEHLYEVPLLLEEQGLGRAVERALGLE--AVIPNLSFWQEAVRVLKHPERTVKIAIAGKYVKMPDAYLSLLEAL 323 (550)
T ss_dssp EEEEECCSCTTHHHHHHHHHTHHHHHHHHTTCC--CCCCCCHHHHHHHHHHHSCSEEEEEEEEESCC---CTTHHHHHHH
T ss_pred eeecCCCChHHHHHHHHHHcCChhhhHhhCCCC--chhHHHHHhHHHHHhhcCCCCceEEcccCCeEEEEecHHHHHHHH
Confidence 999999999999999999999999999999986 356688999999999999988999999999999999999999999
Q ss_pred HHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEehh
Q 007496 321 LHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLG 400 (601)
Q Consensus 321 ~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGICLG 400 (601)
.|++.++++++.+.|++++++++++ +++.+.++||||||||||+++.++++.++++|+++++|+||||||
T Consensus 324 ~~~g~~~g~~v~I~~~d~~~~~~~~----------~~~~L~~~DGIILpGGfGd~~~~g~i~~ir~a~e~~iPiLGICLG 393 (550)
T 1vco_A 324 RHAGIKNRARVEVKWVDAESLEAAD----------LEEAFRDVSGILVPGGFGVRGIEGKVRAAQYARERKIPYLGICLG 393 (550)
T ss_dssp HHHHHHTTEEEEEEEEEGGGC--CC----------HHHHTTTCSCEEECCCCSSTTHHHHHHHHHHHHHTTCCEEEETHH
T ss_pred HHHHHHcCCeEEEEEeCccccccch----------HHHHHhcCCEEEECCCCCCcchhhhHHHHHHHHHCCCcEEEECcC
Confidence 9999999999999999987765322 346688999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCC-CCcccCCCceeeCceeEEEccCCchhhhccCCceeEeeeece
Q 007496 401 MQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-GSKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRH 479 (601)
Q Consensus 401 mQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe-~~~~h~GgtmrLG~~~v~l~~~~s~l~~lyg~~~~I~erhrH 479 (601)
||+|+++||++++++++++|+||++.+.+|++..|++ ...+|+|++||+|.++|.+.++ +++..+|+ ...|.++|||
T Consensus 394 mQlL~~a~Gg~v~~l~~~~s~E~~~~~~hpvi~~~~~q~~i~~~ggtmrlG~~~v~i~~~-s~l~~iy~-~~~v~e~h~H 471 (550)
T 1vco_A 394 LQIAVIEFARNVAGLKGANSTEFDPHTPHPVIDLMPEQLEVEGLGGTMRLGDWPMRIKPG-TLLHRLYG-KEEVLERHRH 471 (550)
T ss_dssp HHHHHHHHHHHTSCCTTCEETTTCTTCSCEEEEESCGGGCC---CCCCEEEEEEEEECTT-SHHHHHHC-CSEEEEEEEE
T ss_pred HHHHHHHhCcccccCCccccccccCCCCCCeEEeccccccccccCCcccccceEEEEccC-chhhHhcC-Cceeeeeccc
Confidence 9999999999999999999999999999999999987 4578999999999999999876 89999997 5677899999
Q ss_pred eeeeChhhHhhhccCCeEEEEEeCCC-----CeEEEEEECCCCcEEEEcccCCCcCCCCCchHHHHHHHHHHhcc
Q 007496 480 RYEVNPDMIARLENAGLSFTGKDETS-----QRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQ 549 (601)
Q Consensus 480 rYeVn~~~v~~le~~Gl~~~g~s~dg-----~~vE~IE~~~hpffvGVQFHPE~ss~p~~p~pLF~~Fv~aa~~~ 549 (601)
+|+||+.+.+.++++|++++|+++|| ..+|++|+++||||+|||||||++++|.++++||.+|+++|.++
T Consensus 472 ~Y~Vns~~~~~l~~~gl~v~a~s~dG~g~~~~~VeaIe~~~~p~fvGVQFHPE~~~~p~~g~~LF~~Fv~aa~~~ 546 (550)
T 1vco_A 472 RYEVNPLYVDGLERAGLVVSATTPGMRGRGAGLVEAIELKDHPFFLGLQSHPEFKSRPMRPSPPFVGFVEAALAY 546 (550)
T ss_dssp SEEECHHHHHHHHHHTEEEEEECCCBTTBSTTCEEEEEETTSSSEEEESSCGGGGCBTTBCCHHHHHHHHHHHHH
T ss_pred eEEEchHHhhccccCCeEEEEEeCCCCccCCCcEEEEEeCCCCEEEEEEeCCccCCCCCChHHHHHHHHHHHHhh
Confidence 99999999888855799999999994 36999999999999999999999999999999999999998754
No 3
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=100.00 E-value=2.3e-162 Score=1340.18 Aligned_cols=527 Identities=49% Similarity=0.835 Sum_probs=494.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEecCCccccCCCCccccccCC
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 80 (601)
||||||||||+||+|||+++||||+||+++||+|+.+|+|||||||||||||+||||||||+||+|+||||||||||+|+
T Consensus 3 ~~~i~v~gg~~s~~gk~~~~~~l~~~l~~~g~~v~~~k~~py~n~d~~~ms~~~hge~~vt~dg~e~~~~~~~~~~~~~~ 82 (545)
T 1s1m_A 3 TNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRT 82 (545)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEECCSCSCGGGSCTTTSCCCEECTTSCEECTHHHHHHHHCSS
T ss_pred ceEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeeeeccccccCCCCccCcccCCCeEECCCCCeehhhhccceeeece
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 007496 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (601)
Q Consensus 81 ~l~~~~n~t~gkiy~~vi~ker~g~ylg~tvqviphit~~i~~~i~~~~~~~~d~~~~~~dv~i~e~ggtvgdies~pf~ 160 (601)
.|+++||+||||||++||+|||+|||+|+|||++||||||||+||+++++ ++||||||+||||||||||||+
T Consensus 83 ~l~~~~~~~~g~~~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~--------~~d~~i~e~~gt~~di~~~~~~ 154 (545)
T 1s1m_A 83 KMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGE--------GHDVVLVEIGGTVGDIESLPFL 154 (545)
T ss_dssp CCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHT--------TCSEEEEEECSCTTSSTTHHHH
T ss_pred eecCCCCeeccEEeeehhhhccccccccCceeehhHHHHHHHHHHHHHhc--------cCCEEEEECCCChhhhhChHHH
Confidence 99999999999999999999999999999999999999999999999984 7899999999999999999999
Q ss_pred HHHHHHhhHcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhcCCCcccEEEEecCCCCCchhhccccccCCCCCCC
Q 007496 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (601)
Q Consensus 161 ea~rq~~~~~g~~n~~~ih~~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~r~Kislf~~v~~~~ 240 (601)
||+|||++++|++|+|||||||||||+++||+|||||||||++|||.|||||+||||++++++++||+|+||||||++++
T Consensus 155 ~~~~q~~~~~~~~~~~~~h~~~~p~~~~~ge~ktkptq~sv~~l~s~gi~pd~lv~R~~~~~~~~~r~kisL~~~v~~~~ 234 (545)
T 1s1m_A 155 EAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKA 234 (545)
T ss_dssp HHHHHHHHHHCTTSEEEEEEEECCEETTTTEECCHHHHHHHHHHHTTTCCCSEEEEEESSCCCHHHHHHHHHTTCCCSSC
T ss_pred HHHHHHhHhhCcCcEEEEEEeCcccccCCCCcCCCCCcCCHHHHhCCCCccCEEEEeCCCCCCchhhccCChhhCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCcccccHHHHhcchhhhhhhhcCCCCCCCchhhHHHHHHHHHhcCCCCceEEEEEcccCCCcchHHHHHHHH
Q 007496 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKAL 320 (601)
Q Consensus 241 Vi~i~dvdtiy~vpl~L~~qg~~~~i~~~l~l~~~~~~~~l~~w~~l~~~~~~~~~~v~IalVGkY~~l~DaY~SIi~aL 320 (601)
||+++||||||+||++||+||++++++++++++ ...+++.+|.+++++++++...++||++|||+.+.|+|.|+.++|
T Consensus 235 Vi~~~dvdt~y~lp~~lr~~G~~~~ii~~~~l~--~~~~~l~~w~~lv~~v~~~~~~v~i~~vGkyv~l~D~y~Si~~aL 312 (545)
T 1s1m_A 235 VISLKDVDSIYKIPGLLKSQGLDDYICKRFSLN--CPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEAL 312 (545)
T ss_dssp EEEEECCSCGGGHHHHHHHTTHHHHHHHHTTCC--CCCCCCHHHHHHHHHHHCCSEEEEEEEEESSCSSGGGGHHHHHHH
T ss_pred ceecCCCChHHHHHHHHHHcCChhhhhhhCCCC--chhHHHHHHHHHHHhccCCCCeEEeCCcCCeEEEEEHHHHHHHHH
Confidence 999999999999999999999999999999986 355688999999999999988999999999999999999999999
Q ss_pred HHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEehh
Q 007496 321 LHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLG 400 (601)
Q Consensus 321 ~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGICLG 400 (601)
.++|+++.+++.+.|+++++++++ +++.+.++||||||||||+++.++++.++++++++++|+||||||
T Consensus 313 ~~~G~~~~~~V~i~~~d~e~i~~~-----------~~~~l~~~DGIilsGGpg~~~~~g~~~~i~~a~~~~~PiLGIClG 381 (545)
T 1s1m_A 313 KHGGLKNRVSVNIKLIDSQDVETR-----------GVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLG 381 (545)
T ss_dssp HHHHHHHTEEEEEEEEEHHHHHHH-----------CTTTTTTCSEEEECCCCSSTTHHHHHHHHHHHHHTTCCEEEETHH
T ss_pred HHhCcccCCeEEEccCCHHHhhhh-----------hhhhhhcCCEEEECCCCCCccchhhHHHHHHHHHCCCcEEEECCh
Confidence 999999888889999987655311 124478899999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccccccCCCCCccCCCCCCCeeeeC----------CCC-CcccCCCceeeCceeEEEccCCchhhhccCC
Q 007496 401 MQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFM----------PEG-SKTHMGGTMRLGSRRTYFQIKDCKSAKLYGN 469 (601)
Q Consensus 401 mQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~m----------pe~-~~~h~GgtmrLG~~~v~l~~~~s~l~~lyg~ 469 (601)
||+|+++||++|++|++++|+||++.+.+|++.+| +++ ...++|+|||+|.++|.+.++ +++.++|+
T Consensus 382 ~Qll~va~Gg~v~~l~~a~s~E~~~~~~hpvi~l~~~w~~~~g~~~~q~~~~~~ggtmrlG~~~v~l~~~-s~l~~iyg- 459 (545)
T 1s1m_A 382 MQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDD-SLVRQLYN- 459 (545)
T ss_dssp HHHHHHHHHHHHHCCTTCEETTTCSSCSCEEEECTTTCCCTTSCCC----------CCEEEEEEEEECTT-CHHHHHTT-
T ss_pred HHHHHHHhCCceecCCCCcccccCCCCCCceEEeecccccccccccccccccccCccccccceeeEeccC-CHHHHhcC-
Confidence 99999999999999999999999999999999998 442 356889999999999999887 89999997
Q ss_pred ceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEECCCCcEEEEcccCCCcCCCCCchHHHHHHHHHHhcc
Q 007496 470 RTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQ 549 (601)
Q Consensus 470 ~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffvGVQFHPE~ss~p~~p~pLF~~Fv~aa~~~ 549 (601)
...+.+||+|+|+||+.+.+.++++|++++|+++||..+|++|+++||||+|||||||+.++|.++++||.+|+++|.++
T Consensus 460 ~~~v~e~h~Hry~VNs~~~~~l~~~gl~v~a~s~dg~~VEaie~~~~p~flGVQFHPE~~~~p~~g~~LF~~Fv~aa~~~ 539 (545)
T 1s1m_A 460 APTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEF 539 (545)
T ss_dssp SSEEEEEEEECCEECHHHHHHHHHTTCEEEEECSSSCCEEEEECTTSSSEEEESSCGGGTCCTTTCCHHHHHHHHHHHHH
T ss_pred CceEEEecCcceEEChHHhhhcccCCeEEEEECCCCCceEEEEeCCCCEEEEEeCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence 56788999999999999998887799999999999966999999999999999999999999999999999999999764
Q ss_pred h
Q 007496 550 L 550 (601)
Q Consensus 550 ~ 550 (601)
.
T Consensus 540 ~ 540 (545)
T 1s1m_A 540 Q 540 (545)
T ss_dssp H
T ss_pred H
Confidence 4
No 4
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=100.00 E-value=1.4e-144 Score=1078.04 Aligned_cols=272 Identities=67% Similarity=1.118 Sum_probs=229.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEecCCccccCCCCccccccCC
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 80 (601)
||||||||||+|||||||+|||||+|||+|||+||+||||||||+|||||||||||||||||||+||||||||||||||+
T Consensus 23 mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPYlNvD~GTMsP~qHGEVfVtdDG~EtDLDLGhYERFl~~ 102 (294)
T 2c5m_A 23 MKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDI 102 (294)
T ss_dssp CEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECBCCCCC---------------------------------
T ss_pred eEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCceeecCCCCCccccceEEEecCCccccccccchhhhcCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 007496 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (601)
Q Consensus 81 ~l~~~~n~t~gkiy~~vi~ker~g~ylg~tvqviphit~~i~~~i~~~~~~~~d~~~~~~dv~i~e~ggtvgdies~pf~ 160 (601)
+|||+||+||||||++||+|||||||||||||||||||||||+||+++|++|||+++.+|||||||||||||||||+||+
T Consensus 103 ~lt~~nNiTtGkIY~~VI~KERrGdYLGkTVQVIPHiTdeIk~~I~~~a~~pvd~~~~~~Dv~IiEiGGTVGDIES~PFl 182 (294)
T 2c5m_A 103 RLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQALIPVDEDGLEPQVCVIELGGTVGDIESMPFI 182 (294)
T ss_dssp --CCTTEEEHHHHHHHHHHHHHTSCSCSSCCCTTTHHHHHHHHHHHHHTTCC------CCSEEEEEECSCTTCSTTHHHH
T ss_pred CCcccccccHHHHHHHHHHHHhcCCcCCceeEEcCCchHHHHHHHHHHhcCCccccCCCCCEEEEEeCCcchhhcccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhcCCCcccEEEEecCCCCCchhhccccccCCCCCCC
Q 007496 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (601)
Q Consensus 161 ea~rq~~~~~g~~n~~~ih~~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~r~Kislf~~v~~~~ 240 (601)
||+||||+++|++|+|||||||||||+++|||||||||||||+|||+|||||+|+|||+.+++++.|+|||+||+|++++
T Consensus 183 EAiRQ~~~~~g~~n~~~iHvtlVP~i~~~gE~KTKPTQhSVk~Lr~~Gi~PDiivcRse~~l~~~~k~KIalfc~V~~~~ 262 (294)
T 2c5m_A 183 EAFRQFQFKVKRENFCNIHVSLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISMFCHVEPEQ 262 (294)
T ss_dssp HHHHTTTTTSCTTTEEEEEEEECCCCTTTCSCCCHHHHHHHHHHHHTTCCCSEEEEECSSCCCTTHHHHHHHTTTCCCSC
T ss_pred HHHHHHHHHhCCCCEEEEEeeccceecCCCcccCCCcHHHHHHHHHcCCCCCEEEEecCCCCCHHHHHHHHHhcCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCcccccHHHHhcchhhhhhhhcCC
Q 007496 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNL 272 (601)
Q Consensus 241 Vi~i~dvdtiy~vpl~L~~qg~~~~i~~~l~l 272 (601)
||+++|++++|+||++|++||+++.++++|+|
T Consensus 263 Vi~~~D~~~IY~VPl~l~~qgl~~~i~~~L~l 294 (294)
T 2c5m_A 263 VICVHDVSSIYRVPLLLEEQGVVDYFLRRLDL 294 (294)
T ss_dssp CEECCCCSCGGGHHHHHHTTTHHHHHHHHTTC
T ss_pred EEecCCcchHHHhhHHHHHCChHHHHHHHhCc
Confidence 99999999999999999999999999999876
No 5
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=100.00 E-value=2.6e-142 Score=1070.12 Aligned_cols=273 Identities=66% Similarity=1.114 Sum_probs=231.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEecCCccccCCCCccccccCC
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 80 (601)
||||||||||+|||||||+|||||+|||+|||+||++|||||||+|||||||||||||||||||+||||||||||||||+
T Consensus 23 ~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlNvD~GTMsP~qHGEVfVtdDG~EtDLDLGhYERFl~~ 102 (295)
T 2vo1_A 23 MKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDI 102 (295)
T ss_dssp CEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSCCC----------------------------------
T ss_pred ceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccceecCCCCCChhhhceEEeecccccccccccchHhhccC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 007496 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (601)
Q Consensus 81 ~l~~~~n~t~gkiy~~vi~ker~g~ylg~tvqviphit~~i~~~i~~~~~~~~d~~~~~~dv~i~e~ggtvgdies~pf~ 160 (601)
+|+|+||+||||||++||+|||||||||||||||||||||||+||+++|.+|+|+++.+|||||||||||||||||+||+
T Consensus 103 ~l~~~~niTtGkiY~~Vi~kERrGdYLG~TVQvIPHiTdeIk~~I~~~a~~~~~~~~~~~Dv~IvEiGGTVGDIEs~PFl 182 (295)
T 2vo1_A 103 RLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQALIPVDEDGLEPQVCVIELGGTVGDIESMPFI 182 (295)
T ss_dssp -----CEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHHSCCSSSCCCCSEEEEEECSCTTCGGGHHHH
T ss_pred CcCccccccHHHHHHHHHHHHHcCCCCCCeEEecCChhhHHHHHHHHhhcccccccCCCCCEEEEEcCceeccccccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhcCCCcccEEEEecCCCCCchhhccccccCCCCCCC
Q 007496 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (601)
Q Consensus 161 ea~rq~~~~~g~~n~~~ih~~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~r~Kislf~~v~~~~ 240 (601)
||+||||+++|++|+||||||||||++++||+||||||||||+|||+|||||+|+|||+.+++++.|+||||||+|++++
T Consensus 183 EAiRQ~~~~~g~~n~~~iHvtlvP~l~~~gE~KTKPTQhSVkeLr~~GIqPDiivcRse~pl~~~~k~KIAlFCnV~~~~ 262 (295)
T 2vo1_A 183 EAFRQFQFKVKRENFCNIHVSLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISMFCHVEPEQ 262 (295)
T ss_dssp HHHHHHHHHSCGGGEEEEEEEECCCCCC-CCCCCHHHHHHHHHHHHHTCCCSEEEEECSSCCCHHHHHHHHHHTTSCGGG
T ss_pred HHHHHHHHhhcccceeEEEeeccccccccccccccchHhHHHHHHhcCCCCCeeeecCCCCCCHHHHHHHHHccCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCCCCcccccHHHHhcchhhhhhhhcCCC
Q 007496 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQ 273 (601)
Q Consensus 241 Vi~i~dvdtiy~vpl~L~~qg~~~~i~~~l~l~ 273 (601)
||+++|++|||+||++|++||+++.++++|+|+
T Consensus 263 VI~~~Dv~sIYeVPl~L~~qgl~~~i~~~L~LP 295 (295)
T 2vo1_A 263 VICVHDVSSIYRVPLLLEEQGVVDYFLRRLDLP 295 (295)
T ss_dssp EEEECCCSSGGGHHHHHHHTTHHHHHHHHHTCC
T ss_pred EEEcCCcCcHHHHHHHHHHCCchHHHHHHcCCC
Confidence 999999999999999999999999999999985
No 6
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=100.00 E-value=3.3e-49 Score=407.65 Aligned_cols=276 Identities=53% Similarity=0.870 Sum_probs=234.6
Q ss_pred HHHHHHHHhcCCCCceEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccC
Q 007496 283 EWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKG 362 (601)
Q Consensus 283 ~w~~l~~~~~~~~~~v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~ 362 (601)
-|+.+++++.++..+++|||||||...+++|.|+.++|+++|+++..++.+.|+++++++......+++.|+++|+.+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~Iavv~d~~~~~~s~~si~~~L~~~G~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 90 (289)
T 2v4u_A 11 VDLGTENLYFQSMKICSIALVGKYTKLRDCYASVFKALEHSALAINHKLNLMYIDSIDLEKITETEDPVKFHEAWQKLCK 90 (289)
T ss_dssp ------------CEEEEEEEEESCSSCCGGGHHHHHHHHHHHHHTTEEEEEEEEEGGGGSHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCcCCceEEEEEecCcCCCccHHHHHHHHHHhhhhhCCceEEEEechhhcccccccCChhhhhhHHHHHhh
Confidence 59999999999888899999999977888999999999999999888889999998876543223356678888888999
Q ss_pred CCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCCccc
Q 007496 363 ADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTH 442 (601)
Q Consensus 363 ~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h 442 (601)
+||||||||||++...+.+.+++++++.++|+||||+|||+|+.++|++|+|++++++.||+++.++|++.+||+.....
T Consensus 91 ~dgiil~GG~~~~~~~~~~~~i~~~~~~~~PilGIC~G~Q~l~~a~Gg~v~~~~~~~~~e~~~~~~~~~i~~~~~h~~~~ 170 (289)
T 2v4u_A 91 ADGILVPGGFGIRGTLGKLQAISWARTKKIPFLGVXLGMQLAVIEFARNCLNLKDADSTEFRPNAPVPLVIDMPEHNPGN 170 (289)
T ss_dssp CSEEEECSCCSSTTHHHHHHHHHHHHHTTCCEEEETHHHHHHHHHHHHHHSCCTTEEESTTCTTCSEEEEEECCBCCTTC
T ss_pred CCEEEecCCCCchhHHHHHHHHHHHHHcCCcEEEECccHHHHHHHHhccccccccCcccccCccccccceecchhhcccc
Confidence 99999999999988889999999999999999999999999999999999999999999999888899999999765556
Q ss_pred CCCceeeCceeEEEc-cCCchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEECCCCcEEE
Q 007496 443 MGGTMRLGSRRTYFQ-IKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIG 521 (601)
Q Consensus 443 ~GgtmrLG~~~v~l~-~~~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffvG 521 (601)
+|++|++|++++.+. ++ +.+.++++....+.++|+|+|+||+++++.+...|++++|+++||.++|++|++++|||+|
T Consensus 171 ~~~~~~~g~~~v~~~~~~-s~l~~~~~~~~~v~~~H~H~y~vn~~~v~~l~~~g~~v~A~s~dg~~ieaie~~~~p~~lG 249 (289)
T 2v4u_A 171 LGGTMRLGIRRTVFKTEN-SILRKLYGDVPFIEERHRHRFEVNPNLIKQFEQNDLSFVGQDVDGDRMEIIELANHPYFVG 249 (289)
T ss_dssp SSCBCEEEEEEEEESCSC-CHHHHHTTSCSEEEEEEEECEEECGGGSGGGTTSSEEEEEEETTSCSEEEEEESSSSCEEE
T ss_pred cCCccccceEEEEEecCC-CHHHHhcCCCceEEEecccccccCHHHHHhcccCCeEEEEEcCCCCeEEEEEcCCCCeEEE
Confidence 789999999999987 45 7888888743578899999999999999888338999999999985599999999999999
Q ss_pred EcccCCCcCCCCCchHHHHHHHHHHhcchhhhhcccCC
Q 007496 522 VQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQGSGS 559 (601)
Q Consensus 522 VQFHPE~ss~p~~p~pLF~~Fv~aa~~~~~~~~~~~~~ 559 (601)
||||||+.++|.+++++|.+|+++|.+++.+++++.+.
T Consensus 250 vQfHPE~~~~~~~~~~lf~~Fv~~~~~~~~~~~~~~~~ 287 (289)
T 2v4u_A 250 VQFHPEFSSRPMKPSPPYLGLLLAATGNLNAYLQQGCK 287 (289)
T ss_dssp ESSBGGGGCBTTBCCHHHHHHHHHHHTCHHHHHHTTCT
T ss_pred EECCCCCCCCCCchHHHHHHHHHHHHhhhhhhhhcccc
Confidence 99999999999888999999999999999998865543
No 7
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=4.2e-46 Score=381.47 Aligned_cols=252 Identities=43% Similarity=0.706 Sum_probs=217.8
Q ss_pred ceEEEEEccc-CCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCC
Q 007496 297 PVRIAMVGKY-TGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 375 (601)
Q Consensus 297 ~v~IalVGkY-~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~r 375 (601)
+++||||||| +.+.|+|.|+.++|++++.++.+++.+.|++++++++.+. .++++.+.++||||||||||++
T Consensus 8 ~~~Iaivg~y~~~~~dny~S~~~aL~~~g~~~~~~v~v~~~~~~~~~~~~~-------~~~~~~~~~~dgiil~GG~~~~ 80 (273)
T 2w7t_A 8 TVRIAFVGKYLQDAGDTYFSVLQCFEHCQIALQVRLDILYVDSEELEGPNA-------DEARKALLGCDGIFVPGGFGNR 80 (273)
T ss_dssp CEEEEEEECCHHHHTTTTHHHHHHHHHHHHHHTCCEEEEEEEGGGGSSTTT-------HHHHHHHHTCSEEEECCCCTTT
T ss_pred CCEEEEEeCCCcCCchHHHHHHHHHHHHHHhcCCceEEeccChhhcccccc-------hhHHHHHhhCCEEEecCCCCCc
Confidence 3899999999 6888999999999999999988889999999876653210 0123557899999999999999
Q ss_pred chhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCCcccCCCceeeCceeEE
Q 007496 376 GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTY 455 (601)
Q Consensus 376 g~eg~i~aik~are~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~v~ 455 (601)
..++.+.++++++++++|+||||+|||+|+.+||++|.++++++|.||++++++|++.+|+ .....++++|++|.+++.
T Consensus 81 ~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~a~Gg~v~~~~~~~s~E~~~~~~~~~l~~~~-~~~~~~~~~~~~g~~~v~ 159 (273)
T 2w7t_A 81 GVDGKCAAAQVARMNNIPYFGVXLGMQVAVIELSRNVVGWSDANSEEFNKESTHQVVRIMD-CDRNKMGANMHLGACDVY 159 (273)
T ss_dssp THHHHHHHHHHHHHHTCCEEEETHHHHHHHHHHHHHTTCCTTCEETTTCTTCSCEEEECCG-GGBCSSCBCCEEEEEEEE
T ss_pred CchhHHHHHHHHHHCCCcEEEECcCHHHHHHHHhCccccccCCchhhcccccCCCceeecc-ccccccCCcccccceEEE
Confidence 8889999999999999999999999999999999999999999999999888888887774 333445678899999999
Q ss_pred Ecc-CCchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCC----CCeEEEEEECCCCcEEEEcccCCCcC
Q 007496 456 FQI-KDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDET----SQRMEIVELPNHPYFIGVQFHPEYKS 530 (601)
Q Consensus 456 l~~-~~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~d----g~~vE~IE~~~hpffvGVQFHPE~ss 530 (601)
+.. + +.+.++|+....++++|+|+|+|++++++.++++|++++|+++| +..+|++|++++|||+|||||||+++
T Consensus 160 ~~~~~-s~l~~~~~~~~~v~~~H~Hsy~v~~~~v~~l~~~g~~v~A~s~d~~~~g~~ieaie~~~~p~~~GvQfHPE~~~ 238 (273)
T 2w7t_A 160 IVEKS-SIMAKIYSKSNIVVERHRHRYEVNTAYFEDLRKAGLCISAVTDPTFSSRCRVEAVENPSLRFFLAVQFHPEFIS 238 (273)
T ss_dssp ECCTT-SHHHHHTTTCSEEEEEEEECCEECGGGHHHHHHTTCEEEEESCTTCCTTCCEEEEECTTSSSEEEESSCGGGSC
T ss_pred EecCC-cHHHHHhCCCceEEeecccccccCHHHHHhhccCCcEEEEEcCCcCCCCCeEEEEEcCCCCeEEEEeCCCCcCC
Confidence 864 5 67788887566788999999999999988775689999999998 54699999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHhcchhhhhccc
Q 007496 531 RPGKPSPLFLGLIAAACGQLDTLIQGS 557 (601)
Q Consensus 531 ~p~~p~pLF~~Fv~aa~~~~~~~~~~~ 557 (601)
++.++++||.+|+++|.+++++++++.
T Consensus 239 ~~~~~~~l~~~Fv~~~~~~~~~~~~~~ 265 (273)
T 2w7t_A 239 TPMDPAPTYLSFMAAAAKKDYVWPQKC 265 (273)
T ss_dssp BTTBCCHHHHHHHHHHHTCCCCCCSSC
T ss_pred CCCchHHHHHHHHHHHHHHHHhhhhcC
Confidence 998789999999999999888887643
No 8
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=100.00 E-value=1.3e-40 Score=355.12 Aligned_cols=293 Identities=21% Similarity=0.281 Sum_probs=221.0
Q ss_pred EeeeeeeeecCCCccccCCccchhhhhhcCCCcccEEEEecCCCCCchhhccccccCCCCCCCeeeeCCCCCcccccHHH
Q 007496 178 IHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLL 257 (601)
Q Consensus 178 ih~~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~~~~l~~~~r~Kislf~~v~~~~Vi~i~dvdtiy~vpl~L 257 (601)
|-+---|.|...|=-+ .+.||.++++.++|||+.+..++|||++.||..|++.++|++|.+|||| +|+++|
T Consensus 51 i~~~t~P~iGn~Gv~~--------~d~es~~~~~~g~vv~~~~~~~s~~~~~~~l~~~l~~~~i~gi~giDTR-~lt~~i 121 (379)
T 1a9x_B 51 IVTLTYPHIGNVGTND--------ADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTR-KLTRLL 121 (379)
T ss_dssp EEEECSSBCCTTCCCG--------GGCSSSSCCBSEEECSBCCSCCCCTTCCSCHHHHHHHTTCEEEESSCHH-HHHHHH
T ss_pred eeEEcCCCccEEccCc--------hhhccccceEEEEEEccCCCCCCcccccCCHHHHHHHCCCccccCCCHH-HHHHHH
Confidence 3344456665555422 3689999999999999999999999999999999999999999999999 999999
Q ss_pred Hhcchhhhhhhhc-CCCCCCCchhhHHHH-----HHHHHhcCC-------CC----------------ceEEEEEcccCC
Q 007496 258 RDQKAHEAIFKVL-NLQGTTKEPLLKEWT-----SRAEICDGL-------HE----------------PVRIAMVGKYTG 308 (601)
Q Consensus 258 ~~qg~~~~i~~~l-~l~~~~~~~~l~~w~-----~l~~~~~~~-------~~----------------~v~IalVGkY~~ 308 (601)
|++|+|++++..- ..+.......+..|. +++..++.. .. ..+|+++ +|+
T Consensus 122 R~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~vi-D~G- 199 (379)
T 1a9x_B 122 REKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAY-DFG- 199 (379)
T ss_dssp HHHCCEEEEEEESSSCCHHHHHHHHHHCCCSTTCBCHHHHSCSSCEEECCCCCBTTTBSCCCCCGGGCCEEEEEE-ESS-
T ss_pred HhcCCeeEEEecCCCCCHHHHHHHHHhCCCccccCccceeCCCCCEEeCCCCcccccccccccccccCCCEEEEE-ECC-
Confidence 9999999988653 111000001222332 345555431 11 4689999 486
Q ss_pred CcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc-cCCCEEEECCCCCCCc-hhHHHHHHHH
Q 007496 309 LSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL-KGADGILVPGGFGNRG-VQGKILAAKY 386 (601)
Q Consensus 309 l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L-~~~DGIlvpGGfG~rg-~eg~i~aik~ 386 (601)
...|++++|+.+|+++.+ .+.+.+ . .+.. .++||||||||||++. ....+.++++
T Consensus 200 ---~k~ni~r~L~~~G~~v~v----vp~~~~-~---------------e~i~~~~~DGliLsGGPgdp~~~~~~~~~Ir~ 256 (379)
T 1a9x_B 200 ---AKRNILRMLVDRGCRLTI----VPAQTS-A---------------EDVLKMNPDGIFLSNGPGDPAPCDYAITAIQK 256 (379)
T ss_dssp ---CCHHHHHHHHHTTEEEEE----EETTCC-H---------------HHHHTTCCSEEEECCCSBCSTTCHHHHHHHHH
T ss_pred ---ChHHHHHHHHHCCCEEEE----EeccCC-H---------------HHHhhcCCCEEEEeCCCCChHHHHHHHHHHHH
Confidence 336899999999986543 222221 0 1222 3799999999999986 3677889999
Q ss_pred HHHcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCCcccCCCceeeCceeEEEccCCchhhhc
Q 007496 387 AREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAKL 466 (601)
Q Consensus 387 are~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~v~l~~~~s~l~~l 466 (601)
+.+.++|+||||||||+|+.++|++|.+++ + +|+|+ ++|+.....
T Consensus 257 ~~~~~~PILGIClG~QLLa~A~GG~v~k~~------~-----------------gh~g~-----n~pv~~~~~------- 301 (379)
T 1a9x_B 257 FLETDIPVFGICLGHQLLALASGAKTVKMK------F-----------------GHHGG-----NHPVKDVEK------- 301 (379)
T ss_dssp HTTSCCCEEEETHHHHHHHHHTTCCEEEEE------E-----------------EEEEE-----EEEEEETTT-------
T ss_pred HHHcCCCEEEECchHHHHHHHhCcEEEecc------c-----------------ccccC-----ceeeEecCC-------
Confidence 999899999999999999999999997753 2 45554 567653322
Q ss_pred cCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEe-CCCCeEEEEEECCCCcEEEEcccCCCcCCCCCchHHHHHHHHH
Q 007496 467 YGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKD-ETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAA 545 (601)
Q Consensus 467 yg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s-~dg~~vE~IE~~~hpffvGVQFHPE~ss~p~~p~pLF~~Fv~a 545 (601)
++..+ ..++|+|+|+++. + +.++++++++ +|+. +|+++++++| ++|||||||++++|.+..+||++|+++
T Consensus 302 --g~v~i-ts~~H~~aV~~~~---L-p~~~~v~a~s~~Dg~-ieai~~~~~p-i~gVQFHPE~~~~p~d~~~Lf~~Fl~~ 372 (379)
T 1a9x_B 302 --NVVMI-TAQNHGFAVDEAT---L-PANLRVTHKSLFDGT-LQGIHRTDKP-AFSFQGNPEASPGPHDAAPLFDHFIEL 372 (379)
T ss_dssp --TEEEE-EEEEEEEEECSTT---C-CTTEEEEEEETTTCC-EEEEEESSSS-EEEESSCTTCSSSCSTTTHHHHHHHHH
T ss_pred --CcEEE-EecCccceEeccc---C-CCCeEEEEEeCCCCc-EEEEEECCCC-EEEEEeCCcCCCCcccHHHHHHHHHHH
Confidence 23333 5788999998753 3 5689999998 5776 9999999988 459999999999999899999999998
Q ss_pred Hhc
Q 007496 546 ACG 548 (601)
Q Consensus 546 a~~ 548 (601)
+.+
T Consensus 373 ~~~ 375 (379)
T 1a9x_B 373 IEQ 375 (379)
T ss_dssp HHH
T ss_pred HHH
Confidence 864
No 9
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=99.95 E-value=1.8e-27 Score=240.54 Aligned_cols=193 Identities=19% Similarity=0.278 Sum_probs=138.6
Q ss_pred HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCC-------CCch---------
Q 007496 314 LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFG-------NRGV--------- 377 (601)
Q Consensus 314 ~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG-------~rg~--------- 377 (601)
.+++++|+.+|+...+ +.+....+ +.+.+..+||||||||++ +...
T Consensus 31 ~~~~~~l~~aG~~pv~---lp~~~~~~---------------~~~~l~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~ 92 (254)
T 3fij_A 31 QRYVDAIQKVGGFPIA---LPIDDPST---------------AVQAISLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPP 92 (254)
T ss_dssp HHHHHHHHHHTCEEEE---ECCCCGGG---------------HHHHHHTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHH
T ss_pred HHHHHHHHHCCCEEEE---EeCCCchH---------------HHHHHhhCCEEEECCCCCCChhhcCCccCcccCCcChh
Confidence 5789999999986532 22221111 224578999999999965 2111
Q ss_pred --hHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCCcccCC-CceeeCceeE
Q 007496 378 --QGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMG-GTMRLGSRRT 454 (601)
Q Consensus 378 --eg~i~aik~are~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~G-gtmrLG~~~v 454 (601)
...+.++++|+++++|+||||+|||+|+.++|+++... +.+. .. +.+ .|+. ..+++|.+++
T Consensus 93 rd~~~~~lir~a~~~~~PiLGIC~G~Qll~~a~Gg~v~~~--~~~~-~~-----~~~--------~h~~~~~~~~g~~~v 156 (254)
T 3fij_A 93 RDSYEIALVRAALDAGKPIFAICRGMQLVNVALGGTLYQD--ISQV-ET-----KAL--------QHLQRVDEQLGSHTI 156 (254)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEETHHHHHHHHHTTCCEESS--GGGS-SS-----CCC--------CCBCCSCTTSCCEEE
T ss_pred hhHHHHHHHHHHHHcCCCEEEECHHHHHHHHHhCCceecc--cccc-cC-----ccc--------cccCCCCCccceEEE
Confidence 23788999999999999999999999999999998542 2111 10 111 1221 2345678899
Q ss_pred EEccCCchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEEC-CCCcEEEEcccCCCcCCCC
Q 007496 455 YFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELP-NHPYFIGVQFHPEYKSRPG 533 (601)
Q Consensus 455 ~l~~~~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~-~hpffvGVQFHPE~ss~p~ 533 (601)
.+.++ +.+.+.++....+. ..|.+.|. .+ +.|++++|+++||. +|+++++ ++||++|||||||++++|.
T Consensus 157 ~~~~~-s~l~~~~~~~~~v~--~~H~~~v~-----~l-~~g~~v~a~s~dg~-ieai~~~~~~~~~~gvQfHPE~~~~~~ 226 (254)
T 3fij_A 157 DIEPT-SELAKHHPNKKLVN--SLHHQFIK-----KL-APSFKVTARTADGM-IEAVEGDNLPSWYLGVQWHPELMFQTD 226 (254)
T ss_dssp EECTT-SSGGGTCCTTEEEC--CBCSCEES-----SC-CSSEEEEEEETTCC-EEEEEESSCSSCEEEESSCGGGTGGGC
T ss_pred EeCCC-ChHHHhcCCcEEEE--Eeccchhh-----cc-CCCcEEEEEeCCCc-EEEEEecCCCCeEEEEEcCCccCCCCC
Confidence 98877 66777776443443 34566664 34 68999999999996 9999999 9998999999999999865
Q ss_pred C-chHHHHHHHHHHhcch
Q 007496 534 K-PSPLFLGLIAAACGQL 550 (601)
Q Consensus 534 ~-p~pLF~~Fv~aa~~~~ 550 (601)
+ ..+||++|+++|....
T Consensus 227 ~~~~~lf~~Fv~~~~~~~ 244 (254)
T 3fij_A 227 PESEQLFQALVDESKKTM 244 (254)
T ss_dssp HHHHHHHHHHHHHHHSCC
T ss_pred chHHHHHHHHHHHHHHHH
Confidence 3 3799999999987643
No 10
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=99.93 E-value=4.7e-25 Score=217.26 Aligned_cols=189 Identities=21% Similarity=0.281 Sum_probs=135.2
Q ss_pred CceEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCC-CCC
Q 007496 296 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGG-FGN 374 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGG-fG~ 374 (601)
..+||.+++.|.+.. .++.++|+.+|+.+.+ ...+. + + +.+.++|||||||| +++
T Consensus 12 ~~~~i~~id~~~~~~---~~~~~~l~~~G~~~~v----v~~~~-~---------~-------~~l~~~DglIl~GG~p~~ 67 (212)
T 2a9v_A 12 HMLKIYVVDNGGQWT---HREWRVLRELGVDTKI----VPNDI-D---------S-------SELDGLDGLVLSGGAPNI 67 (212)
T ss_dssp CCCBEEEEEESCCTT---CHHHHHHHHTTCBCCE----EETTS-C---------G-------GGGTTCSEEEEEEECSCG
T ss_pred ccceEEEEeCCCccH---HHHHHHHHHCCCEEEE----EeCCC-C---------H-------HHHhCCCEEEECCCCCCC
Confidence 457999997655432 2678999999987643 11111 0 1 34567999999999 787
Q ss_pred Cchh-HHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCCcccCCCceeeCcee
Q 007496 375 RGVQ-GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRR 453 (601)
Q Consensus 375 rg~e-g~i~aik~are~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~ 453 (601)
+..+ ......+++++.++|+||||+|||+|+.++|++|...+. +++ |.++
T Consensus 68 ~~~~~~~~~l~~~~~~~~~PiLGIC~G~Qll~~~lGg~v~~~~~-----------------------~~~------G~~~ 118 (212)
T 2a9v_A 68 DEELDKLGSVGKYIDDHNYPILGICVGAQFIALHFGASVVKAKH-----------------------PEF------GKTK 118 (212)
T ss_dssp GGTGGGHHHHHHHHHHCCSCEEEETHHHHHHHHHTTCEEEEEEE-----------------------EEE------EEEE
T ss_pred CcccccchhHHHHHHhCCCCEEEEChHHHHHHHHhCCEEEcCCC-----------------------ccc------Ccee
Confidence 6432 223345667789999999999999999999998864320 122 3456
Q ss_pred EEEccCCchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEECCCCcEEEEcccCCCcCCCC
Q 007496 454 TYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPG 533 (601)
Q Consensus 454 v~l~~~~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffvGVQFHPE~ss~p~ 533 (601)
+.+.+++.++. .++. ....+|.|+|.+. .+ +.+++++|+++++. +++++.+++| ++|||||||++.++.
T Consensus 119 v~~~~~~~l~~-~~~~--~~~v~~~H~~~v~-----~l-~~~~~vlA~s~d~~-i~ai~~~~~~-i~gvQfHPE~~~~~~ 187 (212)
T 2a9v_A 119 VSVMHSENIFG-GLPS--EITVWENHNDEII-----NL-PDDFTLAASSATCQ-VQGFYHKTRP-IYATQFHPEVEHTQY 187 (212)
T ss_dssp EEESCCCGGGT-TCCS--EEEEEEEEEEEEE-----SC-CTTEEEEEECSSCS-CSEEEESSSS-EEEESSCTTSTTSTT
T ss_pred eEECCCChhHh-cCCC--ceEEEeEhhhhHh-----hC-CCCcEEEEEeCCCC-EEEEEECCCC-EEEEEeCCCCCCCcc
Confidence 66666533433 3332 2345788998874 23 67899999999886 9999998877 669999999998664
Q ss_pred CchHHHHHHHHHHhcc
Q 007496 534 KPSPLFLGLIAAACGQ 549 (601)
Q Consensus 534 ~p~pLF~~Fv~aa~~~ 549 (601)
+.++|++|+++|...
T Consensus 188 -g~~l~~~F~~~~~~~ 202 (212)
T 2a9v_A 188 -GRDIFRNFIGICASY 202 (212)
T ss_dssp -HHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHh
Confidence 689999999987653
No 11
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=99.92 E-value=2.1e-24 Score=209.40 Aligned_cols=181 Identities=18% Similarity=0.253 Sum_probs=127.4
Q ss_pred EEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhcc--CCCEEEECCCCCCCch
Q 007496 300 IAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK--GADGILVPGGFGNRGV 377 (601)
Q Consensus 300 IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~--~~DGIlvpGGfG~rg~ 377 (601)
|+|++.+.+. . .++.++|+.+|+++.+ .+.+..++ +.+. ++||||+|||+|.+..
T Consensus 4 i~iid~~~s~--~-~~~~~~l~~~G~~~~v----~~~~~~~~----------------~~~~~~~~dglil~gG~~~~~~ 60 (195)
T 1qdl_B 4 TLIIDNYDSF--V-YNIAQIVGELGSYPIV----IRNDEISI----------------KGIERIDPDRLIISPGPGTPEK 60 (195)
T ss_dssp EEEEECSCSS--H-HHHHHHHHHTTCEEEE----EETTTSCH----------------HHHHHHCCSEEEECCCSSCTTS
T ss_pred EEEEECCCch--H-HHHHHHHHhCCCEEEE----EeCCCCCH----------------HHHhhCCCCEEEECCCCCChhh
Confidence 9999866543 2 3778999999876533 23221111 1222 7999999999988754
Q ss_pred ---h-HHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCCcccCCCceeeCcee
Q 007496 378 ---Q-GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRR 453 (601)
Q Consensus 378 ---e-g~i~aik~are~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~ 453 (601)
. ...+.++++ +.++|+||||+|||+|+.++|++|...+. ..| |+ .++
T Consensus 61 ~~~~~~~~~~i~~~-~~~~PvLGIC~G~QlL~~~~gg~v~~~~~----------------------~~~-g~-----~~~ 111 (195)
T 1qdl_B 61 REDIGVSLDVIKYL-GKRTPILGVCLGHQAIGYAFGAKIRRARK----------------------VFH-GK-----ISN 111 (195)
T ss_dssp HHHHTTHHHHHHHH-TTTSCEEEETHHHHHHHHHTTCEEEEEEE----------------------EEE-EE-----EEE
T ss_pred hhhhhHHHHHHHHh-cCCCcEEEEehHHHHHHHHhCCEEeccCC----------------------CcC-CC-----ceE
Confidence 2 234677775 77899999999999999999999865321 012 21 234
Q ss_pred EEEccCC--chhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEe-CCCCeEEEEEECCCCcEEEEcccCCCcC
Q 007496 454 TYFQIKD--CKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKD-ETSQRMEIVELPNHPYFIGVQFHPEYKS 530 (601)
Q Consensus 454 v~l~~~~--s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s-~dg~~vE~IE~~~hpffvGVQFHPE~ss 530 (601)
+.+.+++ .++.. ++ . .+...+.|+|.|. .+ +.+++++|++ ++|. +++++++++| ++|+|||||++.
T Consensus 112 v~~~~~~~~~l~~~-~~-~-~~~v~~~H~~~v~-----~l-~~~~~vla~s~~~g~-i~a~~~~~~~-~~gvQfHPE~~~ 180 (195)
T 1qdl_B 112 IILVNNSPLSLYYG-IA-K-EFKATRYHSLVVD-----EV-HRPLIVDAISAEDNE-IMAIHHEEYP-IYGVQFHPESVG 180 (195)
T ss_dssp EEECCSSCCSTTTT-CC-S-EEEEEEEEEEEEE-----CC-CTTEEEEEEESSSCC-EEEEEESSSS-EEEESSBTTSTT
T ss_pred EEECCCCHhHHHhc-CC-C-ceEEeccccchhh-----hC-CCCcEEEEEECCCCc-EEEEEeCCCC-EEEEecCCCCCC
Confidence 5554442 33333 33 2 3456788999885 23 6789999999 7886 9999999888 569999999998
Q ss_pred CCCCchHHHHHHHH
Q 007496 531 RPGKPSPLFLGLIA 544 (601)
Q Consensus 531 ~p~~p~pLF~~Fv~ 544 (601)
.+ .+.++|++|++
T Consensus 181 ~~-~g~~l~~~f~~ 193 (195)
T 1qdl_B 181 TS-LGYKILYNFLN 193 (195)
T ss_dssp CT-THHHHHHHHHH
T ss_pred Cc-cHHHHHHHHHh
Confidence 66 47899999987
No 12
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=99.91 E-value=5.6e-25 Score=214.82 Aligned_cols=199 Identities=17% Similarity=0.181 Sum_probs=121.6
Q ss_pred EEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCCchh
Q 007496 299 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQ 378 (601)
Q Consensus 299 ~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~rg~e 378 (601)
||+|| ||+.. +..||.+||+++|+++.+ +. +| +.+.++||||+|| +|+++..
T Consensus 4 ~I~ii-D~g~~--n~~si~~al~~~G~~~~v------~~-----------~~-------~~l~~~D~lilPG-~g~~~~~ 55 (211)
T 4gud_A 4 NVVII-DTGCA--NISSVKFAIERLGYAVTI------SR-----------DP-------QVVLAADKLFLPG-VGTASEA 55 (211)
T ss_dssp CEEEE-CCCCT--THHHHHHHHHHTTCCEEE------EC-----------CH-------HHHHHCSEEEECC-CSCHHHH
T ss_pred EEEEE-ECCCC--hHHHHHHHHHHCCCEEEE------EC-----------CH-------HHHhCCCEEEECC-CCCHHHH
Confidence 69999 59853 678999999999998643 11 11 4567899999996 4554321
Q ss_pred ----HHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCC-CCcccCCCceeeCcee
Q 007496 379 ----GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-GSKTHMGGTMRLGSRR 453 (601)
Q Consensus 379 ----g~i~aik~are~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe-~~~~h~GgtmrLG~~~ 453 (601)
.....++.+++.++|+||||+|||+|+.++++++...... .+.-...+.++..+... ....++++ ..
T Consensus 56 ~~~~~~~~~i~~~~~~~~PvlGIClG~QlL~~~~g~~~~~~~~~--~~gl~~~~~~v~~~~~~~~~~~~~~~------~~ 127 (211)
T 4gud_A 56 MKNLTERDLIELVKRVEKPLLGICLGMQLLGKLSEEKGQKADEI--VQCLGLVDGEVRLLQTGDLPLPHMGW------NT 127 (211)
T ss_dssp HHHHHHTTCHHHHHHCCSCEEEETHHHHTTSSEECCC----CCC--EECCCSSSCEEEECCCTTSCSSEEEE------EC
T ss_pred HHHHHhcChHHHHHHcCCCEEEEchhHhHHHHHhCCcccccCCc--cccceeccceEEEcccCCcceeeccc------ee
Confidence 1123467788899999999999999999988887543211 11001112333332211 12233333 33
Q ss_pred EEEccCCchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEECCCCcEEEEcccCCCcCCCC
Q 007496 454 TYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPG 533 (601)
Q Consensus 454 v~l~~~~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffvGVQFHPE~ss~p~ 533 (601)
+.....++++..+.. ... .++.|+|.+++ +..+++.+++|. ..++.+.+.|+ +|||||||.++ +
T Consensus 128 ~~~~~~~~l~~~l~~-~~~--~~~~H~~~v~~---------~~~~~a~~~~g~-~~~~~v~~~~v-~GvQFHPE~s~-~- 191 (211)
T 4gud_A 128 VQVKEGHPLFNGIEP-DAY--FYFVHSFAMPV---------GDYTIAQCEYGQ-PFSAAIQAGNY-YGVQFHPERSS-K- 191 (211)
T ss_dssp CEECTTCGGGTTCCT-TCC--EEEEESEECCC---------CTTEEEEEESSS-EEEEEEEETTE-EEESSCGGGSH-H-
T ss_pred eeeeccChhhcCCCC-CcE--EEEEeeEEeCC---------CCeEEEEecCCC-eEEEEEeCCCE-EEEEccCEecC-c-
Confidence 344444455666553 333 35667887753 234677878887 55566666775 59999999753 2
Q ss_pred CchHHHHHHHHHHhcc
Q 007496 534 KPSPLFLGLIAAACGQ 549 (601)
Q Consensus 534 ~p~pLF~~Fv~aa~~~ 549 (601)
.+..||++|++.|.+.
T Consensus 192 ~G~~ll~nFl~~~ge~ 207 (211)
T 4gud_A 192 AGARLIQNFLELRGEN 207 (211)
T ss_dssp HHHHHHHHHHHC----
T ss_pred cHHHHHHHHHHHhccc
Confidence 3578999999876543
No 13
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=99.91 E-value=5.1e-24 Score=205.11 Aligned_cols=184 Identities=21% Similarity=0.228 Sum_probs=127.6
Q ss_pred eEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCCCCC
Q 007496 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGNR 375 (601)
Q Consensus 298 v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGfG~r 375 (601)
|.|+|++ |... ...++.++|+.+|+++.+ ...+. ++ +.+ .++|||++|||+ ++
T Consensus 1 mmi~iid-~~~~--~~~~~~~~l~~~G~~~~~----~~~~~-~~----------------~~~~~~~~dglil~Gg~-~~ 55 (189)
T 1wl8_A 1 MMIVIMD-NGGQ--YVHRIWRTLRYLGVETKI----IPNTT-PL----------------EEIKAMNPKGIIFSGGP-SL 55 (189)
T ss_dssp CEEEEEE-CSCT--THHHHHHHHHHTTCEEEE----EETTC-CH----------------HHHHHTCCSEEEECCCS-CT
T ss_pred CeEEEEE-CCCc--hHHHHHHHHHHCCCeEEE----EECCC-Ch----------------HHhcccCCCEEEECCCC-Ch
Confidence 3599996 5422 345889999999986533 22211 10 122 469999999998 65
Q ss_pred chhH-HHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCCcccCCCceeeCceeE
Q 007496 376 GVQG-KILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRT 454 (601)
Q Consensus 376 g~eg-~i~aik~are~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~v 454 (601)
...+ ..+.++.+.+.++|+||||+|||+|+.++|+++..++. .++|+ .++
T Consensus 56 ~~~~~~~~~i~~~~~~~~PilGIC~G~Q~l~~~~gg~v~~~~~-----------------------~~~G~------~~~ 106 (189)
T 1wl8_A 56 ENTGNCEKVLEHYDEFNVPILGICLGHQLIAKFFGGKVGRGEK-----------------------AEYSL------VEI 106 (189)
T ss_dssp TCCTTHHHHHHTGGGTCSCEEEETHHHHHHHHHHTCEEEECSC-----------------------CSCEE------EEE
T ss_pred hhhhhHHHHHHHHhhCCCeEEEEcHHHHHHHHHhCCceecCCC-----------------------cccCc------eeE
Confidence 4333 46777777688999999999999999999999865321 13344 233
Q ss_pred EEccCCchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEECCCCcEEEEcccCCCcCCCCC
Q 007496 455 YFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGK 534 (601)
Q Consensus 455 ~l~~~~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffvGVQFHPE~ss~p~~ 534 (601)
.+.++++++..+ +. .+..+|.|..++. .+ +.+++++|++++|. +++++++++| ++|+|||||++..+ +
T Consensus 107 ~~~~~~~l~~~~-~~--~~~~~~~h~~~v~-----~l-~~~~~vla~s~~g~-i~a~~~~~~~-~~gvQfHPE~~~~~-~ 174 (189)
T 1wl8_A 107 EIIDEXEIFKGL-PK--RLKVWESHMDEVK-----EL-PPKFKILARSETCP-IEAMKHEELP-IYGVQFHPEVAHTE-K 174 (189)
T ss_dssp EESCC--CCTTS-CS--EEEEEECCSEEEE-----EC-CTTEEEEEEESSCS-CSEEEESSSC-EEEESSCTTSTTST-T
T ss_pred EEecCchHHhCC-CC--ceEEEEEeeeehh-----hC-CCCcEEEEEcCCCC-EEEEEeCCce-EEEEecCCCcCCCc-c
Confidence 333333444332 22 2334677777653 23 67899999999986 9999999988 66999999998766 4
Q ss_pred chHHHHHHHHHHh
Q 007496 535 PSPLFLGLIAAAC 547 (601)
Q Consensus 535 p~pLF~~Fv~aa~ 547 (601)
+..+|++|+++|.
T Consensus 175 g~~l~~~f~~~~~ 187 (189)
T 1wl8_A 175 GEEILRNFAKLCG 187 (189)
T ss_dssp HHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHh
Confidence 6899999999874
No 14
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=99.90 E-value=2e-24 Score=213.97 Aligned_cols=184 Identities=17% Similarity=0.175 Sum_probs=122.1
Q ss_pred eEEEEEcccCCCcchH-HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCCc
Q 007496 298 VRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 376 (601)
Q Consensus 298 v~IalVGkY~~l~DaY-~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~rg 376 (601)
.+|+|++ |+. .| .++.++|+.+|+++. +.+++.+ .+ ++ + ..++||||||||++++.
T Consensus 25 ~~I~iiD-~g~---~~~~~i~~~l~~~G~~~~----vv~~~~~-~~------------~l-~-~~~~dglil~Gg~~~~~ 81 (218)
T 2vpi_A 25 GAVVILD-AGA---QYGKVIDRRVRELFVQSE----IFPLETP-AF------------AI-K-EQGFRAIIISGGPNSVY 81 (218)
T ss_dssp TCEEEEE-CST---TTTHHHHHHHHHTTCCEE----EECTTCC-HH------------HH-H-HHTCSEEEEEC------
T ss_pred CeEEEEE-CCC---chHHHHHHHHHHCCCEEE----EEECCCC-hH------------HH-h-hcCCCEEEECCCCcccc
Confidence 4799995 653 33 488999999997653 2333321 00 01 1 15799999999987653
Q ss_pred hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCCcccCCCceeeCceeEEE
Q 007496 377 VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYF 456 (601)
Q Consensus 377 ~eg~i~aik~are~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~v~l 456 (601)
.+......+.+++.++|+||||+|||+|+.++|++|..++. .++| .+++.+
T Consensus 82 ~~~~~~~~~~~~~~~~PilGIC~G~Qll~~~~GG~v~~~~~-----------------------~~~G------~~~v~~ 132 (218)
T 2vpi_A 82 AEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHKKSV-----------------------REDG------VFNISV 132 (218)
T ss_dssp ---CCCCCGGGGTSSCCEEEETHHHHHHHHHTTCCEEEEEE-----------------------CSCE------EEEEEE
T ss_pred cccchhHHHHHHHcCCCEEEEcHHHHHHHHHhCCceEeCCC-----------------------Cccc------EEEEEE
Confidence 21111123345678999999999999999999998865321 1233 456766
Q ss_pred ccCCchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEECCCCcEEEEcccCCCcCCCCCch
Q 007496 457 QIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPS 536 (601)
Q Consensus 457 ~~~~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffvGVQFHPE~ss~p~~p~ 536 (601)
.++ +.+.+.++... ...+.|+|.|. .+ +++++++|++ ++ .+++++++++| ++|+|||||++.++. +.
T Consensus 133 ~~~-~~l~~~l~~~~--~v~~~H~~~v~-----~l-~~~~~vlA~s-~~-~i~ai~~~~~~-i~gvQfHPE~~~~~~-g~ 199 (218)
T 2vpi_A 133 DNT-CSLFRGLQKEE--VVLLTHGDSVD-----KV-ADGFKVVARS-GN-IVAGIANESKK-LYGAQFHPEVGLTEN-GK 199 (218)
T ss_dssp CTT-SGGGTTCCSEE--EEEECSEEEES-----SC-CTTCEEEEEE-TT-EEEEEEETTTT-EEEESSCTTSTTSTT-HH
T ss_pred ccC-ChhHhcCCCCc--EEeehhhhHhh-----hc-CCCCEEEEEc-CC-eEEEEEECCCC-EEEEEcCCCCCCChh-HH
Confidence 665 34444443233 34677999985 23 6789999998 55 59999998888 569999999998764 78
Q ss_pred HHHHHHH-HHH
Q 007496 537 PLFLGLI-AAA 546 (601)
Q Consensus 537 pLF~~Fv-~aa 546 (601)
+||++|+ ++|
T Consensus 200 ~l~~~F~~~~~ 210 (218)
T 2vpi_A 200 VILKNFLYDIA 210 (218)
T ss_dssp HHHHHHHTTTT
T ss_pred HHHHHHHHHHh
Confidence 9999999 554
No 15
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=99.90 E-value=1.4e-23 Score=218.86 Aligned_cols=205 Identities=17% Similarity=0.166 Sum_probs=128.1
Q ss_pred ceEEEEEcccCCCc------chH--HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEE
Q 007496 297 PVRIAMVGKYTGLS------DAY--LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILV 368 (601)
Q Consensus 297 ~v~IalVGkY~~l~------DaY--~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlv 368 (601)
++.|||........ -.| .|+.++|+.+|+.+.+ .+.+.+ + ..+.+.+.++|||||
T Consensus 30 ~P~IGI~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~v----v~~~~~----------~---~~i~~~l~~~dglil 92 (315)
T 1l9x_A 30 KPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVP----VRLDLT----------E---KDYEILFKSINGILF 92 (315)
T ss_dssp CCEEEEECEECCSHHHHTTCSEEEEHHHHHHHHHTTCEEEE----ECSSCC----------H---HHHHHHHHHSSEEEE
T ss_pred CCEEEEECCcccccccccCcceehHHHHHHHHHHCCCEEEE----EecCCC----------H---HHHHHHHhcCCEEEE
Confidence 46899997543211 112 3789999999976433 333321 0 012234678999999
Q ss_pred CCCCCCCchh----HHHHHHHHHHHc-----CCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCC
Q 007496 369 PGGFGNRGVQ----GKILAAKYAREH-----RIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGS 439 (601)
Q Consensus 369 pGGfG~rg~e----g~i~aik~are~-----~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~ 439 (601)
|||+++.... ....+++.+++. ++|+||||+|||+|+.++|+++.... +
T Consensus 93 ~GG~~~v~p~~~~~~~~~l~~~~~~~~~~g~~~PiLGIC~G~Qll~~a~GG~~~~~~------~---------------- 150 (315)
T 1l9x_A 93 PGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTA------T---------------- 150 (315)
T ss_dssp CCCCCCTTTCHHHHHHHHHHHHHHHHHHTTCCCCEEEETHHHHHHHHHHHSSCCCEE------E----------------
T ss_pred eCCCcccChhhhhHHHHHHHHHHHHHHhcCCCceEEEEChHHHHHHHHhCCcccccc------c----------------
Confidence 9999874211 112345555554 69999999999999999999864211 1
Q ss_pred cccCCCceeeCceeEEEc---cCCchhhhccCC-------ceeEeeeeceeeeeChhhHhh--hccCCeEEEEEeCCCCe
Q 007496 440 KTHMGGTMRLGSRRTYFQ---IKDCKSAKLYGN-------RTFIDERHRHRYEVNPDMIAR--LENAGLSFTGKDETSQR 507 (601)
Q Consensus 440 ~~h~GgtmrLG~~~v~l~---~~~s~l~~lyg~-------~~~I~erhrHrYeVn~~~v~~--le~~Gl~~~g~s~dg~~ 507 (601)
...|. ..|+... ++ +.+.+.++. ...+.. ++|+|+|++++++. ..+.|++++|+++||.
T Consensus 151 -~~~g~-----~~p~~~~~~~~~-s~L~~~~~~~~~~~l~~~~~~~-~~H~~~V~~~~~~~~~~l~~g~~v~A~s~dg~- 221 (315)
T 1l9x_A 151 -DTVDV-----AMPLNFTGGQLH-SRMFQNFPTELLLSLAVEPLTA-NFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGK- 221 (315)
T ss_dssp -EEEEE-----EECCEECSTTTT-CSTTTTSCHHHHHHHHHSCCEE-EEEEEECBHHHHHTCHHHHHHEEEEEEEESSS-
T ss_pred -cccCC-----CCCeeeccCCCC-ChHHHhcChhhhhhccccceEE-EhhhhhcCccccccccccCCCCEEEEEcCCCC-
Confidence 00111 1233322 23 333333321 112333 48999999877654 2267899999999986
Q ss_pred EEEE---EECCCCcEEEEcccCCCcC---C-----CC------CchHHHHHHHHHHhcch
Q 007496 508 MEIV---ELPNHPYFIGVQFHPEYKS---R-----PG------KPSPLFLGLIAAACGQL 550 (601)
Q Consensus 508 vE~I---E~~~hpffvGVQFHPE~ss---~-----p~------~p~pLF~~Fv~aa~~~~ 550 (601)
+|++ +++++| ++|||||||+++ + |+ +..+||++|+++|.+..
T Consensus 222 ve~i~~i~~~~~~-i~GVQfHPE~~~~e~~~~~~~p~s~~a~~~~~~lf~~Fv~~a~~~~ 280 (315)
T 1l9x_A 222 IEFISTMEGYKYP-VYGVQWHPEKAPYEWKNLDGISHAPNAVKTAFYLAEFFVNEARKNN 280 (315)
T ss_dssp CEEEEEEEESSSC-EEEESSCTTHHHHCCSSCTTCCCCHHHHHHHHHHHHHHHHHHTTSC
T ss_pred EEEEEEeccCCCC-EEEEEeCCCCCcccccccccCCccHHHHHHHHHHHHHHHHHHHhcc
Confidence 6666 556566 669999999975 2 33 23599999999997644
No 16
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=99.89 E-value=2.8e-23 Score=231.76 Aligned_cols=213 Identities=19% Similarity=0.255 Sum_probs=143.7
Q ss_pred eEEEEEcccCCCcchHH-HHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCCCC
Q 007496 298 VRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGN 374 (601)
Q Consensus 298 v~IalVGkY~~l~DaY~-SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGfG~ 374 (601)
-+|+|+ ||++ .|. +|.++|+.+|+.+.+ .+.+.+ + +.+ .++|||||||||++
T Consensus 8 ~~Ilil-D~Gs---~~~~~I~r~lre~Gv~~ei----v~~~~~-~----------------~~i~~~~~dgIIlsGGp~s 62 (556)
T 3uow_A 8 DKILVL-NFGS---QYFHLIVKRLNNIKIFSET----KDYGVE-L----------------KDIKDMNIKGVILSGGPYS 62 (556)
T ss_dssp CEEEEE-ESSC---TTHHHHHHHHHHTTCCEEE----EETTCC-G----------------GGTTTSCEEEEEECCCSCC
T ss_pred CEEEEE-ECCC---ccHHHHHHHHHHCCCeEEE----EECCCC-H----------------HHHhhcCCCEEEECCCCCc
Confidence 589999 5874 454 899999999988644 333211 1 122 38899999999988
Q ss_pred CchhH----HHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCC-------C---CCCeeeeCCCCCc
Q 007496 375 RGVQG----KILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPN-------T---KNPCVIFMPEGSK 440 (601)
Q Consensus 375 rg~eg----~i~aik~are~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~-------~---~~pvi~~mpe~~~ 440 (601)
+..++ ...+++++.+.++|+||||+|||+|+.++|++|.... +.|++.. . .+|++..|++..
T Consensus 63 ~~~~~~~~~~~~l~~~a~~~g~PvLGIC~G~QlLa~~lGG~V~~~~---~~E~G~~~l~~~~~~~~~~~p~v~~~~~~~- 138 (556)
T 3uow_A 63 VTEAGSPHLKKEVFEYFLEKKIPIFGICYGMQEIAVQMNGEVKKSK---TSEYGCTDVNILRNDNINNITYCRNFGDSS- 138 (556)
T ss_dssp TTSTTCCCCCHHHHHHHHHTTCCEEEETHHHHHHHHHTTCEEEEEE---EEEEEEEEEEECCTTGGGGCSGGGGC---C-
T ss_pred ccccCCcchhHHHHHHhhhcCCCEEEECHHHHHHHHHhCCcEecCC---CcccCCcceeeccCcccccccceecccccc-
Confidence 64332 2245677778899999999999999999999986432 3343311 1 245555555432
Q ss_pred ccCCCceeeCceeEEEccCCchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEECCCCcEE
Q 007496 441 THMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFI 520 (601)
Q Consensus 441 ~h~GgtmrLG~~~v~l~~~~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffv 520 (601)
.||||. ...+.+...++++..+++.. ...++.|+|.|. .+ +.|++++|.++++. +++++++++++ +
T Consensus 139 ~~mg~~----~n~~~~~~~~~Lf~gl~~~~--~~v~~~H~d~V~-----~l-p~g~~vlA~s~~~~-i~ai~~~~~~i-~ 204 (556)
T 3uow_A 139 SAMDLY----SNYKLMNETCCLFENIKSDI--TTVWMNHNDEVT-----KI-PENFYLVSSSENCL-ICSIYNKEYNI-Y 204 (556)
T ss_dssp CHHHHH----TTSCCCC--CGGGTTCCSSE--EEEEEEEEEEEE-----EC-CTTCEEEEEETTEE-EEEEEETTTTE-E
T ss_pred cccccc----cccccccccchhhcccccCc--eEEEEEccceee-----cc-CCCcEEEEEeCCCC-EEEEEECCCCE-E
Confidence 455552 11122222335666664322 345677887763 23 67999999999885 99999998885 5
Q ss_pred EEcccCCCcCCCCCchHHHHHHHHHHhcchhhhh
Q 007496 521 GVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLI 554 (601)
Q Consensus 521 GVQFHPE~ss~p~~p~pLF~~Fv~aa~~~~~~~~ 554 (601)
|+|||||+++.| .+.++|++|+..++++...|.
T Consensus 205 GvQFHPE~~~~~-~G~~ll~nFl~~i~g~~~~~~ 237 (556)
T 3uow_A 205 GVQYHPEVYESL-DGELMFYNFAYNICKCKKQFD 237 (556)
T ss_dssp EESSCTTSTTST-THHHHHHHHHTTTTCCCC-CC
T ss_pred EEEcCCCCCccc-cchHHHHHHHHHhhccccccc
Confidence 999999999887 589999999977766554443
No 17
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=99.89 E-value=2.4e-23 Score=235.59 Aligned_cols=181 Identities=14% Similarity=0.139 Sum_probs=128.1
Q ss_pred ceEEEEEcccCCCcchH-HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCC
Q 007496 297 PVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 375 (601)
Q Consensus 297 ~v~IalVGkY~~l~DaY-~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~r 375 (601)
..+|+|++.|. +| .++.++|+..|+.+. +.+.+.+ ..+.++|||||+||||++
T Consensus 446 Gk~IlviD~gd----sf~~~l~~~l~~~G~~v~----Vv~~d~~------------------~~~~~~DgIIlsGGPg~p 499 (645)
T 3r75_A 446 GCRALIVDAED----HFTAMIAQQLSSLGLATE----VCGVHDA------------------VDLARYDVVVMGPGPGDP 499 (645)
T ss_dssp TCEEEEEESSC----THHHHHHHHHHHTTCEEE----EEETTCC------------------CCGGGCSEEEECCCSSCT
T ss_pred CCEEEEEECCc----cHHHHHHHHHHHCCCEEE----EEECCCc------------------ccccCCCEEEECCCCCCh
Confidence 35899996443 44 378899999887643 3444432 124578999999999997
Q ss_pred chh------HHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCCcccCCCceee
Q 007496 376 GVQ------GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRL 449 (601)
Q Consensus 376 g~e------g~i~aik~are~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrL 449 (601)
... .++.+++++++.++|+||||||||+|+.+||++|.+.+. +++|+
T Consensus 500 ~d~~~p~i~~~~~lI~~a~~~~iPiLGIClG~QlLa~alGG~V~~~~~-----------------------~~~G~---- 552 (645)
T 3r75_A 500 SDAGDPRIARLYAWLRHLIDEGKPFMAVCLSHQILNAILGIPLVRREV-----------------------PNQGI---- 552 (645)
T ss_dssp TCTTSHHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEEEEE-----------------------EEEEE----
T ss_pred hhhhhhhHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHhCCEEEcCCC-----------------------ccccc----
Confidence 643 357789999999999999999999999999999965321 23344
Q ss_pred CceeEEEccCCchhhhccCCceeEeeeeceeeeeCh--hh-HhhhccCCeEEEEEeCCCCeEEEEEECCCCcEEEEcccC
Q 007496 450 GSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNP--DM-IARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHP 526 (601)
Q Consensus 450 G~~~v~l~~~~s~l~~lyg~~~~I~erhrHrYeVn~--~~-v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffvGVQFHP 526 (601)
++++.+... +++..+| |+|.++. +. ...+ +.|++++++++++. ++++++++ ++||||||
T Consensus 553 -~~~i~~~~~-~l~~~~~-----------~~~~v~~~h~~~~~~l-p~g~~v~A~s~dg~-i~Ai~~~~---~~GVQFHP 614 (645)
T 3r75_A 553 -QVEIDLFGQ-RERVGFY-----------NTYVAQTVRDEMDVDG-VGTVAISRDPRTGE-VHALRGPT---FSSMQFHA 614 (645)
T ss_dssp -EEEEEETTE-EEEEEEE-----------EEEEEBCSCSEEEETT-TEEEEEEECTTTCB-EEEEEETT---EEEESSBT
T ss_pred -ceEEeeecC-cceecCC-----------CcEEEEEehhhccccC-CCCeEEEEEcCCCc-EEEEEcCC---EEEEEeCC
Confidence 334443321 3333333 3333321 11 1123 67899999998886 99999764 57999999
Q ss_pred CCcCCCCCchHHHHHHHHHHhcc
Q 007496 527 EYKSRPGKPSPLFLGLIAAACGQ 549 (601)
Q Consensus 527 E~ss~p~~p~pLF~~Fv~aa~~~ 549 (601)
|+...+. +++||++|++.+...
T Consensus 615 E~~~t~~-G~~Ll~nFl~~~~~~ 636 (645)
T 3r75_A 615 ESVLTVD-GPRILGEAITHAIRR 636 (645)
T ss_dssp TSTTCTT-HHHHHHHHHHHHTTT
T ss_pred eecCCcc-hHHHHHHHHHHHHhc
Confidence 9988875 899999999988654
No 18
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=99.89 E-value=5.5e-23 Score=197.19 Aligned_cols=183 Identities=15% Similarity=0.192 Sum_probs=114.6
Q ss_pred eEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCCch
Q 007496 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 377 (601)
Q Consensus 298 v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~rg~ 377 (601)
|||+|++- .++|.+++++|+.+|+++.+ ++.+ +.+.++|||++|||++++..
T Consensus 1 m~i~vl~~----~g~~~~~~~~l~~~G~~~~~------~~~~------------------~~~~~~dglil~GG~~~~~~ 52 (186)
T 2ywj_A 1 MIIGVLAI----QGDVEEHEEAIKKAGYEAKK------VKRV------------------EDLEGIDALIIPGGESTAIG 52 (186)
T ss_dssp CEEEEECS----SSCCHHHHHHHHHTTSEEEE------ECSG------------------GGGTTCSEEEECCSCHHHHH
T ss_pred CEEEEEec----CcchHHHHHHHHHCCCEEEE------ECCh------------------HHhccCCEEEECCCCchhhh
Confidence 58999952 45888999999999975422 2221 24678899999999875431
Q ss_pred hH--HHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCCcccCCCceeeCceeEE
Q 007496 378 QG--KILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTY 455 (601)
Q Consensus 378 eg--~i~aik~are~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~v~ 455 (601)
+- ....++.+++.++|+||||+|||+|+.++|+++-++.- + +..+ ..++ .|.+ .+.+...
T Consensus 53 ~~~~~~~~~~~i~~~~~PilGIC~G~Qll~~~~gg~~~~lg~-----~----~~~~-~~~~------~~~~--~~~~~~~ 114 (186)
T 2ywj_A 53 KLMKKYGLLEKIKNSNLPILGTCAGMVLLSKGTGINQILLEL-----M----DITV-KRNA------YGRQ--VDSFEKE 114 (186)
T ss_dssp HHHHHTTHHHHHHTCCCCEEEETHHHHHHSSCCSSCCCCCCC-----S----SEEE-ETTT------TCSS--SCCEEEE
T ss_pred hhhhccCHHHHHHhcCCcEEEECHHHHHHHHHhCCCcCccCC-----C----ceeE-Eecc------CCCc--ccceecc
Confidence 10 11123334478999999999999999998877522110 0 0000 0000 0110 0111111
Q ss_pred EccCCchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEECCCCcEEEEcccCCCcCCCCCc
Q 007496 456 FQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKP 535 (601)
Q Consensus 456 l~~~~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffvGVQFHPE~ss~p~~p 535 (601)
.++..+ ..+...+.|+|.|+ .+++.+++++|++ |+. +|+++. ++++|+|||||+++ ++
T Consensus 115 -----~~~~~~----~~~~~~~~H~~~v~-----~l~~~~~~v~a~s-d~~-~~a~~~---~~~~gvQfHPE~~~---~g 172 (186)
T 2ywj_A 115 -----IEFKDL----GKVYGVFIRAPVVD-----KILSDDVEVIARD-GDK-IVGVKQ---GKYMALSFHPELSE---DG 172 (186)
T ss_dssp -----EEETTT----EEEEEEESSCCEEE-----EECCTTCEEEEEE-TTE-EEEEEE---TTEEEESSCGGGST---TH
T ss_pred -----cccccC----CcEEEEEEecceee-----ecCCCCeEEEEEE-CCE-EEEEee---CCEEEEECCCCcCC---ch
Confidence 122222 12233556887774 2225789999998 654 899986 35789999999876 36
Q ss_pred hHHHHHHHHHHhc
Q 007496 536 SPLFLGLIAAACG 548 (601)
Q Consensus 536 ~pLF~~Fv~aa~~ 548 (601)
.++|++|+++|.+
T Consensus 173 ~~l~~~F~~~~~~ 185 (186)
T 2ywj_A 173 YKVYKYFVENCVK 185 (186)
T ss_dssp HHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHhh
Confidence 8999999998754
No 19
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=99.89 E-value=2.5e-23 Score=230.72 Aligned_cols=195 Identities=19% Similarity=0.265 Sum_probs=132.6
Q ss_pred eEEEEEcccCCCcchHH-HHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCCc
Q 007496 298 VRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 376 (601)
Q Consensus 298 v~IalVGkY~~l~DaY~-SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~rg 376 (601)
.+|+|+ +|++ .|. ++.++|+.+|+.+.+. +...+.+++. -.++|||||||||++..
T Consensus 11 ~~I~Il-D~g~---~~~~~i~r~lr~~Gv~~~i~--p~~~~~~~i~-----------------~~~~dgIILsGGp~sv~ 67 (527)
T 3tqi_A 11 HRILIL-DFGS---QYAQLIARRVREIGVYCELM--PCDIDEETIR-----------------DFNPHGIILSGGPETVT 67 (527)
T ss_dssp SEEEEE-ECSC---TTHHHHHHHHHHHTCEEEEE--ETTCCSSSST-----------------TTCCSEEEECCCCC---
T ss_pred CeEEEE-ECCC---ccHHHHHHHHHHCCCeEEEE--ECCCCHHHHH-----------------hcCCCEEEECCcCcccc
Confidence 589999 4763 454 8999999999886542 1112222111 12679999999999876
Q ss_pred hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCCcccCCCceeeCceeEEE
Q 007496 377 VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYF 456 (601)
Q Consensus 377 ~eg~i~aik~are~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~v~l 456 (601)
.++...+.+.+.+.++|+||||+|||+|+.++|++|...+ . .+ +|.+.+.+
T Consensus 68 ~~~~~~~~~~~~~~~~PvLGIC~G~Qlla~~lGG~V~~~~---~--------------------~e------~G~~~v~~ 118 (527)
T 3tqi_A 68 LSHTLRAPAFIFEIGCPVLGICYGMQTMAYQLGGKVNRTA---K--------------------AE------FGHAQLRV 118 (527)
T ss_dssp ------CCCSTTTSSSCEEEETHHHHHHHHHSSSCBC----------------------------C------EEEEEEEE
T ss_pred cCCChhhHHHHHhcCCCEEEEChHHHHHHHHcCCeEEeCC---C--------------------cc------ccceEEEE
Confidence 5555556667778899999999999999999999985421 0 12 23455666
Q ss_pred ccCCchhhhccCC-----ceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEECCCCcEEEEcccCCCcCC
Q 007496 457 QIKDCKSAKLYGN-----RTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSR 531 (601)
Q Consensus 457 ~~~~s~l~~lyg~-----~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffvGVQFHPE~ss~ 531 (601)
.+++.++..+... ......++.|+|.|. .+ +.|++++|.++++. +++++++++|+ +|+|||||++..
T Consensus 119 ~~~~~l~~~l~~~~~~~~~~~~~v~~~H~d~v~-----~l-p~g~~v~A~s~~~~-i~ai~~~~~~~-~GvQFHPE~~~t 190 (527)
T 3tqi_A 119 LNPAFLFDGIEDQVSPQGEPLLDVWMSHGDIVS-----EL-PPGFEATACTDNSP-LAAMADFKRRF-FGLQFHPEVTHT 190 (527)
T ss_dssp SSCTTTTSSCCSBCCTTSCCEEEEEEESSSCBC-----SC-CTTCEEEEEETTEE-EEEEECSSSCE-EEESBCSSSTTS
T ss_pred cCCChhhcCCccccccccccceEEEEEcccchh-----cc-CCCCEEEEEeCCCc-EEEEEcCCCCE-EEEEeccccccc
Confidence 5554555555421 113345677888774 23 77999999998765 99999998885 599999999988
Q ss_pred CCCchHHHHHHHHHHhcchhhh
Q 007496 532 PGKPSPLFLGLIAAACGQLDTL 553 (601)
Q Consensus 532 p~~p~pLF~~Fv~aa~~~~~~~ 553 (601)
|. +..+|.+|+..++++...|
T Consensus 191 ~~-G~~ll~nF~~~i~~~~~~w 211 (527)
T 3tqi_A 191 PQ-GHRILAHFVIHICQCIPNW 211 (527)
T ss_dssp TT-HHHHHHHHHHTTSCCCCCC
T ss_pred cc-cchhhhhhhhhcccccchh
Confidence 74 7899999998777665544
No 20
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=99.88 E-value=6.7e-22 Score=191.12 Aligned_cols=188 Identities=18% Similarity=0.162 Sum_probs=118.4
Q ss_pred eEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhcc--CCCEEEECCCCCCC
Q 007496 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK--GADGILVPGGFGNR 375 (601)
Q Consensus 298 v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~--~~DGIlvpGGfG~r 375 (601)
++|+||+.|.+. -.++.++|+.+|+++.+ .+.+.+ ++ +..+.+. +.|++|++||+|++
T Consensus 1 ~~i~iiDn~~s~---~~~i~~~l~~~G~~~~v----~~~~~~-~~------------~i~~~l~~~~~~~iil~gGpg~~ 60 (192)
T 1i1q_B 1 ADILLLDNIDSF---TWNLADQLRTNGHNVVI----YRNHIP-AQ------------TLIDRLATMKNPVLMLSPGPGVP 60 (192)
T ss_dssp CEEEEEECSCSS---HHHHHHHHHHTTCEEEE----EETTSC-SH------------HHHHHHTTCSSEEEEECCCSSCG
T ss_pred CcEEEEECCccH---HHHHHHHHHHCCCeEEE----EECCCC-HH------------HHHHHhhhccCCeEEECCCCcCc
Confidence 479999866543 24779999999876533 232211 10 1112222 35679999999997
Q ss_pred chhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCCcccCCCceeeCceeEE
Q 007496 376 GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTY 455 (601)
Q Consensus 376 g~eg~i~aik~are~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~v~ 455 (601)
...+....+..+.+.++|+||||+|||+|+.++|+++..... . ..|.. ...
T Consensus 61 ~~~~~~~~l~~~~~~~~PilGIC~G~Qll~~~~Gg~v~~~~~---~--------------------~~g~~------~~~ 111 (192)
T 1i1q_B 61 SEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAGE---I--------------------LHGKA------TSI 111 (192)
T ss_dssp GGSTTHHHHHHHHBTTBCEEEETHHHHHHHHHTSCCCCC------C--------------------CSSEE------EEE
T ss_pred hhCchHHHHHHHHhcCCCEEEECcChHHHHHHhCCEEEeCCC---c--------------------Eecce------eEE
Confidence 654444444344567899999999999999999987743210 0 11211 111
Q ss_pred EccCCchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEECCCCcEEEEcccCCCcCCCCCc
Q 007496 456 FQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKP 535 (601)
Q Consensus 456 l~~~~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffvGVQFHPE~ss~p~~p 535 (601)
...+++++..+- .. ....+.|+|.+. .+ +.++++++. .++ .++++++++.| ++|+|||||++..+ .+
T Consensus 112 ~~~~~~l~~~~~-~~--~~v~~~H~~~v~-----~l-p~~~~v~a~-~~~-~~~ai~~~~~~-~~gvQfHPE~~~~~-~g 178 (192)
T 1i1q_B 112 EHDGQAMFAGLA-NP--LPVARYHSLVGS-----NV-PAGLTINAH-FNG-MVMAVRHDADR-VCGFQFHPESILTT-QG 178 (192)
T ss_dssp EECCCGGGTTSC-SS--EEEEECCC---C-----CC-CTTCEEEEE-ETT-EEEEEEETTTT-EEEESSBTTSTTCT-TH
T ss_pred ecCCChHHhcCC-CC--cEEEechhhHhh-----hC-CCccEEEEC-CCC-cEEEEEECCCC-EEEEEccCcccCCc-cc
Confidence 122224444442 22 345677887764 23 678889885 445 49999998888 56999999999776 47
Q ss_pred hHHHHHHHHHHh
Q 007496 536 SPLFLGLIAAAC 547 (601)
Q Consensus 536 ~pLF~~Fv~aa~ 547 (601)
..+|++|++.+.
T Consensus 179 ~~il~nf~~~~~ 190 (192)
T 1i1q_B 179 ARLLEQTLAWAQ 190 (192)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 899999998764
No 21
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=99.88 E-value=4e-22 Score=199.86 Aligned_cols=189 Identities=17% Similarity=0.152 Sum_probs=128.6
Q ss_pred hcCCCCceEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecC-CCcccccccCCchhhhHHHHhccCCCEEEEC
Q 007496 291 CDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPA-CDLEDATEKENPDAYKAAWKLLKGADGILVP 369 (601)
Q Consensus 291 ~~~~~~~v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s-~~le~~~~~~~p~~y~~a~~~L~~~DGIlvp 369 (601)
+......++|.++-.+. .. +-.++.++|+..|+++.+ ...+. +.+. +.+.++||||||
T Consensus 6 ~~~~~~~~~~~~i~~~~-~~-~~~~i~~~l~~~G~~v~v----~~~~~~~~~~---------------~~l~~~Dglil~ 64 (239)
T 1o1y_A 6 IHHHHHHVRVLAIRHVE-IE-DLGMMEDIFREKNWSFDY----LDTPKGEKLE---------------RPLEEYSLVVLL 64 (239)
T ss_dssp ----CCCCEEEEECSST-TS-SCTHHHHHHHHTTCEEEE----ECGGGTCCCS---------------SCGGGCSEEEEC
T ss_pred cccccceeEEEEEECCC-CC-CchHHHHHHHhCCCcEEE----eCCcCccccc---------------cchhcCCEEEEC
Confidence 33445679999995443 22 334788899999876532 22222 1111 346789999999
Q ss_pred CCCCCCc-------hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCCccc
Q 007496 370 GGFGNRG-------VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTH 442 (601)
Q Consensus 370 GGfG~rg-------~eg~i~aik~are~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h 442 (601)
||++++. ....+.+++++.++++|+||||+|||+|+.++|++|...+.
T Consensus 65 GG~~~~~~~~~~~~l~~~~~~i~~~~~~~~PiLGIC~G~QlL~~alGG~v~~~~~------------------------- 119 (239)
T 1o1y_A 65 GGYMGAYEEEKYPFLKYEFQLIEEILKKEIPFLGICLGSQMLAKVLGASVYRGKN------------------------- 119 (239)
T ss_dssp CCSCCTTCTTTCTHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEECTT-------------------------
T ss_pred CCCccccCCccChhHHHHHHHHHHHHHCCCCEEEEchhHHHHHHHcCCeEecCCC-------------------------
Confidence 9986542 23577889999999999999999999999999998864320
Q ss_pred CCCceeeCceeEEEccCCchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEECCCCcEEEE
Q 007496 443 MGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGV 522 (601)
Q Consensus 443 ~GgtmrLG~~~v~l~~~~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffvGV 522 (601)
|. ..|.+++...+++.++ +.++. .+...|.|+|.+. + +.+++++|+++++. +|+++..+ ++|+
T Consensus 120 -g~--~~G~~~v~~~~~~~l~-~~~~~--~~~~~~~H~~~v~------l-p~~~~vlA~s~~~~-iea~~~~~---i~gv 182 (239)
T 1o1y_A 120 -GE--EIGWYFVEKVSDNKFF-REFPD--RLRVFQWHGDTFD------L-PRRATRVFTSEKYE-NQGFVYGK---AVGL 182 (239)
T ss_dssp -CC--EEEEEEEEECCCCGGG-TTSCS--EEEEEEEESEEEC------C-CTTCEEEEECSSCS-CSEEEETT---EEEE
T ss_pred -CC--ccccEEEEECCCCchH-HhCCC--CceeEeecCCccc------c-CCCCEEEEEcCCCC-EEEEEECC---EEEE
Confidence 11 1245666655553333 33332 2456788998872 2 67899999998876 89999874 6799
Q ss_pred cccCCCcCCCCCchHHHHHHHHHHhc
Q 007496 523 QFHPEYKSRPGKPSPLFLGLIAAACG 548 (601)
Q Consensus 523 QFHPE~ss~p~~p~pLF~~Fv~aa~~ 548 (601)
|||||++. .++.+|++....
T Consensus 183 QfHPE~~~------~~~~~~~~~~~~ 202 (239)
T 1o1y_A 183 QFHIEVGA------RTMKRWIEAYKD 202 (239)
T ss_dssp SSBSSCCH------HHHHHHHHHTHH
T ss_pred EeCccCCH------HHHHHHHHHhHH
Confidence 99999953 488888876543
No 22
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=99.87 E-value=7.6e-23 Score=226.76 Aligned_cols=189 Identities=17% Similarity=0.271 Sum_probs=129.9
Q ss_pred eEEEEEcccCCCcchHH-HHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCCCC
Q 007496 298 VRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGN 374 (601)
Q Consensus 298 v~IalVGkY~~l~DaY~-SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGfG~ 374 (601)
.+|+|++ |+. .|. ++.++|+.+|+.+.+ .+.+.+ + +.+ .++|||||||||++
T Consensus 8 ~~IlIlD-~g~---~~~~~i~r~lr~~G~~~~i----~p~~~~----------~-------~~i~~~~~dgiILsGGp~s 62 (525)
T 1gpm_A 8 HRILILD-FGS---QYTQLVARRVRELGVYCEL----WAWDVT----------E-------AQIRDFNPSGIILSGGPES 62 (525)
T ss_dssp SEEEEEE-CSC---TTHHHHHHHHHHTTCEEEE----EESCCC----------H-------HHHHHHCCSEEEECCCSSC
T ss_pred CEEEEEE-CCC---ccHHHHHHHHHHCCCEEEE----EECCCC----------H-------HHHhccCCCEEEECCcCcc
Confidence 5899994 774 444 788999999987543 222221 1 112 26799999999987
Q ss_pred CchhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCCcccCCCceeeCceeE
Q 007496 375 RGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRT 454 (601)
Q Consensus 375 rg~eg~i~aik~are~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~v 454 (601)
...++.....+.+.+.++|+||||+|||+|+.++|++|.+.+ .. + +|.+.+
T Consensus 63 ~~~~~~~~~~~~~~~~g~PvLGIC~G~Qlla~~~GG~V~~~~---~~--------------------e------~G~~~v 113 (525)
T 1gpm_A 63 TTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEASN---ER--------------------E------FGYAQV 113 (525)
T ss_dssp TTSTTCCCCCGGGGTSSSCEEEETHHHHHHHHHHTCEEECCS---SC--------------------E------EEEEEE
T ss_pred ccccCCcchHHHHHHCCCCEEEEChHHHHHHHHcCCEEEeCC---Cc--------------------c------cceEEE
Confidence 543221122355667899999999999999999999996532 11 1 233445
Q ss_pred EEccCCchhhhccCCc------eeEeeeeceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEECCCCcEEEEcccCCC
Q 007496 455 YFQIKDCKSAKLYGNR------TFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEY 528 (601)
Q Consensus 455 ~l~~~~s~l~~lyg~~------~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffvGVQFHPE~ 528 (601)
.+.+++.++..+- .. .....++.|+|.|. .+ ++|++++|.++++. ++++++++++ ++|+|||||+
T Consensus 114 ~~~~~~~L~~~l~-~~~~~~~~~~~~v~~~H~~~V~-----~l-p~g~~v~A~s~~~~-i~ai~~~~~~-i~gvQFHPE~ 184 (525)
T 1gpm_A 114 EVVNDSALVRGIE-DALTADGKPLLDVWMSHGDKVT-----AI-PSDFITVASTESCP-FAIMANEEKR-FYGVQFHPEV 184 (525)
T ss_dssp EECSCCTTTTTCC-SEECTTSCEEEEEEEEECSEEE-----EC-CTTCEEEEECSSCS-CSEEEETTTT-EEEESBCTTS
T ss_pred EeCCCCHhhccCc-cccccccccceEEEEEccceee-----eC-CCCCEEEEECCCCC-EEEEEECCCC-EEEEecCCCC
Confidence 5544433444332 20 02234566777764 34 78999999999886 9999998887 5699999999
Q ss_pred cCCCCCchHHHHHHHHHHhcch
Q 007496 529 KSRPGKPSPLFLGLIAAACGQL 550 (601)
Q Consensus 529 ss~p~~p~pLF~~Fv~aa~~~~ 550 (601)
+..|. +..+|.+|+..++++.
T Consensus 185 ~~~~~-g~~ll~nF~~~i~~~~ 205 (525)
T 1gpm_A 185 THTRQ-GMRMLERFVRDICQCE 205 (525)
T ss_dssp TTSTT-HHHHHHHHHHTTSCCC
T ss_pred Ccchh-HHHHHHHHHHhhhhcc
Confidence 98875 8999999997665444
No 23
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=99.86 E-value=3.4e-21 Score=187.58 Aligned_cols=187 Identities=17% Similarity=0.146 Sum_probs=124.1
Q ss_pred eEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCCc-
Q 007496 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG- 376 (601)
Q Consensus 298 v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~rg- 376 (601)
++|+|+. |.... ...++.++|+.+|+++.+ +... +.+.++||||||||++...
T Consensus 3 ~~i~il~-~~~~~-~~~~~~~~l~~~g~~~~~------~~~~------------------~~~~~~d~lil~Gg~~~~~~ 56 (213)
T 3d54_D 3 PRACVVV-YPGSN-CDRDAYHALEINGFEPSY------VGLD------------------DKLDDYELIILPGGFSYGDY 56 (213)
T ss_dssp CEEEEEC-CTTEE-EHHHHHHHHHTTTCEEEE------ECTT------------------CCCSSCSEEEECEECGGGGC
T ss_pred cEEEEEE-cCCCC-ccHHHHHHHHHCCCEEEE------EecC------------------CCcccCCEEEECCCCchhhh
Confidence 5899994 65442 235789999999875432 2211 1256889999999965321
Q ss_pred --------hhHHHHHHHHHHHcCCCEEEEehhHHHHHHH--hccccccccCCCCCccCCCCCCCeeeeCCCCCcccCCCc
Q 007496 377 --------VQGKILAAKYAREHRIPYLGICLGMQVAVIE--FARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGT 446 (601)
Q Consensus 377 --------~eg~i~aik~are~~iP~LGICLGmQllaie--fgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~Ggt 446 (601)
....+..++.+.++++|+||||+|||+|+.+ ++++|...+ . ...|.|
T Consensus 57 ~~~~~~~~~~~~~~~l~~~~~~~~pilgIC~G~qlLa~aGll~g~v~~~~--------------------~-~~~~~g-- 113 (213)
T 3d54_D 57 LRPGAVAAREKIAFEIAKAAERGKLIMGICNGFQILIEMGLLKGALLQNS--------------------S-GKFICK-- 113 (213)
T ss_dssp SSTTHHHHTSTTHHHHHHHHHHTCEEEECHHHHHHHHHHTSSCSEEECCS--------------------S-SSCBCC--
T ss_pred hccccccccHHHHHHHHHHHHCCCEEEEECHHHHHHHHcCCCCCCeecCC--------------------C-CceEee--
Confidence 2356778888888899999999999999987 555442210 0 001333
Q ss_pred eeeCceeEEEc-cCCchhhhccCCceeEeeeece---eeeeChhhHhhhccCCeEEEEEeCC--C--CeEEEEEECCCCc
Q 007496 447 MRLGSRRTYFQ-IKDCKSAKLYGNRTFIDERHRH---RYEVNPDMIARLENAGLSFTGKDET--S--QRMEIVELPNHPY 518 (601)
Q Consensus 447 mrLG~~~v~l~-~~~s~l~~lyg~~~~I~erhrH---rYeVn~~~v~~le~~Gl~~~g~s~d--g--~~vE~IE~~~hpf 518 (601)
.+++.+. ++ +.+.+.++....+.....| +|.+.+ .++.+++++++ | ..+|+++.++.+
T Consensus 114 ----~~~v~~~~~~-~~l~~~~~~~~~~~~~~~H~~~s~~~~~--------~~~~~~a~~~~~ng~~~~i~a~~~~~~~- 179 (213)
T 3d54_D 114 ----WVDLIVENND-TPFTNAFEKGEKIRIPIAHGFGRYVKID--------DVNVVLRYVKDVNGSDERIAGVLNESGN- 179 (213)
T ss_dssp ----EEEEEECCCS-STTSTTSCTTCEEEEECCBSSCEEECSS--------CCEEEEEESSCSSCCGGGEEEEECSSSC-
T ss_pred ----eEEEEeCCCC-CceeeccCCCCEEEEEeecCceEEEecC--------CCcEEEEEcCCCCCCccceeEEEcCCCC-
Confidence 4556665 34 3333333322234342345 888753 47888899866 6 459999987666
Q ss_pred EEEEcccCCCcCCC----CCchHHHHHHHHHHh
Q 007496 519 FIGVQFHPEYKSRP----GKPSPLFLGLIAAAC 547 (601)
Q Consensus 519 fvGVQFHPE~ss~p----~~p~pLF~~Fv~aa~ 547 (601)
++|+|||||++... .+...||++|++++.
T Consensus 180 ~~gvQfHPE~~~~~~~~~~~g~~l~~~f~~~~~ 212 (213)
T 3d54_D 180 VFGLMPHPERAVEELIGGEDGKKVFQSILNYLK 212 (213)
T ss_dssp EEEECSCSTTTTSTTTTCSTTSHHHHHHHHHCC
T ss_pred EEEEeCCHHHhcCHhhhcCccHHHHHHHHHHhh
Confidence 67999999999842 457899999998763
No 24
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=99.86 E-value=3.5e-22 Score=220.36 Aligned_cols=180 Identities=18% Similarity=0.166 Sum_probs=125.0
Q ss_pred EEEEcccCCCcchHH-HHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhcc--CCCEEEECCCCCCCc
Q 007496 300 IAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK--GADGILVPGGFGNRG 376 (601)
Q Consensus 300 IalVGkY~~l~DaY~-SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~--~~DGIlvpGGfG~rg 376 (601)
|+|+ +|+. .|. ++.++|+.+|+.+.+ .+.+.+ + +.+. ++||||+||||++..
T Consensus 2 i~il-D~g~---~~~~~i~r~l~~~G~~~~i----~p~~~~----------~-------~~i~~~~~dgiIlsGGp~s~~ 56 (503)
T 2ywb_A 2 VLVL-DFGS---QYTRLIARRLRELRAFSLI----LPGDAP----------L-------EEVLKHRPQALILSGGPRSVF 56 (503)
T ss_dssp EEEE-ESSC---TTHHHHHHHHHTTTCCEEE----EETTCC----------H-------HHHHTTCCSEEEECCCSSCSS
T ss_pred EEEE-ECCC---cHHHHHHHHHHHCCCEEEE----EECCCC----------H-------HHHHhcCCCEEEECCCCchhc
Confidence 8899 4773 454 899999999987643 232221 0 1222 569999999998753
Q ss_pred hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCCcccCCCceeeCceeEEE
Q 007496 377 VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYF 456 (601)
Q Consensus 377 ~eg~i~aik~are~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~v~l 456 (601)
.+......+.+.+.++|+||||+|||+|+.++|++|.... . .+.| .+.+.+
T Consensus 57 ~~~~~~~~~~~~~~~~PvLGIC~G~Qlla~~~GG~v~~~~---~--------------------~e~G------~~~v~~ 107 (503)
T 2ywb_A 57 DPDAPRPDPRLFSSGLPLLGICYGMQLLAQELGGRVERAG---R--------------------AEYG------KALLTR 107 (503)
T ss_dssp CTTCCCCCGGGGCSSCCEEEETHHHHHHHHTTTCEEECC--------------------------CEE------EEECSE
T ss_pred cCCCcchHHHHHhCCCCEEEECHHHHHHHHHhCCeEeeCC---C--------------------Cccc------eEEEEe
Confidence 3221122345567899999999999999999999986431 1 1223 333434
Q ss_pred ccCCchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEECCCCcEEEEcccCCCcCCCCCch
Q 007496 457 QIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPS 536 (601)
Q Consensus 457 ~~~~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffvGVQFHPE~ss~p~~p~ 536 (601)
.+ +.++..+- .... .++.|+|.|. .+ +.|++++|+++++. +++++++++| ++|+|||||++..|. +.
T Consensus 108 ~~-~~l~~~~~-~~~~--v~~~H~~~v~-----~l-p~g~~v~A~s~~~~-i~ai~~~~~~-~~gvQFHPE~~~~~~-g~ 174 (503)
T 2ywb_A 108 HE-GPLFRGLE-GEVQ--VWMSHQDAVT-----AP-PPGWRVVAETEENP-VAAIASPDGR-AYGVQFHPEVAHTPK-GM 174 (503)
T ss_dssp EC-SGGGTTCC-SCCE--EEEECSCEEE-----EC-CTTCEEEEECSSCS-CSEEECTTSS-EEEESBCTTSTTSTT-HH
T ss_pred cC-cHHhhcCC-CccE--EEEECCCccc-----cC-CCCCEEEEEECCCC-EEEEEeCCCC-EEEEecCCCcccccc-cH
Confidence 33 34454442 2333 3567888874 23 78999999998876 9999998888 559999999998875 88
Q ss_pred HHHHHHHHHH
Q 007496 537 PLFLGLIAAA 546 (601)
Q Consensus 537 pLF~~Fv~aa 546 (601)
.+|.+|++.|
T Consensus 175 ~ll~~F~~~~ 184 (503)
T 2ywb_A 175 QILENFLELA 184 (503)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999999654
No 25
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=99.85 E-value=1.3e-21 Score=189.81 Aligned_cols=184 Identities=21% Similarity=0.242 Sum_probs=116.5
Q ss_pred eEEEEEcccCCCcchHHHHHHHHHHcc-----ccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCC
Q 007496 298 VRIAMVGKYTGLSDAYLSILKALLHAS-----VDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF 372 (601)
Q Consensus 298 v~IalVGkY~~l~DaY~SIi~aL~~ag-----~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGf 372 (601)
|+|+|+ +|+.. +|.|+.++|+.+| +++.+ +... +. .++||||||||
T Consensus 1 m~I~ii-d~~~g--~~~s~~~~l~~~G~~~~~~~~~~------~~~~------------------~~-~~~dglilpG~- 51 (201)
T 1gpw_B 1 MRIGII-SVGPG--NIMNLYRGVKRASENFEDVSIEL------VESP------------------RN-DLYDLLFIPGV- 51 (201)
T ss_dssp CEEEEE-CCSSS--CCHHHHHHHHHHSTTBSSCEEEE------ECSC------------------CS-SCCSEEEECCC-
T ss_pred CEEEEE-ecCCc--hHHHHHHHHHHcCCCCCceEEEE------ECCC------------------cc-cCCCEEEECCC-
Confidence 589999 58732 6788999999998 54322 2221 12 57899999884
Q ss_pred CCCchh-------HHHHHHHHHHHcCCCEEEEehhHHHHHHHhc--cccccccCCCCCccCCCCCCCeeeeCCCCCcccC
Q 007496 373 GNRGVQ-------GKILAAKYAREHRIPYLGICLGMQVAVIEFA--RSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHM 443 (601)
Q Consensus 373 G~rg~e-------g~i~aik~are~~iP~LGICLGmQllaiefg--rnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~ 443 (601)
|+++.. +.+..++.+.+.++|+||||+|||+|+.+++ ++.-++. .+ ... +..++....+|+
T Consensus 52 g~~~~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~~g~~G~~~~l~-----~~----~g~-v~~~~~~~~~~~ 121 (201)
T 1gpw_B 52 GHFGEGMRRLRENDLIDFVRKHVEDERYVVGVCLGMQLLFEESEEAPGVKGLS-----LI----EGN-VVKLRSRRLPHM 121 (201)
T ss_dssp SCSHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHTTSSEETTEEEEECCC-----SS----SEE-EEECCCSSCSEE
T ss_pred CcHHHHHHHHHhhCHHHHHHHHHHcCCeEEEEChhHHHHHHhhccCCCCCCcc-----ee----eeE-EEEcCCCCCCcc
Confidence 665421 3567888888899999999999999998875 3221110 00 011 111111012333
Q ss_pred CCceeeCceeEEEccCCchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCC-CCeEEEEEECCCCcEEEE
Q 007496 444 GGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDET-SQRMEIVELPNHPYFIGV 522 (601)
Q Consensus 444 GgtmrLG~~~v~l~~~~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~d-g~~vE~IE~~~hpffvGV 522 (601)
|| +++..... + ......+.|+|.|.+. +++++|++++ |..+++++.++ + ++|+
T Consensus 122 g~------~~l~~~~~-~---------~~~~v~~~H~~~v~~~--------~~~vla~s~~~g~~~~a~~~~~-~-i~gv 175 (201)
T 1gpw_B 122 GW------NEVIFKDT-F---------PNGYYYFVHTYRAVCE--------EEHVLGTTEYDGEIFPSAVRKG-R-ILGF 175 (201)
T ss_dssp EE------EEEEESSS-S---------CCEEEEEEESEEEEEC--------GGGEEEEEEETTEEEEEEEEET-T-EEEE
T ss_pred cc------eeeEeccC-C---------CCCeEEEECcceeccC--------CCEEEEEEccCCceEEEEEECC-C-EEEE
Confidence 33 33333221 0 1123456688887532 4568888876 64589999876 5 6799
Q ss_pred cccCCCcCCCCCchHHHHHHHHHHhc
Q 007496 523 QFHPEYKSRPGKPSPLFLGLIAAACG 548 (601)
Q Consensus 523 QFHPE~ss~p~~p~pLF~~Fv~aa~~ 548 (601)
|||||++ +.....+|++|++++..
T Consensus 176 QfHPE~~--~~~~~~l~~~f~~~~~~ 199 (201)
T 1gpw_B 176 QFHPEKS--SKIGRKLLEKVIECSLS 199 (201)
T ss_dssp SSCGGGS--HHHHHHHHHHHHHHSSC
T ss_pred ECCCccc--CHhHHHHHHHHHHHhhc
Confidence 9999998 33456899999988754
No 26
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=99.85 E-value=2.3e-20 Score=186.31 Aligned_cols=184 Identities=17% Similarity=0.169 Sum_probs=126.4
Q ss_pred eEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCCc-
Q 007496 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG- 376 (601)
Q Consensus 298 v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~rg- 376 (601)
|||+++ ..... +....+.+.|+..|+++.+ ..+...+-.+ +.+.++||||||||++++.
T Consensus 1 m~i~vi-~h~~~-e~~g~~~~~l~~~g~~~~~----~~~~~~~~~p--------------~~~~~~d~lii~GGp~~~~~ 60 (236)
T 3l7n_A 1 MRIHFI-LHETF-EAPGAYLAWAALRGHDVSM----TKVYRYEKLP--------------KDIDDFDMLILMGGPQSPSS 60 (236)
T ss_dssp CEEEEE-ECCTT-SCCHHHHHHHHHTTCEEEE----EEGGGTCCCC--------------SCGGGCSEEEECCCSSCTTC
T ss_pred CeEEEE-eCCCC-CCchHHHHHHHHCCCeEEE----EeeeCCCCCC--------------CCccccCEEEECCCCCCccc
Confidence 578888 34433 2556778888888877543 3333222111 2356899999999998842
Q ss_pred -------h--hHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCCcccCCCce
Q 007496 377 -------V--QGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTM 447 (601)
Q Consensus 377 -------~--eg~i~aik~are~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~Ggtm 447 (601)
. ...+.+++.+.+.++|+||||+|||+|+.++|++|...+ ..++
T Consensus 61 ~~~~~~~~~~~~~~~~i~~~~~~~~PvLGIClG~QlL~~~~Gg~v~~~~-----------------------~~~~---- 113 (236)
T 3l7n_A 61 TKKEFPYYDAQAEVKLIQKAAKSEKIIVGVCLGAQLMGVAYGADYLHSP-----------------------KKEI---- 113 (236)
T ss_dssp CTTTCTTCCHHHHHHHHHHHHHTTCEEEEETHHHHHHHHHTTCCCEEEE-----------------------EEEE----
T ss_pred ccccCcccchHHHHHHHHHHHHcCCCEEEEchHHHHHHHHhCCEEecCC-----------------------Ccee----
Confidence 1 236788999999999999999999999999998885421 0123
Q ss_pred eeCceeEEEccC---CchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEECCCCcEEEEcc
Q 007496 448 RLGSRRTYFQIK---DCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQF 524 (601)
Q Consensus 448 rLG~~~v~l~~~---~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffvGVQF 524 (601)
|.+++.+.+. ++++..+. .. ....|.|++.. .+ +.++++++.++++. +++++..+ + ++|+||
T Consensus 114 --G~~~v~~~~~~~~~~l~~~~~-~~--~~v~~~H~~~~------~l-p~~~~vla~s~~~~-~~a~~~~~-~-v~gvQf 178 (236)
T 3l7n_A 114 --GNYLISLTEAGKMDSYLSDFS-DD--LLVGHWHGDMP------GL-PDKAQVLAISQGCP-RQIIKFGP-K-QYAFQC 178 (236)
T ss_dssp --EEEEEEECTTGGGCGGGTTSC-SE--EEEEEEEEEEC------CC-CTTCEEEEECSSCS-CSEEEEET-T-EEEESS
T ss_pred --eeEEEEEccCcccChHHhcCC-CC--cEEEEecCCcc------cC-CChheEEEECCCCC-EEEEEECC-C-EEEEEe
Confidence 3456766542 23343332 22 33456677542 23 67899999998886 88999875 4 679999
Q ss_pred cCCCcCCCCCchHHHHHHHHHHhcc
Q 007496 525 HPEYKSRPGKPSPLFLGLIAAACGQ 549 (601)
Q Consensus 525 HPE~ss~p~~p~pLF~~Fv~aa~~~ 549 (601)
|||++ ..++.+|++.....
T Consensus 179 HPE~~------~~~~~~~~~~~~~~ 197 (236)
T 3l7n_A 179 HLEFT------PELVAALIAQEDDL 197 (236)
T ss_dssp BSSCC------HHHHHHHHHHCSCH
T ss_pred CCCCC------HHHHHHHHHhhhhh
Confidence 99996 46889998887654
No 27
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=99.83 E-value=7.6e-20 Score=185.07 Aligned_cols=185 Identities=15% Similarity=0.176 Sum_probs=125.1
Q ss_pred eEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCC--
Q 007496 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR-- 375 (601)
Q Consensus 298 v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~r-- 375 (601)
.+|.++- ..... ...++.++|+..|+++.+ ..+...+.. | ..+.++||||||||++++
T Consensus 4 ~~vliiq-h~~~e-~~~~i~~~l~~~G~~v~v----~~~~~~~~~-------p-------~~~~~~d~lIl~GGp~~~~d 63 (250)
T 3m3p_A 4 KPVMIIQ-FSASE-GPGHFGDFLAGEHIPFQV----LRMDRSDPL-------P-------AEIRDCSGLAMMGGPMSAND 63 (250)
T ss_dssp CCEEEEE-SSSSC-CCHHHHHHHHHTTCCEEE----EEGGGTCCC-------C-------SCGGGSSEEEECCCSSCTTS
T ss_pred CeEEEEE-CCCCC-CHHHHHHHHHHCCCeEEE----EeccCCCcC-------c-------CccccCCEEEECCCCCcccc
Confidence 4677773 33222 446788999999987544 233222111 1 235789999999998763
Q ss_pred ---chhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCCcccCCCceeeCce
Q 007496 376 ---GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSR 452 (601)
Q Consensus 376 ---g~eg~i~aik~are~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~ 452 (601)
.....+..++.+.+.++|+||||+|||+|+.++|++|...+ .+++|| .
T Consensus 64 ~~~~~~~~~~~i~~~~~~~~PvlGIC~G~Qll~~~lGG~V~~~~-----------------------~~e~G~------~ 114 (250)
T 3m3p_A 64 DLPWMPTLLALIRDAVAQRVPVIGHCLGGQLLAKAMGGEVTDSP-----------------------HAEIGW------V 114 (250)
T ss_dssp CCTTHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEEEE-----------------------EEEEEE------E
T ss_pred cchHHHHHHHHHHHHHHcCCCEEEECHHHHHHHHHhCCEEEeCC-----------------------CCceee------E
Confidence 23456778888888999999999999999999999986532 023343 5
Q ss_pred eEEEccCCchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEECCCCcEEEEcccCCCcCCC
Q 007496 453 RTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRP 532 (601)
Q Consensus 453 ~v~l~~~~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffvGVQFHPE~ss~p 532 (601)
++.+.+. +....+++-...+...|.|+|.|. + +.|++++|.++++. +++++..++ ++|+|||||++
T Consensus 115 ~v~~~~~-~~~~~l~g~~~~~~v~~~H~~~v~------l-p~~~~vlA~s~~~~-~~a~~~~~~--~~GvQfHPE~~--- 180 (250)
T 3m3p_A 115 RAWPQHV-PQALEWLGTWDELELFEWHYQTFS------I-PPGAVHILRSEHCA-NQAYVLDDL--HIGFQCHIEMQ--- 180 (250)
T ss_dssp EEEECSS-HHHHHHHSCSSCEEEEEEEEEEEC------C-CTTEEEEEEETTEE-EEEEEETTT--EEEESSCTTCC---
T ss_pred EEEEecC-CCCcccccCCCccEEEEEccceee------c-CCCCEEEEEeCCCC-EEEEEECCe--eEEEEeCCcCC---
Confidence 5666543 222233321223456788888872 2 67999999999875 999999874 67999999986
Q ss_pred CCchHHHHHHHHHHhc
Q 007496 533 GKPSPLFLGLIAAACG 548 (601)
Q Consensus 533 ~~p~pLF~~Fv~aa~~ 548 (601)
......+++....
T Consensus 181 ---~~~~~~~l~~~~~ 193 (250)
T 3m3p_A 181 ---AHMVREWCSISPE 193 (250)
T ss_dssp ---HHHHHHHHHHCGG
T ss_pred ---HHHHHHHHHhhHH
Confidence 2455666655443
No 28
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=99.82 E-value=3.7e-20 Score=182.71 Aligned_cols=185 Identities=15% Similarity=0.199 Sum_probs=117.2
Q ss_pred CceEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCC
Q 007496 296 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 375 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~r 375 (601)
..++|+|++ + .++|.+++++|+.+|+++. +++.. +.+.++|||+||||++..
T Consensus 22 ~~~~I~il~-~---~~~~~~~~~~l~~~G~~~~------~~~~~------------------~~l~~~Dglil~GG~~~~ 73 (219)
T 1q7r_A 22 SNMKIGVLG-L---QGAVREHVRAIEACGAEAV------IVKKS------------------EQLEGLDGLVLPGGESTT 73 (219)
T ss_dssp CCCEEEEES-C---GGGCHHHHHHHHHTTCEEE------EECSG------------------GGGTTCSEEEECCCCHHH
T ss_pred CCCEEEEEe-C---CCCcHHHHHHHHHCCCEEE------EECCH------------------HHHhhCCEEEECCCChHH
Confidence 468999995 4 3467788899999987542 23321 236789999999998643
Q ss_pred c-----hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCCcccCCCceeeC
Q 007496 376 G-----VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLG 450 (601)
Q Consensus 376 g-----~eg~i~aik~are~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG 450 (601)
. .....++++.+.+.++|+||||+|||+|+.++++++.. + .+. .|....+ ...|. +.+
T Consensus 74 ~~~~~~~~~~~~~i~~~~~~~~PilGIC~G~QlL~~~~gg~~~~--~-----lg~---~~~~~~~-----~~~g~--~~~ 136 (219)
T 1q7r_A 74 MRRLIDRYGLMEPLKQFAAAGKPMFGTCAGLILLAKRIVGYDEP--H-----LGL---MDITVER-----NSFGR--QRE 136 (219)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCEEEETTHHHHHEEEEESSCCC--C-----CCC---EEEEEEC-----HHHHC--CCC
T ss_pred HHHHhhhhHHHHHHHHHHHcCCeEEEECHHHHHHHHHhCCCCcC--C-----cCc---cceEEEe-----cCCCc--ccc
Confidence 2 13446788999999999999999999999888876521 1 100 0000000 00111 011
Q ss_pred ceeEEEccCCchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEECCCCcEEEEcccCCCcC
Q 007496 451 SRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKS 530 (601)
Q Consensus 451 ~~~v~l~~~~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffvGVQFHPE~ss 530 (601)
.+... ..+.. ++ .++...+.|++.|. .+ +.++++++.+ |+. +|+++. ++++|+|||||+++
T Consensus 137 ~~~~~-----~~~~g-~g--~~~~~~~~h~~~v~-----~l-~~~~~v~a~s-dg~-~ea~~~---~~i~GvQfHPE~~~ 197 (219)
T 1q7r_A 137 SFEAE-----LSIKG-VG--DGFVGVFIRAPHIV-----EA-GDGVDVLATY-NDR-IVAARQ---GQFLGCSFHPELTD 197 (219)
T ss_dssp CEEEE-----EEETT-TE--EEEEEEESSCCEEE-----EE-CTTCEEEEEE-TTE-EEEEEE---TTEEEESSCGGGSS
T ss_pred ceecC-----cccCC-CC--CceEEEEEecceee-----cc-CCCcEEEEEc-CCE-EEEEEE---CCEEEEEECcccCC
Confidence 11110 11111 11 12333445666553 23 5789999998 664 899987 35789999999975
Q ss_pred CCCCchHHHHHHHHHHhc
Q 007496 531 RPGKPSPLFLGLIAAACG 548 (601)
Q Consensus 531 ~p~~p~pLF~~Fv~aa~~ 548 (601)
. ..+|++|++++.+
T Consensus 198 ~----~~l~~~fl~~~~~ 211 (219)
T 1q7r_A 198 D----HRLMQYFLNMVKE 211 (219)
T ss_dssp C----CHHHHHHHHHHHH
T ss_pred C----HHHHHHHHHHHHH
Confidence 4 3899999998865
No 29
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.82 E-value=7.1e-20 Score=175.57 Aligned_cols=181 Identities=16% Similarity=0.197 Sum_probs=114.1
Q ss_pred eEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCC-c
Q 007496 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR-G 376 (601)
Q Consensus 298 v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~r-g 376 (601)
++|+|+. + .+++.++.++|+.+|+++.+ ++.. +.+.++|||++|||++.. .
T Consensus 3 p~Igi~~-~---~~~~~~~~~~l~~~G~~~~~------~~~~------------------~~l~~~dglil~GG~~~~~~ 54 (191)
T 2ywd_A 3 GVVGVLA-L---QGDFREHKEALKRLGIEAKE------VRKK------------------EHLEGLKALIVPGGESTTIG 54 (191)
T ss_dssp CCEEEEC-S---SSCHHHHHHHHHTTTCCCEE------ECSG------------------GGGTTCSEEEECSSCHHHHH
T ss_pred cEEEEEe-c---CCchHHHHHHHHHCCCEEEE------eCCh------------------hhhccCCEEEECCCChhhhH
Confidence 5799995 3 34788999999999987543 2211 235679999999996431 1
Q ss_pred ----hhHHHHHHHHHHHcC-CCEEEEehhHHHHHHHhcc-ccccccCCCCCccCCCCCCCeeeeCCCCCcccCCCceeeC
Q 007496 377 ----VQGKILAAKYAREHR-IPYLGICLGMQVAVIEFAR-SVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLG 450 (601)
Q Consensus 377 ----~eg~i~aik~are~~-iP~LGICLGmQllaiefgr-nV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG 450 (601)
.....+.++.+.+.+ +|+||||+|||+|+.++++ ++.. + .+. .+.-..+ ...|.+ ..
T Consensus 55 ~~~~~~~~~~~i~~~~~~~~~PilGiC~G~Q~l~~~~gg~~~~~--~-----lg~---~~~~~~~-----~~~g~~--~~ 117 (191)
T 2ywd_A 55 KLAREYGIEDEVRKRVEEGSLALFGTCAGAIWLAKEIVGYPEQP--R-----LGV---LEAWVER-----NAFGRQ--VE 117 (191)
T ss_dssp HHHHHTTHHHHHHHHHHTTCCEEEEETHHHHHHEEEETTCTTCC--C-----CCC---EEEEEET-----TCSCCS--SS
T ss_pred HhhhhhhHHHHHHHHHHCCCCeEEEECHHHHHHHHHhCCCCCCc--c-----ccc---cceEEEc-----CCcCCc--cc
Confidence 134567888888889 9999999999999988886 4321 1 000 0000000 001110 11
Q ss_pred ceeEEEccCCchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEECCCCcEEEEcccCCCcC
Q 007496 451 SRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKS 530 (601)
Q Consensus 451 ~~~v~l~~~~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffvGVQFHPE~ss 530 (601)
.+... ..+..+ ..+...+.|+|.+. .+ +.++++++++ ++ .+|+++..+ ++|+|||||+++
T Consensus 118 ~~~~~-----~~~~~~----~~~~~~~~Hs~~v~-----~l-~~~~~~~a~~-~~-~~~a~~~~~---~~gvQfHPE~~~ 177 (191)
T 2ywd_A 118 SFEED-----LEVEGL----GSFHGVFIRAPVFR-----RL-GEGVEVLARL-GD-LPVLVRQGK---VLASSFHPELTE 177 (191)
T ss_dssp EEEEE-----EEETTT----EEEEEEEESCCEEE-----EE-CTTCEEEEEE-TT-EEEEEEETT---EEEESSCGGGSS
T ss_pred ccccc-----ccccCC----CceeEEEEccccee-----cc-CCCcEEEEEE-CC-EEEEEEECC---EEEEEeCCCCCC
Confidence 11100 111111 12334456777663 12 5678899998 54 599999753 779999999875
Q ss_pred CCCCchHHHHHHHHHHh
Q 007496 531 RPGKPSPLFLGLIAAAC 547 (601)
Q Consensus 531 ~p~~p~pLF~~Fv~aa~ 547 (601)
. + .+|++|+++|.
T Consensus 178 ~---~-~l~~~f~~~~~ 190 (191)
T 2ywd_A 178 D---P-RLHRYFLELAG 190 (191)
T ss_dssp C---C-HHHHHHHHHHT
T ss_pred C---c-HHHHHHHHHhc
Confidence 3 3 89999998863
No 30
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=99.81 E-value=1.6e-20 Score=214.10 Aligned_cols=180 Identities=16% Similarity=0.142 Sum_probs=118.7
Q ss_pred eEEEEEcccCCCcchHH-HHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCCCC
Q 007496 298 VRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGN 374 (601)
Q Consensus 298 v~IalVGkY~~l~DaY~-SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGfG~ 374 (601)
.+|++++ |+. .|. .+.++|+.+|+.+.+ .+.+.. . +.+ .++|||||||||++
T Consensus 30 ~~I~VLD-fg~---q~~~liar~lre~Gv~~~i----vp~~~~-~----------------e~i~~~~~dGIILsGGp~s 84 (697)
T 2vxo_A 30 GAVVILD-AGA---QYGKVIDRRVRELFVQSEI----FPLETP-A----------------FAIKEQGFRAIIISGGPNS 84 (697)
T ss_dssp CCEEEEE-EC-----CHHHHHHHHHHTTCCEEE----EETTCC-H----------------HHHHHHTCSEEEEEECC--
T ss_pred CEEEEEE-CCC---chHHHHHHHHHHCCCEEEE----EECCCC-H----------------HHHhhcCCCEEEECCCCCc
Confidence 4799995 663 443 477999999987643 232221 0 112 58999999999987
Q ss_pred CchhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCCcccCCCceeeCceeE
Q 007496 375 RGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRT 454 (601)
Q Consensus 375 rg~eg~i~aik~are~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~v 454 (601)
...++.....+.+.+.++|+||||+|||+|+.++|++|.+++ . .+.| .+++
T Consensus 85 ~~~~~~~~~~~~i~~~g~PvLGIC~G~QlLa~~lGG~v~~~~---~--------------------~e~G------~~~v 135 (697)
T 2vxo_A 85 VYAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHKKS---V--------------------REDG------VFNI 135 (697)
T ss_dssp -----CCCCCGGGTTSSCCEEEEEHHHHHHHHHTTCCBCC------------------------------------CEEE
T ss_pred ccCccchhHHHHHHhCCCCEEEECHHHHHHHHHhCCeEeecC---C--------------------Cccc------eEEE
Confidence 532111111233456789999999999999999999986532 1 1233 4566
Q ss_pred EEccCCchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEECCCCcEEEEcccCCCcCCCCC
Q 007496 455 YFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGK 534 (601)
Q Consensus 455 ~l~~~~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffvGVQFHPE~ss~p~~ 534 (601)
.+.+++.++..+ +.... ..+.|+|.|. .+ ++|++++|.++ + .+++++++++|+ +|+|||||+...|.
T Consensus 136 ~~~~~~~Lf~~l-~~~~~--v~~~H~~~V~-----~l-p~g~~vlA~s~-~-~i~ai~~~~~~i-~GvQFHPE~~~t~~- 202 (697)
T 2vxo_A 136 SVDNTCSLFRGL-QKEEV--VLLTHGDSVD-----KV-ADGFKVVARSG-N-IVAGIANESKKL-YGAQFHPEVGLTEN- 202 (697)
T ss_dssp EECTTSGGGTTC-CSEEE--ECCCSSCCBS-----SC-CTTCEEEEEET-T-EEEEEEETTTTE-EEESSCTTSSSSTT-
T ss_pred EecCCChhhhcC-CccCc--ceeeccccee-----cC-CCCeEEEEEeC-C-ceEEEEeCCCCE-EEEEecccCCCCcc-
Confidence 666553444433 32333 4566888874 34 67999999984 4 699999999884 59999999998885
Q ss_pred chHHHHHHHH
Q 007496 535 PSPLFLGLIA 544 (601)
Q Consensus 535 p~pLF~~Fv~ 544 (601)
+..+|++|+.
T Consensus 203 g~~ll~nFl~ 212 (697)
T 2vxo_A 203 GKVILKNFLY 212 (697)
T ss_dssp HHHHHHHHHT
T ss_pred chhhhhhhhh
Confidence 7899999993
No 31
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=99.81 E-value=7e-20 Score=176.95 Aligned_cols=185 Identities=15% Similarity=0.183 Sum_probs=114.9
Q ss_pred eEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCCc-
Q 007496 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG- 376 (601)
Q Consensus 298 v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~rg- 376 (601)
+||+|++ | .++|.+++++|+.+|+++. +++.. +.+.++|||++|||++...
T Consensus 2 m~I~il~-~---~~~~~~~~~~l~~~g~~~~------~~~~~------------------~~l~~~d~iil~GG~~~~~~ 53 (196)
T 2nv0_A 2 LTIGVLG-L---QGAVREHIHAIEACGAAGL------VVKRP------------------EQLNEVDGLILPGGESTTMR 53 (196)
T ss_dssp CEEEEEC-S---SSCCHHHHHHHHHTTCEEE------EECSG------------------GGGGGCSEEEECCSCHHHHH
T ss_pred cEEEEEE-c---cCCcHHHHHHHHHCCCEEE------EeCCh------------------HHHhhCCEEEECCCChhhHH
Confidence 6899995 4 3578888899999987532 23321 2356899999999986532
Q ss_pred ----hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCCcccCCCceeeCce
Q 007496 377 ----VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSR 452 (601)
Q Consensus 377 ----~eg~i~aik~are~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~ 452 (601)
..+..+.++.+.++++|+||||+|||+|+.++++++.. +.+. .|....+. ..|.. .+.
T Consensus 54 ~~~~~~~~~~~i~~~~~~~~pilgIC~G~q~l~~~~gg~~~~-------~lg~---~~~~~~~~-----~~g~~--~~~- 115 (196)
T 2nv0_A 54 RLIDTYQFMEPLREFAAQGKPMFGTCAGLIILAKEIAGSDNP-------HLGL---LNVVVERN-----SFGRQ--VDS- 115 (196)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHSBCCC----C-------CCCC---SCEEEECC-----CSCTT--TSE-
T ss_pred HHhhhHHHHHHHHHHHHCCCcEEEECHHHHHHHHHhcCCCCC-------cccC---CceeEecc-----CCCcc--ccc-
Confidence 12346788888899999999999999999888876521 1110 01110000 01111 000
Q ss_pred eEEEccCCchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEECCCCcEEEEcccCCCcCCC
Q 007496 453 RTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRP 532 (601)
Q Consensus 453 ~v~l~~~~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffvGVQFHPE~ss~p 532 (601)
+..+ +.+.. ++. ++...+.|++.+. .+ +.++++++.+ |+. +|+++.. +++|+|||||+++.
T Consensus 116 ---~~~~-~~~~~-~g~--~~~~~~~h~~~v~-----~~-~~~~~v~a~~-d~~-~~a~~~~---~~~gvQfHPE~~~~- 176 (196)
T 2nv0_A 116 ---FEAD-LTIKG-LDE--PFTGVFIRAPHIL-----EA-GENVEVLSEH-NGR-IVAAKQG---QFLGCSFHPELTED- 176 (196)
T ss_dssp ---EEEE-ECCTT-CSS--CEEEEEESCCEEE-----EE-CTTCEEEEEE-TTE-EEEEEET---TEEEESSCTTSSSC-
T ss_pred ---ccCC-ccccc-CCC--ceEEEEEecceec-----cc-CCCcEEEEEE-CCE-EEEEEEC---CEEEEEECCccCCc-
Confidence 1111 22333 232 2223445666553 22 5688999988 554 7898863 57899999999765
Q ss_pred CCchHHHHHHHHHHhcch
Q 007496 533 GKPSPLFLGLIAAACGQL 550 (601)
Q Consensus 533 ~~p~pLF~~Fv~aa~~~~ 550 (601)
..+|++|++++.+..
T Consensus 177 ---~~l~~~fl~~~~~~~ 191 (196)
T 2nv0_A 177 ---HRVTQLFVEMVEEYK 191 (196)
T ss_dssp ---CHHHHHHHHHHHHHH
T ss_pred ---hHHHHHHHHHHHhhh
Confidence 289999999886533
No 32
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=99.80 E-value=7.2e-20 Score=177.76 Aligned_cols=184 Identities=24% Similarity=0.287 Sum_probs=114.4
Q ss_pred eEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCCch
Q 007496 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 377 (601)
Q Consensus 298 v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~rg~ 377 (601)
++|+|+ +|+. .++.|+.++|+.+|+++.+ ++.. +.+.++|||++|| +|++..
T Consensus 3 ~~I~ii-d~~~--~~~~~~~~~l~~~G~~~~~------~~~~------------------~~l~~~d~lil~G-~g~~~~ 54 (200)
T 1ka9_H 3 MKALLI-DYGS--GNLRSAAKALEAAGFSVAV------AQDP------------------KAHEEADLLVLPG-QGHFGQ 54 (200)
T ss_dssp CEEEEE-CSSC--SCHHHHHHHHHHTTCEEEE------ESST------------------TSCSSCSEEEECC-CSCHHH
T ss_pred cEEEEE-eCCC--ccHHHHHHHHHHCCCeEEE------ecCh------------------HHcccCCEEEECC-CCcHHH
Confidence 689999 5752 3788999999999976533 2221 2356899999977 354321
Q ss_pred -------hHHHHHHHHHHHcCCCEEEEehhHHHHHHH---hccccccccCCCCCccCCCCCCCeeeeCCCCCcccCCCce
Q 007496 378 -------QGKILAAKYAREHRIPYLGICLGMQVAVIE---FARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTM 447 (601)
Q Consensus 378 -------eg~i~aik~are~~iP~LGICLGmQllaie---fgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~Ggtm 447 (601)
....+.++.+.+.++|+||||+|||+|+.+ +|+ . ++.. .+ +..+ ..++....+|+|
T Consensus 55 ~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~~~~~Gg-~---~~l~--~~----~g~v-~~~~~~~~~~~G--- 120 (200)
T 1ka9_H 55 VMRAFQESGFVERVRRHLERGLPFLGICVGMQVLYEGSEEAPG-V---RGLG--LV----PGEV-RRFRAGRVPQMG--- 120 (200)
T ss_dssp HHHTTSSSCTHHHHHHHHHTTCCEEECTHHHHTTSSEETTSTT-C---CCCC--SS----SSEE-EECCSSSSSEEE---
T ss_pred HHHHHHhcCHHHHHHHHHHcCCeEEEEcHHHHHHHHhccccCC-c---CCcc--cc----ccEE-EECCCCCCCcee---
Confidence 246788999889999999999999999877 443 1 1110 01 1111 111110123444
Q ss_pred eeCceeEEEccCCchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCC-CCeEEEEEECCCCcEEEEcccC
Q 007496 448 RLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDET-SQRMEIVELPNHPYFIGVQFHP 526 (601)
Q Consensus 448 rLG~~~v~l~~~~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~d-g~~vE~IE~~~hpffvGVQFHP 526 (601)
.+++.+.+ + +..+.+ . ...+.|+|.+ +. .++ .+ +++++ |..++++...+ +++|+||||
T Consensus 121 ---~~~v~~~~--~-l~~~~~--~--~~~~~Hs~~~-~~------~~~-~v-a~s~~~g~~~~~~~~~~--~i~gvQfHP 179 (200)
T 1ka9_H 121 ---WNALEFGG--A-FAPLTG--R--HFYFANSYYG-PL------TPY-SL-GKGEYEGTPFTALLAKE--NLLAPQFHP 179 (200)
T ss_dssp ---EEECEECG--G-GGGGTT--C--EEEEEESEEC-CC------CTT-CC-EEEEETTEEEEEEEECS--SEEEESSCT
T ss_pred ---EEEEEech--h-hhcCCC--C--CEEEeccccc-CC------CCC-cE-EEEEeCCeEEEEEEeeC--CEEEEecCC
Confidence 44566554 3 556643 2 2467789988 42 122 35 77776 63356665554 577999999
Q ss_pred CCcCCCCCchHHH---HHHHHHH
Q 007496 527 EYKSRPGKPSPLF---LGLIAAA 546 (601)
Q Consensus 527 E~ss~p~~p~pLF---~~Fv~aa 546 (601)
|++. .....+| ++|++.+
T Consensus 180 E~~~--~~g~~l~~~~~~F~~~~ 200 (200)
T 1ka9_H 180 EKSG--KAGLAFLALARRYFEVL 200 (200)
T ss_dssp TSSH--HHHHHHHHHHHHHC---
T ss_pred CcCc--cchhHHHHHHHHHHhhC
Confidence 9985 3456899 9998753
No 33
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=99.79 E-value=2.7e-19 Score=175.07 Aligned_cols=186 Identities=12% Similarity=0.135 Sum_probs=110.4
Q ss_pred CCCceEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCC
Q 007496 294 LHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFG 373 (601)
Q Consensus 294 ~~~~v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG 373 (601)
+.++++|+++ +| ..+|.++.++|+.+|+++. +++.. +.+.++|||++|||+.
T Consensus 17 ~~~~~~I~ii-~~---~~~~~~~~~~l~~~g~~~~------~~~~~------------------~~l~~~d~iil~GG~~ 68 (208)
T 2iss_D 17 RGSHMKIGVL-GV---QGDVREHVEALHKLGVETL------IVKLP------------------EQLDMVDGLILPGGES 68 (208)
T ss_dssp ---CCEEEEE-CS---SSCHHHHHHHHHHTTCEEE------EECSG------------------GGGGGCSEEEECSSCH
T ss_pred CCCCcEEEEE-EC---CCchHHHHHHHHHCCCEEE------EeCCh------------------HHHhhCCEEEECCCcH
Confidence 3456899999 57 2389999999999886532 23321 2356899999999853
Q ss_pred CCc-----hhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCCcccCCCcee
Q 007496 374 NRG-----VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMR 448 (601)
Q Consensus 374 ~rg-----~eg~i~aik~are~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~Ggtmr 448 (601)
... ..+..++++.+.+.++|+||||+|||+|+.++++... +. .+. -|....+ ...|...
T Consensus 69 ~~~~~~~~~~~~~~~i~~~~~~g~PilGIC~G~QlL~~~~gg~~~--~~-----lg~---~~~~v~~-----~~~g~~~- 132 (208)
T 2iss_D 69 TTMIRILKEMDMDEKLVERINNGLPVFATCAGVILLAKRIKNYSQ--EK-----LGV---LDITVER-----NAYGRQV- 132 (208)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHEEEEC---C--CC-----CCC---EEEEEET-----TTTCSGG-
T ss_pred HHHHhhhhhhhHHHHHHHHHHCCCeEEEECHHHHHHHHHcCCCCC--CC-----ccc---cceEEEe-----cCCCccc-
Confidence 211 1234678888888999999999999999988876431 11 100 0000000 0011110
Q ss_pred eCceeEEEccCCchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEECCCCcEEEEcccCCC
Q 007496 449 LGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEY 528 (601)
Q Consensus 449 LG~~~v~l~~~~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffvGVQFHPE~ 528 (601)
+. +..+ +.+..+ + ..++.....|++.+. .+ +.++++++.+ |+ .+|+++.. + ++|+|||||+
T Consensus 133 -~~----~~~~-~~~~~~-~-~~~~~~~~~h~~~v~-----~~-~~~~~v~a~~-d~-~~~a~~~~--~-i~GvQfHPE~ 193 (208)
T 2iss_D 133 -ES----FETF-VEIPAV-G-KDPFRAIFIRAPRIV-----ET-GKNVEILATY-DY-DPVLVKEG--N-ILACTFHPEL 193 (208)
T ss_dssp -GC----EEEE-ECCGGG-C-SSCEEEEESSCCEEE-----EE-CSSCEEEEEE-TT-EEEEEEET--T-EEEESSCGGG
T ss_pred -cc----ccCC-cccccC-C-CCceEEEEEeCcccc-----cC-CCCcEEEEEE-CC-EEEEEEEC--C-EEEEEeCCCc
Confidence 00 1111 223332 2 112222334554443 22 5678999987 55 48999863 3 7799999999
Q ss_pred cCCCCCchHHHHHHHHHH
Q 007496 529 KSRPGKPSPLFLGLIAAA 546 (601)
Q Consensus 529 ss~p~~p~pLF~~Fv~aa 546 (601)
++.+ .+|++|+++|
T Consensus 194 ~~~~----~l~~~fl~~~ 207 (208)
T 2iss_D 194 TDDL----RLHRYFLEMV 207 (208)
T ss_dssp SSCC----HHHHHHHTTC
T ss_pred CCcH----HHHHHHHHHh
Confidence 8653 8999998754
No 34
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=99.74 E-value=6.5e-18 Score=167.05 Aligned_cols=198 Identities=13% Similarity=0.147 Sum_probs=112.0
Q ss_pred ceEEEEEcccCCCcchHHHHHHHHHHc---cccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCC
Q 007496 297 PVRIAMVGKYTGLSDAYLSILKALLHA---SVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFG 373 (601)
Q Consensus 297 ~v~IalVGkY~~l~DaY~SIi~aL~~a---g~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG 373 (601)
+++|+|+. |. .++.+.+++|+.+ |+.+ .+++.. +.+.++|||+||||+.
T Consensus 3 ~~~I~Il~-~~---~~~~~~~~~l~~~~~~G~~~------~~~~~~------------------~~l~~~dglil~GG~~ 54 (227)
T 2abw_A 3 EITIGVLS-LQ---GDFEPHINHFIKLQIPSLNI------IQVRNV------------------HDLGLCDGLVIPGGES 54 (227)
T ss_dssp CEEEEEEC-TT---SCCHHHHHHHHTTCCTTEEE------EEECSH------------------HHHHTCSEEEECCSCH
T ss_pred CcEEEEEe-CC---CCcHHHHHHHHHhccCCeEE------EEEcCc------------------cccccCCEEEECCCcH
Confidence 48999995 54 2567889999998 7542 223221 3456899999999974
Q ss_pred CC-----ch--hHHHHHHHHHHHc-CCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCCcccCCC
Q 007496 374 NR-----GV--QGKILAAKYAREH-RIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGG 445 (601)
Q Consensus 374 ~r-----g~--eg~i~aik~are~-~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~Gg 445 (601)
+. .. .++...++.+.+. ++|+||||+|||+|+.++++.+..-+-....+++- .++...+. ..|.
T Consensus 55 ~~~~~~~~~d~~~~~~~i~~~~~~~g~PilGIC~G~QlL~~~~gg~~~~~~~~~~~~lG~---~~~~~~~~-----~~g~ 126 (227)
T 2abw_A 55 TTVRRCCAYENDTLYNALVHFIHVLKKPIWGTCAGCILLSKNVENIKLYSNFGNKFSFGG---LDITICRN-----FYGS 126 (227)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHTSCCCEEEETHHHHHTEEEEECCCSCCTTGGGSCCCC---EEEEEECC-----C---
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHHhcCCccccccccccccCc---eeEEEEec-----CCCc
Confidence 31 11 3567888888888 99999999999999988876541100000011110 00000000 0010
Q ss_pred c-eeeCceeEEEccCCchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeC-----CCCeEEEEEECCCCcE
Q 007496 446 T-MRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDE-----TSQRMEIVELPNHPYF 519 (601)
Q Consensus 446 t-mrLG~~~v~l~~~~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~-----dg~~vE~IE~~~hpff 519 (601)
. .++ ...+.+ ++ +..+.+.. ......|+|.|. .+.++++++++.++ ++. +++++.. ++
T Consensus 127 ~~~~~-~~~~~~-~~---~~~~~g~~--~~~~~~h~~~v~-----~~~~~~~~vla~~~~~~~g~~~-~~a~~~~---~v 190 (227)
T 2abw_A 127 QNDSF-ICSLNI-IS---DSSAFKKD--LTAACIRAPYIR-----EILSDEVKVLATFSHESYGPNI-IAAVEQN---NC 190 (227)
T ss_dssp -CCEE-EEECEE-CC---CCTTCCTT--CEEEEESCCEEE-----EECCTTCEEEEEEEETTTEEEE-EEEEEET---TE
T ss_pred ccccc-cccccc-cc---ccccCCCc--eeEEEEEcceEe-----ecCCCCcEEEEEcccccCCCCc-eEEEEEC---CE
Confidence 0 000 001111 11 00001111 111223444442 11146788989876 443 7888753 47
Q ss_pred EEEcccCCCcCCCCCchHHHHHHHHHHhcch
Q 007496 520 IGVQFHPEYKSRPGKPSPLFLGLIAAACGQL 550 (601)
Q Consensus 520 vGVQFHPE~ss~p~~p~pLF~~Fv~aa~~~~ 550 (601)
+|+|||||++..+ .+|++|+++|....
T Consensus 191 ~gvQfHPE~~~~~----~l~~~Fl~~~~~~~ 217 (227)
T 2abw_A 191 LGTVFHPELLPHT----AFQQYFYEKVKNYK 217 (227)
T ss_dssp EEESSCGGGSSCC----HHHHHHHHHHHHHH
T ss_pred EEEEECCeeCCCc----HHHHHHHHHHHhhh
Confidence 8999999998653 89999999986543
No 35
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.63 E-value=6.4e-17 Score=180.47 Aligned_cols=197 Identities=14% Similarity=0.132 Sum_probs=116.2
Q ss_pred eEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCCch
Q 007496 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 377 (601)
Q Consensus 298 v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~rg~ 377 (601)
.+|+|++ |.. ..+.++.++|+.+|+.+.+ ++..+ . ..+.++|||||||| |++..
T Consensus 5 ~~I~Iid-~~~--g~~~~~~~~l~~~G~~~~v------v~~~~--~--------------~~l~~~DglILpGg-G~~~~ 58 (555)
T 1jvn_A 5 PVVHVID-VES--GNLQSLTNAIEHLGYEVQL------VKSPK--D--------------FNISGTSRLILPGV-GNYGH 58 (555)
T ss_dssp CEEEEEC-CSC--SCCHHHHHHHHHTTCEEEE------ESSGG--G--------------CCSTTCSCEEEEEC-SCHHH
T ss_pred CEEEEEE-CCC--CCHHHHHHHHHHCCCEEEE------ECCcc--c--------------cccccCCEEEECCC-CchHh
Confidence 5899994 862 2556899999999876432 33210 0 12678999999883 44321
Q ss_pred -------hHHHHHHHHHHHcCCCEEEEehhHHHHHHHh--ccccccccCCCCCccCCCCCCCeeeeCCC--CCcccCCCc
Q 007496 378 -------QGKILAAKYAREHRIPYLGICLGMQVAVIEF--ARSVLNLRDANSTEFDPNTKNPCVIFMPE--GSKTHMGGT 446 (601)
Q Consensus 378 -------eg~i~aik~are~~iP~LGICLGmQllaief--grnV~gl~da~S~Ef~~~~~~pvi~~mpe--~~~~h~Ggt 446 (601)
.+...+++.+.+.++|+||||+|||+|+.++ ++..-+|. .+ ...+.. .+. ...+|+||
T Consensus 59 ~~~~l~~~~~~~~i~~~~~~g~PiLGIC~G~QlL~~a~~egg~~~~Lg-----~l----gg~v~~-~~~~~~~~~~~G~- 127 (555)
T 1jvn_A 59 FVDNLFNRGFEKPIREYIESGKPIMGIXVGLQALFAGSVESPKSTGLN-----YI----DFKLSR-FDDSEKPVPEIGW- 127 (555)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCEEEEEHHHHTTEEEETTBTTCCCCC-----SE----EEEEEE-CCTTTSCSSEEEE-
T ss_pred HhhhhhhccHHHHHHHHHHcCCcEEEEchhhhhhhhhhhcCCCccccC-----CC----CcEEEE-CCcCCCCCccccc-
Confidence 2356788888889999999999999998776 11111110 00 011111 111 12345555
Q ss_pred eeeCceeEEEccCCchhhhccCCceeEeeeeceeeeeChhhH-hhhccCCeEEEEEeCCC--CeEEEEEECCCCcEEEEc
Q 007496 447 MRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMI-ARLENAGLSFTGKDETS--QRMEIVELPNHPYFIGVQ 523 (601)
Q Consensus 447 mrLG~~~v~l~~~~s~l~~lyg~~~~I~erhrHrYeVn~~~v-~~le~~Gl~~~g~s~dg--~~vE~IE~~~hpffvGVQ 523 (601)
+++.+. ++++..+.. ... ..+.|+|.+..... ..+.+.++.++++++.+ ..+++++. . +++|+|
T Consensus 128 -----~~v~~~--~~L~~~l~~-~~~--~~~vHS~~~~~i~~~~~~L~~g~~vlA~s~~~~D~~i~ai~~--~-~i~GvQ 194 (555)
T 1jvn_A 128 -----NSCIPS--ENLFFGLDP-YKR--YYFVHSFAAILNSEKKKNLENDGWKIAKAKYGSEEFIAAVNK--N-NIFATQ 194 (555)
T ss_dssp -----ECCCCC--TTCCTTCCT-TSC--EEEEESEECBCCHHHHHHHHHTTCEEEEEEETTEEEEEEEEE--T-TEEEES
T ss_pred -----eEEEEc--CHHHhhCCC-Cce--EEEEEEEEEEecccccccCCCCCEEEEEEcCCCCCeEEEEEe--C-CEEEEE
Confidence 233332 244444432 212 34568888754210 00113466788877643 24899983 3 477999
Q ss_pred ccCCCcCCCCCchHHHHHHHHHH
Q 007496 524 FHPEYKSRPGKPSPLFLGLIAAA 546 (601)
Q Consensus 524 FHPE~ss~p~~p~pLF~~Fv~aa 546 (601)
||||+++ .....+|.+|+++.
T Consensus 195 FHPE~s~--~~g~~l~~~Fl~~~ 215 (555)
T 1jvn_A 195 FHPEKSG--KAGLNVIENFLKQQ 215 (555)
T ss_dssp SBGGGSH--HHHHHHHHHHHTTC
T ss_pred eCcEecC--hhHHHHHHHHHhcc
Confidence 9999863 22467999999875
No 36
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=99.48 E-value=7.5e-13 Score=137.80 Aligned_cols=207 Identities=14% Similarity=0.090 Sum_probs=118.7
Q ss_pred CceEEEEEcccCCCcchHH-HHHHHHHHccccceeEEEEEeecCCCcccccc-cCCch-hhhHHHH-hccCCCEEEECCC
Q 007496 296 EPVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATE-KENPD-AYKAAWK-LLKGADGILVPGG 371 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY~-SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~-~~~p~-~y~~a~~-~L~~~DGIlvpGG 371 (601)
..+||+|+ +--.....|. .+.+.|.....++. +.++...+-+..+. .+-.. .|....+ ...++||+||+||
T Consensus 46 rplkI~IL-nlmp~k~~te~qf~rlL~~~~~qv~----v~~~~~~~~~~~~~~~~hl~~~y~~f~~~~~~~~DglIITGs 120 (312)
T 2h2w_A 46 RPLEILIL-NLMPDKIKTEIQLLRLLGNTPLQVN----VTLLYTETHKPKHTPIEHILKFYTTFSAVKDRKFDGFIITGA 120 (312)
T ss_dssp CCEEEEEE-CCCSSHHHHHHHHHHHHHSSSSCEE----EEEECCSCCCCCSSCHHHHHHHCBCGGGTTTCCEEEEEECCC
T ss_pred CCceEEEE-eCCCCcCchHHHHHHHhcCCCCcEE----EEEEEccCCCCCCccHHHHhhccCCcccccccCcCEEEECCC
Confidence 46899999 4443333333 45566655555433 33333322111110 00000 1111111 1367999999999
Q ss_pred CCC-------CchhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhcccc-ccccCCCCCccCCCCCCCeeeeCCCCCcccC
Q 007496 372 FGN-------RGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSV-LNLRDANSTEFDPNTKNPCVIFMPEGSKTHM 443 (601)
Q Consensus 372 fG~-------rg~eg~i~aik~are~~iP~LGICLGmQllaiefgrnV-~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~ 443 (601)
|-. +-+......+++++++++|+||||+|+|+++.++++-+ ..++
T Consensus 121 P~~~~~~ed~~yw~el~~li~~~~~~~~p~LGIC~GaQ~~l~~~~G~~k~~~~--------------------------- 173 (312)
T 2h2w_A 121 PVELLPFEEVDYWEELTEIMEWSRHNVYSTMFICWAAQAGLYYFYGIPKYELP--------------------------- 173 (312)
T ss_dssp SCTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHHCCCCEEEE---------------------------
T ss_pred CCCCCCCccCchHHHHHHHHHHHHHcCCcEEEECHHHHHHHHHhCCCccccCC---------------------------
Confidence 843 22466778899999999999999999999766666522 1110
Q ss_pred CCceeeCceeEEEccCCchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEECCCCcEEEEc
Q 007496 444 GGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQ 523 (601)
Q Consensus 444 GgtmrLG~~~v~l~~~~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffvGVQ 523 (601)
...+|..+..+.+.+++++.+ +... ..-|.|--++..+.+... +|++++|.|+... +.+++.++.. ++++|
T Consensus 174 --~K~~Gv~~~~~~~~~pL~~g~-~~~f--~vphsr~~e~~~~~v~~~--pga~vLA~S~~~~-~q~~~~~~~~-~~~vQ 244 (312)
T 2h2w_A 174 --QKLSGVYKHRVAKDSVLFRGH-DDFF--WAPHSRYTEVKKEDIDKV--PELEILAESDEAG-VYVVANKSER-QIFVT 244 (312)
T ss_dssp --EEEEEEEEEEESSCCGGGTTC-CSEE--EEEEEEEEECCHHHHTTC--C-CEEEEEETTTE-EEEEECSSSS-EEEEC
T ss_pred --CCEEEEEEEEEcCCCccccCC-CCce--EeeEEeccccCHHHccCC--CCCEEEEcCCCCc-ceEEEecCCC-EEEEE
Confidence 112355666665543444433 2222 234433234454555443 5999999988765 8999997765 66999
Q ss_pred ccCCCcCCCCCchHHHHHHHHHHhc
Q 007496 524 FHPEYKSRPGKPSPLFLGLIAAACG 548 (601)
Q Consensus 524 FHPE~ss~p~~p~pLF~~Fv~aa~~ 548 (601)
|||||... -|-..+.+...+
T Consensus 245 gHPEyd~~-----~l~~ey~rd~~~ 264 (312)
T 2h2w_A 245 GHPEYDRY-----TLRDEYYRDIGR 264 (312)
T ss_dssp SCTTCCTT-----HHHHHHHHHHHT
T ss_pred CCCCCCHH-----HHHHHHHHHHHc
Confidence 99999754 344445544443
No 37
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=99.47 E-value=6.3e-13 Score=137.85 Aligned_cols=196 Identities=14% Similarity=0.135 Sum_probs=112.4
Q ss_pred CceEEEEEcccCCCcchHH-HHHHHHHHccccceeEEEEEeecCCCcccccccCCc-hhhhHHHH-hccCCCEEEECCCC
Q 007496 296 EPVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENP-DAYKAAWK-LLKGADGILVPGGF 372 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY~-SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p-~~y~~a~~-~L~~~DGIlvpGGf 372 (601)
..+||+|+ +--.....|. .+.+.|.....++.+ ....+.+.+... +..+-. ..|....+ ...++||+||+|||
T Consensus 34 rplkI~IL-nlmp~k~~te~qf~rlL~~~~~qv~v--~~~~~~~~~~~~-~~~~hl~~~y~~f~~~~~~~~DglIITGap 109 (301)
T 2vdj_A 34 RALKIAIL-NLMPTKQETEAQLLRLIGNTPLQLDV--HLLHMESHLSRN-VAQEHLTSFYKTFRDIENEKFDGLIITGAP 109 (301)
T ss_dssp CCEEEEEE-CCCSSHHHHHHHHHHHHTCSSSCEEE--EEECCCC-------------CCEECHHHHTTSCEEEEEECCCT
T ss_pred CCceEEEE-eCCCCcCchHHHHHHHhcCCCCcEEE--EEEeccCCCCCC-ccHHHHhhcccCcccccccccCEEEECCCC
Confidence 46899999 4443333333 445555555444332 233332211100 000000 11222222 24689999999998
Q ss_pred CC-------CchhHHHHHHHHHHHcCCCEEEEehhHHHHHHHhccc-cccccCCCCCccCCCCCCCeeeeCCCCCcccCC
Q 007496 373 GN-------RGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARS-VLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMG 444 (601)
Q Consensus 373 G~-------rg~eg~i~aik~are~~iP~LGICLGmQllaiefgrn-V~gl~da~S~Ef~~~~~~pvi~~mpe~~~~h~G 444 (601)
-. +-+......+++++++++|+||||+|+|+++.++++- ...+.
T Consensus 110 ~~~~~~ed~~yw~el~~li~~~~~~~~~~lgIC~GaQ~~l~~~~G~~k~~~~---------------------------- 161 (301)
T 2vdj_A 110 VETLSFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGLYHHYGVQKYPLK---------------------------- 161 (301)
T ss_dssp TTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHHCCCCEEEE----------------------------
T ss_pred CcCCCcccCchHHHHHHHHHHHHHcCCcEEEEcHHHHHHHHHhCCCccccCC----------------------------
Confidence 42 2246677889999999999999999999966665542 22111
Q ss_pred CceeeCceeEEEcc-CCchhhhccCCceeEeeeeceeeeeChhhHhhhccCCeEEEEEeCCCCeEEEEEECCCCcEEEEc
Q 007496 445 GTMRLGSRRTYFQI-KDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQ 523 (601)
Q Consensus 445 gtmrLG~~~v~l~~-~~s~l~~lyg~~~~I~erhrHrYeVn~~~v~~le~~Gl~~~g~s~dg~~vE~IE~~~hpffvGVQ 523 (601)
....|..+..+.. .+++++.+ +.. ...-|.|.-++..+.+..+ +|++++|.|+... +.++..++.. ++++|
T Consensus 162 -~K~~Gv~~~~~~~~~~pL~~g~-~~~--f~~phsr~~~~~~~~v~~~--pga~vLA~S~~~~-~~~~~~~~~~-~~~vQ 233 (301)
T 2vdj_A 162 -EKMFGVFEHEVREQHVKLLQGF-DEL--FFAVHSRHTEVRESDIREV--KELTLLANSEEAG-VHLVIGQEGR-QVFAL 233 (301)
T ss_dssp -EEEEEEEEEEECCSSCGGGTTC-CSE--EEEEEEEEEECCHHHHHTC--TTEEEEEEETTTE-EEEEEEGGGT-EEEEC
T ss_pred -CCEEEEEEEEecCCCCccccCC-CCc--eEeeeEeccCcCHHHccCC--CCCEEEEeCCCCc-ceEEEecCCC-EEEEE
Confidence 1123445555433 22444433 222 2234433345555666654 4999999988765 8999997755 56999
Q ss_pred ccCCCcCC
Q 007496 524 FHPEYKSR 531 (601)
Q Consensus 524 FHPE~ss~ 531 (601)
|||||...
T Consensus 234 gHpEyd~~ 241 (301)
T 2vdj_A 234 GHSEYSCD 241 (301)
T ss_dssp SCTTCCTT
T ss_pred CCCCCCHH
Confidence 99999755
No 38
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=98.91 E-value=1.3e-08 Score=122.86 Aligned_cols=197 Identities=19% Similarity=0.199 Sum_probs=114.1
Q ss_pred ceEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCC--CC
Q 007496 297 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF--GN 374 (601)
Q Consensus 297 ~v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGf--G~ 374 (601)
++||+|+ +|... ..-.++.+||+++|++.. +.|+. ++.. ++ +.|+++|+|++|||| ||
T Consensus 1047 ~pkVaIi-~~~G~-N~~~~~~~A~~~aG~~~~----~v~~~--dl~~-----~~-------~~l~~~d~lvlPGGfSygD 1106 (1303)
T 3ugj_A 1047 RPKVAVL-REQGV-NSHVEMAAAFHRAGFDAI----DVHMS--DLLG-----GR-------IGLGNFHALVACGGFSYGD 1106 (1303)
T ss_dssp CCEEEEE-ECTTC-CCHHHHHHHHHHTTCEEE----EEEHH--HHHT-----TS-------CCGGGCSEEEECCSCGGGG
T ss_pred CCEEEEE-ecCCc-CCHHHHHHHHHHhCCceE----EEeec--cccc-----Cc-------ccHhhCCEEEECCCCcchh
Confidence 5699999 57433 255789999999998753 23442 1110 00 346889999999996 44
Q ss_pred C---ch---------hHHHHHHHHHH-HcCCCEEEEehhHHHHHHHhccccccccCCCCCccCCCCCCCeeeeCCCCCcc
Q 007496 375 R---GV---------QGKILAAKYAR-EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKT 441 (601)
Q Consensus 375 r---g~---------eg~i~aik~ar-e~~iP~LGICLGmQllaiefgrnV~gl~da~S~Ef~~~~~~pvi~~mpe~~~~ 441 (601)
. +. ..+..+++.+. +.++|+||||+|||+|+ +.. .+ ++.+ + ..| .++..
T Consensus 1107 ~l~~g~~~a~~~l~~~~l~~~l~~~~~~~g~pvLGICnG~QlL~-e~~-gl--lPg~---~-----~~p--~l~~N---- 1168 (1303)
T 3ugj_A 1107 VLGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQMMS-NLR-EL--IPGS---E-----LWP--RFVRN---- 1168 (1303)
T ss_dssp TTSTTHHHHHHHHTSHHHHHHHHHHHHSSSCEEEEETHHHHHHH-TTG-GG--STTC---T-----TCC--EEECC----
T ss_pred hhccchhHHHHHHhchhHHHHHHHHHHhCCCcEEEECHHHHHHH-Hhc-Cc--CCCC---C-----CCC--eEecC----
Confidence 1 10 23445566543 56899999999999996 321 12 2222 1 111 12221
Q ss_pred cCCCceeeCceeEEEccCCc-hhhhccCCceeEeeeec-eeeeeC-hhhHhhhccCCeEEEEE-------------eCCC
Q 007496 442 HMGGTMRLGSRRTYFQIKDC-KSAKLYGNRTFIDERHR-HRYEVN-PDMIARLENAGLSFTGK-------------DETS 505 (601)
Q Consensus 442 h~GgtmrLG~~~v~l~~~~s-~l~~lyg~~~~I~erhr-HrYeVn-~~~v~~le~~Gl~~~g~-------------s~dg 505 (601)
..+...--.-.+++..+.| +++.+-|....|...|. -||.+. ++.+++|+.+|....-+ |++|
T Consensus 1169 -~s~~f~~r~~~~~v~~~~s~~~~~~~g~~~~i~vaHgEG~~~~~~~~~l~~l~~~~~v~~rY~d~~g~~~~~yp~NPNG 1247 (1303)
T 3ugj_A 1169 -HSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEVRDDAHLAALESKGLVALRYVDNFGKVTETYPANPNG 1247 (1303)
T ss_dssp -TTSSCEEEEEEEEECCCSCGGGTTCTTCEEEEEEEESSCEEECSSHHHHHHHHHTTCEEEEEBCTTSCBCCSTTTSSSC
T ss_pred -CCCCeEEeCeEEEECCCCChhhhccCCCEEeeeeEeCCCCeeeCCHHHHHHHHhCCcEEEEEeCCCCCcccCCCCCCCC
Confidence 1111100011233333323 44444333344667885 345554 45677787788766554 3566
Q ss_pred Ce--EEEEEECCCCcEEEEcccCCCcCCCC
Q 007496 506 QR--MEIVELPNHPYFIGVQFHPEYKSRPG 533 (601)
Q Consensus 506 ~~--vE~IE~~~hpffvGVQFHPE~ss~p~ 533 (601)
.. +++|-.++.. ++|...|||....+.
T Consensus 1248 S~~~IaGi~s~~Gr-vlg~MpHPEr~~~~~ 1276 (1303)
T 3ugj_A 1248 SPNGITAVTTENGR-VTIMMPHPERVFRTV 1276 (1303)
T ss_dssp CGGGEEEEECTTSS-EEEESSBGGGSSBGG
T ss_pred ChhhceEeECCCCC-EEEEcCChHHccccc
Confidence 53 8899888877 569999999876643
No 39
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.29 E-value=6.5e-07 Score=87.87 Aligned_cols=92 Identities=15% Similarity=0.037 Sum_probs=63.3
Q ss_pred ceEEEEEcccCCC---cchH-HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCC
Q 007496 297 PVRIAMVGKYTGL---SDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF 372 (601)
Q Consensus 297 ~v~IalVGkY~~l---~DaY-~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGf 372 (601)
..+|++| .|... .|.| .|+.++|++.|+++.+ ++-.+- ++ .+..+.+.++|+|++|||-
T Consensus 27 ~~~i~~I-p~As~~~~~~~~~~s~~~a~~~lG~~v~~------~~i~~~-------~~---~~~~~~l~~ad~I~l~GG~ 89 (206)
T 3l4e_A 27 GKTVTFI-PTASTVEEVTFYVEAGKKALESLGLLVEE------LDIATE-------SL---GEITTKLRKNDFIYVTGGN 89 (206)
T ss_dssp TCEEEEE-CGGGGGCSCCHHHHHHHHHHHHTTCEEEE------CCTTTS-------CH---HHHHHHHHHSSEEEECCSC
T ss_pred CCEEEEE-CCCCCCCCHHHHHHHHHHHHHHcCCeEEE------EEecCC-------Ch---HHHHHHHHhCCEEEECCCC
Confidence 4699999 48643 2235 5899999999986432 221110 11 1122567899999999952
Q ss_pred CCCc-----hhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007496 373 GNRG-----VQGKILAAKYAREHRIPYLGICLGMQVAV 405 (601)
Q Consensus 373 G~rg-----~eg~i~aik~are~~iP~LGICLGmQlla 405 (601)
-.+- ..++.++++.+.++++|++|||+|||+++
T Consensus 90 ~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~sAGa~~l~ 127 (206)
T 3l4e_A 90 TFFLLQELKRTGADKLILEEIAAGKLYIGESAGAVITS 127 (206)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHTTCEEEEETHHHHTTS
T ss_pred HHHHHHHHHHCChHHHHHHHHHcCCeEEEECHHHHHhc
Confidence 2111 24678889999889999999999999995
No 40
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=98.25 E-value=4.3e-07 Score=90.24 Aligned_cols=88 Identities=18% Similarity=0.240 Sum_probs=61.1
Q ss_pred ceEEEEEcccCC---CcchH-HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCC
Q 007496 297 PVRIAMVGKYTG---LSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF 372 (601)
Q Consensus 297 ~v~IalVGkY~~---l~DaY-~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGf 372 (601)
..+|++| .|.. -.|.| .|+.++|++.|+++.. +... . + ..+.+.++|+|++|||-
T Consensus 31 ~~~i~iI-~~a~~~~~~~~~~~~~~~al~~lG~~~~~------v~~~--~------d------~~~~l~~ad~I~lpGG~ 89 (229)
T 1fy2_A 31 RRSAVFI-PFAGVTQTWDEYTDKTAEVLAPLGVNVTG------IHRV--A------D------PLAAIEKAEIIIVGGGN 89 (229)
T ss_dssp CCEEEEE-CTTCCSSCHHHHHHHHHHHHGGGTCEEEE------TTSS--S------C------HHHHHHHCSEEEECCSC
T ss_pred CCeEEEE-ECCCCCCCHHHHHHHHHHHHHHCCCEEEE------Eecc--c------c------HHHHHhcCCEEEECCCc
Confidence 4689999 5863 22344 5889999999975322 2110 0 0 12567889999999953
Q ss_pred CCCc-----hhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007496 373 GNRG-----VQGKILAAKYAREHRIPYLGICLGMQVAV 405 (601)
Q Consensus 373 G~rg-----~eg~i~aik~are~~iP~LGICLGmQlla 405 (601)
-.+- ..++.++++.+.++++|++|||+|||+|+
T Consensus 90 ~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG~~~l~ 127 (229)
T 1fy2_A 90 TFQLLKESRERGLLAPMADRVKRGALYIGWSAGANLAC 127 (229)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHHTS
T ss_pred HHHHHHHHHHCChHHHHHHHHHcCCEEEEECHHHHhhc
Confidence 2221 13577888888888999999999999995
No 41
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=97.40 E-value=0.00036 Score=66.86 Aligned_cols=103 Identities=16% Similarity=0.151 Sum_probs=62.7
Q ss_pred CceEEEEEcccCCCcc-hHHHHHHHHHHccccceeEEEEEeecCCC-cccc----cccCCchhhhHHHHhccCCCEEEEC
Q 007496 296 EPVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACD-LEDA----TEKENPDAYKAAWKLLKGADGILVP 369 (601)
Q Consensus 296 ~~v~IalVGkY~~l~D-aY~SIi~aL~~ag~~~~vkv~i~wi~s~~-le~~----~~~~~p~~y~~a~~~L~~~DGIlvp 369 (601)
...||+++- +....+ ......+.|+.+|+++.+ ...+... +... ....+. .+.+ -....+|+|+||
T Consensus 22 ~~~kV~ill-~~g~~~~e~~~~~~~l~~ag~~v~~----vs~~~~~~v~~~~g~~~v~~~~-~l~~--~~~~~~D~livp 93 (193)
T 1oi4_A 22 LSKKIAVLI-TDEFEDSEFTSPADEFRKAGHEVIT----IEKQAGKTVKGKKGEASVTIDK-SIDE--VTPAEFDALLLP 93 (193)
T ss_dssp CCCEEEEEC-CTTBCTHHHHHHHHHHHHTTCEEEE----EESSTTCEEECTTSSCEEECCE-EGGG--CCGGGCSEEEEC
T ss_pred cCCEEEEEE-CCCCCHHHHHHHHHHHHHCCCEEEE----EECCCCcceecCCCCeEEECCC-ChHH--CCcccCCEEEEC
Confidence 346889883 544432 345778999999876533 2211111 1000 000000 0100 012578999999
Q ss_pred CCCCCCc---hhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007496 370 GGFGNRG---VQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (601)
Q Consensus 370 GGfG~rg---~eg~i~aik~are~~iP~LGICLGmQllai 406 (601)
||+|... .+..+..++.+.++++|+.|||.|.|+|+-
T Consensus 94 GG~~~~~l~~~~~l~~~l~~~~~~gk~i~aIC~G~~lLa~ 133 (193)
T 1oi4_A 94 GGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLIS 133 (193)
T ss_dssp CBTHHHHHTTSHHHHHHHHHHHHTTCCEEEETTTHHHHHH
T ss_pred CCcCHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHH
Confidence 9976422 345778888888999999999999999974
No 42
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=96.84 E-value=0.0051 Score=57.71 Aligned_cols=97 Identities=15% Similarity=0.213 Sum_probs=70.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEecCCccccCCCCccccccCC
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 80 (601)
||.|.|+++ -.|.||=.+|+.++..|..+|.||..+..||.-|.- .|+..
T Consensus 1 M~vi~v~s~-kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~-----------------------------~~~~~ 50 (206)
T 4dzz_A 1 MKVISFLNP-KGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLT-----------------------------NWSKA 50 (206)
T ss_dssp CEEEEECCS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-----------------------------HHHTT
T ss_pred CeEEEEEeC-CCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHH-----------------------------HHHhc
Confidence 888999876 788999999999999999999999999999753321 01110
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 007496 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (601)
Q Consensus 81 ~l~~~~n~t~gkiy~~vi~ker~g~ylg~tvqviphit~~i~~~i~~~~~~~~d~~~~~~dv~i~e~ggtvgdies~pf~ 160 (601)
. .. .+.++|--.+.+.+.+.++. ..+|++||+.++..++ ...
T Consensus 51 ~---~~-----------------------~~~~~~~~~~~l~~~l~~l~--------~~yD~viiD~~~~~~~----~~~ 92 (206)
T 4dzz_A 51 G---KA-----------------------AFDVFTAASEKDVYGIRKDL--------ADYDFAIVDGAGSLSV----ITS 92 (206)
T ss_dssp S---CC-----------------------SSEEEECCSHHHHHTHHHHT--------TTSSEEEEECCSSSSH----HHH
T ss_pred C---CC-----------------------CCcEEecCcHHHHHHHHHhc--------CCCCEEEEECCCCCCH----HHH
Confidence 0 00 04566655688888888875 3699999999998854 334
Q ss_pred HHHHH
Q 007496 161 EALGQ 165 (601)
Q Consensus 161 ea~rq 165 (601)
.+++.
T Consensus 93 ~~l~~ 97 (206)
T 4dzz_A 93 AAVMV 97 (206)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 43
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=96.83 E-value=0.0026 Score=58.94 Aligned_cols=102 Identities=15% Similarity=0.263 Sum_probs=60.8
Q ss_pred ceEEEEEcccCCCcc-hHHHHHHHHHHccccceeEEEEEeecCCCcccc-cccCCchhhhHHHHhc--cCCCEEEECCCC
Q 007496 297 PVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLEDA-TEKENPDAYKAAWKLL--KGADGILVPGGF 372 (601)
Q Consensus 297 ~v~IalVGkY~~l~D-aY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~-~~~~~p~~y~~a~~~L--~~~DGIlvpGGf 372 (601)
.+||+++- |....+ ......+.|+.+++++.+ ...+...+... ...-.++. ..+.+ ..+|.|+||||+
T Consensus 2 ~~ki~il~-~~g~~~~e~~~~~~~l~~ag~~v~~----vs~~~~~v~~~~g~~i~~~~---~~~~~~~~~~D~livpGG~ 73 (168)
T 3l18_A 2 SMKVLFLS-ADGFEDLELIYPLHRIKEEGHEVYV----ASFQRGKITGKHGYSVNVDL---TFEEVDPDEFDALVLPGGK 73 (168)
T ss_dssp CCEEEEEC-CTTBCHHHHHHHHHHHHHTTCEEEE----EESSSEEEECTTSCEEEECE---EGGGCCGGGCSEEEECCBS
T ss_pred CcEEEEEe-CCCccHHHHHHHHHHHHHCCCEEEE----EECCCCEEecCCCcEEeccC---ChhHCCHhhCCEEEECCCc
Confidence 46788883 554432 234677889988876533 11111001000 00000000 01222 368999999998
Q ss_pred CCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007496 373 GNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (601)
Q Consensus 373 G~r---g~eg~i~aik~are~~iP~LGICLGmQllai 406 (601)
|.. ..+..+..++.+.++++|+.+||-|.++|+-
T Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La~ 110 (168)
T 3l18_A 74 APEIVRLNEKAVMITRRMFEDDKPVASICHGPQILIS 110 (168)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHHH
T ss_pred CHHHhccCHHHHHHHHHHHHCCCEEEEECHhHHHHHH
Confidence 642 2356778899999999999999999999963
No 44
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=96.49 E-value=0.0085 Score=59.89 Aligned_cols=171 Identities=13% Similarity=0.143 Sum_probs=94.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEecCCccccCCCCcc----cc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNY----ER 76 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~y----er 76 (601)
||-||||| .=++.||=++++.|.+.|+.+|++|...| | .+.|-. ..+| .|-|...+ .|
T Consensus 21 ~k~i~Itg-T~t~vGKT~vs~gL~~~L~~~G~~V~~fK--P-----------v~~g~~--~~~~--~~~D~~~~~~~~~~ 82 (242)
T 3qxc_A 21 GHMLFISA-TNTNAGKTTCARLLAQYCNACGVKTILLK--P-----------IETGVN--DAIN--HSSDAHLFLQDNRL 82 (242)
T ss_dssp CEEEEEEE-SSTTSSHHHHHHHHHHHHHHTTCCEEEEC--C-----------EECSCC--TTTC--CCSHHHHHHHHHHT
T ss_pred CcEEEEEe-CCCCCcHHHHHHHHHHHHHhCCCceEEEe--e-----------eecCCc--ccCC--CCchHHHHHHHHHH
Confidence 47889986 56999999999999999999999999988 2 222210 0001 22233333 34
Q ss_pred cc-CCCCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcccccc-
Q 007496 77 FM-DIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDI- 154 (601)
Q Consensus 77 f~-~~~l~~~~n~t~gkiy~~vi~ker~g~ylg~tvqviphit~~i~~~i~~~~~~~~d~~~~~~dv~i~e~ggtvgdi- 154 (601)
+. ++....-+-++--.-.+--+..++.|.+ +. ---++|++.+++++. ++|++|||==|-+.+.
T Consensus 83 ~~~g~~~~~~~p~~~~~p~sp~~aa~~~g~~--~~-----i~~~~I~~~~~~l~~--------~~D~vlIEGagGl~~pl 147 (242)
T 3qxc_A 83 LDRSLTLKDISFYRYHKVSAPLIAQQEEDPN--AP-----IDTDNLTQRLHNFTK--------TYDLVIVEGAGGLCVPI 147 (242)
T ss_dssp TCTTCCHHHHCCEECSSSSCHHHHHHHHCTT--CC-----CCHHHHHHHHHHGGG--------TCSEEEEECCSCTTCBS
T ss_pred HhCCCChHHeeeEEECCCCChHHHHHHcCCC--Cc-----CCHHHHHHHHHHHHh--------cCCEEEEECCCCccccc
Confidence 33 3221000000000000011222333332 11 134788898888863 6899999976655542
Q ss_pred -CcchHHHHHHHHhhHcCCCCEEEEeeeeeeeecCC-CccccCCccchhhhhhcCCCcccEEEEecC
Q 007496 155 -ESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVV-GEQKTKPTQHSVRGLRGQGLTPNILACRST 219 (601)
Q Consensus 155 -es~pf~ea~rq~~~~~g~~n~~~ih~~~vp~~~~~-~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~~ 219 (601)
+..-..+-++++... + |.+.... | --.-|.-+++.|+..|+. .++|+-..
T Consensus 148 ~~~~~~adlA~~l~~p-----V-------ILV~~~~lg--~i~~~~lt~~~l~~~g~~-~GvIlN~v 199 (242)
T 3qxc_A 148 TLEENMLDFALKLKAK-----M-------LLISHDNLG--LINDCLLNDFLLKSHQLD-YKIAINLK 199 (242)
T ss_dssp SSSCBHHHHHHHHTCE-----E-------EEEECCSTT--HHHHHHHHHHHHHTSSSC-EEEEECCC
T ss_pred cccchHHHHHHHcCCC-----E-------EEEEcCCCc--HHHHHHHHHHHHHhCCCC-EEEEEeCC
Confidence 333445666666432 1 2222211 2 112456677788899999 99888543
No 45
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=96.02 E-value=0.012 Score=57.99 Aligned_cols=168 Identities=14% Similarity=0.172 Sum_probs=92.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEecCCccccCCCCccccccCC
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 80 (601)
||-||||| .=++.||=++++.|.+.|+.+|++|...| |.++|-.+ .+|| ..|-|.-. +..+.
T Consensus 4 mk~i~Itg-t~t~vGKT~vt~~L~~~l~~~G~~V~~~K-------------Pv~~g~~~-~~~~-~~~~D~~~--~~~~~ 65 (228)
T 3of5_A 4 MKKFFIIG-TDTEVGKTYISTKLIEVCEHQNIKSLCLK-------------PVASGQSQ-FSEL-CEDVESIL--NAYKH 65 (228)
T ss_dssp CEEEEEEE-SSSSSCHHHHHHHHHHHHHHTTCCEEEEC-------------SEEESBCS-SSSS-BHHHHHHH--HHTTT
T ss_pred CcEEEEEe-CCCCCCHHHHHHHHHHHHHHCCCeeEEec-------------ceeecCcc-CCCC-CChHHHHH--HhcCC
Confidence 78899986 56999999999999999999999999866 45555322 1222 21222211 22222
Q ss_pred CCCCCCcccchHhh----HHHHhhhhcCCCCCCeeEEcccchHHHHHHHHH-HhcccCCCCCCCCcEEEEeeCccccc--
Q 007496 81 KLTRDNNITTGKIY----QSVIDKERKGDYLGKTVQVVPHITDEIQDWIER-VAMIPVDGKEGPVDVCVIELGGTIGD-- 153 (601)
Q Consensus 81 ~l~~~~n~t~gkiy----~~vi~ker~g~ylg~tvqviphit~~i~~~i~~-~~~~~~d~~~~~~dv~i~e~ggtvgd-- 153 (601)
.++.++ + ..-.| +--+..++.| + +---+.|++.+++ ++ .++|++|||--|-+.+
T Consensus 66 ~~~~~~-~-~~~~~~~p~sp~~aa~~~~----~-----~i~~~~i~~~~~~~l~--------~~~D~vlIEgaggl~~p~ 126 (228)
T 3of5_A 66 KFTAAE-I-NLISFNQAVAPHIIAAKTK----V-----DISIENLKQFIEDKYN--------QDLDILFIEGAGGLLTPY 126 (228)
T ss_dssp SSCHHH-H-CSEEESSSSCHHHHHHHTT----C-----CCCHHHHHHHHHGGGG--------SSCSEEEEEEEEETTCBS
T ss_pred CCChhh-E-EEEEECCCCCHHHHHHHcC----C-----CCCHHHHHHHHHHHHH--------ccCCEEEEECCCcccccc
Confidence 221100 0 00001 0011112222 1 1123778888887 65 3789999996554433
Q ss_pred cCcchHHHHHHHHhhHcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhcCCCcccEEEEec
Q 007496 154 IESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRS 218 (601)
Q Consensus 154 ies~pf~ea~rq~~~~~g~~n~~~ih~~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~ 218 (601)
-+..-..+-++++... +++ +... +-..-.-+..+++.|+..|+...++|+-.
T Consensus 127 ~~~~~~adla~~l~~p-----viL-------V~~~-~~~~i~~~~~~~~~l~~~~~~i~GvIlN~ 178 (228)
T 3of5_A 127 SDHTTQLDLIKALQIP-----VLL-------VSAI-KVGCINHTLLTINELNRHNIKLAGWIANC 178 (228)
T ss_dssp SSSCBHHHHHHHHTCC-----EEE-------EEEC-STTHHHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ccchhHHHHHHHcCCC-----EEE-------EEcC-CcchHHHHHHHHHHHHhCCCcEEEEEEEC
Confidence 1233344555555321 221 1211 11112235566777889999999988854
No 46
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=95.87 E-value=0.0064 Score=57.89 Aligned_cols=45 Identities=20% Similarity=0.152 Sum_probs=38.6
Q ss_pred cCCCEEEECCCCCCCc---hhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007496 361 KGADGILVPGGFGNRG---VQGKILAAKYAREHRIPYLGICLGMQVAV 405 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg---~eg~i~aik~are~~iP~LGICLGmQlla 405 (601)
.++|+|+||||+|... .+..+..++.+.++++|+.+||-|-++|+
T Consensus 68 ~~yD~liiPGG~g~~~l~~~~~~~~~l~~~~~~~k~iaaIC~g~~~La 115 (177)
T 4hcj_A 68 VEFDAVVFVGGIGCITLWDDWRTQGLAKLFLDNQKIVAGIGSGVVIMA 115 (177)
T ss_dssp GGCSEEEECCSGGGGGGTTCHHHHHHHHHHHHTTCEEEEETTHHHHHH
T ss_pred hHCCEEEECCCccHHHHhhCHHHHHHHHHHHHhCCEEEEecccHHHHH
Confidence 5789999999988643 35678889999999999999999998886
No 47
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=95.47 E-value=0.076 Score=51.93 Aligned_cols=41 Identities=29% Similarity=0.453 Sum_probs=37.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (601)
||.|.|+++ -.|.||=.+|+.++..|..+|.+|..+..||.
T Consensus 2 ~~~I~v~s~-kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 42 (263)
T 1hyq_A 2 VRTITVASG-KGGTGKTTITANLGVALAQLGHDVTIVDADIT 42 (263)
T ss_dssp CEEEEEEES-SSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred CeEEEEECC-CCCCCHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 478888875 57999999999999999999999999999985
No 48
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=95.24 E-value=0.033 Score=55.91 Aligned_cols=167 Identities=19% Similarity=0.220 Sum_probs=89.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEecCCccccCCCCccccccCC
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 80 (601)
||-||||| .=|+.||=++++.|.+.|+.+|++|...| |.+.|-. .|+ -|.....+..+.
T Consensus 26 m~~i~Itg-t~t~vGKT~vt~gL~~~l~~~G~~V~~fK-------------Pv~~g~~---~~~----~D~~~~~~~~g~ 84 (251)
T 3fgn_A 26 MTILVVTG-TGTGVGKTVVCAALASAARQAGIDVAVCK-------------PVQTGTA---RGD----DDLAEVGRLAGV 84 (251)
T ss_dssp CEEEEEEE-SSTTSCHHHHHHHHHHHHHHTTCCEEEEE-------------EEECCGG---GTC----CHHHHHHHHHCC
T ss_pred CCEEEEEe-CCCCCcHHHHHHHHHHHHHHCCCeEEEEe-------------eeecCCC---CCC----HHHHHHHHHcCC
Confidence 68888885 67999999999999999999999999988 2232210 111 222222333322
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcccccc--Cc-c
Q 007496 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDI--ES-M 157 (601)
Q Consensus 81 ~l~~~~n~t~gkiy~~vi~ker~g~ylg~tvqviphit~~i~~~i~~~~~~~~d~~~~~~dv~i~e~ggtvgdi--es-~ 157 (601)
... .|-++--.-.+--+..++.|.. +---++|++.+++.+ .++|++|||==|-+.|- +. .
T Consensus 85 ~~~-~~~~~~~~p~sP~~aa~~~~~~--------~~~~~~i~~~~~~l~--------~~~D~vlIEGagGl~~pl~~~~~ 147 (251)
T 3fgn_A 85 TQL-AGLARYPQPMAPAAAAEHAGMA--------LPARDQIVRLIADLD--------RPGRLTLVEGAGGLLVELAEPGV 147 (251)
T ss_dssp CEE-EEEEECSSSSCHHHHHHHTTCC--------CCCHHHHHHHHHTTC--------CTTCEEEEECSSSTTCEEETTTE
T ss_pred CCC-CCCeeECCCCChHHHHHHcCCC--------CCCHHHHHHHHHHHH--------hcCCEEEEECCCCCcCCcCcccc
Confidence 211 0100000000111112222210 011356788887764 47899999975555431 21 2
Q ss_pred hHHHHHHHHhhHcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhcCCCcccEEEEec
Q 007496 158 PFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRS 218 (601)
Q Consensus 158 pf~ea~rq~~~~~g~~n~~~ih~~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~ 218 (601)
-..+-++++... + |.+... +.-.-.-+.-+++.|+..|+...++|+-.
T Consensus 148 ~~adla~~l~~p-----V-------ILV~~~-~~g~i~~~~lt~~~l~~~g~~i~GvIlN~ 195 (251)
T 3fgn_A 148 TLRDVAVDVAAA-----A-------LVVVTA-DLGTLNHTKLTLEALAAQQVSCAGLVIGS 195 (251)
T ss_dssp EHHHHHHHTTCE-----E-------EEEECS-STTHHHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred hHHHHHHHcCCC-----E-------EEEEcC-CCccHHHHHHHHHHHHhCCCCEEEEEEEC
Confidence 333444554322 1 122222 11111235566777888999999999854
No 49
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=95.17 E-value=0.013 Score=58.47 Aligned_cols=47 Identities=21% Similarity=0.313 Sum_probs=39.3
Q ss_pred cCCCEEEECCCCCC---------------CchhHHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 007496 361 KGADGILVPGGFGN---------------RGVQGKILAAKYAREHRIPYLGICLGMQVAVIE 407 (601)
Q Consensus 361 ~~~DGIlvpGGfG~---------------rg~eg~i~aik~are~~iP~LGICLGmQllaie 407 (601)
.++|+|+||||+|. +..+..+..++.+.++++|+.+||-|-.+|+-+
T Consensus 106 ~~~D~livPGG~~~~~~L~~~~~~~~~~~~~~~~l~~~lr~~~~~gk~IaaIC~G~~~La~a 167 (242)
T 3l3b_A 106 EEFDMLVIPGGYGVAKNFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISPAVVVAL 167 (242)
T ss_dssp GGCSEEEECCCHHHHHHHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEEETTHHHHHHHH
T ss_pred ccCCEEEEcCCcchhhhhhhhhccccccccCCHHHHHHHHHHHHcCCEEEEECHHHHHHHHh
Confidence 47899999999863 233567888999999999999999999999754
No 50
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=95.09 E-value=0.012 Score=55.57 Aligned_cols=100 Identities=19% Similarity=0.222 Sum_probs=59.9
Q ss_pred ceEEEEEcccCCCcc-hHHHHHHHHHHccccceeEEEEEeecCCCccc------c--cccCCchhhhHHHHhc--cCCCE
Q 007496 297 PVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLED------A--TEKENPDAYKAAWKLL--KGADG 365 (601)
Q Consensus 297 ~v~IalVGkY~~l~D-aY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~------~--~~~~~p~~y~~a~~~L--~~~DG 365 (601)
..||+++ -|..+.+ .+....+.|+.+++++.+ ...+...+.. . ....+ ..+ +.+ ..+|.
T Consensus 9 ~~~v~il-~~~g~~~~e~~~~~~~l~~ag~~v~~----vs~~~~~v~~~~~~~~~g~~v~~~-~~~----~~~~~~~~D~ 78 (190)
T 2vrn_A 9 GKKIAIL-AADGVEEIELTSPRAAIEAAGGTTEL----ISLEPGEIQSMKGDIEPQEKYRVD-HVV----SEVQVSDYDG 78 (190)
T ss_dssp TCEEEEE-CCTTCBHHHHHHHHHHHHHTTCEEEE----EESSSSEEEEEETTTEEEEEEECS-EEG----GGCCGGGCSE
T ss_pred CCEEEEE-eCCCCCHHHHHHHHHHHHHCCCEEEE----EecCCCccccccccccCCcEEeCC-CCh----hhCChhhCCE
Confidence 4688888 3654432 234567889988876533 1111111100 0 00000 011 222 57899
Q ss_pred EEECCCCCC----CchhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007496 366 ILVPGGFGN----RGVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (601)
Q Consensus 366 IlvpGGfG~----rg~eg~i~aik~are~~iP~LGICLGmQllai 406 (601)
|+||||++. +..+..+..++.+.++++|+.+||-|-++|+-
T Consensus 79 livpGG~~~~~~~~~~~~l~~~l~~~~~~gk~i~aiC~G~~~La~ 123 (190)
T 2vrn_A 79 LLLPGGTVNPDKLRLEEGAMKFVRDMYDAGKPIAAICHGPWSLSE 123 (190)
T ss_dssp EEECCCTHHHHHHTTCHHHHHHHHHHHHTTCCEEEC-CTTHHHHH
T ss_pred EEECCCchhHHHHhhCHHHHHHHHHHHHcCCEEEEECHhHHHHHh
Confidence 999999742 22456778889988999999999999999863
No 51
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=95.09 E-value=0.024 Score=53.77 Aligned_cols=44 Identities=20% Similarity=0.071 Sum_probs=36.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc-ccCC
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY-LNTD 46 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy-ln~d 46 (601)
|+.|.++| .||-||-.++..|-..|+.+|++|..+|.||. .++|
T Consensus 4 ~~~i~i~G--~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~~~~diD 48 (169)
T 1xjc_A 4 MNVWQVVG--YKHSGKTTLMEKWVAAAVREGWRVGTVKHHGHGGEPA 48 (169)
T ss_dssp CCEEEEEC--CTTSSHHHHHHHHHHHHHHTTCCEEEEECCC------
T ss_pred CEEEEEEC--CCCCCHHHHHHHHHHhhHhcCCeeeEEEeCCCCcccc
Confidence 57788999 78999999999999999999999999999997 5666
No 52
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.93 E-value=0.018 Score=53.55 Aligned_cols=46 Identities=15% Similarity=0.097 Sum_probs=37.6
Q ss_pred cCCCEEEECCC--C-CCC------chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007496 361 KGADGILVPGG--F-GNR------GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (601)
Q Consensus 361 ~~~DGIlvpGG--f-G~r------g~eg~i~aik~are~~iP~LGICLGmQllai 406 (601)
..+|.|+|||| + |.. ..+..+..++.+.++++|+.+||-|-++|+-
T Consensus 65 ~~~D~livpGG~~~~~~~~l~~~~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~ 119 (175)
T 3cne_A 65 DEFDALVFSCGDAVPVFQQYANQPYNVDLMEVIKTFGEKGKMMIGHCAGAMMFDF 119 (175)
T ss_dssp GGCSEEEEECCTTGGGGGGCTTCHHHHHHHHHHHHHHHTTCEEEEETTHHHHHHH
T ss_pred ccCCEEEECCCcCcccHHHHhhcccCHHHHHHHHHHHHCCCEEEEECHHHHHHHH
Confidence 67899999999 6 542 2345677888888899999999999999873
No 53
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=94.88 E-value=0.18 Score=49.77 Aligned_cols=42 Identities=21% Similarity=0.274 Sum_probs=37.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (601)
+|-|.|+++ -.|.||=.+|+.++..|..+|+||-.+..||.-
T Consensus 18 ~~vI~v~s~-kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 18 KSRIAVMSG-KGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp SCEEEEECS-SSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CeEEEEEcC-CCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 467788776 479999999999999999999999999999986
No 54
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=94.76 E-value=0.015 Score=55.41 Aligned_cols=102 Identities=14% Similarity=0.103 Sum_probs=59.7
Q ss_pred eEEEEEcccCCCcc-hHHHHHHHHHHccccceeEEEEEeecCC-Ccccc-cccCCch-hhhHHHHhccCCCEEEECCCCC
Q 007496 298 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPAC-DLEDA-TEKENPD-AYKAAWKLLKGADGILVPGGFG 373 (601)
Q Consensus 298 v~IalVGkY~~l~D-aY~SIi~aL~~ag~~~~vkv~i~wi~s~-~le~~-~~~~~p~-~y~~a~~~L~~~DGIlvpGGfG 373 (601)
.||+++- |..+.+ .+....+.|+.+++++.+ ...+.. .+... ...-.++ .+.++. ....+|.|+||||++
T Consensus 4 ~~v~ill-~~g~~~~e~~~~~~~l~~ag~~v~~----vs~~~~~~v~~~~g~~v~~d~~l~~~~-~~~~~D~livpGG~~ 77 (197)
T 2rk3_A 4 KRALVIL-AKGAEEMETVIPVDVMRRAGIKVTV----AGLAGKDPVQCSRDVVICPDASLEDAK-KEGPYDVVVLPGGNL 77 (197)
T ss_dssp CEEEEEE-CTTCCHHHHHHHHHHHHHTTCEEEE----EETTCSSCEECTTSCEECCSEEHHHHH-TTCCCSEEEECCCHH
T ss_pred CEEEEEE-CCCCcHHHHHHHHHHHHHCCCEEEE----EEcCCCCccccCCCCEEeCCcCHHHcC-CccCCCEEEECCCch
Confidence 4677773 544432 234677889999876433 222111 11100 0000010 111110 126899999999974
Q ss_pred CC----chhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007496 374 NR----GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (601)
Q Consensus 374 ~r----g~eg~i~aik~are~~iP~LGICLGmQlla 405 (601)
.. ..+..+..++.+.++++|+.+||-|-++|+
T Consensus 78 ~~~~l~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La 113 (197)
T 2rk3_A 78 GAQNLSESAAVKEILKEQENRKGLIATICAGPTALL 113 (197)
T ss_dssp HHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHH
T ss_pred hHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHH
Confidence 32 234577888888899999999999999986
No 55
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=94.65 E-value=0.045 Score=53.06 Aligned_cols=46 Identities=17% Similarity=0.173 Sum_probs=38.2
Q ss_pred cCCCEEEECCCCCCC-chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007496 361 KGADGILVPGGFGNR-GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (601)
Q Consensus 361 ~~~DGIlvpGGfG~r-g~eg~i~aik~are~~iP~LGICLGmQllai 406 (601)
..+|.|+||||.|.. ..+..+..++.+.++++|+.+||-|-++|+-
T Consensus 62 ~~~D~livpGG~~~~~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La~ 108 (206)
T 3f5d_A 62 ANFNLLVMIGGDSWSNDNKKLLHFVKTAFQKNIPIAAICGAVDFLAK 108 (206)
T ss_dssp SCCSEEEECCBSCCCCCCHHHHHHHHHHHHTTCCEEEETHHHHHHHH
T ss_pred cCCCEEEEcCCCChhhcCHHHHHHHHHHHHcCCEEEEECHHHHHHHH
Confidence 478999999998654 3345778888888999999999999999863
No 56
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=94.65 E-value=0.016 Score=54.74 Aligned_cols=45 Identities=20% Similarity=0.251 Sum_probs=37.2
Q ss_pred cCCCEEEECCCCCCC--chhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007496 361 KGADGILVPGGFGNR--GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (601)
Q Consensus 361 ~~~DGIlvpGGfG~r--g~eg~i~aik~are~~iP~LGICLGmQlla 405 (601)
..+|.|+||||++.. ..+..+..++.+.++++|+.+||-|-++|+
T Consensus 62 ~~~D~livpGG~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La 108 (188)
T 2fex_A 62 VDIDALVIPGGLSWEKGTAADLGGLVKRFRDRDRLVAGICAAASALG 108 (188)
T ss_dssp TTCSEEEECCBSHHHHTCCCCCHHHHHHHHHTTCEEEEETHHHHHHH
T ss_pred ccCCEEEECCCCcccccccHHHHHHHHHHHHCCCEEEEECHHHHHHH
Confidence 378999999997532 234567888999999999999999999986
No 57
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=94.55 E-value=0.021 Score=56.09 Aligned_cols=47 Identities=21% Similarity=0.279 Sum_probs=39.0
Q ss_pred cCCCEEEECCCCCCC--------------chhHHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 007496 361 KGADGILVPGGFGNR--------------GVQGKILAAKYAREHRIPYLGICLGMQVAVIE 407 (601)
Q Consensus 361 ~~~DGIlvpGGfG~r--------------g~eg~i~aik~are~~iP~LGICLGmQllaie 407 (601)
.++|+|+||||+|.. ..+..+..++.+.++++|+.+||-|-++|+-+
T Consensus 89 ~~~D~livpGG~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~a 149 (232)
T 1vhq_A 89 AELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKI 149 (232)
T ss_dssp GGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGGGGHHHH
T ss_pred ccCCEEEECCCcchHHHHhhhhccccccccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHH
Confidence 579999999998741 13567788999999999999999999998743
No 58
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=94.32 E-value=0.057 Score=52.25 Aligned_cols=45 Identities=18% Similarity=0.113 Sum_probs=38.2
Q ss_pred cCCCEEEECCCCCCC--chhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007496 361 KGADGILVPGGFGNR--GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (601)
Q Consensus 361 ~~~DGIlvpGGfG~r--g~eg~i~aik~are~~iP~LGICLGmQlla 405 (601)
..+|.|+||||.+.+ ..+..+..++.+.++++|+.+||-|-.+|+
T Consensus 73 ~~~D~livpGG~~~~~~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La 119 (212)
T 3efe_A 73 ESKDLLILPGGTTWSEEIHQPILERIGQALKIGTIVAAICGATDALA 119 (212)
T ss_dssp CTTCEEEECCCSCTTSGGGHHHHHHHHHHHHHTCEEEEETHHHHHHH
T ss_pred cCCCEEEECCCCccccccCHHHHHHHHHHHHCCCEEEEEcHHHHHHH
Confidence 389999999998753 345678889999899999999999998886
No 59
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=94.31 E-value=0.016 Score=55.77 Aligned_cols=45 Identities=22% Similarity=0.218 Sum_probs=37.3
Q ss_pred cCCCEEEECCCCCCC----chhHHHHHHHHHHHcCCCEEEEehhH-HHHH
Q 007496 361 KGADGILVPGGFGNR----GVQGKILAAKYAREHRIPYLGICLGM-QVAV 405 (601)
Q Consensus 361 ~~~DGIlvpGGfG~r----g~eg~i~aik~are~~iP~LGICLGm-Qlla 405 (601)
.++|.|+||||++.. ..+..+..++.+.++++|+.+||-|- ++|+
T Consensus 65 ~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~~~lLa 114 (205)
T 2ab0_A 65 GEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLV 114 (205)
T ss_dssp SCCSEEEECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETHHHHHHTT
T ss_pred ccCCEEEECCCcccHHHhccCHHHHHHHHHHHHcCCEEEEECHhHHHHHH
Confidence 679999999997532 23557788888889999999999999 8886
No 60
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=94.30 E-value=0.26 Score=49.28 Aligned_cols=40 Identities=25% Similarity=0.329 Sum_probs=35.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (601)
|-|.|+++ -.|.||=.+|+.++..|..+|+||-.+..||+
T Consensus 5 kvI~v~s~-KGGvGKTT~a~nLA~~La~~G~~VlliD~D~~ 44 (286)
T 2xj4_A 5 RVIVVGNE-KGGAGKSTIAVHLVTALLYGGAKVAVIDLDLR 44 (286)
T ss_dssp EEEEECCS-SSCTTHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred eEEEEEcC-CCCCCHHHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 56777654 58899999999999999999999999999994
No 61
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=94.30 E-value=0.04 Score=53.28 Aligned_cols=48 Identities=6% Similarity=-0.173 Sum_probs=39.6
Q ss_pred hccCCCEEEECCCCCCC-----chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007496 359 LLKGADGILVPGGFGNR-----GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (601)
Q Consensus 359 ~L~~~DGIlvpGGfG~r-----g~eg~i~aik~are~~iP~LGICLGmQllai 406 (601)
.+..+|.|+||||.+.. ..+..+..++.+.++++++.+||-|-.+|+-
T Consensus 71 ~~~~~D~livpGg~~~~~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~~~La~ 123 (209)
T 3er6_A 71 SFDFTNILIIGSIGDPLESLDKIDPALFDWIRELHLKGSKIVAIDTGIFVVAK 123 (209)
T ss_dssp GCSCCSEEEECCCSCHHHHGGGSCHHHHHHHHHHHHTTCEEEEETTHHHHHHH
T ss_pred ccCCCCEEEECCCCCchhhhccCCHHHHHHHHHHHhcCCEEEEEcHHHHHHHH
Confidence 35689999999997642 2456788899999999999999999998863
No 62
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=94.20 E-value=0.098 Score=53.74 Aligned_cols=109 Identities=13% Similarity=0.055 Sum_probs=67.9
Q ss_pred HHHHHHHHHhcCCCCceEEEEEcccCC-CcchHH-HHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHh
Q 007496 282 KEWTSRAEICDGLHEPVRIAMVGKYTG-LSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL 359 (601)
Q Consensus 282 ~~w~~l~~~~~~~~~~v~IalVGkY~~-l~DaY~-SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~ 359 (601)
.-|+.+++.... ...+|++|. +-. ..+.|. .+.++++..|++. +....+... +.. .+| +..+.
T Consensus 43 ~i~~~~v~lagg--~~~~I~~Ip-tAs~~~~~~~~~~~~~f~~lG~~~---v~~L~i~~r--~~a---~~~----~~~~~ 107 (291)
T 3en0_A 43 EILQTFWSRSGG--NDAIIGIIP-SASREPLLIGERYQTIFSDMGVKE---LKVLDIRDR--AQG---DDS----GYRLF 107 (291)
T ss_dssp HHHHHHHHHTTG--GGCEEEEEC-TTCSSHHHHHHHHHHHHHHHCCSE---EEECCCCSG--GGG---GCH----HHHHH
T ss_pred HHHHHHHHHcCC--CCCeEEEEe-CCCCChHHHHHHHHHHHHHcCCCe---eEEEEecCc--ccc---CCH----HHHHH
Confidence 346667766542 247999995 532 233443 4667888888741 112222211 100 111 23356
Q ss_pred ccCCCEEEECCCCCCC-----chhHHHHHHHHHHHcC-CCEEEEehhHHHHH
Q 007496 360 LKGADGILVPGGFGNR-----GVQGKILAAKYAREHR-IPYLGICLGMQVAV 405 (601)
Q Consensus 360 L~~~DGIlvpGGfG~r-----g~eg~i~aik~are~~-iP~LGICLGmQlla 405 (601)
+.++|+|+++||--.+ ...+..++++.+.+++ +|+.|+|.|.-+++
T Consensus 108 l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~~GtSAGA~i~~ 159 (291)
T 3en0_A 108 VEQCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISLAGTSAGAAVMG 159 (291)
T ss_dssp HHHCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEEEEETHHHHTTS
T ss_pred HhcCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEEEEeCHHHHhhh
Confidence 7899999999973222 1246788899998888 99999999998884
No 63
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=94.19 E-value=0.45 Score=51.27 Aligned_cols=41 Identities=27% Similarity=0.473 Sum_probs=36.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHC-CCeeEEeeeccccc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRVTCIKIDPYLN 44 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~-g~~v~~~k~dpyln 44 (601)
+.|.++| .+|.||=.+++.++..|+.+ |.+|..+..|||-+
T Consensus 101 ~vI~ivG--~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r~ 142 (433)
T 2xxa_A 101 AVVLMAG--LQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRP 142 (433)
T ss_dssp EEEEEEC--STTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSST
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCCc
Confidence 5677885 49999999999999999999 99999999999853
No 64
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=94.16 E-value=0.029 Score=54.34 Aligned_cols=45 Identities=24% Similarity=0.349 Sum_probs=38.2
Q ss_pred cCCCEEEECCCCCCC----chhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007496 361 KGADGILVPGGFGNR----GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (601)
Q Consensus 361 ~~~DGIlvpGGfG~r----g~eg~i~aik~are~~iP~LGICLGmQlla 405 (601)
..+|+|+||||.+.. ..+..+..++.+.++++|+.+||-|-++|+
T Consensus 88 ~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~~k~iaaiC~G~~~La 136 (224)
T 1u9c_A 88 HGFDAIFLPGGHGTMFDFPDNETLQYVLQQFAEDGRIIAAVCHGPSGLV 136 (224)
T ss_dssp SSCSEEEECCCTTHHHHSTTCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred hhCCEEEECCCcchHHHhhcCHHHHHHHHHHHHCCCEEEEEChHHHHHH
Confidence 479999999998742 345678889999999999999999999885
No 65
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=94.00 E-value=0.14 Score=48.97 Aligned_cols=39 Identities=26% Similarity=0.370 Sum_probs=35.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (601)
|| |.|+| -.|.||=.+|+.++..|..+|+||-.+..||-
T Consensus 1 mk-I~vs~--kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 39 (254)
T 3kjh_A 1 MK-LAVAG--KGGVGKTTVAAGLIKIMASDYDKIYAVDGDPD 39 (254)
T ss_dssp CE-EEEEC--SSSHHHHHHHHHHHHHHTTTCSCEEEEEECTT
T ss_pred CE-EEEec--CCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 78 45564 89999999999999999999999999999994
No 66
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=93.97 E-value=0.15 Score=58.00 Aligned_cols=96 Identities=13% Similarity=0.103 Sum_probs=61.3
Q ss_pred ceEEEEEcccCCCc-chHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCC-
Q 007496 297 PVRIAMVGKYTGLS-DAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGN- 374 (601)
Q Consensus 297 ~v~IalVGkY~~l~-DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~- 374 (601)
..||||+-.-+... .....+.++|+.+|+.+.+. ... ... .+ | ..|.+ ..-..+|+|+||||...
T Consensus 537 grKVaILvadG~fE~~El~~p~~aL~~aGa~V~vV------sp~-~g~-Gv--D-~t~~~--~~s~~fDAVvlPGG~~~~ 603 (688)
T 3ej6_A 537 TLRVGVLSTTKGGSLDKAKALKEQLEKDGLKVTVI------AEY-LAS-GV--D-QTYSA--ADATAFDAVVVAEGAERV 603 (688)
T ss_dssp TCEEEEECCSSSSHHHHHHHHHHHHHHTTCEEEEE------ESS-CCT-TC--C-EETTT--CCGGGCSEEEECTTCCTT
T ss_pred CCEEEEEccCCCccHHHHHHHHHHHHHCCCEEEEE------eCC-CCC-Cc--c-cCccc--CChhcCcEEEECCCcccc
Confidence 35898873111121 14567899999999987552 111 100 00 0 01111 01246899999999532
Q ss_pred ----------CchhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007496 375 ----------RGVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (601)
Q Consensus 375 ----------rg~eg~i~aik~are~~iP~LGICLGmQlla 405 (601)
+.....+..++.+.++++|+-.||-|-|+|.
T Consensus 604 ~~~~~~~d~Lr~~~~a~~fV~e~~~hgKpIAAIchgp~lL~ 644 (688)
T 3ej6_A 604 FSGKGAMSPLFPAGRPSQILTDGYRWGKPVAAVGSAKKALQ 644 (688)
T ss_dssp TSTTTTCCTTSCTTHHHHHHHHHHHTTCCEEEEGGGHHHHH
T ss_pred cccccchhhhccCHHHHHHHHHHHHcCCEEEEeCccHHHHH
Confidence 2345678899999999999999999999996
No 67
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=93.84 E-value=0.072 Score=51.21 Aligned_cols=47 Identities=19% Similarity=0.075 Sum_probs=39.1
Q ss_pred ccCCCEEEECCCCCCCc-hhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007496 360 LKGADGILVPGGFGNRG-VQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (601)
Q Consensus 360 L~~~DGIlvpGGfG~rg-~eg~i~aik~are~~iP~LGICLGmQllai 406 (601)
...+|.|+||||.+... .+..+..++.+.++++++.+||-|-.+|+-
T Consensus 69 ~~~~D~livpGG~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~~~La~ 116 (202)
T 3gra_A 69 LKELDLLVVCGGLRTPLKYPELDRLLNDCAAHGMALGGLWNGAWFLGR 116 (202)
T ss_dssp GTTCSEEEEECCTTCCSCCTTHHHHHHHHHHHTCEEEEETTHHHHHHH
T ss_pred CCCCCEEEEeCCCchhhccHHHHHHHHHHHhhCCEEEEECHHHHHHHH
Confidence 46799999999976532 167788889888999999999999999863
No 68
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=93.81 E-value=0.11 Score=50.02 Aligned_cols=41 Identities=15% Similarity=0.148 Sum_probs=37.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHC-CCeeEEeeeccc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRVTCIKIDPY 42 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~-g~~v~~~k~dpy 42 (601)
||.|.|+++ -.|.||=.+|+.++..|..+ |.||-.+.+||.
T Consensus 4 ~~vI~v~s~-kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 4 KRVFGFVSA-KGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp CEEEEEEES-STTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CeEEEEECC-CCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 578888876 58999999999999999999 999999999997
No 69
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=93.56 E-value=0.034 Score=52.55 Aligned_cols=46 Identities=17% Similarity=0.150 Sum_probs=37.1
Q ss_pred cCCCEEEECCCCC-CC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007496 361 KGADGILVPGGFG-NR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (601)
Q Consensus 361 ~~~DGIlvpGGfG-~r---g~eg~i~aik~are~~iP~LGICLGmQllai 406 (601)
..+|.|+||||++ .. ..+..+..++.+.++++|+.+||-|-++|+-
T Consensus 66 ~~~D~livpGG~~~~~~~~~~~~~~~~l~~~~~~~k~i~aiC~G~~~La~ 115 (190)
T 4e08_A 66 DKFDVVVLPGGLGGSNAMGESSLVGDLLRSQESGGGLIAAICAAPTVLAK 115 (190)
T ss_dssp CCCSEEEECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHH
T ss_pred ccCCEEEECCCChHHHHhhhCHHHHHHHHHHHHCCCEEEEECHHHHHHHH
Confidence 4689999999953 22 2345778889999999999999999999863
No 70
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=93.53 E-value=0.17 Score=51.60 Aligned_cols=154 Identities=17% Similarity=0.240 Sum_probs=90.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc-------ccCCCCCCCccccceEEEecCCccccCCCCc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY-------LNTDAGTMSPFEHGEVFVLDDGGEVDLDLGN 73 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy-------ln~d~gtmsp~~hgevfv~~dg~e~dldlg~ 73 (601)
+|-|+|||. -.|.||=.+|+.++..|...|.||-.|..||. +++++ +.| -+|+
T Consensus 104 ~kvI~vts~-kgG~GKTtva~nLA~~lA~~G~rVLLID~D~r~~~l~~~~~~~~------~~g---------l~~~---- 163 (299)
T 3cio_A 104 NNILMITGA-TPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHNLFTVSN------EHG---------LSEY---- 163 (299)
T ss_dssp CCEEEEEES-SSSSCHHHHHHHHHHHHHHTTCCEEEEECCTTTCCHHHHTTCCC------SSS---------HHHH----
T ss_pred CeEEEEECC-CCCCChHHHHHHHHHHHHhCCCcEEEEECCCCCccHHHHcCCCC------CCC---------HHHH----
Confidence 467888864 57999999999999999999999999999983 22221 111 0111
Q ss_pred cccccCCCCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEccc-----------chHHHHHHHHHHhcccCCCCCCCCcE
Q 007496 74 YERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPH-----------ITDEIQDWIERVAMIPVDGKEGPVDV 142 (601)
Q Consensus 74 yerf~~~~l~~~~n~t~gkiy~~vi~ker~g~ylg~tvqviph-----------it~~i~~~i~~~~~~~~d~~~~~~dv 142 (601)
|. .. .-..++|.+-.. ..+.|+|- -.+.+++.|+.+. ..+|+
T Consensus 164 ----L~----~~------~~l~~~i~~~~~-----~~l~vl~~g~~~~~~~ell~~~~l~~ll~~l~--------~~yD~ 216 (299)
T 3cio_A 164 ----LA----GK------DELNKVIQHFGK-----GGFDVITRGQVPPNPSELLMRDRMRQLLEWAN--------DHYDL 216 (299)
T ss_dssp ----HT----TS------SCHHHHCEEETT-----TTEEEECCCSCCSCHHHHHTSHHHHHHHHHHH--------HHCSE
T ss_pred ----Cc----CC------CCHHHhhhccCC-----CCEEEEECCCCCCCHHHHhCHHHHHHHHHHHH--------hCCCE
Confidence 00 00 002233332110 22455542 1245666676664 36899
Q ss_pred EEEeeCccccccCcchHHHHHHHHhhHcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhcCCCcccEEEEec
Q 007496 143 CVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRS 218 (601)
Q Consensus 143 ~i~e~ggtvgdies~pf~ea~rq~~~~~g~~n~~~ih~~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~ 218 (601)
|||+..+..+-- +|. .+... - ...+++.- .+....+-++.+++.|+..|+..-++|+-.
T Consensus 217 VIIDtpp~~~~~------d~~-~l~~~---a-----d~vilV~~--~~~~~~~~~~~~~~~l~~~~~~~~GvVlN~ 275 (299)
T 3cio_A 217 VIVDTPPMLAVS------DAA-VVGRS---V-----GTSLLVAR--FGLNTAKEVSLSMQRLEQAGVNIKGAILNG 275 (299)
T ss_dssp EEEECCCTTTCT------HHH-HHGGG---C-----SEEEEEEE--TTTSCTTHHHHHHHHHHHTTCCCCCEEEEE
T ss_pred EEEcCCCCchhH------HHH-HHHHH---C-----CEEEEEEc--CCCChHHHHHHHHHHHHhCCCCeEEEEEeC
Confidence 999999876521 111 11111 1 12233322 355555677888999999999888887743
No 71
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=93.48 E-value=0.1 Score=55.04 Aligned_cols=41 Identities=22% Similarity=0.144 Sum_probs=35.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (601)
+|-|||||==. ++||+.++..+-+.|+.+|++|..++.-.+
T Consensus 169 ~~ri~v~GTDt-~vGKt~t~~~L~~~l~~~G~~v~~v~tgqt 209 (350)
T 2g0t_A 169 IKVVGVFGTDC-VVGKRTTAVQLWERALEKGIKAGFLATGQT 209 (350)
T ss_dssp SEEEEEEESSS-SSSHHHHHHHHHHHHHHTTCCEEEEECSHH
T ss_pred ceEEEEecCCC-CccCccHHHHHHHHHHhcCCeEEEEccCce
Confidence 36789998666 599999999999999999999999887665
No 72
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=93.21 E-value=0.031 Score=55.25 Aligned_cols=45 Identities=11% Similarity=0.056 Sum_probs=37.7
Q ss_pred cCCCEEEECCCCCC----CchhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007496 361 KGADGILVPGGFGN----RGVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (601)
Q Consensus 361 ~~~DGIlvpGGfG~----rg~eg~i~aik~are~~iP~LGICLGmQlla 405 (601)
.++|+|+||||.|. +..+..+..++.+.++++|+.+||-|-.+|+
T Consensus 97 ~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La 145 (243)
T 1rw7_A 97 DDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPAIFD 145 (243)
T ss_dssp GGEEEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred hhCcEEEECCCCCchhhcccCHHHHHHHHHHHHcCCEEEEECCCHHHHH
Confidence 46899999999874 2345678889999999999999999998774
No 73
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=93.02 E-value=0.082 Score=52.03 Aligned_cols=46 Identities=17% Similarity=0.106 Sum_probs=38.6
Q ss_pred ccCCCEEEECCCCCCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007496 360 LKGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (601)
Q Consensus 360 L~~~DGIlvpGGfG~r---g~eg~i~aik~are~~iP~LGICLGmQlla 405 (601)
+..+|.|+||||+|.. ..+..+..++.+.++++++.+||-|-.+|+
T Consensus 63 ~~~~D~livpGG~g~~~~~~~~~l~~~lr~~~~~g~~v~aiC~G~~~La 111 (231)
T 3noq_A 63 CPPLDVICIPGGTGVGALMEDPQALAFIRQQAARARYVTSVSTGSLVLG 111 (231)
T ss_dssp CCCCSEEEECCSTTHHHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHH
T ss_pred CCcCCEEEECCCCChhhhccCHHHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 4579999999998753 235677888888899999999999998886
No 74
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=92.98 E-value=0.042 Score=54.99 Aligned_cols=45 Identities=16% Similarity=0.093 Sum_probs=38.2
Q ss_pred cCCCEEEECCCCCC----CchhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007496 361 KGADGILVPGGFGN----RGVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (601)
Q Consensus 361 ~~~DGIlvpGGfG~----rg~eg~i~aik~are~~iP~LGICLGmQlla 405 (601)
.++|+|+||||+|. +..+.....++.+.++++|+.+||-|-.+|+
T Consensus 104 ~~yD~l~ipGG~g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp~~La 152 (247)
T 3n7t_A 104 HDYGLMFVCGGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPAMLP 152 (247)
T ss_dssp GGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGG
T ss_pred hhCCEEEEeCCCchhhhcccCHHHHHHHHHHHHcCCEEEEEChHHHHHH
Confidence 46899999999975 2345678889999999999999999998874
No 75
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=92.93 E-value=0.49 Score=51.34 Aligned_cols=40 Identities=23% Similarity=0.377 Sum_probs=36.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (601)
+.|+++|- +|.||=.+++.++..|+.+|.+|..+..|||-
T Consensus 101 ~vIlivG~--~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R 140 (443)
T 3dm5_A 101 TILLMVGI--QGSGKTTTVAKLARYFQKRGYKVGVVCSDTWR 140 (443)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHTTTCCEEEEECCCSS
T ss_pred eEEEEECc--CCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 46777775 99999999999999999999999999999973
No 76
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=92.84 E-value=1.1 Score=48.54 Aligned_cols=39 Identities=28% Similarity=0.456 Sum_probs=35.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (601)
+.|+++|. +|.||=.+++.++.+|+.+|.+|..+-.|+|
T Consensus 98 ~vI~lvG~--~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~ 136 (433)
T 3kl4_A 98 FIIMLVGV--QGSGKTTTAGKLAYFYKKRGYKVGLVAADVY 136 (433)
T ss_dssp EEEEECCC--TTSCHHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEecCcc
Confidence 56788875 8999999999999999999999999999976
No 77
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=92.69 E-value=0.047 Score=54.45 Aligned_cols=45 Identities=13% Similarity=0.049 Sum_probs=38.2
Q ss_pred cCCCEEEECCCCCC----CchhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007496 361 KGADGILVPGGFGN----RGVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (601)
Q Consensus 361 ~~~DGIlvpGGfG~----rg~eg~i~aik~are~~iP~LGICLGmQlla 405 (601)
.++|+|+||||.|. +..+.....++.+.++++|+.+||-|-.+|+
T Consensus 97 ~~yD~l~vpGG~~~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~G~~~La 145 (244)
T 3kkl_A 97 SDYKVFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFD 145 (244)
T ss_dssp GGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred hhCCEEEEcCCCchhhhcccCHHHHHHHHHHHHcCCEEEEECHHHHHHH
Confidence 46899999999875 2346678889999999999999999998884
No 78
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=92.61 E-value=0.11 Score=59.65 Aligned_cols=100 Identities=15% Similarity=0.069 Sum_probs=61.1
Q ss_pred ceEEEEEcccCCCc-chHHHHHHHHHHccccceeEEEEEeecCCCcccc---cccCCchhhhHHHHhccCCCEEEECCCC
Q 007496 297 PVRIAMVGKYTGLS-DAYLSILKALLHASVDLRKKLVIDWIPACDLEDA---TEKENPDAYKAAWKLLKGADGILVPGGF 372 (601)
Q Consensus 297 ~v~IalVGkY~~l~-DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~---~~~~~p~~y~~a~~~L~~~DGIlvpGGf 372 (601)
..||+|+= ...+. ....+++++|+.+|+.+.+ .-.....+... .+..|. .|.+ .....+|+|+||||
T Consensus 600 grKVaILl-aDGfEe~El~~pvdaLr~AG~~V~v----VS~~~g~V~gs~G~~V~aD~-t~~~--v~s~~fDALVVPGG- 670 (753)
T 3ttv_A 600 GRVVAILL-NDEVRSADLLAILKALKAKGVHAKL----LYSRMGEVTADDGTVLPIAA-TFAG--APSLTVDAVIVPCG- 670 (753)
T ss_dssp TCEEEEEC-CTTCCHHHHHHHHHHHHHHTCEEEE----EESSSSEEECTTSCEEECCE-ETTT--SCGGGCSEEEECCS-
T ss_pred CCEEEEEe-cCCCCHHHHHHHHHHHHHCCCEEEE----EEcCCCeEEeCCCCEEeccc-chhh--CCCcCCCEEEECCC-
Confidence 35888872 32232 2456889999999987543 22111111100 000000 0110 01135899999999
Q ss_pred CCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007496 373 GNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (601)
Q Consensus 373 G~r---g~eg~i~aik~are~~iP~LGICLGmQlla 405 (601)
|.. ..+..+..++.+.++++|+-+||-|-++|+
T Consensus 671 g~~~Lr~d~~vl~~Vre~~~~gKpIAAIC~Gp~lLa 706 (753)
T 3ttv_A 671 NIADIADNGDANYYLMEAYKHLKPIALAGDARKFKA 706 (753)
T ss_dssp CGGGTTTCHHHHHHHHHHHHTTCCEEEEGGGGGGGG
T ss_pred ChHHhhhCHHHHHHHHHHHhcCCeEEEECchHHHHH
Confidence 643 345678889999999999999999999985
No 79
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=92.34 E-value=0.27 Score=56.06 Aligned_cols=96 Identities=14% Similarity=0.036 Sum_probs=60.9
Q ss_pred ceEEEEEcc--cCCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCC-C
Q 007496 297 PVRIAMVGK--YTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF-G 373 (601)
Q Consensus 297 ~v~IalVGk--Y~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGf-G 373 (601)
..||+|+-. -+.-......+.++|+.+|+.+.+. -....+--+. .|.+ .....+|+|+||||. |
T Consensus 529 g~kVaIL~a~~dGfe~~E~~~~~~~L~~aG~~V~vV----s~~~g~~vD~-------t~~~--~~s~~fDAVvlPGG~~g 595 (688)
T 2iuf_A 529 GLKVGLLASVNKPASIAQGAKLQVALSSVGVDVVVV----AERXANNVDE-------TYSA--SDAVQFDAVVVADGAEG 595 (688)
T ss_dssp TCEEEEECCTTCHHHHHHHHHHHHHHGGGTCEEEEE----ESSCCTTCCE-------ESTT--CCGGGCSEEEECTTCGG
T ss_pred CCEEEEEecCCCCCcHHHHHHHHHHHHHCCCEEEEE----eccCCccccc-------chhc--CCccccCeEEecCCCcc
Confidence 358998842 1111123467889999999987552 1111110000 1111 013578999999994 4
Q ss_pred ----------------C---CchhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007496 374 ----------------N---RGVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (601)
Q Consensus 374 ----------------~---rg~eg~i~aik~are~~iP~LGICLGmQlla 405 (601)
. +.....+..++.+.+.++|+-.||-|-++|.
T Consensus 596 ~~~~~~~~~~~~~~~~~~~L~~~~~~~~~v~~~~~~gKpIaAIc~ap~vL~ 646 (688)
T 2iuf_A 596 LFGADSFTVEPSAGSGASTLYPAGRPLNILLDAFRFGKTVGALGSGSDALE 646 (688)
T ss_dssp GCCTTTTTCCCCTTSCCCSSSCTTHHHHHHHHHHHHTCEEEEEGGGHHHHH
T ss_pred cccccccccccccccchhhcccChHHHHHHHHHHHcCCEEEEECchHHHHH
Confidence 1 1235678889999999999999999999885
No 80
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=91.99 E-value=0.11 Score=54.71 Aligned_cols=46 Identities=22% Similarity=0.322 Sum_probs=38.4
Q ss_pred cCCCEEEECCCCCCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007496 361 KGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (601)
Q Consensus 361 ~~~DGIlvpGGfG~r---g~eg~i~aik~are~~iP~LGICLGmQllai 406 (601)
..+|.|+||||+|.. ..+..+..++.+.++++|+.+||-|-++|+-
T Consensus 281 ~~~D~livpGg~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~g~~~La~ 329 (396)
T 3uk7_A 281 SSYDALVIPGGRAPEYLALNEHVLNIVKEFMNSEKPVASICHGQQILAA 329 (396)
T ss_dssp GGCSEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEEGGGHHHHHH
T ss_pred ccCCEEEECCCcchhhhccCHHHHHHHHHHHHCCCEEEEEchHHHHHHH
Confidence 578999999998642 2356778899999999999999999999863
No 81
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=91.57 E-value=0.08 Score=51.29 Aligned_cols=45 Identities=20% Similarity=0.253 Sum_probs=37.2
Q ss_pred cCCCEEEECCCCCCCc---hhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007496 361 KGADGILVPGGFGNRG---VQGKILAAKYAREHRIPYLGICLGMQVAV 405 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg---~eg~i~aik~are~~iP~LGICLGmQlla 405 (601)
..+|.|+||||+|... .+..+..++.+.++++++.+||-|-.+|+
T Consensus 64 ~~~D~livpGG~~~~~~~~~~~~~~~l~~~~~~~k~iaaiC~G~~~La 111 (211)
T 3mgk_A 64 NIEKILFVPGGSGTREKVNDDNFINFIGNMVKESKYIISVCTGSALLS 111 (211)
T ss_dssp SSEEEEEECCSTHHHHHTTCHHHHHHHHHHHHHCSEEEECTTHHHHHH
T ss_pred CCCCEEEECCCcchhhhcCCHHHHHHHHHHHHcCCEEEEEchHHHHHH
Confidence 4579999999986532 34577888888889999999999999886
No 82
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=91.43 E-value=0.26 Score=49.56 Aligned_cols=43 Identities=33% Similarity=0.451 Sum_probs=39.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccC
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNT 45 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~ 45 (601)
||.|.|+ | -.|.||=.+|+.++..|..+|+||-.+..||..|.
T Consensus 41 ~~vI~v~-~-KGGvGKTT~a~nLA~~La~~G~~VlliD~D~~~~~ 83 (307)
T 3end_A 41 AKVFAVY-G-KGGIGKSTTSSNLSAAFSILGKRVLQIGCDPKHDS 83 (307)
T ss_dssp CEEEEEE-C-STTSSHHHHHHHHHHHHHHTTCCEEEEEESSSCCT
T ss_pred ceEEEEE-C-CCCccHHHHHHHHHHHHHHCCCeEEEEeCCCCCCH
Confidence 5789999 7 99999999999999999999999999999996443
No 83
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=90.98 E-value=0.15 Score=53.77 Aligned_cols=46 Identities=22% Similarity=0.340 Sum_probs=38.4
Q ss_pred cCCCEEEECCCCCCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHHH
Q 007496 361 KGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (601)
Q Consensus 361 ~~~DGIlvpGGfG~r---g~eg~i~aik~are~~iP~LGICLGmQllai 406 (601)
..+|.|+||||+|.. ..+..+..++.+.++++|+.+||-|-++|+-
T Consensus 88 ~~~D~livpGG~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~La~ 136 (396)
T 3uk7_A 88 SKYDGLVIPGGRAPEYLALTASVVELVKEFSRSGKPIASICHGQLILAA 136 (396)
T ss_dssp GGCSEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHHH
T ss_pred ccCCEEEECCCcchhhcccCHHHHHHHHHHHHcCCEEEEECchHHHHHh
Confidence 578999999997642 2356778889999999999999999999874
No 84
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=90.87 E-value=0.081 Score=54.03 Aligned_cols=46 Identities=26% Similarity=0.385 Sum_probs=38.5
Q ss_pred ccCCCEEEECCCCCCC-c---hhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007496 360 LKGADGILVPGGFGNR-G---VQGKILAAKYAREHRIPYLGICLGMQVAV 405 (601)
Q Consensus 360 L~~~DGIlvpGGfG~r-g---~eg~i~aik~are~~iP~LGICLGmQlla 405 (601)
..++|+||||||.|.. . .+..+..++++.++++|+.+||-|-.+|+
T Consensus 143 ~~~yD~livPGG~g~~~~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp~~La 192 (291)
T 1n57_A 143 DSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLCHGPAAFL 192 (291)
T ss_dssp TCSEEEEEECCSGGGGSSGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGG
T ss_pred cccCCEEEecCCcchhhhhhhCHHHHHHHHHHHHcCCEEEEECccHHHHH
Confidence 4689999999998754 2 35678889999999999999999998764
No 85
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=90.83 E-value=0.069 Score=51.43 Aligned_cols=98 Identities=14% Similarity=0.187 Sum_probs=58.6
Q ss_pred eEEEEEcccCCCcc-hHHHHHHHHHHccccceeEEEEEeecC-CCcccc-c--ccCCchhhhHHHHhc--cCCCEEEECC
Q 007496 298 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPA-CDLEDA-T--EKENPDAYKAAWKLL--KGADGILVPG 370 (601)
Q Consensus 298 v~IalVGkY~~l~D-aY~SIi~aL~~ag~~~~vkv~i~wi~s-~~le~~-~--~~~~p~~y~~a~~~L--~~~DGIlvpG 370 (601)
.||+++- +..+.+ .+....+.|+.+++++.+ ...+. ..+... . +..+. .+ +.+ ..+|.|+|||
T Consensus 10 ~~v~ill-~~g~~~~e~~~~~~~l~~ag~~v~~----vs~~g~~~v~~~~G~~v~~d~-~l----~~~~~~~~D~livpG 79 (208)
T 3ot1_A 10 KRILVPV-AHGSEEMETVIIVDTLVRAGFQVTM----AAVGDKLQVQGSRGVWLTAEQ-TL----EACSAEAFDALALPG 79 (208)
T ss_dssp CEEEEEE-CTTCCHHHHHHHHHHHHHTTCEEEE----EESSSCSEEECTTSCEEECSE-EG----GGCCGGGCSEEEECC
T ss_pred CeEEEEE-CCCCcHHHHHHHHHHHHHCCCEEEE----EEcCCCcceecCCCcEEeCCC-CH----HHCCCcCCCEEEECC
Confidence 4788773 544432 334677889999876533 22221 111100 0 00000 01 222 4789999999
Q ss_pred CCCCC----chhHHHHHHHHHHHcCCCEEEEehhH-HHHH
Q 007496 371 GFGNR----GVQGKILAAKYAREHRIPYLGICLGM-QVAV 405 (601)
Q Consensus 371 GfG~r----g~eg~i~aik~are~~iP~LGICLGm-Qlla 405 (601)
|.+.. ..+..+..++.+.++++|+.+||-|- .+|+
T Consensus 80 G~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~a~~La 119 (208)
T 3ot1_A 80 GVGGAQAFADSTALLALIDAFSQQGKLVAAICATPALVFA 119 (208)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHTTT
T ss_pred CchHHHHHhhCHHHHHHHHHHHHcCCEEEEEChhHHHHHH
Confidence 97422 23567788999999999999999998 7775
No 86
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=90.28 E-value=0.17 Score=50.63 Aligned_cols=44 Identities=14% Similarity=0.171 Sum_probs=36.7
Q ss_pred CCCEEEECCCC-CCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007496 362 GADGILVPGGF-GNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (601)
Q Consensus 362 ~~DGIlvpGGf-G~r---g~eg~i~aik~are~~iP~LGICLGmQlla 405 (601)
.+|.|+||||. |.. ..+..+..++.+.++++++.+||-|-.+|+
T Consensus 84 ~yD~liVPGG~~g~~~l~~~~~l~~~Lr~~~~~gk~IaaICtG~~lLa 131 (253)
T 3ewn_A 84 DLTVLFAPGGTDGTLAAASDAETLAFMADRGARAKYITSVCSGSLILG 131 (253)
T ss_dssp SCSEEEECCBSHHHHHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHH
T ss_pred CCCEEEECCCccchhhhccCHHHHHHHHHHHHcCCEEEEEChHHHHHH
Confidence 46999999998 642 245677888888889999999999998886
No 87
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=90.16 E-value=0.17 Score=53.52 Aligned_cols=101 Identities=15% Similarity=0.197 Sum_probs=60.1
Q ss_pred ceEEEEEcccCCCcc-hHHHHHHHHHHccccceeEEEEEeecCCC-cccc-cc-cCCchhhhHHHHhc--cCCCEEEECC
Q 007496 297 PVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACD-LEDA-TE-KENPDAYKAAWKLL--KGADGILVPG 370 (601)
Q Consensus 297 ~v~IalVGkY~~l~D-aY~SIi~aL~~ag~~~~vkv~i~wi~s~~-le~~-~~-~~~p~~y~~a~~~L--~~~DGIlvpG 370 (601)
..+|+++- |..+.+ .+....+.|+.+|+++.+ .-.+... +... .. .-.++. ..+.+ ..+|.|+|||
T Consensus 10 mkkV~ILl-~dgf~~~El~~p~dvL~~Ag~~v~v----vS~~~g~~V~ss~G~~~i~~d~---~l~~v~~~~~DaLiVPG 81 (365)
T 3fse_A 10 KKKVAILI-EQAVEDTEFIIPCNGLKQAGFEVVV----LGSRMNEKYKGKRGRLSTQADG---TTTEAIASEFDAVVIPG 81 (365)
T ss_dssp -CEEEEEC-CTTBCHHHHHHHHHHHHHTTCEEEE----EESSSSCCEECTTSCCEECCSE---ETTTCCGGGCSEEEECC
T ss_pred ceEEEEEE-CCCCcHHHHHHHHHHHHHCCCEEEE----EECCCCceeecCCCceEEeCCC---CHhhCCCcCCCEEEEEC
Confidence 45788883 554432 234567889998876533 2211111 1000 00 000000 00122 3689999999
Q ss_pred CCCCC---chhHHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007496 371 GFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (601)
Q Consensus 371 GfG~r---g~eg~i~aik~are~~iP~LGICLGmQlla 405 (601)
|+|.. ..+..+..++.+.++++|+.+||-|-.+|+
T Consensus 82 G~g~~~l~~~~~l~~~Lr~~~~~gk~IaAIC~G~~lLA 119 (365)
T 3fse_A 82 GMAPDKMRRNPNTVRFVQEAMEQGKLVAAVCHGPQVLI 119 (365)
T ss_dssp BTHHHHHTTCHHHHHHHHHHHHTTCEEEEETTTHHHHH
T ss_pred CcchhhccCCHHHHHHHHHHHHCCCEEEEECHHHHHHH
Confidence 98642 235677889999999999999999999986
No 88
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=89.75 E-value=2.1 Score=44.56 Aligned_cols=44 Identities=20% Similarity=0.302 Sum_probs=39.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccC
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNT 45 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~ 45 (601)
||.|.|++| -.|.||=.+|+.++..|..+|.||-.+-+||+-|+
T Consensus 143 ~kvIav~s~-KGGvGKTT~a~nLA~~La~~g~rVlliD~D~~~~l 186 (373)
T 3fkq_A 143 SSVVIFTSP-CGGVGTSTVAAACAIAHANMGKKVFYLNIEQCGTT 186 (373)
T ss_dssp CEEEEEECS-STTSSHHHHHHHHHHHHHHHTCCEEEEECCTTCCH
T ss_pred ceEEEEECC-CCCChHHHHHHHHHHHHHhCCCCEEEEECCCCCCH
Confidence 578888887 68999999999999999999999999999976554
No 89
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=89.68 E-value=2.8 Score=45.11 Aligned_cols=40 Identities=25% Similarity=0.361 Sum_probs=35.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (601)
+.|.++| . +|-||=.+++.++.+|+..|.+|..+..|+|-
T Consensus 99 ~vi~i~G-~-~GsGKTT~~~~LA~~l~~~g~~Vllvd~D~~r 138 (425)
T 2ffh_A 99 NLWFLVG-L-QGSGKTTTAAKLALYYKGKGRRPLLVAADTQR 138 (425)
T ss_dssp EEEEEEC-C-TTSSHHHHHHHHHHHHHTTTCCEEEEECCSSC
T ss_pred eEEEEEC-C-CCCCHHHHHHHHHHHHHHcCCeEEEeeccccC
Confidence 4677775 3 99999999999999999999999999999874
No 90
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=88.83 E-value=0.55 Score=45.40 Aligned_cols=40 Identities=25% Similarity=0.420 Sum_probs=36.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (601)
+|.|.|+++ -.|.||=.+|+.++..|..+|+||-.+..||
T Consensus 2 ~~vi~v~s~-kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSG-KGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECC-CCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 478888875 5899999999999999999999999999999
No 91
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=88.79 E-value=0.52 Score=44.41 Aligned_cols=44 Identities=25% Similarity=0.250 Sum_probs=36.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc-ccCC
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY-LNTD 46 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy-ln~d 46 (601)
|+.|.++| -||-||-.+...+-..|+.+|++|..+|.||- .++|
T Consensus 6 ~~~i~i~G--~sGsGKTTl~~~l~~~l~~~g~~v~~i~~~~~~~~id 50 (174)
T 1np6_A 6 IPLLAFAA--WSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVD 50 (174)
T ss_dssp CCEEEEEC--CTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-----
T ss_pred ceEEEEEe--CCCCCHHHHHHHHHHhccccCCceeEEeeCCCccccC
Confidence 46788888 79999999999999999999999999999983 3555
No 92
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=88.69 E-value=0.58 Score=44.65 Aligned_cols=41 Identities=22% Similarity=0.327 Sum_probs=37.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (601)
+|.|.|+++ -.|.||=.+|+.++..|..+|+||-.+..||.
T Consensus 2 ~~~i~v~s~-kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 42 (237)
T 1g3q_A 2 GRIISIVSG-KGGTGKTTVTANLSVALGDRGRKVLAVDGDLT 42 (237)
T ss_dssp CEEEEEECS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred ceEEEEecC-CCCCCHHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 488888875 57999999999999999999999999999994
No 93
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=88.60 E-value=0.65 Score=53.25 Aligned_cols=102 Identities=15% Similarity=0.048 Sum_probs=60.6
Q ss_pred eEEEEEcccCCCcc-hHHHHHHHHHHccccceeEEEEEeecCCCcccc---cccCCchhhhHHHHhccCCCEEEECCCCC
Q 007496 298 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLEDA---TEKENPDAYKAAWKLLKGADGILVPGGFG 373 (601)
Q Consensus 298 v~IalVGkY~~l~D-aY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~---~~~~~p~~y~~a~~~L~~~DGIlvpGGfG 373 (601)
.||+|+- +....+ ......++|+.+|+++.+ .......+... .+..+. .+.+ -....+|+|+||||.+
T Consensus 535 rkVaILl-~dGfe~~El~~p~dvL~~AG~~V~i----vS~~gg~V~ss~G~~v~~d~-~l~~--v~~~~yDaViVPGG~~ 606 (715)
T 1sy7_A 535 RRVAIII-ADGYDNVAYDAAYAAISANQAIPLV----IGPRRSKVTAANGSTVQPHH-HLEG--FRSTMVDAIFIPGGAK 606 (715)
T ss_dssp CEEEEEC-CTTBCHHHHHHHHHHHHHTTCEEEE----EESCSSCEEBTTSCEECCSE-ETTT--CCGGGSSEEEECCCHH
T ss_pred CEEEEEE-cCCCCHHHHHHHHHHHHhcCCEEEE----EECCCCceecCCCceEeccc-cccc--CCcccCCEEEEcCCcc
Confidence 5899883 543332 234678899999876533 22221111100 000000 0100 0124689999999953
Q ss_pred CC----chhHHHHHHHHHHHcCCCEEEEehhHHHHHHH
Q 007496 374 NR----GVQGKILAAKYAREHRIPYLGICLGMQVAVIE 407 (601)
Q Consensus 374 ~r----g~eg~i~aik~are~~iP~LGICLGmQllaie 407 (601)
.. .....+..++.+.++++|+.+||-|-.+|+-+
T Consensus 607 ~~~~l~~~~~l~~~Lr~~~~~gK~IaAIC~G~~lLA~A 644 (715)
T 1sy7_A 607 AAETLSKNGRALHWIREAFGHLKAIGATGEAVDLVAKA 644 (715)
T ss_dssp HHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHHHHH
T ss_pred cHhhhccCHHHHHHHHHHHhCCCEEEEECHHHHHHHHc
Confidence 22 23457788999999999999999999999754
No 94
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=88.49 E-value=0.36 Score=53.51 Aligned_cols=41 Identities=29% Similarity=0.426 Sum_probs=33.5
Q ss_pred EEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccC
Q 007496 4 VLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNT 45 (601)
Q Consensus 4 i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~ 45 (601)
|+|++| -.|.||-.+|++++..|..+|.+|-.+-.||.-|.
T Consensus 329 ~~~~~~-~~g~Gktt~a~~lA~~l~~~g~~vllvD~Dp~~~l 369 (589)
T 1ihu_A 329 LIMLMG-KGGVGKTTMAAAIAVRLADMGFDVHLTTSDPAAHL 369 (589)
T ss_dssp EEEEEC-STTSSHHHHHHHHHHHHHHTTCCEEEEESCCC---
T ss_pred EEEEec-CCCCChhhHHHHHHHHHHHCCCcEEEEeCCCcccH
Confidence 444444 57999999999999999999999999999997554
No 95
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=87.02 E-value=0.71 Score=45.19 Aligned_cols=42 Identities=24% Similarity=0.305 Sum_probs=37.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln 44 (601)
||.|.|+++ -.|.||=.+|+.++..|. +|+||-.+.+||.-|
T Consensus 27 ~~vI~v~s~-kGGvGKTT~a~~LA~~la-~g~~VlliD~D~~~~ 68 (267)
T 3k9g_A 27 PKIITIASI-KGGVGKSTSAIILATLLS-KNNKVLLIDMDTQAS 68 (267)
T ss_dssp CEEEEECCS-SSSSCHHHHHHHHHHHHT-TTSCEEEEEECTTCH
T ss_pred CeEEEEEeC-CCCchHHHHHHHHHHHHH-CCCCEEEEECCCCCC
Confidence 467777766 589999999999999999 999999999999754
No 96
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=86.09 E-value=0.91 Score=45.09 Aligned_cols=42 Identities=26% Similarity=0.449 Sum_probs=38.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln 44 (601)
||-|.|+ | =-|.||=.+|+.++..|..+|+||-.+-.||.-|
T Consensus 2 MkvIavs-~-KGGvGKTT~a~nLA~~La~~G~rVlliD~D~q~~ 43 (289)
T 2afh_E 2 MRQCAIY-G-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPKAD 43 (289)
T ss_dssp CEEEEEE-E-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSSSC
T ss_pred ceEEEEe-C-CCcCcHHHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 7888887 5 8899999999999999999999999999999755
No 97
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=86.08 E-value=0.84 Score=44.54 Aligned_cols=42 Identities=29% Similarity=0.470 Sum_probs=38.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln 44 (601)
||-|.|+ | =-|.||=.+|+.++..|..+|+||-.+-.||.-|
T Consensus 1 M~vI~vs-~-KGGvGKTT~a~nLA~~la~~G~~VlliD~D~q~~ 42 (269)
T 1cp2_A 1 MRQVAIY-G-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKAD 42 (269)
T ss_dssp CEEEEEE-E-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTTSC
T ss_pred CcEEEEe-c-CCCCcHHHHHHHHHHHHHHCCCcEEEEcCCCCCC
Confidence 7888886 5 8899999999999999999999999999999754
No 98
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=84.80 E-value=0.75 Score=47.12 Aligned_cols=41 Identities=22% Similarity=0.426 Sum_probs=37.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (601)
||-|+|++| -.|.||=.+|++++..|..+|.||-.+-.||-
T Consensus 13 m~~i~v~sg-KGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 53 (324)
T 3zq6_A 13 KTTFVFIGG-KGGVGKTTISAATALWMARSGKKTLVISTDPA 53 (324)
T ss_dssp BCEEEEEEE-STTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CeEEEEEeC-CCCchHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 567777777 78999999999999999999999999999984
No 99
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=84.56 E-value=1.3 Score=45.56 Aligned_cols=44 Identities=32% Similarity=0.440 Sum_probs=39.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCC
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTD 46 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d 46 (601)
+|.|-|+| ==|+||=.||+.|+..|..+|+||-.|=+||+.|.-
T Consensus 48 aKVIAIaG--KGGVGKTTtavNLA~aLA~~GkkVllID~Dpq~~s~ 91 (314)
T 3fwy_A 48 AKVFAVYG--KGGIGKSTTSSNLSAAFSILGKRVLQIGCDPKHDST 91 (314)
T ss_dssp CEEEEEEC--STTSSHHHHHHHHHHHHHHTTCCEEEEEESSSCCTT
T ss_pred ceEEEEEC--CCccCHHHHHHHHHHHHHHCCCeEEEEecCCCCccc
Confidence 47889995 669999999999999999999999999999988743
No 100
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=82.67 E-value=1.2 Score=43.42 Aligned_cols=43 Identities=28% Similarity=0.444 Sum_probs=37.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln 44 (601)
||-|.|+++ -.|.||=.+|+.++..|..+|+||-.+.+||.-|
T Consensus 6 ~~vI~v~s~-kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~~~ 48 (257)
T 1wcv_1 6 VRRIALANQ-KGGVGKTTTAINLAAYLARLGKRVLLVDLDPQGN 48 (257)
T ss_dssp CCEEEECCS-SCCHHHHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred CEEEEEEeC-CCCchHHHHHHHHHHHHHHCCCCEEEEECCCCcC
Confidence 577888764 5789999999999999999999999999999644
No 101
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=81.20 E-value=1.5 Score=45.51 Aligned_cols=41 Identities=32% Similarity=0.536 Sum_probs=36.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (601)
||-|+|++| -.|.||=.+|++++..|..+|.||-.+-.||-
T Consensus 25 ~~~i~v~sg-KGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 25 GTKYIMFGG-KGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp SCEEEEEEC-SSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred CCEEEEEeC-CCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 466777777 78999999999999999999999999999984
No 102
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=81.11 E-value=1.5 Score=45.57 Aligned_cols=45 Identities=22% Similarity=0.366 Sum_probs=41.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCC
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTD 46 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d 46 (601)
||.|.|+++ --|.||=.+|+.+|..|..+|.||-.|-+||.-|.-
T Consensus 1 MkvIav~s~-KGGvGKTT~a~nLA~~LA~~G~rVLlID~D~q~~~~ 45 (361)
T 3pg5_A 1 MRTISFFNN-KGGVGKTTLSTNVAHYFALQGKRVLYVDCDPQCNAT 45 (361)
T ss_dssp CEEEEBCCS-SCCHHHHHHHHHHHHHHHHTTCCEEEEECCTTCTTH
T ss_pred CeEEEEEcC-CCCCcHHHHHHHHHHHHHhCCCcEEEEEcCCCCChh
Confidence 888999877 789999999999999999999999999999986653
No 103
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=80.95 E-value=1.1 Score=40.81 Aligned_cols=36 Identities=31% Similarity=0.458 Sum_probs=32.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|++|+|+|. +|-||...|..|...|...|+++..+-
T Consensus 1 M~~I~i~G~--~GsGKsT~~~~L~~~l~~~g~~~~~~~ 36 (194)
T 1nks_A 1 MKIGIVTGI--PGVGKSTVLAKVKEILDNQGINNKIIN 36 (194)
T ss_dssp CEEEEEEEC--TTSCHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CeEEEEECC--CCCCHHHHHHHHHHHHHhcCceEEEEE
Confidence 899999995 899999999999999999999887763
No 104
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=79.26 E-value=0.65 Score=44.21 Aligned_cols=45 Identities=22% Similarity=0.064 Sum_probs=31.4
Q ss_pred ccCCCEEEECCCCC-CC---chhHHHHHHHHHHH-cCCCEEEEehhHHHH
Q 007496 360 LKGADGILVPGGFG-NR---GVQGKILAAKYARE-HRIPYLGICLGMQVA 404 (601)
Q Consensus 360 L~~~DGIlvpGGfG-~r---g~eg~i~aik~are-~~iP~LGICLGmQll 404 (601)
..++|.|+||||.+ .. ..+..+..++.+.+ .++|+-.||-|..++
T Consensus 71 ~~~yD~lvvPGG~~~~~~l~~~~~l~~~l~~~~~~~~k~iaaiC~g~~l~ 120 (194)
T 4gdh_A 71 AKQYDIAIIPGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGTLTA 120 (194)
T ss_dssp HHHCSEEEECCCHHHHHHHHTCHHHHHHHHHHTTCTTCEEEEEGGGGHHH
T ss_pred cccCCEEEECCCchhHhHhhhCHHHHHHHHHhhhcCCceEEeecccccch
Confidence 45689999999954 22 23455666776543 478999999997443
No 105
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=78.79 E-value=2.4 Score=40.00 Aligned_cols=40 Identities=30% Similarity=0.355 Sum_probs=34.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (601)
+|-|+||++ =.|.||=.+|+.++..|..+|+||-. +||-.
T Consensus 1 ~k~I~v~s~-kgGvGKTt~a~nLa~~la~~G~rVll--~dp~~ 40 (224)
T 1byi_A 1 SKRYFVTGT-DTEVGKTVASCALLQAAKAAGYRTAG--YKPVA 40 (224)
T ss_dssp CEEEEEEES-STTSCHHHHHHHHHHHHHHTTCCEEE--ECSEE
T ss_pred CceEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEE--Eccee
Confidence 477888875 57999999999999999999999998 56744
No 106
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=78.73 E-value=13 Score=37.48 Aligned_cols=40 Identities=25% Similarity=0.361 Sum_probs=35.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (601)
+.|.++| .+|.||=.+++.++.+++..|.+|..+-.|++-
T Consensus 99 ~~i~i~g--~~G~GKTT~~~~la~~~~~~~~~v~l~~~d~~~ 138 (295)
T 1ls1_A 99 NLWFLVG--LQGSGKTTTAAKLALYYKGKGRRPLLVAADTQR 138 (295)
T ss_dssp EEEEEEC--CTTTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHHcCCeEEEecCCccc
Confidence 5677885 499999999999999999999999999999874
No 107
>3ez9_A Para; DNA binding, winged-HTH, partition, biosynthetic protein; 2.80A {Salmonella enterica subsp} PDB: 3ezf_A
Probab=78.65 E-value=2.1 Score=44.92 Aligned_cols=45 Identities=22% Similarity=0.365 Sum_probs=30.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHH------HCCCeeEEeeecccccCC
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLK------ACGLRVTCIKIDPYLNTD 46 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~------~~g~~v~~~k~dpyln~d 46 (601)
+|-|.|++| --|.||=.+|+.++..|. .+|.||-.+-+||.-|..
T Consensus 111 ~~vIav~s~-KGGvGKTT~a~nLA~~LA~~g~~~~~g~rVlliD~D~~~~l~ 161 (403)
T 3ez9_A 111 PYVIFVVNL-KGGVSKTVSTVTLAHALRVHQDLLRHDLRILVIDLDPQASST 161 (403)
T ss_dssp CEEEEECCC---------CHHHHHHHHHSCGGGGGGCCCEEEEEESSSSGGG
T ss_pred ceEEEEEcC-CCCchHHHHHHHHHHHHHhcchhhcCCCeEEEEeCCCCCChh
Confidence 466777654 367899999999999998 689999999999976644
No 108
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=77.21 E-value=0.57 Score=46.31 Aligned_cols=44 Identities=23% Similarity=0.206 Sum_probs=31.2
Q ss_pred ccCCCEEEECCC-CCCCc---hhHHHHHHHHHHHcCC-CEEEEehhHHHHH
Q 007496 360 LKGADGILVPGG-FGNRG---VQGKILAAKYAREHRI-PYLGICLGMQVAV 405 (601)
Q Consensus 360 L~~~DGIlvpGG-fG~rg---~eg~i~aik~are~~i-P~LGICLGmQlla 405 (601)
...+|.|+|||| +|.+. .+..+..+ ..+++. ++.+||-|-.+|+
T Consensus 78 ~~~~D~liVPGG~~g~~~l~~~~~l~~~L--~~~~~~~~IaaIC~G~~lLa 126 (236)
T 3bhn_A 78 VKEQDVVLITSGYRGIPAALQDENFMSAL--KLDPSRQLIGSICAGSFVLH 126 (236)
T ss_dssp GGGCSEEEECCCTTHHHHHHTCHHHHHHC--CCCTTTCEEEEETTHHHHHH
T ss_pred ccCCCEEEEcCCccCHhhhccCHHHHHHH--HhCCCCCEEEEEcHHHHHHH
Confidence 467899999999 56532 23344555 233455 9999999999886
No 109
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=76.51 E-value=2.3 Score=44.08 Aligned_cols=40 Identities=28% Similarity=0.486 Sum_probs=35.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (601)
|++|++| -.|.||=.+|++++..|..+|.||-.+-.||--
T Consensus 17 ~i~~~sg--kGGvGKTt~a~~lA~~la~~g~~vllid~D~~~ 56 (334)
T 3iqw_A 17 RWIFVGG--KGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAH 56 (334)
T ss_dssp CEEEEEC--STTSSHHHHHHHHHHHHTTSSSCEEEEECCSSC
T ss_pred EEEEEeC--CCCccHHHHHHHHHHHHHhCCCcEEEEECCCCC
Confidence 5666655 789999999999999999999999999999743
No 110
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=76.05 E-value=2.4 Score=44.26 Aligned_cols=40 Identities=35% Similarity=0.531 Sum_probs=36.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHH--HCCCeeEEeeeccc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLK--ACGLRVTCIKIDPY 42 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~--~~g~~v~~~k~dpy 42 (601)
+|++|++| -.|.||=.+|+.++..|. ..|.||-.+-.||-
T Consensus 18 ~~i~~~~g--kGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~ 59 (348)
T 3io3_A 18 LKWIFVGG--KGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPA 59 (348)
T ss_dssp CSEEEEEC--STTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred cEEEEEeC--CCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 46788887 889999999999999999 99999999999985
No 111
>2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes}
Probab=75.77 E-value=2.4 Score=42.07 Aligned_cols=42 Identities=19% Similarity=0.266 Sum_probs=35.7
Q ss_pred EEEEeCC-ccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 007496 3 YVLVTGG-VVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (601)
Q Consensus 3 ~i~vtgg-v~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln 44 (601)
-|.|++. .=.|.||=.+|+.++..|..+|+||-.+..||.-|
T Consensus 36 ~i~v~~~s~KGGvGKTT~a~nLA~~la~~G~rVlliD~D~q~~ 78 (298)
T 2oze_A 36 AIVILNNYFKGGVGKSKLSTMFAYLTDKLNLKVLMIDKDLQAT 78 (298)
T ss_dssp CEEEEECCSSSSSSHHHHHHHHHHHHHHTTCCEEEEEECTTCH
T ss_pred EEEEEeccCCCCchHHHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 3445542 56789999999999999999999999999999865
No 112
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=74.58 E-value=1.6 Score=44.42 Aligned_cols=72 Identities=26% Similarity=0.236 Sum_probs=49.0
Q ss_pred ceEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCCc
Q 007496 297 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 376 (601)
Q Consensus 297 ~v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~rg 376 (601)
.+||+|+++...- ...+.+.|+..|+++.+ +... . +.+.++|.|++=||=|
T Consensus 29 ~mki~iv~~~~~~---~~~l~~~L~~~g~~v~~-------~~~~-~---------------~~~~~~DlvIvlGGDG--- 79 (278)
T 1z0s_A 29 GMRAAVVYKTDGH---VKRIEEALKRLEVEVEL-------FNQP-S---------------EELENFDFIVSVGGDG--- 79 (278)
T ss_dssp -CEEEEEESSSTT---HHHHHHHHHHTTCEEEE-------ESSC-C---------------GGGGGSSEEEEEECHH---
T ss_pred ceEEEEEeCCcHH---HHHHHHHHHHCCCEEEE-------cccc-c---------------cccCCCCEEEEECCCH---
Confidence 4799999875532 56788899999887532 1110 0 2356889999999732
Q ss_pred hhHHHHHHHHHHHcCCCEEEEehh
Q 007496 377 VQGKILAAKYAREHRIPYLGICLG 400 (601)
Q Consensus 377 ~eg~i~aik~are~~iP~LGICLG 400 (601)
-++.+++.+... +|++||=+|
T Consensus 80 --T~L~aa~~~~~~-~PilGIN~G 100 (278)
T 1z0s_A 80 --TILRILQKLKRC-PPIFGINTG 100 (278)
T ss_dssp --HHHHHHTTCSSC-CCEEEEECS
T ss_pred --HHHHHHHHhCCC-CcEEEECCC
Confidence 245677766555 999999887
No 113
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=74.50 E-value=2.9 Score=46.12 Aligned_cols=40 Identities=30% Similarity=0.496 Sum_probs=35.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (601)
+|++|++|- .|.||=.+|+.++..|..+|.||-.+-.||-
T Consensus 8 ~~i~~~sgk--GGvGKTT~a~~lA~~lA~~G~rVLlvd~D~~ 47 (589)
T 1ihu_A 8 PPYLFFTGK--GGVGKTSISCATAIRLAEQGKRVLLVSTDPA 47 (589)
T ss_dssp CSEEEEECS--TTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CEEEEEeCC--CcCHHHHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 367777764 9999999999999999999999999999983
No 114
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=73.62 E-value=4 Score=40.67 Aligned_cols=41 Identities=20% Similarity=0.352 Sum_probs=36.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (601)
+|-|+||+. -.|.||=.+|+.++..|...|.||-.|-.||.
T Consensus 82 ~kvI~vts~-kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 82 VQSIVITSE-APGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCEEEEECS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CeEEEEECC-CCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 467888864 56999999999999999999999999999964
No 115
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=72.74 E-value=2.5 Score=39.45 Aligned_cols=40 Identities=25% Similarity=0.331 Sum_probs=34.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (601)
|+.|.|+| -||-||=.++..|..+++..|+++-.||+|+.
T Consensus 2 ~~~v~IvG--~SGsGKSTL~~~L~~~~~~~g~~~G~I~~dg~ 41 (171)
T 2f1r_A 2 SLILSIVG--TSDSGKTTLITRMMPILRERGLRVAVVKRHAH 41 (171)
T ss_dssp -CEEEEEE--SCHHHHHHHHHHHHHHHHHTTCCEEEEEC---
T ss_pred ceEEEEEC--CCCCCHHHHHHHHHHHhhhcCCceEEEEEcCc
Confidence 57888999 79999999999999999999999999999874
No 116
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=72.38 E-value=3.6 Score=40.52 Aligned_cols=34 Identities=41% Similarity=0.654 Sum_probs=29.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (601)
|| |+||||- |-+.+.+-..|.++|++|+.+--+|
T Consensus 1 Mk-ILVTGat------GfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MR-VLVGGGT------GFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CE-EEEECCC------CHHHHHHHHHHHHCCCEEEEEECCC
Confidence 88 9999964 8888999999999999999985543
No 117
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=72.32 E-value=24 Score=36.98 Aligned_cols=152 Identities=18% Similarity=0.175 Sum_probs=92.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEecCCccccCCCCccccccCC
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 80 (601)
+|-|||||= =+++||=.++..|-+.|+.+|+++..+|-- |-|..- +|.-.-+|-
T Consensus 152 ~k~i~v~GT-D~~VGK~~ts~~L~~~l~~~G~~a~~~~tg-------------qtg~~~---~~~gi~~Da--------- 205 (349)
T 2obn_A 152 CRRVLTVGT-DMAIGKMSTSLELHWAAKLRGWRSKFLATG-------------QTGVML---EGDGVALDA--------- 205 (349)
T ss_dssp SEEEEEEES-SSSSSHHHHHHHHHHHHHHTTCCEEEECCS-------------HHHHHH---HSCSCCGGG---------
T ss_pred ceEEEEcCC-CccccceeHHHHHHHHHHhcCCcEEEEecc-------------chhhhh---hcCCcchhH---------
Confidence 367899986 777999999999999999999999985422 333210 111111111
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 007496 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (601)
Q Consensus 81 ~l~~~~n~t~gkiy~~vi~ker~g~ylg~tvqviphit~~i~~~i~~~~~~~~d~~~~~~dv~i~e~ggtvgdies~pf~ 160 (601)
--....+| ++...+.+. .+++|+++||==|-+--=-+.-.+
T Consensus 206 ---v~~df~aG----------------------------~ve~~~~~~--------~~~~d~vlVEGqGgl~~P~~~~t~ 246 (349)
T 2obn_A 206 ---VRVDFAAG----------------------------AVEQMVMRY--------GKNYDILHIEGQGSLLHPGSTATL 246 (349)
T ss_dssp ---SBHHHHHH----------------------------HHHHHHHHH--------TTTCSEEEECCCCCTTSTTCCTHH
T ss_pred ---HHHHHHhh----------------------------hHHHHHHHh--------ccCCCEEEEeCCCcccCcChHhHH
Confidence 00111122 333334443 246899999965544321122223
Q ss_pred HHHHHHhhHcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhc--------CCCcccEEEEecCCC
Q 007496 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRG--------QGLTPNILACRSTVA 221 (601)
Q Consensus 161 ea~rq~~~~~g~~n~~~ih~~~vp~~~~~~e~ktkptq~sv~~Lrs--------~Gi~pd~iv~R~~~~ 221 (601)
.+-......-+.++|-.=...+..--+..--|-+|.+...+. .|+++-++++.....
T Consensus 247 ----~ll~g~~p~~vILv~~~~~g~i~~~~~~~~p~l~~~i~t~e~l~~~~~~~~~~~V~Gi~lN~~~~ 311 (349)
T 2obn_A 247 ----PLIRGSQPTQLVLVHRAGQTHNGNNPHVPIPPLPEVIRLYETVASGGGAFGTVPVVGIALNTAHL 311 (349)
T ss_dssp ----HHHHHHCCSEEEEEEETTCCBCSSCTTSBCCCHHHHHHHHHHHHHTTTTSCCCCEEEEEEECTTS
T ss_pred ----HHHHHcCCCeEEEEECCCCceECCCCccCCCCHHHHHHHHHHHHHhhccCCCCcEEEEEEECCCC
Confidence 334444556699999876667755556666666777665554 689999999876553
No 118
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=72.29 E-value=2.9 Score=42.85 Aligned_cols=40 Identities=28% Similarity=0.413 Sum_probs=35.2
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007496 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (601)
Q Consensus 3 ~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (601)
-|+||+| --|.||=.+|+.++..|..+|+||-.+-.||.-
T Consensus 20 ~i~v~sg-kGGvGKTTva~~LA~~lA~~G~rVllvD~D~~~ 59 (329)
T 2woo_A 20 KWIFVGG-KGGVGKTTTSCSLAIQMSKVRSSVLLISTDPAH 59 (329)
T ss_dssp CEEEEEC-SSSSSHHHHHHHHHHHHHTSSSCEEEEECCTTC
T ss_pred EEEEEeC-CCCCcHHHHHHHHHHHHHHCCCeEEEEECCCCc
Confidence 4566666 689999999999999999999999999999953
No 119
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=72.16 E-value=2.4 Score=44.13 Aligned_cols=42 Identities=26% Similarity=0.401 Sum_probs=35.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHH--HCCCeeEEeeeccccc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLK--ACGLRVTCIKIDPYLN 44 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~--~~g~~v~~~k~dpyln 44 (601)
|-|.||+| --|.||=.+|++++..|. .+|.||-.+..||--|
T Consensus 18 ~~i~v~sg-KGGvGKTTvaanLA~~lA~~~~G~rVLLvD~D~~~~ 61 (354)
T 2woj_A 18 HKWIFVGG-KGGVGKTTSSCSIAIQMALSQPNKQFLLISTDPAHN 61 (354)
T ss_dssp CCEEEEEE-STTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSSCC
T ss_pred cEEEEEeC-CCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCCCC
Confidence 34556666 789999999999999999 9999999999998533
No 120
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=71.90 E-value=4.5 Score=36.96 Aligned_cols=33 Identities=21% Similarity=0.335 Sum_probs=28.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (601)
++|++||+ +|-||+..+.-+...|+..|+.|..
T Consensus 1 ~~I~l~G~--~GsGKsT~~~~L~~~l~~~g~~v~~ 33 (197)
T 2z0h_A 1 MFITFEGI--DGSGKSTQIQLLAQYLEKRGKKVIL 33 (197)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHHHHHHCCC-EEE
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHHHHCCCeEEE
Confidence 37999997 7889999999999999999998853
No 121
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=71.15 E-value=4 Score=38.72 Aligned_cols=40 Identities=28% Similarity=0.309 Sum_probs=33.8
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 007496 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (601)
Q Consensus 3 ~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln 44 (601)
.|.|+++ =.|.||=.+|+.++..|..+| ||..+..||.-|
T Consensus 2 vI~v~s~-KGGvGKTT~a~~LA~~la~~g-~VlliD~D~q~~ 41 (209)
T 3cwq_A 2 IITVASF-KGGVGKTTTAVHLSAYLALQG-ETLLIDGDPNRS 41 (209)
T ss_dssp EEEEEES-STTSSHHHHHHHHHHHHHTTS-CEEEEEECTTCH
T ss_pred EEEEEcC-CCCCcHHHHHHHHHHHHHhcC-CEEEEECCCCCC
Confidence 4555543 578999999999999999999 999999999643
No 122
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=70.19 E-value=16 Score=34.61 Aligned_cols=86 Identities=14% Similarity=0.087 Sum_probs=45.2
Q ss_pred eEEEEEcccCCCcchH-HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cC-CCEEEECCCCC
Q 007496 298 VRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KG-ADGILVPGGFG 373 (601)
Q Consensus 298 v~IalVGkY~~l~DaY-~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~-~DGIlvpGGfG 373 (601)
++||++-.. ..+.| ..+.+.++.+..+.+..+.+.+.++. .+++...++.+.+ .+ +|||++.+...
T Consensus 1 ~~Ig~i~~~--~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~--------~~~~~~~~~i~~l~~~~~vdgii~~~~~~ 70 (276)
T 3ksm_A 1 PKLLLVLKG--DSNAYWRQVYLGAQKAADEAGVTLLHRSTKDD--------GDIAGQIQILSYHLSQAPPDALILAPNSA 70 (276)
T ss_dssp CEEEEECSC--SSSTHHHHHHHHHHHHHHHHTCEEEECCCSST--------TCHHHHHHHHHHHHHHSCCSEEEECCSST
T ss_pred CeEEEEeCC--CCChHHHHHHHHHHHHHHHcCCEEEEECCCCC--------CCHHHHHHHHHHHHHhCCCCEEEEeCCCH
Confidence 478888432 33344 45666665555555554444333222 1121211222222 46 99999987321
Q ss_pred CCchhHHHHHHHHHHHcCCCEEEE
Q 007496 374 NRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 374 ~rg~eg~i~aik~are~~iP~LGI 397 (601)
.. ....++.+.+.++|+.-+
T Consensus 71 -~~---~~~~~~~~~~~~ipvV~~ 90 (276)
T 3ksm_A 71 -ED---LTPSVAQYRARNIPVLVV 90 (276)
T ss_dssp -TT---THHHHHHHHHTTCCEEEE
T ss_pred -HH---HHHHHHHHHHCCCcEEEE
Confidence 11 224566777889998765
No 123
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=69.08 E-value=1.9 Score=40.21 Aligned_cols=36 Identities=22% Similarity=0.415 Sum_probs=31.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
++|.|+| .||-||...+..|...|...|++|..++-
T Consensus 1 ~~I~i~G--~~GsGKsTl~~~L~~~l~~~g~~v~~~~~ 36 (214)
T 1gtv_A 1 MLIAIEG--VDGAGKRTLVEKLSGAFRAAGRSVATLAF 36 (214)
T ss_dssp CEEEEEE--EEEEEHHHHHHHHHHHHHEEEEEEEEEES
T ss_pred CEEEEEc--CCCCCHHHHHHHHHHHHHhcCCeEEEEee
Confidence 4788888 68999999999999999999999987763
No 124
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=69.06 E-value=2.4 Score=40.32 Aligned_cols=34 Identities=29% Similarity=0.400 Sum_probs=24.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
||-|+||||- +|||+.++ +.|..+|++|...=.+
T Consensus 1 Mk~vlVTGas-~gIG~~~a-----~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGAS-SGLGAELA-----KLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTT-SHHHHHHH-----HHHHHTTCCEEEEESC
T ss_pred CCEEEEecCC-chHHHHHH-----HHHHHCCCEEEEEeCC
Confidence 8999999996 88887654 5677889998876443
No 125
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=64.22 E-value=8.9 Score=39.34 Aligned_cols=39 Identities=21% Similarity=0.414 Sum_probs=35.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (601)
+.|.|+| . +|-||=.+++.|+.+|+..|.+|..+-.|+|
T Consensus 106 ~vI~ivG-~-~G~GKTT~~~~LA~~l~~~g~kVllid~D~~ 144 (320)
T 1zu4_A 106 NIFMLVG-V-NGTGKTTSLAKMANYYAELGYKVLIAAADTF 144 (320)
T ss_dssp EEEEEES-S-TTSSHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred eEEEEEC-C-CCCCHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 5788887 4 9999999999999999999999999999886
No 126
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=62.89 E-value=28 Score=33.65 Aligned_cols=84 Identities=17% Similarity=0.106 Sum_probs=45.6
Q ss_pred ceEEEEEcccCCCcchHH-HHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCCC
Q 007496 297 PVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFG 373 (601)
Q Consensus 297 ~v~IalVGkY~~l~DaY~-SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGfG 373 (601)
+.+||++-. ...+.|. .+.+.++.+..+.+..+ .+.++.+. +...+..+.+ .++|||++.+..
T Consensus 2 ~~~Ig~i~~--~~~~~~~~~~~~gi~~~a~~~g~~~--~~~~~~~~---------~~~~~~i~~l~~~~vdgiii~~~~- 67 (306)
T 8abp_A 2 NLKLGFLVK--QPEEPWFQTEWKFADKAGKDLGFEV--IKIAVPDG---------EKTLNAIDSLAASGAKGFVICTPD- 67 (306)
T ss_dssp CEEEEEEES--CTTSHHHHHHHHHHHHHHHHHTEEE--EEEECCSH---------HHHHHHHHHHHHTTCCEEEEECSC-
T ss_pred CeEEEEEeC--CCCchHHHHHHHHHHHHHHHcCCEE--EEeCCCCH---------HHHHHHHHHHHHcCCCEEEEeCCC-
Confidence 478999843 3444554 55566655555444443 23343221 1111122222 589999998731
Q ss_pred CCchhHHHHHHHHHHHcCCCEEEE
Q 007496 374 NRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 374 ~rg~eg~i~aik~are~~iP~LGI 397 (601)
. ......++.+.+.++|+.-+
T Consensus 68 -~--~~~~~~~~~~~~~~iPvV~~ 88 (306)
T 8abp_A 68 -P--KLGSAIVAKARGYDMKVIAV 88 (306)
T ss_dssp -G--GGHHHHHHHHHHTTCEEEEE
T ss_pred -c--hhhHHHHHHHHHCCCcEEEe
Confidence 1 22334577788889998643
No 127
>2oyn_A Hypothetical protein MJ0056; structural genomics, unknown function, PSI-2, protein structure initiative; HET: CDP; 1.85A {Methanocaldococcus jannaschii DSM2661} SCOP: b.43.5.2 PDB: 2p3m_A 2vbs_A 2vbt_A* 2vbu_A* 2vbv_A*
Probab=62.73 E-value=2.7 Score=38.89 Aligned_cols=41 Identities=34% Similarity=0.537 Sum_probs=30.8
Q ss_pred EEEEEeCCccCCcchHHHHHHH----HHHHHHCCCe----eEEeeeccc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSI----GVLLKACGLR----VTCIKIDPY 42 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~----g~ll~~~g~~----v~~~k~dpy 42 (601)
|-+-++|=|+||+|+|----|+ -..++..||. --.+|+||.
T Consensus 5 ~~i~l~G~VvSGlGEG~~y~sl~~Y~~qf~~~LGF~PfPGTLNi~l~~~ 53 (146)
T 2oyn_A 5 KLMIIEGEVVSGLGEGRYFLSLPPYKEIFKKILGFEPYEGTLNLKLDRE 53 (146)
T ss_dssp CEEEEEEEEECCSSHHHHHTTSHHHHHHHHHHHSSCCCSSCEEEEEEEE
T ss_pred eEEEEEEEEEccccceEEEEeCHHHHHHHHHHhCCcCCCCcEEEEeCch
Confidence 5678999999999999988887 5667777873 233555554
No 128
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=62.69 E-value=4.2 Score=43.68 Aligned_cols=40 Identities=30% Similarity=0.476 Sum_probs=36.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (601)
+.|.++|- .|.||=.+++.++..|+.+|++|..+-.|||-
T Consensus 100 ~vI~ivG~--~GvGKTTla~~La~~l~~~G~kVllv~~D~~r 139 (432)
T 2v3c_C 100 NVILLVGI--QGSGKTTTAAKLARYIQKRGLKPALIAADTYR 139 (432)
T ss_dssp CCEEEECC--SSSSTTHHHHHHHHHHHHHHCCEEEECCSCCC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEeccccC
Confidence 36778883 89999999999999999999999999999984
No 129
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=62.21 E-value=36 Score=32.58 Aligned_cols=86 Identities=14% Similarity=0.052 Sum_probs=45.8
Q ss_pred CceEEEEEcccCCCcchHH-HHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCC
Q 007496 296 EPVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 372 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY~-SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGf 372 (601)
++.+||++-. ...+.|. .+++.++.+..+.+..+.+...+. +++...+..+.+ .++||||+.+..
T Consensus 4 ~~~~Ig~i~~--~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~----------~~~~~~~~~~~l~~~~vdgiIi~~~~ 71 (291)
T 3l49_A 4 EGKTIGITAI--GTDHDWDLKAYQAQIAEIERLGGTAIALDAGR----------NDQTQVSQIQTLIAQKPDAIIEQLGN 71 (291)
T ss_dssp TTCEEEEEES--CCSSHHHHHHHHHHHHHHHHTTCEEEEEECTT----------CHHHHHHHHHHHHHHCCSEEEEESSC
T ss_pred CCcEEEEEeC--CCCChHHHHHHHHHHHHHHHcCCEEEEEcCCC----------CHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 4568998843 3344553 455555555444444433332221 111111222223 589999987632
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 373 GNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 373 G~rg~eg~i~aik~are~~iP~LGI 397 (601)
. ......++.+.+.++|+.-+
T Consensus 72 ~----~~~~~~~~~~~~~~iPvV~~ 92 (291)
T 3l49_A 72 L----DVLNPWLQKINDAGIPLFTV 92 (291)
T ss_dssp H----HHHHHHHHHHHHTTCCEEEE
T ss_pred h----hhhHHHHHHHHHCCCcEEEe
Confidence 1 22335677788889998765
No 130
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=61.91 E-value=5.3 Score=42.20 Aligned_cols=90 Identities=17% Similarity=0.224 Sum_probs=52.6
Q ss_pred eEEEEEcccCC--CcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhh-----------HHHHhccCCC
Q 007496 298 VRIAMVGKYTG--LSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYK-----------AAWKLLKGAD 364 (601)
Q Consensus 298 v~IalVGkY~~--l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~-----------~a~~~L~~~D 364 (601)
-+|+||+|+.+ .......+.+.|...++.+-+ +..-.+......+ ..|. ...+.-..+|
T Consensus 39 k~I~iv~K~~~~~~~~~~~~l~~~L~~~~~~V~v-------e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D 110 (365)
T 3pfn_A 39 KSVLVIKKMRDASLLQPFKELCTHLMEENMIVYV-------EKKVLEDPAIASD-ESFGAVKKKFCTFREDYDDISNQID 110 (365)
T ss_dssp CEEEEEECTTCGGGHHHHHHHHHHHHHTSCEEEE-------EHHHHHSHHHHHC-STTHHHHHHCEEECTTTCCCTTTCS
T ss_pred CEEEEEecCCCHHHHHHHHHHHHHHHHCCCEEEE-------ehHHhhhhccccc-cccccccccccccccChhhcccCCC
Confidence 47999999864 234456788999988765422 2110000000000 0000 0001225789
Q ss_pred EEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEehh
Q 007496 365 GILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLG 400 (601)
Q Consensus 365 GIlvpGGfG~rg~eg~i~aik~are~~iP~LGICLG 400 (601)
-||+=||=| -++.+++++....+|++||=+|
T Consensus 111 lvI~lGGDG-----T~L~aa~~~~~~~~PvlGiN~G 141 (365)
T 3pfn_A 111 FIICLGGDG-----TLLYASSLFQGSVPPVMAFHLG 141 (365)
T ss_dssp EEEEESSTT-----HHHHHHHHCSSSCCCEEEEESS
T ss_pred EEEEEcChH-----HHHHHHHHhccCCCCEEEEcCC
Confidence 999999754 2567777776778999999887
No 131
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=61.38 E-value=8 Score=38.92 Aligned_cols=40 Identities=18% Similarity=0.301 Sum_probs=35.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (601)
|-|.||++ -.|.||=.+|+.++..|...|.||-.|-.||.
T Consensus 93 kvI~vts~-kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 93 NVLMMTGV-SPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp CEEEEEES-SSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred eEEEEECC-CCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 66778765 46899999999999999999999999999985
No 132
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=61.00 E-value=6.1 Score=37.88 Aligned_cols=34 Identities=26% Similarity=0.571 Sum_probs=25.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
||-|+||||- +|||+.+ .+.|..+|++|...-.+
T Consensus 1 mk~vlVTGas-~gIG~~~-----a~~l~~~G~~V~~~~r~ 34 (257)
T 1fjh_A 1 MSIIVISGCA-TGIGAAT-----RKVLEAAGHQIVGIDIR 34 (257)
T ss_dssp CCEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 7899999984 7777754 45677789999876443
No 133
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=60.89 E-value=5.8 Score=38.35 Aligned_cols=31 Identities=29% Similarity=0.326 Sum_probs=24.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
||-++||||- +|||+.+ .+.|..+|++|...
T Consensus 1 Mk~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~ 31 (254)
T 1zmt_A 1 MSTAIVTNVK-HFGGMGS-----ALRLSEAGHTVACH 31 (254)
T ss_dssp -CEEEESSTT-STTHHHH-----HHHHHHTTCEEEEC
T ss_pred CeEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 7899999996 8999864 45677789988765
No 134
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=59.24 E-value=13 Score=38.00 Aligned_cols=40 Identities=20% Similarity=0.326 Sum_probs=36.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (601)
+.|.++|- +|-||=.+++.|+.+|+..|.+|..+-.|+|-
T Consensus 105 ~vi~ivG~--~GsGKTTl~~~LA~~l~~~g~kV~lv~~D~~r 144 (306)
T 1vma_A 105 FVIMVVGV--NGTGKTTSCGKLAKMFVDEGKSVVLAAADTFR 144 (306)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEEEECTTC
T ss_pred eEEEEEcC--CCChHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 57888983 99999999999999999999999999999863
No 135
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=59.02 E-value=11 Score=34.16 Aligned_cols=34 Identities=26% Similarity=0.257 Sum_probs=28.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
+.|++||+ +|-||...|.-+...|...|+.|...
T Consensus 1 ~~I~l~G~--~GsGKsT~~~~L~~~l~~~g~~~i~~ 34 (195)
T 2pbr_A 1 MLIAFEGI--DGSGKTTQAKKLYEYLKQKGYFVSLY 34 (195)
T ss_dssp CEEEEECS--TTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHHHHCCCeEEEE
Confidence 36899998 67799999999999998889877543
No 136
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=58.47 E-value=43 Score=32.09 Aligned_cols=90 Identities=16% Similarity=0.134 Sum_probs=46.0
Q ss_pred CceEEEEEcccCCCcchH-HHHHHHHHHccccc-eeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCC
Q 007496 296 EPVRIAMVGKYTGLSDAY-LSILKALLHASVDL-RKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGG 371 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY-~SIi~aL~~ag~~~-~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGG 371 (601)
+..+||++-... ..+.| ..+++.++.+..+. +..+.+.+...+. .+++...+..+.+ .++||||+.+.
T Consensus 7 ~~~~Igvi~~~~-~~~~~~~~~~~gi~~~a~~~~g~~~~~~~~~~~~-------~~~~~~~~~i~~l~~~~vdgiii~~~ 78 (304)
T 3gbv_A 7 KKYTFACLLPKH-LEGEYWTDVQKGIREAVTTYSDFNISANITHYDP-------YDYNSFVATSQAVIEEQPDGVMFAPT 78 (304)
T ss_dssp CCEEEEEEEECC-CTTSHHHHHHHHHHHHHHHTGGGCEEEEEEEECS-------SCHHHHHHHHHHHHTTCCSEEEECCS
T ss_pred CcceEEEEecCC-CCchHHHHHHHHHHHHHHHHHhCCeEEEEEcCCC-------CCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 456898773221 03344 45666665554443 3334444443211 1122222222333 58999999874
Q ss_pred CCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 372 FGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 372 fG~rg~eg~i~aik~are~~iP~LGI 397 (601)
.. +.....++.+.+.++|+.-+
T Consensus 79 ~~----~~~~~~~~~~~~~~iPvV~~ 100 (304)
T 3gbv_A 79 VP----QYTKGFTDALNELGIPYIYI 100 (304)
T ss_dssp SG----GGTHHHHHHHHHHTCCEEEE
T ss_pred Ch----HHHHHHHHHHHHCCCeEEEE
Confidence 21 11234566777779998655
No 137
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=58.23 E-value=44 Score=31.95 Aligned_cols=86 Identities=9% Similarity=-0.002 Sum_probs=43.9
Q ss_pred CceEEEEEcccCCCcchH-HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCC
Q 007496 296 EPVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 372 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY-~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGf 372 (601)
+..+||++-. ...+.| ..+.+.++.+..+.+..+.+...+. +++.-.+..+.+ .++||||+.+..
T Consensus 7 ~~~~Ig~i~~--~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~----------~~~~~~~~~~~l~~~~vdgiI~~~~~ 74 (293)
T 3l6u_A 7 KRNIVGFTIV--NDKHEFAQRLINAFKAEAKANKYEALVATSQN----------SRISEREQILEFVHLKVDAIFITTLD 74 (293)
T ss_dssp --CEEEEEES--CSCSHHHHHHHHHHHHHHHHTTCEEEEEECSS----------CHHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred CCcEEEEEEe--cCCcHHHHHHHHHHHHHHHHcCCEEEEECCCC----------CHHHHHHHHHHHHHcCCCEEEEecCC
Confidence 4468998842 233344 3555555555444444443333221 111111122222 589999997642
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 373 GNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 373 G~rg~eg~i~aik~are~~iP~LGI 397 (601)
.+ . ....++.+.+.++|+.-+
T Consensus 75 ~~-~---~~~~~~~~~~~~iPvV~~ 95 (293)
T 3l6u_A 75 DV-Y---IGSAIEEAKKAGIPVFAI 95 (293)
T ss_dssp TT-T---THHHHHHHHHTTCCEEEE
T ss_pred hH-H---HHHHHHHHHHcCCCEEEe
Confidence 22 1 124567777889998765
No 138
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=57.05 E-value=11 Score=38.24 Aligned_cols=38 Identities=24% Similarity=0.477 Sum_probs=34.0
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHH-CCCeeEEeeeccc
Q 007496 3 YVLVTGGVVSGLGKGVTASSIGVLLKA-CGLRVTCIKIDPY 42 (601)
Q Consensus 3 ~i~vtggv~s~~gkg~~~~s~g~ll~~-~g~~v~~~k~dpy 42 (601)
.|.++|- +|.||=.+++.++.+|+. .|.+|..+-.|||
T Consensus 107 vi~lvG~--~GsGKTTl~~~LA~~l~~~~G~~V~lv~~D~~ 145 (296)
T 2px0_A 107 YIVLFGS--TGAGKTTTLAKLAAISMLEKHKKIAFITTDTY 145 (296)
T ss_dssp EEEEEES--TTSSHHHHHHHHHHHHHHTTCCCEEEEECCCS
T ss_pred EEEEECC--CCCCHHHHHHHHHHHHHHhcCCEEEEEecCcc
Confidence 5677764 799999999999999995 8999999999997
No 139
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=55.99 E-value=14 Score=34.53 Aligned_cols=40 Identities=23% Similarity=0.293 Sum_probs=34.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (601)
..|.|+|+ ||-||-.++..|..+|+..|.+|...-.|.+.
T Consensus 23 ~~i~i~G~--~GsGKstl~~~l~~~~~~~~~~v~~~~~d~~~ 62 (201)
T 1rz3_A 23 LVLGIDGL--SRSGKTTLANQLSQTLREQGISVCVFHMDDHI 62 (201)
T ss_dssp EEEEEEEC--TTSSHHHHHHHHHHHHHHTTCCEEEEEGGGGC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHhhcCCeEEEeccCccc
Confidence 56888997 88999999999999999999999888878664
No 140
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=55.53 E-value=49 Score=31.96 Aligned_cols=87 Identities=13% Similarity=0.106 Sum_probs=45.6
Q ss_pred ceEEEEEcccCCCcchH-HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCCC
Q 007496 297 PVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFG 373 (601)
Q Consensus 297 ~v~IalVGkY~~l~DaY-~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGfG 373 (601)
..+|+++-.. ..+.| ..+.+.++.+..+.+..+. +..+... .+++.-.++.+.+ .++|||++.+...
T Consensus 3 ~~~Igvi~~~--~~~~~~~~~~~gi~~~a~~~g~~~~--~~~~~~~------~~~~~~~~~i~~l~~~~vdgiii~~~~~ 72 (297)
T 3rot_A 3 RDKYYLITHG--SQDPYWTSLFQGAKKAAEELKVDLQ--ILAPPGA------NDVPKQVQFIESALATYPSGIATTIPSD 72 (297)
T ss_dssp CCEEEEECSC--CCSHHHHHHHHHHHHHHHHHTCEEE--EECCSSS------CCHHHHHHHHHHHHHTCCSEEEECCCCS
T ss_pred eEEEEEEecC--CCCchHHHHHHHHHHHHHHhCcEEE--EECCCCc------CCHHHHHHHHHHHHHcCCCEEEEeCCCH
Confidence 4689998532 23344 3566666555555444433 3333211 0111222222333 5899999976422
Q ss_pred CCchhHHHHHHHHHHHcCCCEEEE
Q 007496 374 NRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 374 ~rg~eg~i~aik~are~~iP~LGI 397 (601)
+ .. ...++.+++.++|+.-+
T Consensus 73 ~-~~---~~~~~~~~~~giPvV~~ 92 (297)
T 3rot_A 73 T-AF---SKSLQRANKLNIPVIAV 92 (297)
T ss_dssp S-TT---HHHHHHHHHHTCCEEEE
T ss_pred H-HH---HHHHHHHHHCCCCEEEE
Confidence 1 22 34567777889998654
No 141
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=55.50 E-value=53 Score=31.25 Aligned_cols=84 Identities=13% Similarity=0.121 Sum_probs=46.6
Q ss_pred CceEEEEEcccCCCcchH-HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCC
Q 007496 296 EPVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 372 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY-~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGf 372 (601)
+..+||++- ....+.| ..+++.++.+..+.+..+.+...+.+ ++.-.+..+.+ .++||||+.+..
T Consensus 6 ~s~~Igvi~--~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~----------~~~~~~~~~~l~~~~vdgiIi~~~~ 73 (276)
T 3jy6_A 6 SSKLIAVIV--ANIDDYFSTELFKGISSILESRGYIGVLFDANAD----------IEREKTLLRAIGSRGFDGLILQSFS 73 (276)
T ss_dssp CCCEEEEEE--SCTTSHHHHHHHHHHHHHHHTTTCEEEEEECTTC----------HHHHHHHHHHHHTTTCSEEEEESSC
T ss_pred CCcEEEEEe--CCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCC----------HHHHHHHHHHHHhCCCCEEEEecCC
Confidence 456799883 2334444 45666666665555555444443221 11111112223 589999998743
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEEe
Q 007496 373 GNRGVQGKILAAKYAREHRIPYLGIC 398 (601)
Q Consensus 373 G~rg~eg~i~aik~are~~iP~LGIC 398 (601)
. ...++.+.+.++|+.-+.
T Consensus 74 ~-------~~~~~~l~~~~iPvV~i~ 92 (276)
T 3jy6_A 74 N-------PQTVQEILHQQMPVVSVD 92 (276)
T ss_dssp C-------HHHHHHHHTTSSCEEEES
T ss_pred c-------HHHHHHHHHCCCCEEEEe
Confidence 2 345667777899987653
No 142
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=55.34 E-value=8.7 Score=33.76 Aligned_cols=39 Identities=21% Similarity=0.271 Sum_probs=32.2
Q ss_pred hccCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 359 LLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 359 ~L~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGI 397 (601)
.++.+|++++.-|.-+...++....|+.|.+.++|++||
T Consensus 35 ~I~~~~~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV 73 (111)
T 1eiw_A 35 TPEDADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITV 73 (111)
T ss_dssp CSSSCSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEE
T ss_pred ccccCCEEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEE
Confidence 368999999888776666666777788999999999998
No 143
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=55.21 E-value=25 Score=32.51 Aligned_cols=94 Identities=16% Similarity=0.128 Sum_probs=55.2
Q ss_pred eEEEEEcccCCCc-c--hHHHHHHHHHHccccceeEEEEEeecCCCccccc---ccCCchhhhHHHHhccCCCEEEECCC
Q 007496 298 VRIAMVGKYTGLS-D--AYLSILKALLHASVDLRKKLVIDWIPACDLEDAT---EKENPDAYKAAWKLLKGADGILVPGG 371 (601)
Q Consensus 298 v~IalVGkY~~l~-D--aY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~---~~~~p~~y~~a~~~L~~~DGIlvpGG 371 (601)
+||=+.|-..... + .|..+.+.|+..| .+- . .|+..++++... ......-|..-.+.+..+|.||.-.-
T Consensus 3 mkIYlAGP~f~~~e~~~~~~~i~~~L~~~G-~Vl---~-~hv~~~~l~~~g~~~~~~~~~i~~~d~~~i~~aD~vvA~l~ 77 (152)
T 4fyk_A 3 RSVYFCGSIRGGREDQALYARIVSRLRRYG-KVL---T-EHVADAELEPLGEEAAGGDQFIHEQNLNWLQQADVVVAEVT 77 (152)
T ss_dssp CEEEEECCSTTCCTTHHHHHHHHHHHTTTS-EEC---C-CC-------------CCCHHHHHHHHHHHHHHCSEEEEECS
T ss_pred ceEEEECCCCCcHHHHHHHHHHHHHHHHcC-ccc---c-cccCchhhhhccccccCCHHHHHHHHHHHHHHCCEEEEeCC
Confidence 5777887665432 2 5678999999998 421 1 456554443221 11222345544556789999887443
Q ss_pred CCCCchhHHHHHHHHHHHcCCCEEEEeh
Q 007496 372 FGNRGVQGKILAAKYAREHRIPYLGICL 399 (601)
Q Consensus 372 fG~rg~eg~i~aik~are~~iP~LGICL 399 (601)
....|..--+-||...++|+++.|.
T Consensus 78 ---~~d~Gt~~EiG~A~algkPV~~l~~ 102 (152)
T 4fyk_A 78 ---QPSLGVGYELGRAVALGKPILCLFR 102 (152)
T ss_dssp ---SCCHHHHHHHHHHHHTTCCEEEEEC
T ss_pred ---CCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 2234555667888889999999886
No 144
>3ez2_A Plasmid partition protein A; type IA, DNA binding, winged-HTH, DNA bindin; HET: ADP EPE; 2.05A {Escherichia coli} PDB: 3ez6_A* 3ez7_A
Probab=55.21 E-value=14 Score=38.32 Aligned_cols=43 Identities=23% Similarity=0.392 Sum_probs=36.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHH------CCCeeEEeeeccccc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKA------CGLRVTCIKIDPYLN 44 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~------~g~~v~~~k~dpyln 44 (601)
+|-|.|++|- -|.||=.+|+.++..|.. +|.||-.+-+||.-|
T Consensus 108 ~~vIav~s~K-GGvGKTT~a~nLA~~La~~~~~~~~g~rVlliD~D~q~~ 156 (398)
T 3ez2_A 108 AYVIFISNLK-GGVSKTVSTVSLAHAMRAHPHLLMEDLRILVIDLDPQSS 156 (398)
T ss_dssp CEEEEECCSS-SSSSHHHHHHHHHHHHHHCTTTGGGCCCEEEEEECTTCH
T ss_pred CeEEEEEeCC-CCccHHHHHHHHHHHHHhcchhhcCCCeEEEEeCCCCCC
Confidence 4667777654 789999999999999984 799999999999654
No 145
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=54.62 E-value=10 Score=38.50 Aligned_cols=94 Identities=26% Similarity=0.269 Sum_probs=47.4
Q ss_pred eEEEEEcccCCC--cchHHHHHHHHHHccccceeEEEEEeecCCCcc-----cccccC---CchhhhHHHHhccCCCEEE
Q 007496 298 VRIAMVGKYTGL--SDAYLSILKALLHASVDLRKKLVIDWIPACDLE-----DATEKE---NPDAYKAAWKLLKGADGIL 367 (601)
Q Consensus 298 v~IalVGkY~~l--~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le-----~~~~~~---~p~~y~~a~~~L~~~DGIl 367 (601)
.||+++.+..+- ......+.+.|+..|+++.+. ...++++. ...... +...+........++|.|+
T Consensus 5 ~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vi 80 (307)
T 1u0t_A 5 RSVLLVVHTGRDEATETARRVEKVLGDNKIALRVL----SAEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVL 80 (307)
T ss_dssp CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEE----C-----------------------------------CCCEE
T ss_pred CEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEe----cchhhhhhcccccccccccccccccccccccccccCCCEEE
Confidence 378999876542 223457788888888765332 11111110 000000 0000000001235789999
Q ss_pred ECCCCCCCchhHHHHHHHHHHHcCCCEEEEehh
Q 007496 368 VPGGFGNRGVQGKILAAKYAREHRIPYLGICLG 400 (601)
Q Consensus 368 vpGGfG~rg~eg~i~aik~are~~iP~LGICLG 400 (601)
+-||=| -+..+++.+...++|+|||=+|
T Consensus 81 ~~GGDG-----T~l~a~~~~~~~~~pvlgi~~G 108 (307)
T 1u0t_A 81 VLGGDG-----TFLRAAELARNASIPVLGVNLG 108 (307)
T ss_dssp EEECHH-----HHHHHHHHHHHHTCCEEEEECS
T ss_pred EEeCCH-----HHHHHHHHhccCCCCEEEEeCC
Confidence 999733 2566778877778999999776
No 146
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=54.52 E-value=54 Score=31.61 Aligned_cols=86 Identities=14% Similarity=0.013 Sum_probs=44.5
Q ss_pred ceEEEEEcccCCCcchH-HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCCC
Q 007496 297 PVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFG 373 (601)
Q Consensus 297 ~v~IalVGkY~~l~DaY-~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGfG 373 (601)
..+|+++-.. ..+.| ..+++.++.+..+.+..+.+...... +++...++.+.+ .++||||+.+...
T Consensus 4 ~~~I~~i~~~--~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~---------~~~~~~~~i~~l~~~~vdgiIi~~~~~ 72 (305)
T 3g1w_A 4 NETYMMITFQ--SGMDYWKRCLKGFEDAAQALNVTVEYRGAAQY---------DIQEQITVLEQAIAKNPAGIAISAIDP 72 (305)
T ss_dssp -CEEEEEESS--TTSTHHHHHHHHHHHHHHHHTCEEEEEECSSS---------CHHHHHHHHHHHHHHCCSEEEECCSST
T ss_pred CceEEEEEcc--CCChHHHHHHHHHHHHHHHcCCEEEEeCCCcC---------CHHHHHHHHHHHHHhCCCEEEEcCCCH
Confidence 3578888533 33344 45666666555555544333221111 111212222322 5899999987432
Q ss_pred CCchhHHHHHHHHHHHcCCCEEEE
Q 007496 374 NRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 374 ~rg~eg~i~aik~are~~iP~LGI 397 (601)
. . ....++.+.+.++|+.-+
T Consensus 73 ~-~---~~~~~~~~~~~~iPvV~~ 92 (305)
T 3g1w_A 73 V-E---LTDTINKAVDAGIPIVLF 92 (305)
T ss_dssp T-T---THHHHHHHHHTTCCEEEE
T ss_pred H-H---HHHHHHHHHHCCCcEEEE
Confidence 2 1 224567777889998654
No 147
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=54.28 E-value=11 Score=36.90 Aligned_cols=39 Identities=21% Similarity=0.400 Sum_probs=31.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (601)
|+.|+++|. +|-||...|..+...|...|+.+..+-.|.
T Consensus 4 ~~lIvl~G~--pGSGKSTla~~La~~L~~~g~~~i~~~~D~ 42 (260)
T 3a4m_A 4 IMLIILTGL--PGVGKSTFSKNLAKILSKNNIDVIVLGSDL 42 (260)
T ss_dssp CEEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEECTHH
T ss_pred CEEEEEEcC--CCCCHHHHHHHHHHHHHhCCCEEEEECchH
Confidence 578999997 899999999999999998998775433343
No 148
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=54.03 E-value=15 Score=37.13 Aligned_cols=40 Identities=30% Similarity=0.502 Sum_probs=35.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (601)
+.|.++| .+|.||=.+++.++.+|...|.+|..+-.|||-
T Consensus 99 ~vi~i~G--~~G~GKTT~~~~la~~~~~~g~~v~l~~~D~~r 138 (297)
T 1j8m_F 99 YVIMLVG--VQGTGKTTTAGKLAYFYKKKGFKVGLVGADVYR 138 (297)
T ss_dssp EEEEEEC--SSCSSTTHHHHHHHHHHHHTTCCEEEEECCCSS
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 4677775 499999999999999999999999999999974
No 149
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=53.43 E-value=14 Score=34.14 Aligned_cols=34 Identities=21% Similarity=0.298 Sum_probs=29.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
+.|++||+ +|-||...|.-+...|...|++|...
T Consensus 10 ~~I~l~G~--~GsGKsT~~~~L~~~l~~~~~~v~~~ 43 (215)
T 1nn5_A 10 ALIVLEGV--DRAGKSTQSRKLVEALCAAGHRAELL 43 (215)
T ss_dssp CEEEEEES--TTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEECC--CCCCHHHHHHHHHHHHHHcCCcEEEe
Confidence 47999996 78899999999999999999998543
No 150
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=53.31 E-value=50 Score=32.27 Aligned_cols=85 Identities=12% Similarity=0.034 Sum_probs=44.4
Q ss_pred ceEEEEEcccCCCcchH-HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCCC
Q 007496 297 PVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFG 373 (601)
Q Consensus 297 ~v~IalVGkY~~l~DaY-~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGfG 373 (601)
..+||++-. ...+.| ..+.+.++.+..+.+..+.+...+. +++.-.+..+.+ .++|||++.+-..
T Consensus 3 ~~~Igvi~~--~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~----------~~~~~~~~i~~~~~~~vdgiIi~~~~~ 70 (330)
T 3uug_A 3 KGSVGIAMP--TKSSARWIDDGNNIVKQLQEAGYKTDLQYADD----------DIPNQLSQIENMVTKGVKVLVIASIDG 70 (330)
T ss_dssp CCEEEEEEC--CSSSTHHHHHHHHHHHHHHHTTCEEEEEECTT----------CHHHHHHHHHHHHHHTCSEEEECCSSG
T ss_pred CcEEEEEeC--CCcchHHHHHHHHHHHHHHHcCCEEEEeeCCC----------CHHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 457888843 233344 4555555555544444443333211 111111112222 5899999987321
Q ss_pred CCchhHHHHHHHHHHHcCCCEEEE
Q 007496 374 NRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 374 ~rg~eg~i~aik~are~~iP~LGI 397 (601)
......++.+.+.++|+.-+
T Consensus 71 ----~~~~~~~~~~~~~giPvV~~ 90 (330)
T 3uug_A 71 ----TTLSDVLKQAGEQGIKVIAY 90 (330)
T ss_dssp ----GGGHHHHHHHHHTTCEEEEE
T ss_pred ----hhHHHHHHHHHHCCCCEEEE
Confidence 22234567777888998654
No 151
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=52.53 E-value=13 Score=32.96 Aligned_cols=38 Identities=13% Similarity=0.057 Sum_probs=30.7
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEehhHHHH
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVA 404 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGICLGmQll 404 (601)
.++.+|++..||-+ -++++.|+++++.++|=|+|+++-
T Consensus 81 ~g~k~v~~~~G~~~------~e~~~~a~~~Girvv~nC~gv~l~ 118 (122)
T 3ff4_A 81 LKPKRVIFNPGTEN------EELEEILSENGIEPVIGCTLVMLS 118 (122)
T ss_dssp HCCSEEEECTTCCC------HHHHHHHHHTTCEEEESCHHHHHH
T ss_pred cCCCEEEECCCCCh------HHHHHHHHHcCCeEECCcCeEEec
Confidence 36678888888743 267888999999999999999875
No 152
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=51.90 E-value=9.5 Score=36.09 Aligned_cols=32 Identities=28% Similarity=0.424 Sum_probs=24.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
||.++||||- +|||+. +.+.|..+|++|...-
T Consensus 2 ~k~vlITGas-~gIG~~-----ia~~l~~~G~~V~~~~ 33 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEA-----IARALARDGYALALGA 33 (235)
T ss_dssp CCEEEEESCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 6889999985 777764 4566777899887653
No 153
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=51.77 E-value=67 Score=30.85 Aligned_cols=32 Identities=9% Similarity=-0.005 Sum_probs=21.4
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGIC 398 (601)
.++||||+.+...+ . ..++.+.+.++|+.-+.
T Consensus 66 ~~vdgiIi~~~~~~---~---~~~~~l~~~~iPvV~~~ 97 (290)
T 2rgy_A 66 RDCDGVVVISHDLH---D---EDLDELHRMHPKMVFLN 97 (290)
T ss_dssp TTCSEEEECCSSSC---H---HHHHHHHHHCSSEEEES
T ss_pred cCccEEEEecCCCC---H---HHHHHHhhcCCCEEEEc
Confidence 58999999874322 1 24555666789987664
No 154
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=51.48 E-value=52 Score=31.42 Aligned_cols=31 Identities=23% Similarity=0.376 Sum_probs=21.4
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGI 397 (601)
.++||||+.+...+. ..++.+.+.++|+.-+
T Consensus 68 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~~ 98 (292)
T 3k4h_A 68 RQIGGIILLYSREND------RIIQYLHEQNFPFVLI 98 (292)
T ss_dssp TCCCEEEESCCBTTC------HHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEeCCCCCh------HHHHHHHHCCCCEEEE
Confidence 589999997743221 3566677788998654
No 155
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=51.46 E-value=17 Score=34.93 Aligned_cols=35 Identities=23% Similarity=0.416 Sum_probs=31.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
++|++.|. +|-||+..+.-+...|+.+|++|...+
T Consensus 7 ~~i~~eG~--~gsGKsT~~~~l~~~l~~~~~~v~~~~ 41 (213)
T 4edh_A 7 LFVTLEGP--EGAGKSTNRDYLAERLRERGIEVQLTR 41 (213)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred eEEEEEcC--CCCCHHHHHHHHHHHHHHcCCCccccc
Confidence 68999984 899999999999999999999986554
No 156
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=51.19 E-value=13 Score=35.77 Aligned_cols=78 Identities=17% Similarity=0.255 Sum_probs=53.4
Q ss_pred EEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHHHHHHHHhhHcCCCCEEEEeeeeeeeecCCCc
Q 007496 112 QVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGE 191 (601)
Q Consensus 112 qviphit~~i~~~i~~~~~~~~d~~~~~~dv~i~e~ggtvgdies~pf~ea~rq~~~~~g~~n~~~ih~~~vp~~~~~~e 191 (601)
.|||-|.|+ +.++++- ..++++|++ ++|+++.+. +.+.+++. .| ...|||+.++--|+
T Consensus 11 piI~Avr~~--~~l~~al-------~s~~~~ifl-l~g~i~~l~-----~~v~~lk~-~~--K~v~Vh~Dli~Gls---- 68 (192)
T 3kts_A 11 SIIPAAHNQ--KDMEKIL-------ELDLTYMVM-LETHVAQLK-----ALVKYAQA-GG--KKVLLHADLVNGLK---- 68 (192)
T ss_dssp CEEEEESSS--HHHHHHT-------TSSCCEEEE-CSEETTTHH-----HHHHHHHH-TT--CEEEEEGGGEETCC----
T ss_pred CEEEEecCH--HHHHHHH-------cCCCCEEEE-ecCcHHHHH-----HHHHHHHH-cC--CeEEEecCchhccC----
Confidence 578877664 3355553 345788888 888776654 44555544 33 48999999998773
Q ss_pred cccCCccchhhhhhcCCCcccEEEE
Q 007496 192 QKTKPTQHSVRGLRGQGLTPNILAC 216 (601)
Q Consensus 192 ~ktkptq~sv~~Lrs~Gi~pd~iv~ 216 (601)
+-+.++.-|. .+..||+||-
T Consensus 69 ----~d~~ai~fL~-~~~~pdGIIs 88 (192)
T 3kts_A 69 ----NDDYAIDFLC-TEICPDGIIS 88 (192)
T ss_dssp ----CSHHHHHHHH-HTTCCSEEEE
T ss_pred ----CcHHHHHHHH-hCCCCCEEEe
Confidence 4567888776 4889999874
No 157
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=50.20 E-value=43 Score=32.41 Aligned_cols=85 Identities=14% Similarity=0.157 Sum_probs=43.7
Q ss_pred CceEEEEEcccC--CCcchH-HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECC
Q 007496 296 EPVRIAMVGKYT--GLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPG 370 (601)
Q Consensus 296 ~~v~IalVGkY~--~l~DaY-~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpG 370 (601)
+.-+||++=... ...+.| ..+++.++.+..+.+..+.+.+.+.. +. . ....+.+ .++||||+.+
T Consensus 5 ~s~~Igvi~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~--~~------~---~~~~~~l~~~~vdGiIi~~ 73 (294)
T 3qk7_A 5 RTDAIALAYPSRPRVLNNSTFLEMISWIGIELGKRGLDLLLIPDEPG--EK------Y---QSLIHLVETRRVDALIVAH 73 (294)
T ss_dssp CCCEEEEEEESCSGGGSCHHHHHHHHHHHHHHHHTTCEEEEEEECTT--CC------C---HHHHHHHHHTCCSEEEECS
T ss_pred ccceEEEEecCCCccccChhHHHHHHHHHHHHHHCCCEEEEEeCCCh--hh------H---HHHHHHHHcCCCCEEEEeC
Confidence 345788874210 233344 35555555554444444444443321 10 0 0112333 4899999987
Q ss_pred CCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 371 GFGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 371 GfG~rg~eg~i~aik~are~~iP~LGI 397 (601)
...+. ..++.+.+.++|+.-+
T Consensus 74 ~~~~~------~~~~~l~~~~iPvV~~ 94 (294)
T 3qk7_A 74 TQPED------FRLQYLQKQNFPFLAL 94 (294)
T ss_dssp CCSSC------HHHHHHHHTTCCEEEE
T ss_pred CCCCh------HHHHHHHhCCCCEEEE
Confidence 53322 3466677778998655
No 158
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=50.19 E-value=13 Score=39.01 Aligned_cols=39 Identities=23% Similarity=0.219 Sum_probs=33.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (601)
|+++|++| -.|.||=.+|++++..|..+|.||-.+-. |-
T Consensus 2 ~~i~~~~g--kGG~GKTt~a~~la~~la~~g~~vllvd~-~~ 40 (374)
T 3igf_A 2 ALILTFLG--KSGVARTKIAIAAAKLLASQGKRVLLAGL-AE 40 (374)
T ss_dssp CEEEEEEC--SBHHHHHHHHHHHHHHHHHTTCCEEEEEC-SC
T ss_pred cEEEEEeC--CCCCcHHHHHHHHHHHHHHCCCCeEEEeC-CC
Confidence 46777776 45999999999999999999999999987 64
No 159
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=49.44 E-value=20 Score=39.28 Aligned_cols=40 Identities=23% Similarity=0.399 Sum_probs=35.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (601)
+.|.++| . .|.||=.+++.|...|+.+|.+|..+-.|||-
T Consensus 102 ~vI~ivG-~-~GvGKTTl~~kLA~~l~~~G~kVllVd~D~~r 141 (504)
T 2j37_W 102 NVIMFVG-L-QGSGKTTTCSKLAYYYQRKGWKTCLICADTFR 141 (504)
T ss_dssp EEEEEEC-S-TTSSHHHHHHHHHHHHHHTTCCEEEEEECCSS
T ss_pred eEEEEEC-C-CCCCHHHHHHHHHHHHHhCCCeEEEEeccccc
Confidence 4577775 4 79999999999999999999999999999974
No 160
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=48.91 E-value=8.9 Score=36.72 Aligned_cols=35 Identities=43% Similarity=0.606 Sum_probs=25.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
||-++||||- ||||+.++- .|++..|.+|...-.+
T Consensus 4 ~k~vlITGas-~gIG~~~a~----~l~~~~g~~v~~~~~~ 38 (244)
T 4e4y_A 4 MANYLVTGGS-KGIGKAVVE----LLLQNKNHTVINIDIQ 38 (244)
T ss_dssp CEEEEEETTT-SHHHHHHHH----HHTTSTTEEEEEEESS
T ss_pred CCeEEEeCCC-ChHHHHHHH----HHHhcCCcEEEEeccc
Confidence 6889999986 888886553 3444488888876544
No 161
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=48.84 E-value=81 Score=30.18 Aligned_cols=88 Identities=11% Similarity=0.038 Sum_probs=44.9
Q ss_pred CceEEEEEcccCCCcchH-HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCC
Q 007496 296 EPVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 372 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY-~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGf 372 (601)
+..+|+++-.. ..+.| ..+.+.++.+..+.+..+. ++.... .+++.-.++.+.+ .++|||++.+.
T Consensus 3 ~~~~Ig~i~~~--~~~~~~~~~~~g~~~~~~~~g~~~~--~~~~~~-------~~~~~~~~~~~~l~~~~vdgiii~~~- 70 (303)
T 3d02_A 3 AEKTVVNISKV--DGMPWFNRMGEGVVQAGKEFNLNAS--QVGPSS-------TDAPQQVKIIEDLIARKVDAITIVPN- 70 (303)
T ss_dssp -CEEEEEECSC--SSCHHHHHHHHHHHHHHHHTTEEEE--EECCSS-------SCHHHHHHHHHHHHHTTCSEEEECCS-
T ss_pred CceEEEEEecc--CCChHHHHHHHHHHHHHHHcCCEEE--EECCCC-------CCHHHHHHHHHHHHHcCCCEEEEecC-
Confidence 35689998432 23344 4556665555444444332 222111 1122212222333 58999999763
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEEe
Q 007496 373 GNRGVQGKILAAKYAREHRIPYLGIC 398 (601)
Q Consensus 373 G~rg~eg~i~aik~are~~iP~LGIC 398 (601)
+ .......++.+.+.++|+.-+.
T Consensus 71 -~--~~~~~~~~~~~~~~~ipvV~~~ 93 (303)
T 3d02_A 71 -D--ANVLEPVFKKARDAGIVVLTNE 93 (303)
T ss_dssp -C--HHHHHHHHHHHHHTTCEEEEES
T ss_pred -C--hHHHHHHHHHHHHCCCeEEEEe
Confidence 1 1223345677778899987653
No 162
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=48.31 E-value=51 Score=31.67 Aligned_cols=86 Identities=14% Similarity=0.137 Sum_probs=45.4
Q ss_pred CceEEEEEcccCCC-cchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCC
Q 007496 296 EPVRIAMVGKYTGL-SDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 372 (601)
Q Consensus 296 ~~v~IalVGkY~~l-~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGf 372 (601)
+.-+||++=..... ..-|..+++.++.+..+.+..+.+...+.+. + .-....+.+ .++||||+.+..
T Consensus 7 ~s~~Igvv~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~-~---------~~~~~~~~l~~~~vdgiIi~~~~ 76 (288)
T 3gv0_A 7 KTNVIALVLSVDEELMGFTSQMVFGITEVLSTTQYHLVVTPHIHAK-D---------SMVPIRYILETGSADGVIISKIE 76 (288)
T ss_dssp CCCEEEEECBCCCCSSCHHHHHHHHHHHHHTTSSCEEEECCBSSGG-G---------TTHHHHHHHHHTCCSEEEEESCC
T ss_pred CCCEEEEEecCCccccHHHHHHHHHHHHHHHHcCCEEEEecCCcch-h---------HHHHHHHHHHcCCccEEEEecCC
Confidence 44678888432211 1234567777776666665554443322211 0 001122223 689999997632
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 373 GNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 373 G~rg~eg~i~aik~are~~iP~LGI 397 (601)
... ..++.+.+.++|+.-+
T Consensus 77 ~~~------~~~~~l~~~~iPvV~i 95 (288)
T 3gv0_A 77 PND------PRVRFMTERNMPFVTH 95 (288)
T ss_dssp TTC------HHHHHHHHTTCCEEEE
T ss_pred CCc------HHHHHHhhCCCCEEEE
Confidence 221 3456667788998654
No 163
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=48.13 E-value=16 Score=32.89 Aligned_cols=34 Identities=26% Similarity=0.341 Sum_probs=27.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
++|+++|. +|-||...+..|...|...|++...+
T Consensus 4 ~~I~i~G~--~GsGKsT~~~~L~~~l~~~g~~~~~i 37 (192)
T 1kht_A 4 KVVVVTGV--PGVGSTTSSQLAMDNLRKEGVNYKMV 37 (192)
T ss_dssp CEEEEECC--TTSCHHHHHHHHHHHHHTTTCCCEEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhcCcceEEE
Confidence 48999995 89999999999999888877544333
No 164
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=48.11 E-value=94 Score=29.13 Aligned_cols=83 Identities=16% Similarity=0.235 Sum_probs=42.0
Q ss_pred eEEEEEcccCCCcchHH-HHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCCCC
Q 007496 298 VRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGN 374 (601)
Q Consensus 298 v~IalVGkY~~l~DaY~-SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGfG~ 374 (601)
-+||++-. ...+.|. .+++.++.+..+.+..+.+...+. +++.-.+..+.+ .++||||+.+....
T Consensus 3 ~~Igvi~~--~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~----------~~~~~~~~~~~l~~~~vdgiIi~~~~~~ 70 (272)
T 3o74_A 3 RTLGFILP--DLENPSYARIAKQLEQGARARGYQLLIASSDD----------QPDSERQLQQLFRARRCDALFVASCLPP 70 (272)
T ss_dssp CEEEEEES--CTTCHHHHHHHHHHHHHHHHTTCEEEEEECTT----------CHHHHHHHHHHHHHTTCSEEEECCCCCS
T ss_pred eEEEEEeC--CCcChhHHHHHHHHHHHHHHCCCEEEEEeCCC----------CHHHHHHHHHHHHHcCCCEEEEecCccc
Confidence 46888732 3344443 555555555444444443333221 111111122223 58999999875322
Q ss_pred CchhHHHHHHHHHHHcCCCEEEE
Q 007496 375 RGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 375 rg~eg~i~aik~are~~iP~LGI 397 (601)
. . ..++.+.+.++|+.-+
T Consensus 71 -~-~---~~~~~~~~~~iPvV~~ 88 (272)
T 3o74_A 71 -E-D---DSYRELQDKGLPVIAI 88 (272)
T ss_dssp -S-C---CHHHHHHHTTCCEEEE
T ss_pred -c-H---HHHHHHHHcCCCEEEE
Confidence 1 1 2355666778998644
No 165
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=48.01 E-value=13 Score=32.37 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=26.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (601)
+.|+|+|+ |-+..++...|..+|++|..+-.||
T Consensus 7 ~~v~I~G~-------G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGS-------EAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECC-------SHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECC-------CHHHHHHHHHHHHCCCeEEEEECCH
Confidence 45777775 4477889999999999999887664
No 166
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=47.77 E-value=12 Score=35.86 Aligned_cols=33 Identities=30% Similarity=0.470 Sum_probs=24.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
+|-++||||- +|||+.+ .+.|..+|++|...-.
T Consensus 3 ~k~vlVTGas-~GIG~a~-----a~~l~~~G~~V~~~~r 35 (235)
T 3l6e_A 3 LGHIIVTGAG-SGLGRAL-----TIGLVERGHQVSMMGR 35 (235)
T ss_dssp CCEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CCEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEEC
Confidence 4789999986 7888754 4567788998877633
No 167
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=47.76 E-value=10 Score=35.87 Aligned_cols=31 Identities=26% Similarity=0.544 Sum_probs=23.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
||.|+||||- +|||+.++ +.|..+|++|..+
T Consensus 1 ~k~vlITGas-ggiG~~~a-----~~l~~~G~~v~~~ 31 (245)
T 2ph3_A 1 MRKALITGAS-RGIGRAIA-----LRLAEDGFALAIH 31 (245)
T ss_dssp CCEEEETTTT-SHHHHHHH-----HHHHTTTCEEEEE
T ss_pred CCEEEEeCCC-chHHHHHH-----HHHHHCCCEEEEE
Confidence 6889999994 78887554 5566688877654
No 168
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=47.63 E-value=42 Score=32.23 Aligned_cols=87 Identities=15% Similarity=0.093 Sum_probs=44.2
Q ss_pred CceEEEEEcccCCCcchHH-HHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCC
Q 007496 296 EPVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 372 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY~-SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGf 372 (601)
++.+||++- ....+.|. .+++.++.+..+.+..+.+...+.. .+++...+..+.+ .++||||+.+..
T Consensus 4 ~~~~Igvi~--~~~~~~~~~~~~~g~~~~a~~~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~vdgiii~~~~ 73 (304)
T 3o1i_D 4 SDEKICAIY--PHLKDSYWLSVNYGMVSEAEKQGVNLRVLEAGGY--------PNKSRQEQQLALCTQWGANAIILGTVD 73 (304)
T ss_dssp -CCEEEEEE--SCSCSHHHHHHHHHHHHHHHHHTCEEEEEECSST--------TCHHHHHHHHHHHHHHTCSEEEECCSS
T ss_pred CCcEEEEEe--CCCCCcHHHHHHHHHHHHHHHcCCeEEEEcCCCC--------CCHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 456899883 23444543 5666666555555554444333221 0111111122222 589999998743
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 373 GNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 373 G~rg~eg~i~aik~are~~iP~LGI 397 (601)
.+ ... ..++.+. .++|+.-+
T Consensus 74 ~~-~~~---~~~~~~~-~~iPvV~~ 93 (304)
T 3o1i_D 74 PH-AYE---HNLKSWV-GNTPVFAT 93 (304)
T ss_dssp TT-SST---TTHHHHT-TTSCEEEC
T ss_pred hh-HHH---HHHHHHc-CCCCEEEe
Confidence 22 111 1355566 78998766
No 169
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=47.17 E-value=93 Score=29.59 Aligned_cols=33 Identities=30% Similarity=0.413 Sum_probs=21.6
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGI 397 (601)
.++||||+.+...+ .. ...++.+++.++|+.-+
T Consensus 57 ~~vdgiI~~~~~~~-~~---~~~~~~~~~~~iPvV~~ 89 (290)
T 2fn9_A 57 AGYDAIIFNPTDAD-GS---IANVKRAKEAGIPVFCV 89 (290)
T ss_dssp TTCSEEEECCSCTT-TT---HHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEecCChH-HH---HHHHHHHHHCCCeEEEE
Confidence 58999999864321 11 23466677788998754
No 170
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=47.04 E-value=18 Score=33.42 Aligned_cols=34 Identities=32% Similarity=0.426 Sum_probs=24.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (601)
|| |+||||- |-+.+.+-..|.++|++|..+--+|
T Consensus 1 Mk-ilVtGat------G~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 1 MK-IAVLGAT------GRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CE-EEEEcCC------CHHHHHHHHHHHHCCCEEEEEEecc
Confidence 78 9999974 4444566677778899998876554
No 171
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=47.00 E-value=94 Score=29.83 Aligned_cols=32 Identities=22% Similarity=0.255 Sum_probs=20.9
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGIC 398 (601)
.++||||+.+.... . ..++.+.+.++|+.-+.
T Consensus 71 ~~vdgiIi~~~~~~---~---~~~~~l~~~~iPvV~~~ 102 (289)
T 2fep_A 71 KQVDGIVFMGGNIT---D---EHVAEFKRSPVPIVLAA 102 (289)
T ss_dssp TTCSEEEECCSCCC---H---HHHHHHHHSSSCEEEES
T ss_pred CCCCEEEEecCCCC---H---HHHHHHHhcCCCEEEEc
Confidence 58999999774221 1 23555667789987653
No 172
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=46.86 E-value=21 Score=32.74 Aligned_cols=34 Identities=32% Similarity=0.313 Sum_probs=24.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (601)
|| |+||||- |-+.+.+-..|..+|++|..+--+|
T Consensus 1 Mk-vlVtGat------G~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MK-IGIIGAT------GRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred Ce-EEEEcCC------chhHHHHHHHHHhCCCEEEEEEcCc
Confidence 67 8999974 4444566667788899999876553
No 173
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=46.83 E-value=14 Score=32.70 Aligned_cols=25 Identities=20% Similarity=0.251 Sum_probs=19.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHH
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLL 27 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll 27 (601)
|+.|+++|+ ||-||..+|.-|...|
T Consensus 1 M~~i~l~G~--~GsGKsT~~~~L~~~l 25 (173)
T 3kb2_A 1 MTLIILEGP--DCCFKSTVAAKLSKEL 25 (173)
T ss_dssp -CEEEEECS--SSSSHHHHHHHHHHHH
T ss_pred CeEEEEECC--CCCCHHHHHHHHHHHh
Confidence 788999995 8999988877766544
No 174
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=46.73 E-value=14 Score=35.37 Aligned_cols=31 Identities=29% Similarity=0.278 Sum_probs=23.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
+|-++||||- +|||+.++ +.|..+|++|...
T Consensus 1 ~k~vlVTGas-~gIG~~ia-----~~l~~~G~~V~~~ 31 (244)
T 1zmo_A 1 MVIALVTHAR-HFAGPAAV-----EALTQDGYTVVCH 31 (244)
T ss_dssp -CEEEESSTT-STTHHHHH-----HHHHHTTCEEEEC
T ss_pred CCEEEEECCC-ChHHHHHH-----HHHHHCCCEEEEe
Confidence 5789999985 89998654 4566789887654
No 175
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=46.22 E-value=8.2 Score=38.55 Aligned_cols=36 Identities=25% Similarity=0.346 Sum_probs=25.9
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHc--CCCEEEEehhH
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREH--RIPYLGICLGM 401 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~--~iP~LGICLGm 401 (601)
.++|.|++-||=| -++.+++.+... ++|+|||=+|.
T Consensus 34 ~~~D~vv~lGGDG-----T~l~aa~~~~~~~~~~PilGIn~G~ 71 (272)
T 2i2c_A 34 VEPEIVISIGGDG-----TFLSAFHQYEERLDEIAFIGIHTGH 71 (272)
T ss_dssp SSCSEEEEEESHH-----HHHHHHHHTGGGTTTCEEEEEESSS
T ss_pred CCCCEEEEEcCcH-----HHHHHHHHHhhcCCCCCEEEEeCCC
Confidence 3679999999732 245567776654 89999997764
No 176
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=45.44 E-value=22 Score=38.09 Aligned_cols=57 Identities=18% Similarity=0.235 Sum_probs=39.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEecCC
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDG 64 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg 64 (601)
|.|-||| +=||+.|++=|+.+|++.|++.+. ++.--+| +.|...-.+..+++|++=|
T Consensus 119 ~vI~VTG----TnGKTTTt~ml~~iL~~~G~~p~~-~igg~~~-~~~~~~~~~~~d~~VlE~~ 175 (475)
T 1p3d_A 119 HGIAVAG----THGKTTTTAMISMIYTQAKLDPTF-VNGGLVK-SAGKNAHLGASRYLIAEAD 175 (475)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCCEE-EEEEEET-TTTEEEECCSSSEEEEECC
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHhCCCCCEE-EECCccc-ccccccccCCCCEEEEEec
Confidence 6788888 469999999999999999998542 3333333 3332111234588998876
No 177
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=45.38 E-value=25 Score=37.19 Aligned_cols=55 Identities=31% Similarity=0.491 Sum_probs=40.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCcc-----ccceEEEecCCccccCC
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPF-----EHGEVFVLDDGGEVDLD 70 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~-----~hgevfv~~dg~e~dld 70 (601)
|.|-||| +=||+.|++-|..+|++.|++|...- |+ | .|+ +.++++|++=|. -+||
T Consensus 105 ~vI~VTG----TnGKTTT~~ml~~iL~~~g~~~~~~g-----ni--g--~~~~~~~~~~~d~~VlE~~~-~~l~ 164 (439)
T 2x5o_A 105 PIVAITG----SNGKSTVTTLVGEMAKAAGVNVGVGG-----NI--G--LPALMLLDDECELYVLELSS-FQLE 164 (439)
T ss_dssp CEEEEEC----SSSHHHHHHHHHHHHHHTTCCEEEEE-----SS--S--BCHHHHCCTTCCEEEEECCH-HHHH
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHhcCCCEEEec-----cc--C--HHHHHHhCCCCCEEEEECCc-hhhc
Confidence 5788888 46999999999999999999987542 32 1 122 456899988664 4444
No 178
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=45.08 E-value=34 Score=31.56 Aligned_cols=59 Identities=12% Similarity=0.103 Sum_probs=47.1
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEecC
Q 007496 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDD 63 (601)
Q Consensus 3 ~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~d 63 (601)
-++++|- +|.||=.+|..++..+...|++|..+..+.+.+.-...+.-+....|.++||
T Consensus 54 ~~ll~G~--~G~GKT~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vliiDe 112 (242)
T 3bos_A 54 AIYLWGP--VKSGRTHLIHAACARANELERRSFYIPLGIHASISTALLEGLEQFDLICIDD 112 (242)
T ss_dssp EEEEECS--TTSSHHHHHHHHHHHHHHTTCCEEEEEGGGGGGSCGGGGTTGGGSSEEEEET
T ss_pred eEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHHHHHhccCCCEEEEec
Confidence 4778886 6999999999999999999999999888777655444455556667888887
No 179
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=44.96 E-value=22 Score=32.65 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=29.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
+.|++||+ +|-||...+.-+...|...+++|..+
T Consensus 11 ~~I~l~G~--~GsGKST~~~~L~~~l~~~~~~~~~~ 44 (212)
T 2wwf_A 11 KFIVFEGL--DRSGKSTQSKLLVEYLKNNNVEVKHL 44 (212)
T ss_dssp CEEEEEES--TTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEEcC--CCCCHHHHHHHHHHHHHHcCCcEEEE
Confidence 57999997 68899999999999999999988543
No 180
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=44.67 E-value=13 Score=35.79 Aligned_cols=31 Identities=39% Similarity=0.534 Sum_probs=23.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
||.++||||- +|||+. +.+.|-.+|++|...
T Consensus 7 ~k~vlVTGas-~gIG~~-----~a~~l~~~G~~v~~~ 37 (264)
T 3i4f_A 7 VRHALITAGT-KGLGKQ-----VTEKLLAKGYSVTVT 37 (264)
T ss_dssp CCEEEETTTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred cCEEEEeCCC-chhHHH-----HHHHHHHCCCEEEEE
Confidence 5889999985 777764 456677789887764
No 181
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=44.42 E-value=69 Score=31.07 Aligned_cols=33 Identities=21% Similarity=0.229 Sum_probs=22.2
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGI 397 (601)
.++|||++.+...+. . ...++.+++.++|+.-+
T Consensus 57 ~~vdgiIi~~~~~~~-~---~~~~~~~~~~~iPvV~~ 89 (313)
T 3m9w_A 57 RGVDVLVIIPYNGQV-L---SNVVKEAKQEGIKVLAY 89 (313)
T ss_dssp TTCSEEEEECSSTTS-C---HHHHHHHHTTTCEEEEE
T ss_pred cCCCEEEEeCCChhh-h---HHHHHHHHHCCCeEEEE
Confidence 589999998743221 1 24567777888998654
No 182
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=44.40 E-value=15 Score=36.57 Aligned_cols=89 Identities=21% Similarity=0.151 Sum_probs=47.5
Q ss_pred eEEEEEcccCC--CcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCC
Q 007496 298 VRIAMVGKYTG--LSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 375 (601)
Q Consensus 298 v~IalVGkY~~--l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~r 375 (601)
.||+++.+... .......+.+.|+..|+++.+. ...++.+..... + .+ .......++|.|++-||=|
T Consensus 6 kki~ii~np~~~~~~~~~~~i~~~l~~~g~~v~~~----~~~~~~~~~~~~---~-~~-~~~~~~~~~D~vi~~GGDG-- 74 (292)
T 2an1_A 6 KCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVE----QQIAHELQLKNV---P-TG-TLAEIGQQADLAVVVGGDG-- 74 (292)
T ss_dssp CEEEEECC-------CHHHHHHHHHHHTTCEEEEE----HHHHHHTTCSSC---C-EE-CHHHHHHHCSEEEECSCHH--
T ss_pred cEEEEEEcCCCHHHHHHHHHHHHHHHHCCCEEEEe----cchhhhcccccc---c-cc-chhhcccCCCEEEEEcCcH--
Confidence 36888865432 2233457888899888764321 111111100000 0 00 0011224789999999733
Q ss_pred chhHHHHHHHHHHHcCCCEEEEehh
Q 007496 376 GVQGKILAAKYAREHRIPYLGICLG 400 (601)
Q Consensus 376 g~eg~i~aik~are~~iP~LGICLG 400 (601)
-+..+++.+.+.++|+|||=+|
T Consensus 75 ---T~l~a~~~~~~~~~P~lGI~~G 96 (292)
T 2an1_A 75 ---NMLGAARTLARYDINVIGINRG 96 (292)
T ss_dssp ---HHHHHHHHHTTSSCEEEEBCSS
T ss_pred ---HHHHHHHHhhcCCCCEEEEECC
Confidence 2556677777778999999655
No 183
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=44.22 E-value=11 Score=35.51 Aligned_cols=33 Identities=24% Similarity=0.307 Sum_probs=25.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
|-++||||- +|||+.++ +.|..+|++|...-.+
T Consensus 7 k~vlVTGas-~gIG~~~a-----~~l~~~G~~V~~~~r~ 39 (223)
T 3uce_A 7 TVYVVLGGT-SGIGAELA-----KQLESEHTIVHVASRQ 39 (223)
T ss_dssp EEEEEETTT-SHHHHHHH-----HHHCSTTEEEEEESGG
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEecCC
Confidence 789999986 88888665 5677789988876444
No 184
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=44.01 E-value=21 Score=32.37 Aligned_cols=39 Identities=33% Similarity=0.344 Sum_probs=33.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (601)
++|+++|- +|-||-..+..+...|...|++|..+..|.+
T Consensus 14 ~~i~l~G~--~GsGKsT~~~~L~~~l~~~~~~~~~~~~d~~ 52 (186)
T 2yvu_A 14 IVVWLTGL--PGSGKTTIATRLADLLQKEGYRVEVLDGDWA 52 (186)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEEEHHHH
T ss_pred cEEEEEcC--CCCCHHHHHHHHHHHHHhcCCeEEEeeHHHH
Confidence 57888885 8999999999999999999999888766654
No 185
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=43.44 E-value=17 Score=35.00 Aligned_cols=34 Identities=26% Similarity=0.406 Sum_probs=25.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (601)
|.|+||||- +|||+. +.+.|..+|++|..+-.++
T Consensus 23 k~vlITGas-~gIG~~-----la~~l~~~G~~V~~~~r~~ 56 (251)
T 3orf_A 23 KNILVLGGS-GALGAE-----VVKFFKSKSWNTISIDFRE 56 (251)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeCCc
Confidence 789999996 777764 5567778899998875543
No 186
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=43.43 E-value=86 Score=30.44 Aligned_cols=34 Identities=26% Similarity=0.294 Sum_probs=22.4
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGIC 398 (601)
.++||||+.+...+ . ....++.+.+.++|+.-+.
T Consensus 56 ~~vdgiIi~~~~~~-~---~~~~~~~~~~~~iPvV~~~ 89 (313)
T 2h3h_A 56 EGVNGIAIAPSDPT-A---VIPTIKKALEMGIPVVTLD 89 (313)
T ss_dssp TTCSEEEECCSSTT-T---THHHHHHHHHTTCCEEEES
T ss_pred cCCCEEEEeCCChH-H---HHHHHHHHHHCCCeEEEeC
Confidence 58999999764321 1 1235666777899987653
No 187
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=43.25 E-value=31 Score=37.02 Aligned_cols=38 Identities=24% Similarity=0.215 Sum_probs=31.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln 44 (601)
|.|-||| +=||+.|++=|+.+|++.|++++. .+-|.+|
T Consensus 115 ~vI~VTG----TnGKTTTt~ml~~iL~~~G~~~~~-~~~g~~~ 152 (469)
T 1j6u_A 115 EEFAVTG----TDGKTTTTAMVAHVLKHLRKSPTV-FLGGIMD 152 (469)
T ss_dssp CEEEEEC----SSSHHHHHHHHHHHHHHTTCCCEE-ECSSCCT
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHHcCCCceE-EECCeec
Confidence 5788888 469999999999999999999853 4566654
No 188
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=43.07 E-value=25 Score=37.87 Aligned_cols=57 Identities=19% Similarity=0.332 Sum_probs=39.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEecCC
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDG 64 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg 64 (601)
|.|-||| +=||+.|++=|+.+|++.|++.+. ++.--+| +.|...-.+..+++|++=|
T Consensus 120 ~vI~VTG----TnGKTTTt~ml~~iL~~~G~~p~~-~igg~~~-~~~~~~~~~~~d~~VlE~~ 176 (491)
T 2f00_A 120 HGIAIAG----THGKTTTTAMVSSIYAEAGLDPTF-VNGGLVK-AAGVHARLGHGRYLIAEAD 176 (491)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCCEE-EEEEEET-TTTEEEECCSSSEEEEECC
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHhCCCCCEE-EECCeec-cccccccCCCCCEEEEEeC
Confidence 6788888 469999999999999999998542 3333333 2332111234588998876
No 189
>1w78_A FOLC bifunctional protein; DHFS, dihydrofolate synthase, synthase, ATP-binding, folate biosynthesis, ligase, multifunctional enzyme; HET: KCX PD8 ADP; 1.82A {Escherichia coli} PDB: 1w7k_A*
Probab=42.76 E-value=24 Score=37.04 Aligned_cols=32 Identities=31% Similarity=0.436 Sum_probs=28.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.|-|||- =|||.|++=|..+|++.|++|...
T Consensus 50 ~vI~VTGT----nGKtTT~~~l~~iL~~~G~~~g~~ 81 (422)
T 1w78_A 50 FVFTVAGT----NGKGTTCRTLESILMAAGYKVGVY 81 (422)
T ss_dssp EEEEEECS----SCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEeCC----cChHHHHHHHHHHHHHCCCCEEEE
Confidence 67888884 699999999999999999998765
No 190
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=42.52 E-value=1.9e+02 Score=25.97 Aligned_cols=93 Identities=11% Similarity=0.063 Sum_probs=51.7
Q ss_pred HHHHHHHHHhcCCCCceEEEEEcccCCCcchHH---HHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHH
Q 007496 282 KEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYL---SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWK 358 (601)
Q Consensus 282 ~~w~~l~~~~~~~~~~v~IalVGkY~~l~DaY~---SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~ 358 (601)
+.+.++++.+.+.. +|-++| .+. ++. .....|.+.|..+.. +... +..+.....
T Consensus 27 ~~l~~~~~~i~~a~---~I~i~G-~G~---S~~~a~~~~~~l~~~g~~~~~------~~~~----------~~~~~~~~~ 83 (187)
T 3sho_A 27 EAIEAAVEAICRAD---HVIVVG-MGF---SAAVAVFLGHGLNSLGIRTTV------LTEG----------GSTLTITLA 83 (187)
T ss_dssp HHHHHHHHHHHHCS---EEEEEC-CGG---GHHHHHHHHHHHHHTTCCEEE------ECCC----------THHHHHHHH
T ss_pred HHHHHHHHHHHhCC---EEEEEe-cCc---hHHHHHHHHHHHHhcCCCEEE------ecCC----------chhHHHHHh
Confidence 45666677666542 899998 442 443 334556666655422 2211 111111122
Q ss_pred hccCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEeh
Q 007496 359 LLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICL 399 (601)
Q Consensus 359 ~L~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGICL 399 (601)
.+..=|-+|+-.-.|. ....+.+++.|++++.|+.+|+-
T Consensus 84 ~~~~~d~~i~iS~sG~--t~~~~~~~~~ak~~g~~vi~IT~ 122 (187)
T 3sho_A 84 NLRPTDLMIGVSVWRY--LRDTVAALAGAAERGVPTMALTD 122 (187)
T ss_dssp TCCTTEEEEEECCSSC--CHHHHHHHHHHHHTTCCEEEEES
T ss_pred cCCCCCEEEEEeCCCC--CHHHHHHHHHHHHCCCCEEEEeC
Confidence 3334455444332333 35678899999999999999984
No 191
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=42.33 E-value=33 Score=30.50 Aligned_cols=81 Identities=9% Similarity=0.098 Sum_probs=43.0
Q ss_pred hHhhHHHHhhhhcCCCCCCeeEEc-----ccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcccccc----CcchHHH
Q 007496 91 GKIYQSVIDKERKGDYLGKTVQVV-----PHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDI----ESMPFIE 161 (601)
Q Consensus 91 gkiy~~vi~ker~g~ylg~tvqvi-----phit~~i~~~i~~~~~~~~d~~~~~~dv~i~e~ggtvgdi----es~pf~e 161 (601)
++-|...+.+.=... |..++|+ =.-|....+++.+... ..+||+++|++|+ .|+ ...-|.+
T Consensus 21 ~~~~~~~l~~~l~~~--~~~~~v~n~g~~G~~~~~~~~~~~~~~~------~~~pd~vvi~~G~--ND~~~~~~~~~~~~ 90 (185)
T 3hp4_A 21 EEGWVKLLQDKYDAE--QSDIVLINASISGETSGGALRRLDALLE------QYEPTHVLIELGA--NDGLRGFPVKKMQT 90 (185)
T ss_dssp GGSHHHHHHHHHHHT--TCCEEEEECCCTTCCHHHHHHHHHHHHH------HHCCSEEEEECCH--HHHHTTCCHHHHHH
T ss_pred cccHHHHHHHHHHhc--CCcEEEEECCcCCccHHHHHHHHHHHHh------hcCCCEEEEEeec--ccCCCCcCHHHHHH
Confidence 356666666543222 4556654 1223445555554421 2378999999995 343 2234566
Q ss_pred HHHHHhhHcCCCCEEEEeee
Q 007496 162 ALGQFSYRVGPGNFCLIHVS 181 (601)
Q Consensus 162 a~rq~~~~~g~~n~~~ih~~ 181 (601)
.++++-.++...+.-.|-++
T Consensus 91 ~~~~~i~~~~~~~~~vvl~~ 110 (185)
T 3hp4_A 91 NLTALVKKSQAANAMTALME 110 (185)
T ss_dssp HHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHcCCeEEEEe
Confidence 66666555544443333333
No 192
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=41.66 E-value=16 Score=36.14 Aligned_cols=33 Identities=39% Similarity=0.592 Sum_probs=26.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
|-|+||||- ||||+.+ .+.|-..|.+|...-+|
T Consensus 3 K~vlVTGas-~GIG~ai-----a~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 3 RGVIVTGGG-HGIGKQI-----CLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEecCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 789999994 8999854 56788899999876443
No 193
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=41.62 E-value=15 Score=36.89 Aligned_cols=62 Identities=27% Similarity=0.436 Sum_probs=43.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCC-eeEEee--ecccccCCCCCCCccccceEEEecCCccccCCC
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGL-RVTCIK--IDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDL 71 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~-~v~~~k--~dpyln~d~gtmsp~~hgevfv~~dg~e~dldl 71 (601)
++|+.+.| |+.|+....+|+..|| +|..++ +.-|..-=+.. .+.-.|++||-|+=--++-+|
T Consensus 183 ~IVvyC~~-------G~RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~~~~-~~~w~G~~fVFD~R~~~~~~l 247 (265)
T 4f67_A 183 KIAMFCTG-------GIRCEKTTAYMKELGFEHVYQLHDGILNYLESIPES-ESLWEGKCFVFDDRVAVDQKL 247 (265)
T ss_dssp CEEEECSS-------SHHHHHHHHHHHHHTCSSEEEETTHHHHHHHHSCTT-TCCEEECEECSSTTCEECTTS
T ss_pred eEEEEeCC-------ChHHHHHHHHHHHcCCCCEEEecCHHHHHHHhcCcc-cccccCcceeEcCccccccCH
Confidence 45666643 6778888999999999 587765 44444321122 345679999999988887776
No 194
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=41.38 E-value=16 Score=35.02 Aligned_cols=31 Identities=35% Similarity=0.482 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+.++ +.|..+|++|...-
T Consensus 8 k~~lVTGas-~gIG~aia-----~~l~~~G~~V~~~~ 38 (247)
T 2jah_A 8 KVALITGAS-SGIGEATA-----RALAAEGAAVAIAA 38 (247)
T ss_dssp CEEEEESCS-SHHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEEE
Confidence 789999985 88887654 56777899887753
No 195
>1jbw_A Folylpolyglutamate synthase; FPGS folate AMPPCP ternary complex, ligase; HET: KCX ACQ TMF; 1.85A {Lactobacillus casei} SCOP: c.59.1.2 c.72.2.2 PDB: 1fgs_A* 1jbv_A* 2gca_A 2gc5_A* 2gc6_A* 2gcb_A
Probab=41.07 E-value=24 Score=37.20 Aligned_cols=32 Identities=44% Similarity=0.657 Sum_probs=28.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.|-|||- =|||.|++=|..+|++.|++|...
T Consensus 40 ~vI~VtGT----nGKtTT~~~l~~iL~~~G~~vg~~ 71 (428)
T 1jbw_A 40 RYIHVTGT----NGKGSAANAIAHVLEASGLTVGLY 71 (428)
T ss_dssp CEEEEECS----SCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEECC----CChHHHHHHHHHHHHHCCCCEEEE
Confidence 57888884 699999999999999999998754
No 196
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=40.86 E-value=18 Score=34.90 Aligned_cols=32 Identities=25% Similarity=0.198 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- ||||+. +.+.|-.+|++|...-.
T Consensus 8 k~vlVTGas-~GIG~a-----ia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 8 ATVAVIGAG-DYIGAE-----IAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp CEEEEECCS-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999986 788764 45667778998877543
No 197
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=40.76 E-value=19 Score=35.26 Aligned_cols=31 Identities=23% Similarity=0.390 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+.+ .+.|-.+|++|...=
T Consensus 7 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 37 (274)
T 3e03_A 7 KTLFITGAS-RGIGLAI-----ALRAARDGANVAIAA 37 (274)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred cEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999997 8888755 466777899887653
No 198
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=40.64 E-value=16 Score=34.63 Aligned_cols=32 Identities=28% Similarity=0.441 Sum_probs=24.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- +|||+.+ .+.|-.+|++|...=.
T Consensus 15 k~vlITGas-~gIG~~i-----a~~l~~~G~~V~~~~r 46 (247)
T 3i1j_A 15 RVILVTGAA-RGIGAAA-----ARAYAAHGASVVLLGR 46 (247)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEec
Confidence 789999995 8888754 4667788998877543
No 199
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=40.37 E-value=30 Score=32.08 Aligned_cols=61 Identities=11% Similarity=0.117 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCc-------chHHHHHHHHhhHcCCCCEEEEeeeeeeee
Q 007496 118 TDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIES-------MPFIEALGQFSYRVGPGNFCLIHVSLVPVL 186 (601)
Q Consensus 118 t~~i~~~i~~~~~~~~d~~~~~~dv~i~e~ggtvgdies-------~pf~ea~rq~~~~~g~~n~~~ih~~~vp~~ 186 (601)
|..+..|+.+... ...||+|+|.+|. .|+-. .-+.+-++++.......+.-.|-+|..|.-
T Consensus 63 t~~~l~r~~~~v~------~~~Pd~vvi~~G~--ND~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~iil~~~~P~~ 130 (209)
T 4hf7_A 63 SYQFLLRFREDVI------NLSPALVVINAGT--NDVAENTGAYNEDYTFGNIASMAELAKANKIKVILTSVLPAA 130 (209)
T ss_dssp HHHHHHHHHHHTG------GGCCSEEEECCCH--HHHTTSSSSCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCS
T ss_pred HHHHHHHHHHHHH------hcCCCEEEEEeCC--CcCccccccccHHHHHHHHHHhhHHHhccCceEEEEeeeccC
Confidence 4455666665321 3579999999985 45311 123344555543332344555556666654
No 200
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=40.36 E-value=70 Score=30.98 Aligned_cols=31 Identities=23% Similarity=0.446 Sum_probs=21.2
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGI 397 (601)
.++||||+.+...+. ..++.+.+.++|+.-+
T Consensus 82 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~i 112 (305)
T 3huu_A 82 KSVDGFILLYSLKDD------PIEHLLNEFKVPYLIV 112 (305)
T ss_dssp TCCSEEEESSCBTTC------HHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEeCCcCCc------HHHHHHHHcCCCEEEE
Confidence 589999998743221 3456667788998655
No 201
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=40.05 E-value=19 Score=35.28 Aligned_cols=33 Identities=39% Similarity=0.599 Sum_probs=25.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
|-|+||||- +|||+.+ .+.|..+|.+|...-.+
T Consensus 15 k~vlVTGas-~GIG~ai-----a~~l~~~G~~V~~~~r~ 47 (269)
T 3vtz_A 15 KVAIVTGGS-SGIGLAV-----VDALVRYGAKVVSVSLD 47 (269)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 789999986 7888754 45677889999876443
No 202
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=39.97 E-value=57 Score=31.05 Aligned_cols=33 Identities=24% Similarity=0.164 Sum_probs=21.0
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGI 397 (601)
.++||||+.+...+ .. ...++.+.+.++|+.-+
T Consensus 64 ~~vdgii~~~~~~~-~~---~~~~~~~~~~~iPvV~~ 96 (289)
T 3brs_A 64 RKPDVILLAAADYE-KT---YDAAKEIKDAGIKLIVI 96 (289)
T ss_dssp TCCSEEEECCSCTT-TT---HHHHTTTGGGTCEEEEE
T ss_pred hCCCEEEEeCCChH-Hh---HHHHHHHHHCCCcEEEE
Confidence 58999999874322 11 23455566678898655
No 203
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=39.93 E-value=17 Score=35.51 Aligned_cols=32 Identities=28% Similarity=0.397 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.|+||||- +|||+.+ .+.|..+|++|...=.
T Consensus 13 k~vlITGas-~GIG~~~-----a~~L~~~G~~V~~~~r 44 (311)
T 3o26_A 13 RCAVVTGGN-KGIGFEI-----CKQLSSNGIMVVLTCR 44 (311)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred cEEEEecCC-chHHHHH-----HHHHHHCCCEEEEEeC
Confidence 689999997 8888854 4556678998876533
No 204
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=39.87 E-value=56 Score=31.35 Aligned_cols=85 Identities=19% Similarity=0.185 Sum_probs=38.6
Q ss_pred CceEEEEEcccCCCcchH-HHHHHHHHHccccceeEEEEEeecC-CCcccccccCCchhhhHHHHhc--cCCCEEEECCC
Q 007496 296 EPVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPA-CDLEDATEKENPDAYKAAWKLL--KGADGILVPGG 371 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY-~SIi~aL~~ag~~~~vkv~i~wi~s-~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGG 371 (601)
+..+|+++-. ...+.| ..+++.++.+..+.+..+.+.| ++ .+.+.+ .++.+.+ .++||||+.+.
T Consensus 7 ~~~~Ig~i~~--~~~~~~~~~~~~gi~~~a~~~g~~~~~~~-~~~~~~~~~---------~~~~~~l~~~~vdgiI~~~~ 74 (290)
T 3clk_A 7 SSNVIAAVVS--SVRTNFAQQILDGIQEEAHKNGYNLIIVY-SGSADPEEQ---------KHALLTAIERPVMGILLLSI 74 (290)
T ss_dssp -CCEEEEECC--CCSSSHHHHHHHHHHHHHHTTTCEEEEEC--------------------CHHHHHHSSCCSEEEEESC
T ss_pred cCCEEEEEeC--CCCChHHHHHHHHHHHHHHHcCCeEEEEe-CCCCCHHHH---------HHHHHHHHhcCCCEEEEecc
Confidence 3468999842 233344 4566666555444444444431 21 111110 0112222 58999998764
Q ss_pred CCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007496 372 FGNRGVQGKILAAKYAREHRIPYLGIC 398 (601)
Q Consensus 372 fG~rg~eg~i~aik~are~~iP~LGIC 398 (601)
..+. ..++.+.+.++|+.-+-
T Consensus 75 ~~~~------~~~~~l~~~~iPvV~~~ 95 (290)
T 3clk_A 75 ALTD------DNLQLLQSSDVPYCFLS 95 (290)
T ss_dssp C----------CHHHHHCC--CEEEES
T ss_pred cCCH------HHHHHHHhCCCCEEEEc
Confidence 3221 23455566789987653
No 205
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=39.85 E-value=1.5e+02 Score=28.26 Aligned_cols=34 Identities=15% Similarity=0.067 Sum_probs=22.6
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGIC 398 (601)
.++||||+.+... ......++.+.+.++|+.-+.
T Consensus 58 ~~vdgiii~~~~~----~~~~~~~~~~~~~~iPvV~~~ 91 (309)
T 2fvy_A 58 KGVKALAINLVDP----AAAGTVIEKARGQNVPVVFFN 91 (309)
T ss_dssp TTCSEEEECCSSG----GGHHHHHHHHHTTTCCEEEES
T ss_pred cCCCEEEEeCCCc----chhHHHHHHHHHCCCcEEEec
Confidence 5899999976321 112345667777899987664
No 206
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=39.13 E-value=21 Score=34.36 Aligned_cols=32 Identities=31% Similarity=0.528 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- +|||+. +.+.|-.+|.+|...-.
T Consensus 8 k~~lVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r 39 (257)
T 3tpc_A 8 RVFIVTGAS-SGLGAA-----VTRMLAQEGATVLGLDL 39 (257)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999995 777764 45667788999887643
No 207
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=39.13 E-value=1e+02 Score=29.50 Aligned_cols=32 Identities=13% Similarity=0.298 Sum_probs=21.2
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGIC 398 (601)
.++||||+.+...+. ..++.+.+.++|+.-+.
T Consensus 63 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~~~ 94 (287)
T 3bbl_A 63 GNVDGFVLSSINYND------PRVQFLLKQKFPFVAFG 94 (287)
T ss_dssp TCCSEEEECSCCTTC------HHHHHHHHTTCCEEEES
T ss_pred CCCCEEEEeecCCCc------HHHHHHHhcCCCEEEEC
Confidence 589999997743221 34556667789987653
No 208
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=38.97 E-value=1.7e+02 Score=28.56 Aligned_cols=85 Identities=14% Similarity=0.171 Sum_probs=44.5
Q ss_pred CceEEEEEcccCCCcchHH-HHHHHHHHccccc-eeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCC
Q 007496 296 EPVRIAMVGKYTGLSDAYL-SILKALLHASVDL-RKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGG 371 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY~-SIi~aL~~ag~~~-~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGG 371 (601)
+..+||++-. . .+.|. .+++.++.+..+. +..+.+.. +.. +++.-.++.+.+ .++||||+.+.
T Consensus 5 ~~~~Igvi~~-~--~~~~~~~~~~gi~~~a~~~~g~~l~i~~--~~~--------~~~~~~~~i~~l~~~~vdgiIi~~~ 71 (325)
T 2x7x_A 5 PHFRIGVAQC-S--DDSWRHKMNDEILREAMFYNGVSVEIRS--AGD--------DNSKQAEDVHYFMDEGVDLLIISAN 71 (325)
T ss_dssp -CCEEEEEES-C--CSHHHHHHHHHHHHHHTTSSSCEEEEEE--CTT--------CHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred CCeEEEEEec-C--CCHHHHHHHHHHHHHHHHcCCcEEEEeC--CCC--------CHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 3568998832 2 34454 5666666655444 44443332 221 111111222222 58999999863
Q ss_pred CCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 372 FGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 372 fG~rg~eg~i~aik~are~~iP~LGI 397 (601)
.. +.....++.+.+.++|+.-+
T Consensus 72 ~~----~~~~~~~~~~~~~~iPvV~~ 93 (325)
T 2x7x_A 72 EA----APMTPIVEEAYQKGIPVILV 93 (325)
T ss_dssp SH----HHHHHHHHHHHHTTCCEEEE
T ss_pred CH----HHHHHHHHHHHHCCCeEEEe
Confidence 21 12234566777788998765
No 209
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=38.86 E-value=18 Score=35.49 Aligned_cols=30 Identities=40% Similarity=0.619 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.++||||- +|||+.+ .+.|..+|++|...
T Consensus 6 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 35 (281)
T 3zv4_A 6 EVALITGGA-SGLGRAL-----VDRFVAEGARVAVL 35 (281)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCcCEEEEE
Confidence 789999986 7888754 46677889988774
No 210
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=38.85 E-value=72 Score=30.09 Aligned_cols=31 Identities=19% Similarity=0.275 Sum_probs=20.7
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGI 397 (601)
.++||||+.+...+ + ..++.+.+.++|+.-+
T Consensus 58 ~~vdgii~~~~~~~---~---~~~~~l~~~~iPvV~~ 88 (275)
T 3d8u_A 58 SRPAGVVLFGSEHS---Q---RTHQLLEASNTPVLEI 88 (275)
T ss_dssp SCCCCEEEESSCCC---H---HHHHHHHHHTCCEEEE
T ss_pred cCCCEEEEeCCCCC---H---HHHHHHHhCCCCEEEE
Confidence 58999998764322 1 3455666778998765
No 211
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=38.74 E-value=1.3e+02 Score=28.38 Aligned_cols=87 Identities=17% Similarity=0.182 Sum_probs=44.8
Q ss_pred eEEEEEcccCCCcch-HHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCCCC
Q 007496 298 VRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGN 374 (601)
Q Consensus 298 v~IalVGkY~~l~Da-Y~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGfG~ 374 (601)
-+||++-. ...+. |..+++.++.+..+.+..+.+.+.+.+ ++.-.+..+.+ .++||||+.+....
T Consensus 16 ~~Igvi~~--~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~----------~~~~~~~~~~l~~~~vdgiIi~~~~~~ 83 (298)
T 3tb6_A 16 KTIGVLTT--YISDYIFPSIIRGIESYLSEQGYSMLLTSTNNN----------PDNERRGLENLLSQHIDGLIVEPTKSA 83 (298)
T ss_dssp CEEEEEES--CSSSTTHHHHHHHHHHHHHHTTCEEEEEECTTC----------HHHHHHHHHHHHHTCCSEEEECCSSTT
T ss_pred ceEEEEeC--CCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCC----------hHHHHHHHHHHHHCCCCEEEEeccccc
Confidence 57888843 23333 445565555554444444444333211 11111112222 58999999874322
Q ss_pred CchhHHHHHHHHHHHcCCCEEEE
Q 007496 375 RGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 375 rg~eg~i~aik~are~~iP~LGI 397 (601)
- .......++.+.+.++|+.-+
T Consensus 84 ~-~~~~~~~~~~~~~~~iPvV~~ 105 (298)
T 3tb6_A 84 L-QTPNIGYYLNLEKNGIPFAMI 105 (298)
T ss_dssp S-CCTTHHHHHHHHHTTCCEEEE
T ss_pred c-cCCcHHHHHHHHhcCCCEEEE
Confidence 1 111224567777889998765
No 212
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=38.47 E-value=30 Score=33.83 Aligned_cols=35 Identities=23% Similarity=0.457 Sum_probs=30.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCe-eEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLR-VTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~-v~~~k 38 (601)
++|++.|. +|-||+..+.-+...|+.+|++ |...+
T Consensus 28 ~~i~~eG~--~GsGKsT~~~~l~~~l~~~~~~~~~~~r 63 (236)
T 3lv8_A 28 KFIVIEGL--EGAGKSTAIQVVVETLQQNGIDHITRTR 63 (236)
T ss_dssp CEEEEEES--TTSCHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhcCCCeeeeec
Confidence 58999985 8999999999999999999999 54443
No 213
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=38.42 E-value=69 Score=30.31 Aligned_cols=81 Identities=11% Similarity=0.129 Sum_probs=39.6
Q ss_pred ceEEEEEcccCCCcchH-HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCCC
Q 007496 297 PVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFG 373 (601)
Q Consensus 297 ~v~IalVGkY~~l~DaY-~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGfG 373 (601)
.-+||++- ....+.| ..+++.++.+..+.+..+.+...+.+ ++.-.+..+.+ .++||||+.+ .
T Consensus 8 ~~~Ig~i~--~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~----------~~~~~~~~~~l~~~~~dgiIi~~--~ 73 (277)
T 3e61_A 8 SKLIGLLL--PDMSNPFFTLIARGVEDVALAHGYQVLIGNSDND----------IKKAQGYLATFVSHNCTGMISTA--F 73 (277)
T ss_dssp --CEEEEE--SCTTSHHHHHHHHHHHHHHHHTTCCEEEEECTTC----------HHHHHHHHHHHHHTTCSEEEECG--G
T ss_pred CCEEEEEE--CCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCC----------HHHHHHHHHHHHhCCCCEEEEec--C
Confidence 45688883 2333444 35555555544444443333332221 11111122333 5899999987 1
Q ss_pred CCchhHHHHHHH-HHHHcCCCEEEE
Q 007496 374 NRGVQGKILAAK-YAREHRIPYLGI 397 (601)
Q Consensus 374 ~rg~eg~i~aik-~are~~iP~LGI 397 (601)
. -..++ .+.+.++|+.-+
T Consensus 74 ---~---~~~~~~~l~~~~iPvV~~ 92 (277)
T 3e61_A 74 ---N---ENIIENTLTDHHIPFVFI 92 (277)
T ss_dssp ---G---HHHHHHHHHHC-CCEEEG
T ss_pred ---C---hHHHHHHHHcCCCCEEEE
Confidence 1 13466 777889998654
No 214
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=38.37 E-value=24 Score=34.01 Aligned_cols=31 Identities=29% Similarity=0.409 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|-++||||- +|||+.+ .+.|..+|++|...-
T Consensus 1 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~ 31 (248)
T 3asu_A 1 MIVLVTGAT-AGFGECI-----TRRFIQQGHKVIATG 31 (248)
T ss_dssp CEEEETTTT-STTHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 568999984 8999865 456777899988753
No 215
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=38.33 E-value=18 Score=35.18 Aligned_cols=32 Identities=38% Similarity=0.446 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|-++||||- +|||+.+ .+.|-.+|++|...-.
T Consensus 11 k~~lVTGas-~gIG~ai-----a~~l~~~G~~V~~~~r 42 (267)
T 3t4x_A 11 KTALVTGST-AGIGKAI-----ATSLVAEGANVLINGR 42 (267)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 679999985 7888754 4667778998876533
No 216
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=38.32 E-value=54 Score=31.41 Aligned_cols=84 Identities=6% Similarity=0.122 Sum_probs=42.3
Q ss_pred CceEEEEEcccCCCcchH-HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCC
Q 007496 296 EPVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 372 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY-~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGf 372 (601)
+..+||++- ....+.| ..+++.++.+..+.+..+.+.+.+.+ ++.-.+..+.+ .++||||+.+..
T Consensus 7 ~~~~Igvv~--~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~----------~~~~~~~~~~l~~~~vdgiIi~~~~ 74 (291)
T 3egc_A 7 RSNVVGLIV--SDIENVFFAEVASGVESEARHKGYSVLLANTAED----------IVREREAVGQFFERRVDGLILAPSE 74 (291)
T ss_dssp CCCEEEEEE--SCTTSHHHHHHHHHHHHHHHHTTCEEEEEECTTC----------HHHHHHHHHHHHHTTCSEEEECCCS
T ss_pred CCcEEEEEE--CCCcchHHHHHHHHHHHHHHHCCCEEEEEeCCCC----------HHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 446788883 2233444 35555555554444444444333221 11111122233 589999998753
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 373 GNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 373 G~rg~eg~i~aik~are~~iP~LGI 397 (601)
.. . ..++.+.+.++|+.-+
T Consensus 75 ~~---~---~~~~~~~~~~iPvV~~ 93 (291)
T 3egc_A 75 GE---H---DYLRTELPKTFPIVAV 93 (291)
T ss_dssp SC---C---HHHHHSSCTTSCEEEE
T ss_pred CC---h---HHHHHhhccCCCEEEE
Confidence 31 1 2345555667887644
No 217
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=38.30 E-value=21 Score=35.16 Aligned_cols=31 Identities=32% Similarity=0.527 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+. +.+.|..+|++|...-
T Consensus 30 k~vlVTGas-~gIG~a-----ia~~la~~G~~V~~~~ 60 (277)
T 3gvc_A 30 KVAIVTGAG-AGIGLA-----VARRLADEGCHVLCAD 60 (277)
T ss_dssp CEEEETTTT-STHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 679999986 888875 4556777899987753
No 218
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=38.23 E-value=19 Score=35.17 Aligned_cols=31 Identities=29% Similarity=0.480 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+. +.+.|..+|++|...-
T Consensus 17 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~ 47 (266)
T 3p19_A 17 KLVVITGAS-SGIGEA-----IARRFSEEGHPLLLLA 47 (266)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCCEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEE
Confidence 789999995 788875 4567778899988753
No 219
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=38.14 E-value=18 Score=34.80 Aligned_cols=30 Identities=43% Similarity=0.554 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|-++||||- +|||+. +.+.|..+|++|...
T Consensus 7 k~vlVTGas-~gIG~a-----~a~~l~~~G~~V~~~ 36 (247)
T 3rwb_A 7 KTALVTGAA-QGIGKA-----IAARLAADGATVIVS 36 (247)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999985 777774 456777889998764
No 220
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=38.10 E-value=31 Score=32.35 Aligned_cols=34 Identities=32% Similarity=0.491 Sum_probs=24.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
||-|+||||- ++||+-+ .+.|..+|++|..+-.+
T Consensus 1 Mk~vlVtGas-g~iG~~l-----~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 1 MSVIAITGSA-SGIGAAL-----KELLARAGHTVIGIDRG 34 (255)
T ss_dssp -CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CcEEEEeCCC-cHHHHHH-----HHHHHhCCCEEEEEeCC
Confidence 7889999985 6677654 45566789999887544
No 221
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=38.09 E-value=19 Score=34.87 Aligned_cols=32 Identities=34% Similarity=0.422 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- +|||+.+ .+.|-.+|++|...-.
T Consensus 9 k~~lVTGas-~GIG~ai-----a~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 9 AVAVVTGGS-SGIGLAT-----VELLLEAGAAVAFCAR 40 (265)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEeC
Confidence 689999985 7788754 4667778998876533
No 222
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=38.02 E-value=21 Score=33.88 Aligned_cols=34 Identities=29% Similarity=0.328 Sum_probs=23.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHH-CCCeeEEeeec
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKA-CGLRVTCIKID 40 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~-~g~~v~~~k~d 40 (601)
+|-|+||||- +|||+.++ +.|-. +|++|..+=.+
T Consensus 4 ~k~vlITGas-ggIG~~~a-----~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 4 IHVALVTGGN-KGIGLAIV-----RDLCRLFSGDVVLTARD 38 (276)
T ss_dssp CCEEEESSCS-SHHHHHHH-----HHHHHHSSSEEEEEESS
T ss_pred CCEEEEeCCC-cHHHHHHH-----HHHHHhcCCeEEEEeCC
Confidence 4789999985 77777554 44555 89888766443
No 223
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=38.00 E-value=23 Score=33.58 Aligned_cols=33 Identities=39% Similarity=0.597 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
|-++||||- +|||+. +.+.|..+|++|...-.+
T Consensus 3 k~vlVTGas-~giG~~-----~a~~l~~~G~~V~~~~r~ 35 (239)
T 2ekp_A 3 RKALVTGGS-RGIGRA-----IAEALVARGYRVAIASRN 35 (239)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 789999985 777764 455677889998876444
No 224
>3nrs_A Dihydrofolate:folylpolyglutamate synthetase; structural genomics, center for structural genomics of infec diseases, csgid; HET: TLA MES; 1.80A {Yersinia pestis} PDB: 3n2a_A* 3pyz_A* 3qcz_A*
Probab=37.99 E-value=26 Score=37.22 Aligned_cols=31 Identities=42% Similarity=0.604 Sum_probs=27.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (601)
|.|=|||- =|||-|++-|..+|++.|+||-.
T Consensus 53 ~vI~VtGT----NGKgSt~~~l~~iL~~~G~~vg~ 83 (437)
T 3nrs_A 53 KIFTVAGT----NGKGTTCCTLEAILLAAGLRVGV 83 (437)
T ss_dssp EEEEEECS----SSHHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEECC----cChHHHHHHHHHHHHHCCCcEEE
Confidence 67888885 69999999999999999999965
No 225
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=37.67 E-value=17 Score=35.03 Aligned_cols=32 Identities=31% Similarity=0.434 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- +|||+. +.+.|..+|++|...=.
T Consensus 8 k~~lVTGas-~GIG~a-----ia~~l~~~G~~V~~~~r 39 (250)
T 3nyw_A 8 GLAIITGAS-QGIGAV-----IAAGLATDGYRVVLIAR 39 (250)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHHTCEEEEEES
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEEC
Confidence 689999996 788874 45566677998876543
No 226
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=37.65 E-value=20 Score=33.91 Aligned_cols=30 Identities=33% Similarity=0.467 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|-|+||||- +|||+.+ .+.|..+|++|..+
T Consensus 6 ~~vlItGas-ggiG~~~-----a~~l~~~G~~V~~~ 35 (247)
T 2hq1_A 6 KTAIVTGSS-RGLGKAI-----AWKLGNMGANIVLN 35 (247)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred cEEEEECCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 679999986 7888754 45677789888765
No 227
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=37.26 E-value=20 Score=34.80 Aligned_cols=33 Identities=39% Similarity=0.524 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
|.++||||- +|||+. +.+.|-.+|++|..+-.+
T Consensus 11 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 11 KVVLVTGGA-RGQGRS-----HAVKLAEEGADIILFDIC 43 (287)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCC-ChHHHH-----HHHHHHHCCCeEEEEccc
Confidence 789999986 777764 556677889998876443
No 228
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=37.21 E-value=23 Score=34.54 Aligned_cols=32 Identities=34% Similarity=0.503 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- +|||+. +.+.|-.+|++|...-.
T Consensus 31 k~vlVTGas-~GIG~a-----ia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 31 ASAIVSGGA-GGLGEA-----TVRRLHADGLGVVIADL 62 (281)
T ss_dssp EEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999985 788775 44566778999887543
No 229
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=37.13 E-value=21 Score=35.04 Aligned_cols=30 Identities=30% Similarity=0.442 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.++||||- +|||+.+ .+.|-.+|.+|...
T Consensus 34 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 63 (275)
T 4imr_A 34 RTALVTGSS-RGIGAAI-----AEGLAGAGAHVILH 63 (275)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999986 7888754 45677789998765
No 230
>1o5z_A Folylpolyglutamate synthase/dihydrofolate synthas; TM0166, structural genomics, JC protein structure initiative; 2.10A {Thermotoga maritima} SCOP: c.59.1.2 c.72.2.2
Probab=37.10 E-value=29 Score=36.90 Aligned_cols=32 Identities=31% Similarity=0.443 Sum_probs=28.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.|-|||- =|||.|++=|..+|++.|++|...
T Consensus 53 ~vI~VTGT----nGKtTT~~~l~~iL~~~G~~vg~~ 84 (442)
T 1o5z_A 53 KTIHIGGT----NGKGSVANMVSNILVSQGYRVGSY 84 (442)
T ss_dssp EEEEEECS----SSHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CEEEEECC----cCHHHHHHHHHHHHHHCCCCEEEE
Confidence 67888984 699999999999999999998754
No 231
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=37.06 E-value=19 Score=35.20 Aligned_cols=29 Identities=38% Similarity=0.681 Sum_probs=22.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (601)
|.++||||- +|||+. +.+.|-.+|++|..
T Consensus 29 k~vlVTGas-~gIG~a-----ia~~la~~G~~V~~ 57 (269)
T 4dmm_A 29 RIALVTGAS-RGIGRA-----IALELAAAGAKVAV 57 (269)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEE
Confidence 789999986 788875 45567778988765
No 232
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=37.03 E-value=23 Score=34.39 Aligned_cols=34 Identities=29% Similarity=0.472 Sum_probs=25.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (601)
|.|+||||- +|||+.+ .+.|..+|++|...-.++
T Consensus 9 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r~~ 42 (264)
T 2dtx_A 9 KVVIVTGAS-MGIGRAI-----AERFVDEGSKVIDLSIHD 42 (264)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEESSC
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEecCc
Confidence 789999985 7888754 466778899998775443
No 233
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=37.00 E-value=22 Score=34.55 Aligned_cols=32 Identities=34% Similarity=0.398 Sum_probs=23.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
+|-++||||- +|||+.+ .+.|..+|++|...-
T Consensus 5 ~k~vlVTGas-~gIG~~~-----a~~l~~~G~~V~~~~ 36 (281)
T 3m1a_A 5 AKVWLVTGAS-SGFGRAI-----AEAAVAAGDTVIGTA 36 (281)
T ss_dssp CCEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CcEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 3789999986 7777754 456777899887653
No 234
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=36.92 E-value=99 Score=29.31 Aligned_cols=79 Identities=8% Similarity=-0.093 Sum_probs=40.6
Q ss_pred CceEEEEEcccCCCcc-hHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCC
Q 007496 296 EPVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGN 374 (601)
Q Consensus 296 ~~v~IalVGkY~~l~D-aY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~ 374 (601)
+..+||++-.. ..+ -|..+++.++.+..+.+..+.+...+. +.+.+ ..+ ++||||+.+...+
T Consensus 7 ~~~~Igvi~~~--~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~-~~~~~-------------~~~-~vdgiI~~~~~~~ 69 (277)
T 3cs3_A 7 QTNIIGVYLAD--YGGSFYGELLEGIKKGLALFDYEMIVCSGKK-SHLFI-------------PEK-MVDGAIILDWTFP 69 (277)
T ss_dssp CCCEEEEEECS--SCTTTHHHHHHHHHHHHHTTTCEEEEEESTT-TTTCC-------------CTT-TCSEEEEECTTSC
T ss_pred CCcEEEEEecC--CCChhHHHHHHHHHHHHHHCCCeEEEEeCCC-CHHHH-------------hhc-cccEEEEecCCCC
Confidence 45689988322 223 344566555555444444433333221 11110 112 8999999774221
Q ss_pred CchhHHHHHHHHHHHcCCCEEEE
Q 007496 375 RGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 375 rg~eg~i~aik~are~~iP~LGI 397 (601)
. ..++.+.+.++|+.-+
T Consensus 70 ---~---~~~~~l~~~~iPvV~~ 86 (277)
T 3cs3_A 70 ---T---KEIEKFAERGHSIVVL 86 (277)
T ss_dssp ---H---HHHHHHHHTTCEEEES
T ss_pred ---H---HHHHHHHhcCCCEEEE
Confidence 1 3455666778997654
No 235
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=36.90 E-value=20 Score=34.00 Aligned_cols=31 Identities=32% Similarity=0.418 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+ .+.+.|-.+|++|...-
T Consensus 6 k~vlITGas-~gIG~-----~~a~~l~~~G~~v~~~~ 36 (247)
T 3lyl_A 6 KVALVTGAS-RGIGF-----EVAHALASKGATVVGTA 36 (247)
T ss_dssp CEEEESSCS-SHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHH-----HHHHHHHHCCCEEEEEe
Confidence 789999985 77776 45566777899887653
No 236
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=36.82 E-value=24 Score=34.02 Aligned_cols=33 Identities=33% Similarity=0.519 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
|-++||||- +|||+.+ .+.|..+|++|...-.+
T Consensus 7 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r~ 39 (256)
T 2d1y_A 7 KGVLVTGGA-RGIGRAI-----AQAFAREGALVALCDLR 39 (256)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 789999985 7888754 45677789998776443
No 237
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=36.79 E-value=20 Score=34.27 Aligned_cols=29 Identities=34% Similarity=0.636 Sum_probs=21.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (601)
|.|+||||- +|||+.+ .+.|-.+|++|..
T Consensus 14 k~vlITGas-~giG~~i-----a~~l~~~G~~v~~ 42 (256)
T 3ezl_A 14 RIAYVTGGM-GGIGTSI-----CQRLHKDGFRVVA 42 (256)
T ss_dssp EEEEETTTT-SHHHHHH-----HHHHHHTTEEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEE
Confidence 889999995 7888754 4566778888754
No 238
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=36.65 E-value=20 Score=34.78 Aligned_cols=30 Identities=40% Similarity=0.568 Sum_probs=22.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (601)
+|.|+||||- +|||+ ++.+.|-.+|++|..
T Consensus 26 ~k~vlITGas-~gIG~-----a~a~~l~~~G~~V~~ 55 (272)
T 4e3z_A 26 TPVVLVTGGS-RGIGA-----AVCRLAARQGWRVGV 55 (272)
T ss_dssp SCEEEETTTT-SHHHH-----HHHHHHHHTTCEEEE
T ss_pred CCEEEEECCC-chHHH-----HHHHHHHHCCCEEEE
Confidence 3789999984 77876 455667778988754
No 239
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=36.62 E-value=24 Score=33.81 Aligned_cols=34 Identities=29% Similarity=0.375 Sum_probs=25.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (601)
|-++||||- +|||+.+ .+.|..+|++|...-.++
T Consensus 8 k~vlVTGas-~giG~~i-----a~~l~~~G~~V~~~~r~~ 41 (250)
T 2fwm_X 8 KNVWVTGAG-KGIGYAT-----ALAFVEAGAKVTGFDQAF 41 (250)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEESCC
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEeCch
Confidence 679999986 7888754 456778899998765443
No 240
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=36.54 E-value=23 Score=33.54 Aligned_cols=31 Identities=32% Similarity=0.473 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+.+ .+.|..+|++|...-
T Consensus 3 k~vlItGas-ggiG~~~-----a~~l~~~G~~V~~~~ 33 (250)
T 2cfc_A 3 RVAIVTGAS-SGNGLAI-----ATRFLARGDRVAALD 33 (250)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999986 7787754 455667899887653
No 241
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=36.47 E-value=20 Score=34.11 Aligned_cols=31 Identities=39% Similarity=0.538 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.|+||||- +|||+. +.+.|..+|++|...-
T Consensus 15 k~vlVTGas-~gIG~~-----~a~~l~~~G~~V~~~~ 45 (249)
T 3f9i_A 15 KTSLITGAS-SGIGSA-----IARLLHKLGSKVIISG 45 (249)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEEEc
Confidence 789999995 777764 4567778899988753
No 242
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=36.47 E-value=1.5e+02 Score=28.68 Aligned_cols=79 Identities=20% Similarity=0.269 Sum_probs=50.0
Q ss_pred CceEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCC
Q 007496 296 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 375 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~r 375 (601)
+.-+|.+||- -..+-..|.++-+++|+.. +.-.|+.-. |..... +.+..+|.|+|.. +
T Consensus 67 ~~~~iLfVgT---k~~~~~~V~~~A~~~g~~~---v~~rwlgG~-LTN~~~-----------~~f~~PdlliV~D----p 124 (208)
T 1vi6_A 67 EPSKILLVAA---RQYAHKPVQMFSKVVGSDY---IVGRFIPGT-LTNPML-----------SEYREPEVVFVND----P 124 (208)
T ss_dssp CGGGEEEEEC---SGGGHHHHHHHHHHHCCEE---EESSCCTTT-TTCTTS-----------TTCCCCSEEEESC----T
T ss_pred CCCEEEEEeC---CHHHHHHHHHHHHHhCCee---ecCEECCCc-ccChhh-----------HhhCCCCEEEEEC----C
Confidence 4457999972 2224456777777777653 234676532 322111 2346789999985 2
Q ss_pred chhHHHHHHHHHHHcCCCEEEEe
Q 007496 376 GVQGKILAAKYAREHRIPYLGIC 398 (601)
Q Consensus 376 g~eg~i~aik~are~~iP~LGIC 398 (601)
.. ...|+++|..-+||+.|+|
T Consensus 125 ~~--e~~ai~EA~~l~IPvIalv 145 (208)
T 1vi6_A 125 AI--DKQAVSEATAVGIPVVALC 145 (208)
T ss_dssp TT--THHHHHHHHHTTCCEEEEE
T ss_pred Cc--chhHHHHHHHhCCCEEEEe
Confidence 22 2368999999999999998
No 243
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=36.01 E-value=25 Score=34.76 Aligned_cols=33 Identities=39% Similarity=0.678 Sum_probs=26.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
|-++||||- ||||+. +.+.|-..|.+|...-+|
T Consensus 12 K~alVTGas-~GIG~a-----ia~~la~~Ga~Vv~~~~~ 44 (242)
T 4b79_A 12 QQVLVTGGS-SGIGAA-----IAMQFAELGAEVVALGLD 44 (242)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 779999995 888875 567888999999876543
No 244
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=35.99 E-value=44 Score=31.30 Aligned_cols=47 Identities=21% Similarity=0.234 Sum_probs=31.9
Q ss_pred eEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcc-ccccCcchHHHHHHHH
Q 007496 111 VQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALGQF 166 (601)
Q Consensus 111 vqviphit~~i~~~i~~~~~~~~d~~~~~~dv~i~e~ggt-vgdies~pf~ea~rq~ 166 (601)
..+||.=-++|++.|++... ..++|++|+ .||| +|+--=.| ||++++
T Consensus 59 ~~iv~Dd~~~I~~al~~a~~------~~~~DlVit-tGG~s~g~~D~t~--eal~~~ 106 (178)
T 2pjk_A 59 YSLVPDDKIKILKAFTDALS------IDEVDVIIS-TGGTGYSPTDITV--ETIRKL 106 (178)
T ss_dssp EEEECSCHHHHHHHHHHHHT------CTTCCEEEE-ESCCSSSTTCCHH--HHHGGG
T ss_pred EEEeCCCHHHHHHHHHHHHh------cCCCCEEEE-CCCCCCCCCcchH--HHHHHH
Confidence 35889989999999999873 234898886 7776 55533333 555544
No 245
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=35.93 E-value=22 Score=34.38 Aligned_cols=32 Identities=28% Similarity=0.301 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- ||||+. +.+.|-.+|.+|...-.
T Consensus 9 k~~lVTGas-~gIG~a-----~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 9 KKAIVIGGT-HGMGLA-----TVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp CEEEEETCS-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999985 788874 55677788999877543
No 246
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=35.86 E-value=22 Score=34.66 Aligned_cols=31 Identities=23% Similarity=0.477 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- ||||+.+ .+.|-.+|++|..+-
T Consensus 12 k~~lVTGas-~GIG~a~-----a~~la~~G~~V~~~~ 42 (277)
T 3tsc_A 12 RVAFITGAA-RGQGRAH-----AVRMAAEGADIIAVD 42 (277)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCc-cHHHHHH-----HHHHHHcCCEEEEEe
Confidence 789999986 7888754 456778899988763
No 247
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=35.84 E-value=21 Score=35.00 Aligned_cols=32 Identities=28% Similarity=0.506 Sum_probs=24.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- ||||+.+ .+.|-.+|++|...-.
T Consensus 5 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~r 36 (264)
T 3tfo_A 5 KVILITGAS-GGIGEGI-----ARELGVAGAKILLGAR 36 (264)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCc-cHHHHHH-----HHHHHHCCCEEEEEEC
Confidence 789999997 8888755 4566778998877643
No 248
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=35.84 E-value=28 Score=40.35 Aligned_cols=36 Identities=17% Similarity=0.228 Sum_probs=32.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHC-----CCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKAC-----GLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~-----g~~v~~~k 38 (601)
|-|||+ |.=|+.||=++++.|-++|+.+ |++|...|
T Consensus 35 ~~l~I~-gt~s~vGKT~vt~gL~r~l~~~~~~~~G~~V~~fK 75 (831)
T 4a0g_A 35 PTYLIW-SANTSLGKTLVSTGIAASFLLQQPSSSATKLLYLK 75 (831)
T ss_dssp CEEEEE-ESSSSSCHHHHHHHHHHHHHSCSSCCTTCEEEEEE
T ss_pred ccEEEE-ECCCCCCHHHHHHHHHHHHHhcccccCCceEEEEc
Confidence 556676 4679999999999999999999 99999999
No 249
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=35.67 E-value=26 Score=33.10 Aligned_cols=34 Identities=32% Similarity=0.448 Sum_probs=25.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (601)
|-|+||||- +|||+. +.+.|.++|++|...-.++
T Consensus 4 k~vlITGas-~gIG~~-----~a~~l~~~G~~V~~~~r~~ 37 (236)
T 1ooe_A 4 GKVIVYGGK-GALGSA-----ILEFFKKNGYTVLNIDLSA 37 (236)
T ss_dssp EEEEEETTT-SHHHHH-----HHHHHHHTTEEEEEEESSC
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEecCc
Confidence 789999984 677764 5567778899998875543
No 250
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10
Probab=35.65 E-value=1.4e+02 Score=30.14 Aligned_cols=40 Identities=38% Similarity=0.532 Sum_probs=34.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyl 43 (601)
+.|.++| -.|-||=.+...+..+++..|.+|..+-.||.-
T Consensus 57 ~~i~i~G--~~g~GKSTl~~~l~~~~~~~~~~v~v~~~d~~~ 96 (341)
T 2p67_A 57 LRLGVTG--TPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSS 96 (341)
T ss_dssp EEEEEEE--CTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-
T ss_pred EEEEEEc--CCCCCHHHHHHHHHHHHHhcCCeEEEEeecCCc
Confidence 4567777 899999999999999999999999999888864
No 251
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=35.50 E-value=37 Score=32.56 Aligned_cols=33 Identities=24% Similarity=0.459 Sum_probs=28.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCC-eeEE
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGL-RVTC 36 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~-~v~~ 36 (601)
++|.+.|. +|-||+..+.-+...|+.+|+ .|..
T Consensus 4 ~~i~~eG~--~gsGKsT~~~~l~~~l~~~~~~~v~~ 37 (213)
T 4tmk_A 4 KYIVIEGL--EGAGKTTARNVVVETLEQLGIRDMVF 37 (213)
T ss_dssp CEEEEEEC--TTSCHHHHHHHHHHHHHHTTCCCEEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHHcCCCccee
Confidence 58999984 899999999999999999998 5543
No 252
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=35.43 E-value=20 Score=34.42 Aligned_cols=29 Identities=31% Similarity=0.471 Sum_probs=24.6
Q ss_pred CcchHHHHHHHHHHHHH--CCCeeEEeeecc
Q 007496 13 GLGKGVTASSIGVLLKA--CGLRVTCIKIDP 41 (601)
Q Consensus 13 ~~gkg~~~~s~g~ll~~--~g~~v~~~k~dp 41 (601)
|=|||-|.|++|..|++ +|+||-++-+++
T Consensus 36 G~GkGKTTaA~GlalRA~g~G~rV~~vQF~K 66 (196)
T 1g5t_A 36 GNGKGKTTAAFGTAARAVGHGKNVGVVQFIK 66 (196)
T ss_dssp SSSSCHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCeEEEEEeeC
Confidence 45899999999999887 578999997776
No 253
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A*
Probab=35.42 E-value=48 Score=33.92 Aligned_cols=41 Identities=32% Similarity=0.509 Sum_probs=32.9
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccC
Q 007496 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNT 45 (601)
Q Consensus 3 ~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~ 45 (601)
.|.+||- .|.||=.++..++..|...|.+|..+-.||.-..
T Consensus 81 ~I~i~G~--~G~GKSTl~~~L~~~l~~~g~kV~vi~~Dp~~~~ 121 (355)
T 3p32_A 81 RVGITGV--PGVGKSTAIEALGMHLIERGHRVAVLAVDPSSTR 121 (355)
T ss_dssp EEEEECC--TTSSHHHHHHHHHHHHHTTTCCEEEEEEC-----
T ss_pred EEEEECC--CCCCHHHHHHHHHHHHHhCCCceEEEecCCCCCc
Confidence 5777774 9999999999999999999999999999987664
No 254
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=35.38 E-value=22 Score=34.16 Aligned_cols=30 Identities=40% Similarity=0.591 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.++||||- +|||+.+ .+.|..+|.+|...
T Consensus 10 k~~lVTGas-~gIG~a~-----a~~l~~~G~~V~~~ 39 (248)
T 3op4_A 10 KVALVTGAS-RGIGKAI-----AELLAERGAKVIGT 39 (248)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999985 7888754 45677889988765
No 255
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=35.35 E-value=22 Score=34.37 Aligned_cols=29 Identities=38% Similarity=0.622 Sum_probs=22.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (601)
|.|+||||- +|||+. +.+.|-.+|++|..
T Consensus 27 k~vlVTGas-~gIG~~-----la~~l~~~G~~v~i 55 (267)
T 4iiu_A 27 RSVLVTGAS-KGIGRA-----IARQLAADGFNIGV 55 (267)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEE
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEE
Confidence 789999985 888874 45667778988754
No 256
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=35.31 E-value=23 Score=34.54 Aligned_cols=31 Identities=39% Similarity=0.577 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+.++ +.|..+|++|...-
T Consensus 22 k~~lVTGas-~gIG~~ia-----~~l~~~G~~V~~~~ 52 (267)
T 1vl8_A 22 RVALVTGGS-RGLGFGIA-----QGLAEAGCSVVVAS 52 (267)
T ss_dssp CEEEEETTT-SHHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEEe
Confidence 789999985 78887554 56677899887653
No 257
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=35.21 E-value=26 Score=33.54 Aligned_cols=32 Identities=22% Similarity=0.548 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- +|||+.+ .+.|..+|++|...-.
T Consensus 8 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 39 (249)
T 2ew8_A 8 KLAVITGGA-NGIGRAI-----AERFAVEGADIAIADL 39 (249)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEcC
Confidence 689999984 7777754 4556778998877543
No 258
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=35.04 E-value=1.4e+02 Score=29.91 Aligned_cols=89 Identities=4% Similarity=-0.077 Sum_probs=50.0
Q ss_pred CceEEEEEcccCCCcchHH----HHHHHHHHcc-ccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECC
Q 007496 296 EPVRIAMVGKYTGLSDAYL----SILKALLHAS-VDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPG 370 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY~----SIi~aL~~ag-~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpG 370 (601)
++.||.|++.-. .+| +. .+.+.|+..| +++.+. .. .+..+ +++.|. +.|+++|.||+.-
T Consensus 3 ~~~kvLiv~G~~-~H~-~~~~~~~l~~~l~~~g~f~V~~~----~d-~~~~~------d~~~f~---~~L~~~D~vV~~~ 66 (281)
T 4e5v_A 3 KPIKTLLITGQN-NHN-WQVSHVVLKQILENSGRFDVDFV----IS-PEQGK------DMSGFV---LDFSPYQLVVLDY 66 (281)
T ss_dssp CCEEEEEEESCC-SSC-HHHHHHHHHHHHHHTTSEEEEEE----EC-CCTTS------CCTTCC---CCCTTCSEEEECC
T ss_pred CceEEEEEcCCC-CCC-hHHHHHHHHHHHHhcCCEEEEEE----eC-Ccccc------chhHHh---hhhhcCCEEEEeC
Confidence 467899887544 334 43 3455666666 554332 21 10000 111221 2488999999644
Q ss_pred CCCCCchhHHHHHHHHHHHcCCCEEEEehhH
Q 007496 371 GFGNRGVQGKILAAKYAREHRIPYLGICLGM 401 (601)
Q Consensus 371 GfG~rg~eg~i~aik~are~~iP~LGICLGm 401 (601)
.|+.-.+...++++...+++.+++|+.-+.
T Consensus 67 -~~~~l~~~~~~~l~~yV~~Ggglv~~H~a~ 96 (281)
T 4e5v_A 67 -NGDSWPEETNRRFLEYVQNGGGVVIYHAAD 96 (281)
T ss_dssp -CSSCCCHHHHHHHHHHHHTTCEEEEEGGGG
T ss_pred -CCCcCCHHHHHHHHHHHHcCCCEEEEeccc
Confidence 333323445667766777899999998643
No 259
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=35.02 E-value=22 Score=34.39 Aligned_cols=29 Identities=34% Similarity=0.568 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (601)
|-++||||- +|||+.+ .+.|-.+|++|..
T Consensus 5 k~vlVTGas-~gIG~ai-----a~~l~~~G~~vv~ 33 (258)
T 3oid_A 5 KCALVTGSS-RGVGKAA-----AIRLAENGYNIVI 33 (258)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEE
T ss_pred CEEEEecCC-chHHHHH-----HHHHHHCCCEEEE
Confidence 789999985 7888754 4567788998765
No 260
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=34.94 E-value=23 Score=34.52 Aligned_cols=33 Identities=30% Similarity=0.501 Sum_probs=25.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
|.++||||- +|||+.+ .+.|-.+|++|...-.+
T Consensus 11 k~~lVTGas-~gIG~a~-----a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 11 KTALITGGA-RGMGRSH-----AVALAEAGADIAICDRC 43 (281)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCeEEEEeCC
Confidence 789999986 7888754 56677889998876544
No 261
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=34.91 E-value=24 Score=34.02 Aligned_cols=31 Identities=23% Similarity=0.410 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|-++||||- +|||+.+ .+.|..+|++|...-
T Consensus 8 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 38 (263)
T 3ai3_A 8 KVAVITGSS-SGIGLAI-----AEGFAKEGAHIVLVA 38 (263)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEEEc
Confidence 779999985 7787754 455677899887653
No 262
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=34.89 E-value=22 Score=34.18 Aligned_cols=31 Identities=35% Similarity=0.697 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+.++ +.|..+|++|...-
T Consensus 3 k~vlVTGas-~gIG~~ia-----~~l~~~G~~V~~~~ 33 (258)
T 3a28_C 3 KVAMVTGGA-QGIGRGIS-----EKLAADGFDIAVAD 33 (258)
T ss_dssp CEEEEETTT-SHHHHHHH-----HHHHHHTCEEEEEE
T ss_pred CEEEEeCCC-cHHHHHHH-----HHHHHCCCEEEEEe
Confidence 789999985 78887544 45666799887653
No 263
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=34.77 E-value=26 Score=34.08 Aligned_cols=32 Identities=28% Similarity=0.509 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- +|||+. +.+.|-.+|++|...-.
T Consensus 12 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r 43 (271)
T 3tzq_B 12 KVAIITGAC-GGIGLE-----TSRVLARAGARVVLADL 43 (271)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEcC
Confidence 789999995 778775 44567788999887643
No 264
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=34.59 E-value=21 Score=34.37 Aligned_cols=30 Identities=37% Similarity=0.523 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.++||||- ||||+. +.+.|-.+|++|...
T Consensus 10 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~ 39 (257)
T 3tl3_A 10 AVAVVTGGA-SGLGLA-----TTKRLLDAGAQVVVL 39 (257)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHHTCEEEEE
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 679999986 788875 445677789988764
No 265
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=34.57 E-value=1.5e+02 Score=28.59 Aligned_cols=33 Identities=24% Similarity=0.406 Sum_probs=21.1
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGI 397 (601)
.++||||+.+.... ... ..++.+.+.++|+.-+
T Consensus 57 ~~vdgiIi~~~~~~-~~~---~~~~~~~~~~iPvV~~ 89 (306)
T 2vk2_A 57 QGVDAIFIAPVVAT-GWE---PVLKEAKDAEIPVFLL 89 (306)
T ss_dssp HTCSEEEECCSSSS-SCH---HHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEeCCChh-hHH---HHHHHHHHCCCCEEEe
Confidence 58999999874322 112 2455666778998654
No 266
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=34.46 E-value=34 Score=31.67 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=24.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (601)
|| |+||||- ++||+ .+-..|.++|++|..+-.+|
T Consensus 1 M~-ilItGat-G~iG~-----~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 1 MK-IFIVGST-GRVGK-----SLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp CE-EEEESTT-SHHHH-----HHHHHHTTSSCEEEEEESSG
T ss_pred Ce-EEEECCC-CHHHH-----HHHHHHHHCCCEEEEEECCc
Confidence 66 8999975 55554 55566778899999887665
No 267
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=34.40 E-value=22 Score=34.43 Aligned_cols=32 Identities=31% Similarity=0.654 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- +|||+.+ .+.|..+|++|...-.
T Consensus 11 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~r 42 (262)
T 3pk0_A 11 RSVVVTGGT-KGIGRGI-----ATVFARAGANVAVAGR 42 (262)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999985 7888754 4567788998877543
No 268
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=34.38 E-value=76 Score=31.46 Aligned_cols=85 Identities=15% Similarity=0.162 Sum_probs=45.6
Q ss_pred ceEEEEEcccCCCcc-hH-HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhH-HHHhcc---CCCEEEECC
Q 007496 297 PVRIAMVGKYTGLSD-AY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKA-AWKLLK---GADGILVPG 370 (601)
Q Consensus 297 ~v~IalVGkY~~l~D-aY-~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~-a~~~L~---~~DGIlvpG 370 (601)
..+|+++- ....+ .| ..+.+.++.+..+.+..+.+...+. +++.-.+ +...+. ++||||+.+
T Consensus 3 ~~~Ig~i~--p~~~~~~f~~~~~~g~~~~a~~~g~~~~~~~~~~----------~~~~~~~~i~~~i~~~~~vDgiIi~~ 70 (350)
T 3h75_A 3 LTSVVFLN--PGNSTETFWVSYSQFMQAAARDLGLDLRILYAER----------DPQNTLQQARELFQGRDKPDYLMLVN 70 (350)
T ss_dssp CCEEEEEE--CSCTTCHHHHHHHHHHHHHHHHHTCEEEEEECTT----------CHHHHHHHHHHHHHSSSCCSEEEEEC
T ss_pred CCEEEEEC--CCCCCChHHHHHHHHHHHHHHHcCCeEEEEECCC----------CHHHHHHHHHHHHhcCCCCCEEEEeC
Confidence 35788883 22333 44 4566666665555555444443221 1111111 222333 899999975
Q ss_pred CCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007496 371 GFGNRGVQGKILAAKYAREHRIPYLGIC 398 (601)
Q Consensus 371 GfG~rg~eg~i~aik~are~~iP~LGIC 398 (601)
. .. .....++.+.+.++|+.-+.
T Consensus 71 -~-~~---~~~~~~~~~~~~giPvV~~~ 93 (350)
T 3h75_A 71 -E-QY---VAPQILRLSQGSGIKLFIVN 93 (350)
T ss_dssp -C-SS---HHHHHHHHHTTSCCEEEEEE
T ss_pred -c-hh---hHHHHHHHHHhCCCcEEEEc
Confidence 1 11 22345677778899987764
No 269
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=34.38 E-value=24 Score=33.89 Aligned_cols=31 Identities=26% Similarity=0.507 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|-++||||- +|||+.+ .+.|-.+|++|...-
T Consensus 13 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~ 43 (252)
T 3f1l_A 13 RIILVTGAS-DGIGREA-----AMTYARYGATVILLG 43 (252)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7788754 456677899887653
No 270
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=34.30 E-value=41 Score=30.64 Aligned_cols=30 Identities=20% Similarity=0.207 Sum_probs=25.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRV 34 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v 34 (601)
+.|+++|. +|-||+..|..|...|...| +|
T Consensus 5 ~~I~i~G~--~GsGKsT~~~~L~~~l~~~g-~~ 34 (213)
T 2plr_A 5 VLIAFEGI--DGSGKSSQATLLKDWIELKR-DV 34 (213)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHTTTS-CE
T ss_pred eEEEEEcC--CCCCHHHHHHHHHHHHhhcC-CE
Confidence 58999996 88999999999998887666 44
No 271
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=34.24 E-value=24 Score=34.49 Aligned_cols=32 Identities=38% Similarity=0.459 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- +|||+.+ .+.|..+|++|...-.
T Consensus 23 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 54 (277)
T 2rhc_B 23 EVALVTGAT-SGIGLEI-----ARRLGKEGLRVFVCAR 54 (277)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999984 7888754 4567778998877643
No 272
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=34.09 E-value=1.5e+02 Score=28.98 Aligned_cols=84 Identities=11% Similarity=0.197 Sum_probs=41.2
Q ss_pred CceEEEEEcccCCCcchH-HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCC
Q 007496 296 EPVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 372 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY-~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGf 372 (601)
+..+|+++-. ...+.| ..+++.++.+..+.+..+.+.+.+. +++.-.+..+.+ .++||||+.+..
T Consensus 62 ~~~~Ig~i~~--~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~----------~~~~~~~~~~~l~~~~vdgiI~~~~~ 129 (332)
T 2o20_A 62 RTTTVGVILP--TITSTYFAAITRGVDDIASMYKYNMILANSDN----------DVEKEEKVLETFLSKQVDGIVYMGSS 129 (332)
T ss_dssp CCCEEEEEES--CTTCHHHHHHHHHHHHHHHHTTCEEEEEECTT----------CHHHHHHHHHHHHHTTCSEEEECSSC
T ss_pred CCCEEEEEeC--CCCCcHHHHHHHHHHHHHHHcCCEEEEEECCC----------ChHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 4568998842 233344 3455555544333333333332221 111111222333 589999998742
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 373 GNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 373 G~rg~eg~i~aik~are~~iP~LGI 397 (601)
.+ . ..++.+.+.++|+.-+
T Consensus 130 ~~---~---~~~~~l~~~~iPvV~~ 148 (332)
T 2o20_A 130 LD---E---KIRTSLKNSRTPVVLV 148 (332)
T ss_dssp CC---H---HHHHHHHHHCCCEEEE
T ss_pred CC---H---HHHHHHHhCCCCEEEE
Confidence 22 1 2345555678998765
No 273
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=34.07 E-value=26 Score=33.56 Aligned_cols=32 Identities=41% Similarity=0.571 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|-++||||- +|||+. +.+.|-.+|.+|...-.
T Consensus 3 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~r 34 (247)
T 3dii_A 3 RGVIVTGGG-HGIGKQ-----ICLDFLEAGDKVCFIDI 34 (247)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999986 777765 45667788999987643
No 274
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=33.90 E-value=1.2e+02 Score=29.78 Aligned_cols=33 Identities=9% Similarity=-0.146 Sum_probs=21.6
Q ss_pred cC--CCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 361 KG--ADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 361 ~~--~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGI 397 (601)
.+ +||||+.+... ......++.+.+.++|+.-+
T Consensus 60 ~~~~vdgiIi~~~~~----~~~~~~~~~~~~~~iPvV~~ 94 (332)
T 2rjo_A 60 KTGGNLVLNVDPNDS----ADARVIVEACSKAGAYVTTI 94 (332)
T ss_dssp HTTTCEEEEECCSSH----HHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCCCEEEEeCCCH----HHHHHHHHHHHHCCCeEEEE
Confidence 46 99999976321 12234566777778998765
No 275
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=33.89 E-value=25 Score=33.50 Aligned_cols=31 Identities=29% Similarity=0.375 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+ .+.+.|..+|++|...-
T Consensus 10 k~vlITGas-~giG~-----~~a~~l~~~G~~V~~~~ 40 (253)
T 3qiv_A 10 KVGIVTGSG-GGIGQ-----AYAEALAREGAAVVVAD 40 (253)
T ss_dssp CEEEEETTT-SHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHH-----HHHHHHHHCCCEEEEEc
Confidence 789999984 77776 45566778899987753
No 276
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=33.89 E-value=20 Score=34.78 Aligned_cols=30 Identities=17% Similarity=0.321 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.++||||- ||||+.+ .+.|-.+|.+|...
T Consensus 12 k~vlVTGas-~GIG~ai-----a~~la~~G~~V~~~ 41 (262)
T 3ksu_A 12 KVIVIAGGI-KNLGALT-----AKTFALESVNLVLH 41 (262)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHTTSSCEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 789999986 8888754 46677788887654
No 277
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=33.89 E-value=31 Score=33.78 Aligned_cols=33 Identities=18% Similarity=0.344 Sum_probs=24.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
|.++||||- +|||+.++ +.|..+|++|...-.+
T Consensus 22 k~vlVTGas-~gIG~aia-----~~La~~G~~V~~~~r~ 54 (272)
T 2nwq_A 22 STLFITGAT-SGFGEACA-----RRFAEAGWSLVLTGRR 54 (272)
T ss_dssp CEEEESSTT-TSSHHHHH-----HHHHHTTCEEEEEESC
T ss_pred cEEEEeCCC-CHHHHHHH-----HHHHHCCCEEEEEECC
Confidence 679999984 89998654 5567789998876443
No 278
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=33.83 E-value=23 Score=34.28 Aligned_cols=30 Identities=30% Similarity=0.541 Sum_probs=22.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.++||||- +|||+.++ +.|..+|++|...
T Consensus 12 k~~lVTGas-~gIG~~ia-----~~l~~~G~~V~~~ 41 (276)
T 1mxh_A 12 PAAVITGGA-RRIGHSIA-----VRLHQQGFRVVVH 41 (276)
T ss_dssp CEEEETTCS-SHHHHHHH-----HHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHHH-----HHHHHCCCEEEEE
Confidence 679999986 78887554 4566789887654
No 279
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=33.80 E-value=23 Score=35.00 Aligned_cols=31 Identities=32% Similarity=0.353 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+.+ .+.|..+|++|...=
T Consensus 10 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 10 PVALVTGAA-KRLGRSI-----AEGLHAEGYAVCLHY 40 (291)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCeEEEEc
Confidence 789999985 7888754 456777899987753
No 280
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=33.78 E-value=29 Score=34.91 Aligned_cols=32 Identities=34% Similarity=0.532 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.|+||||- ||||+.+ .+.|-.+|++|...=.
T Consensus 9 k~vlVTGas-~gIG~~l-----a~~l~~~G~~Vv~~~r 40 (319)
T 3ioy_A 9 RTAFVTGGA-NGVGIGL-----VRQLLNQGCKVAIADI 40 (319)
T ss_dssp CEEEEETTT-STHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEcCCc-hHHHHHH-----HHHHHHCCCEEEEEEC
Confidence 689999997 8888754 4566678999876543
No 281
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=33.75 E-value=25 Score=34.60 Aligned_cols=31 Identities=32% Similarity=0.535 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+. +.+.|-.+|++|...-
T Consensus 28 k~vlVTGas-~GIG~a-----ia~~l~~~G~~V~~~~ 58 (277)
T 4dqx_A 28 RVCIVTGGG-SGIGRA-----TAELFAKNGAYVVVAD 58 (277)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999985 788875 4566778899988753
No 282
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=33.73 E-value=24 Score=33.57 Aligned_cols=29 Identities=34% Similarity=0.496 Sum_probs=21.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (601)
|.++||||- ||||+.+ .+.|-.+|++|..
T Consensus 8 k~vlITGas-~gIG~~~-----a~~l~~~G~~v~~ 36 (255)
T 3icc_A 8 KVALVTGAS-RGIGRAI-----AKRLANDGALVAI 36 (255)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCeEEE
Confidence 789999996 7887754 4556678888765
No 283
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=33.71 E-value=28 Score=34.44 Aligned_cols=32 Identities=31% Similarity=0.608 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- +|||+. +.+.|-.+|.+|...-.
T Consensus 48 k~vlVTGas-~GIG~a-----ia~~la~~G~~V~~~~r 79 (291)
T 3ijr_A 48 KNVLITGGD-SGIGRA-----VSIAFAKEGANIAIAYL 79 (291)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999985 777764 45567788998876533
No 284
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=33.70 E-value=25 Score=31.20 Aligned_cols=25 Identities=16% Similarity=0.328 Sum_probs=19.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHH
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLL 27 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll 27 (601)
|+.|+++| .+|-||..+|.-+...|
T Consensus 2 ~~~I~l~G--~~GsGKsT~a~~La~~l 26 (173)
T 1e6c_A 2 TEPIFMVG--ARGCGMTTVGRELARAL 26 (173)
T ss_dssp CCCEEEES--CTTSSHHHHHHHHHHHH
T ss_pred CceEEEEC--CCCCCHHHHHHHHHHHh
Confidence 57899999 58999987777666544
No 285
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=33.68 E-value=25 Score=33.99 Aligned_cols=31 Identities=42% Similarity=0.703 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+.++ +.|..+|++|...-
T Consensus 14 k~vlVTGas-~gIG~~ia-----~~l~~~G~~V~~~~ 44 (267)
T 1iy8_A 14 RVVLITGGG-SGLGRATA-----VRLAAEGAKLSLVD 44 (267)
T ss_dssp CEEEEETTT-SHHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEEe
Confidence 789999984 88888654 55667899887653
No 286
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=33.64 E-value=22 Score=34.48 Aligned_cols=29 Identities=34% Similarity=0.678 Sum_probs=22.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (601)
|.++||||- +|||+.+ .+.|-.+|++|..
T Consensus 26 k~vlITGas-~gIG~~~-----a~~l~~~G~~v~~ 54 (269)
T 3gk3_A 26 RVAFVTGGM-GGLGAAI-----SRRLHDAGMAVAV 54 (269)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHTTTCEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEE
Confidence 789999986 8888755 4567778988755
No 287
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=33.60 E-value=25 Score=34.87 Aligned_cols=34 Identities=24% Similarity=0.428 Sum_probs=25.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (601)
|.++||||- ||||+. +.+.|-.+|.+|..+-.++
T Consensus 29 k~~lVTGas-~GIG~a-----ia~~la~~G~~V~~~~~~~ 62 (299)
T 3t7c_A 29 KVAFITGAA-RGQGRS-----HAITLAREGADIIAIDVCK 62 (299)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEECCS
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeccc
Confidence 789999985 788874 4566778899988765443
No 288
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=33.55 E-value=1.2e+02 Score=28.94 Aligned_cols=85 Identities=16% Similarity=0.170 Sum_probs=41.8
Q ss_pred CceEEEEEcccCCCcchH-HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCC
Q 007496 296 EPVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 372 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY-~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGf 372 (601)
+..+|+++-. ...+.| ..+++.++.+..+.+..+.+...+. +++.-.+..+.+ .++||||+.+..
T Consensus 19 ~~~~Ig~i~~--~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~----------~~~~~~~~~~~l~~~~vdgii~~~~~ 86 (293)
T 2iks_A 19 RTRSIGLVIP--DLENTSYTRIANYLERQARQRGYQLLIACSED----------QPDNEMRCIEHLLQRQVDAIIVSTSL 86 (293)
T ss_dssp CCCEEEEEES--CSCSHHHHHHHHHHHHHHHHTTCEEEEEECTT----------CHHHHHHHHHHHHHTTCSEEEECCSS
T ss_pred CCcEEEEEeC--CCcCcHHHHHHHHHHHHHHHCCCEEEEEcCCC----------CHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 4568998842 233344 3555555554444444333332211 111111222333 589999998743
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 373 GNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 373 G~rg~eg~i~aik~are~~iP~LGI 397 (601)
... . ..++.+.+.++|+.-+
T Consensus 87 ~~~--~---~~~~~~~~~~iPvV~~ 106 (293)
T 2iks_A 87 PPE--H---PFYQRWANDPFPIVAL 106 (293)
T ss_dssp CTT--C---HHHHTTTTSSSCEEEE
T ss_pred CCc--H---HHHHHHHhCCCCEEEE
Confidence 221 1 2345555678887654
No 289
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=33.54 E-value=25 Score=34.34 Aligned_cols=33 Identities=30% Similarity=0.447 Sum_probs=25.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
|.++||||- ||||+. +.+.|-.+|++|...-.+
T Consensus 12 k~~lVTGas-~gIG~a-----ia~~la~~G~~V~~~~~~ 44 (286)
T 3uve_A 12 KVAFVTGAA-RGQGRS-----HAVRLAQEGADIIAVDIC 44 (286)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCC-chHHHH-----HHHHHHHCCCeEEEEecc
Confidence 789999996 777764 556777889999876544
No 290
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=33.51 E-value=28 Score=34.19 Aligned_cols=30 Identities=30% Similarity=0.570 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|-++||||- +|||+. +.+.|..+|++|...
T Consensus 33 k~~lVTGas-~GIG~a-----ia~~la~~G~~V~~~ 62 (276)
T 3r1i_A 33 KRALITGAS-TGIGKK-----VALAYAEAGAQVAVA 62 (276)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999996 788875 446677889988765
No 291
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=33.49 E-value=25 Score=33.57 Aligned_cols=33 Identities=21% Similarity=0.489 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
|.++||||- +|||+.+ .+.|..+|++|...-.+
T Consensus 7 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r~ 39 (246)
T 2ag5_A 7 KVIILTAAA-QGIGQAA-----ALAFAREGAKVIATDIN 39 (246)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEECC
Confidence 789999985 7777654 45677789998876443
No 292
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=33.48 E-value=29 Score=33.68 Aligned_cols=33 Identities=27% Similarity=0.451 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
|-++||||- +|||+. +.+.|..+|++|...-.+
T Consensus 29 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r~ 61 (260)
T 3un1_A 29 KVVVITGAS-QGIGAG-----LVRAYRDRNYRVVATSRS 61 (260)
T ss_dssp CEEEESSCS-SHHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 789999986 777764 445677789999876543
No 293
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=33.40 E-value=25 Score=34.97 Aligned_cols=30 Identities=30% Similarity=0.475 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.|+||||- ||||+. +.+.|-.+|++|...
T Consensus 32 k~vlVTGas-~gIG~~-----la~~l~~~G~~V~~~ 61 (301)
T 3tjr_A 32 RAAVVTGGA-SGIGLA-----TATEFARRGARLVLS 61 (301)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 689999997 888875 455677789988765
No 294
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=33.33 E-value=1.1e+02 Score=29.69 Aligned_cols=83 Identities=16% Similarity=0.068 Sum_probs=44.2
Q ss_pred eEEEEEcccCCC--cchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCC
Q 007496 298 VRIAMVGKYTGL--SDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 375 (601)
Q Consensus 298 v~IalVGkY~~l--~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~r 375 (601)
-||+++..-... .+-+..+.++|+..|+++ ...|+... + +-+..+.+.+.++|+|++++ |.
T Consensus 141 ~~I~~i~~~~~~~~~~r~~g~~~al~~~gi~~----~~~~~~~~--~--------~~~~~~~~l~~~~dai~~~~---D~ 203 (302)
T 2qh8_A 141 KSIGVVYNPGEANAVSLMELLKLSAAKHGIKL----VEATALKS--A--------DVQSATQAIAEKSDVIYALI---DN 203 (302)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHTTCEE----EEEECSSG--G--------GHHHHHHHHGGGCSEEEECS---CH
T ss_pred cEEEEEecCCCcchHHHHHHHHHHHHHcCCEE----EEEecCCh--H--------HHHHHHHHHhccCCEEEECC---cH
Confidence 389999532210 112234566777776653 34455321 1 12333334457899999976 22
Q ss_pred chhHHHHHH-HHHHHcCCCEEEE
Q 007496 376 GVQGKILAA-KYAREHRIPYLGI 397 (601)
Q Consensus 376 g~eg~i~ai-k~are~~iP~LGI 397 (601)
-.-+.+.++ +.++..++|++|.
T Consensus 204 ~a~g~~~~l~~~~~~~~i~vig~ 226 (302)
T 2qh8_A 204 TVASAIEGMIVAANQAKTPVFGA 226 (302)
T ss_dssp HHHTTHHHHHHHHHHTTCCEEES
T ss_pred hHHHHHHHHHHHHHHcCCCEEEC
Confidence 222333433 3455678999985
No 295
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=33.22 E-value=32 Score=32.94 Aligned_cols=31 Identities=23% Similarity=0.306 Sum_probs=23.8
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv-~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.|+||||- -+|||+.++ +.|-.+|.+|...
T Consensus 15 k~vlITGa~~~~giG~~ia-----~~l~~~G~~V~~~ 46 (271)
T 3ek2_A 15 KRILLTGLLSNRSIAYGIA-----KACKREGAELAFT 46 (271)
T ss_dssp CEEEECCCCSTTSHHHHHH-----HHHHHTTCEEEEE
T ss_pred CEEEEeCCCCCCcHHHHHH-----HHHHHcCCCEEEE
Confidence 789999995 379998654 5566789888765
No 296
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=33.13 E-value=30 Score=33.01 Aligned_cols=32 Identities=28% Similarity=0.440 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.|+||||- +|||+.+ .+.|..+|++|..+-.
T Consensus 13 k~vlVTGas-ggiG~~~-----a~~l~~~G~~V~~~~r 44 (265)
T 2o23_A 13 LVAVITGGA-SGLGLAT-----AERLVGQGASAVLLDL 44 (265)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999994 7777754 4566778998877643
No 297
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=33.12 E-value=22 Score=34.55 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
|-++||||- +|||+. +.+.|..+|++|...-.+
T Consensus 28 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 28 APILITGAS-QRVGLH-----CALRLLEHGHRVIISYRT 60 (260)
T ss_dssp CCEEESSTT-SHHHHH-----HHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 679999985 777774 445677789998876443
No 298
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=33.05 E-value=26 Score=34.01 Aligned_cols=32 Identities=28% Similarity=0.507 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- +|||+.+ .+.|-.+|++|..+-.
T Consensus 14 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 45 (278)
T 3sx2_A 14 KVAFITGAA-RGQGRAH-----AVRLAADGADIIAVDL 45 (278)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCeEEEEec
Confidence 789999985 7888754 4567788999887643
No 299
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=33.02 E-value=26 Score=33.67 Aligned_cols=32 Identities=34% Similarity=0.406 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|-|+|||| -+|||+.+ .+.|..+|++|...-.
T Consensus 10 k~vlVTGa-s~giG~~i-----a~~l~~~G~~V~~~~r 41 (260)
T 2ae2_A 10 CTALVTGG-SRGIGYGI-----VEELASLGASVYTCSR 41 (260)
T ss_dssp CEEEEESC-SSHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECC-CcHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 78999998 47788754 4556678998876543
No 300
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=32.98 E-value=27 Score=33.13 Aligned_cols=31 Identities=35% Similarity=0.433 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+. +.+.|..+|++|..+-
T Consensus 12 k~vlITGas-ggiG~~-----la~~l~~~G~~V~~~~ 42 (254)
T 2wsb_A 12 ACAAVTGAG-SGIGLE-----ICRAFAASGARLILID 42 (254)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 689999985 777764 4556677899887753
No 301
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=32.95 E-value=26 Score=34.31 Aligned_cols=30 Identities=33% Similarity=0.481 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.++||||- +|||+.+ .+.|-.+|.+|...
T Consensus 32 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 61 (271)
T 3v2g_A 32 KTAFVTGGS-RGIGAAI-----AKRLALEGAAVALT 61 (271)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999985 7888754 45677789887653
No 302
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=32.93 E-value=25 Score=33.81 Aligned_cols=31 Identities=29% Similarity=0.520 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+.+ .+.|..+|++|...-
T Consensus 6 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 36 (260)
T 2qq5_A 6 QVCVVTGAS-RGIGRGI-----ALQLCKAGATVYITG 36 (260)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7788754 456777899887653
No 303
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=32.79 E-value=35 Score=33.16 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=27.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHC----CCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKAC----GLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~----g~~v~~~k 38 (601)
++|++.| ++|-||+..+.-|...|+.+ |++|...+
T Consensus 26 ~~I~~eG--~~GsGKsT~~~~l~~~l~~~~~~~g~~v~~~r 64 (227)
T 3v9p_A 26 KFITFEG--IDGAGKTTHLQWFCDRLQERLGPAGRHVVVTR 64 (227)
T ss_dssp CEEEEEC--CC---CHHHHHHHHHHHHHHHGGGTCCEEEEE
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHhhccccceeeeeec
Confidence 5889998 58999999999999999998 99986543
No 304
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=32.78 E-value=24 Score=34.15 Aligned_cols=32 Identities=31% Similarity=0.536 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- +|||+.+ .+.|..+|++|...=.
T Consensus 7 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 38 (278)
T 1spx_A 7 KVAIITGSS-NGIGRAT-----AVLFAREGAKVTITGR 38 (278)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999986 7888755 4556678998877543
No 305
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=32.71 E-value=27 Score=33.18 Aligned_cols=30 Identities=37% Similarity=0.579 Sum_probs=22.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.|+||||- +|||+.+ .+.|..+|++|..+
T Consensus 15 k~vlITGas-ggiG~~~-----a~~l~~~G~~V~~~ 44 (265)
T 1h5q_A 15 KTIIVTGGN-RGIGLAF-----TRAVAAAGANVAVI 44 (265)
T ss_dssp EEEEEETTT-SHHHHHH-----HHHHHHTTEEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCeEEEE
Confidence 789999984 7777654 45566788887655
No 306
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=32.66 E-value=25 Score=34.43 Aligned_cols=30 Identities=27% Similarity=0.464 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.++||||- ||||+.++ +.|-.+|.+|...
T Consensus 29 k~~lVTGas-~GIG~aia-----~~la~~G~~V~~~ 58 (270)
T 3ftp_A 29 QVAIVTGAS-RGIGRAIA-----LELARRGAMVIGT 58 (270)
T ss_dssp CEEEETTCS-SHHHHHHH-----HHHHHTTCEEEEE
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEE
Confidence 789999985 78887554 5677789988754
No 307
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=32.64 E-value=27 Score=34.29 Aligned_cols=33 Identities=33% Similarity=0.361 Sum_probs=24.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
|-++||||- +|||+.+ .+.|..+|++|...-.+
T Consensus 17 k~vlVTGas-~gIG~~~-----a~~L~~~G~~V~~~~r~ 49 (291)
T 3rd5_A 17 RTVVITGAN-SGLGAVT-----ARELARRGATVIMAVRD 49 (291)
T ss_dssp CEEEEECCS-SHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEECC
Confidence 679999997 7888654 45677789998876443
No 308
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=32.46 E-value=45 Score=31.76 Aligned_cols=71 Identities=18% Similarity=0.182 Sum_probs=48.8
Q ss_pred CCcEEEEeeCccccccCcchHHHHHHHHhhHcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhcCCCcccEEEEec
Q 007496 139 PVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRS 218 (601)
Q Consensus 139 ~~dv~i~e~ggtvgdies~pf~ea~rq~~~~~g~~n~~~ih~~~vp~~~~~~e~ktkptq~sv~~Lrs~Gi~pd~iv~R~ 218 (601)
++|++++|+||. + -+-.-|| .++..+++...++.+|.+-- ++.. ...|.+.-.+++++.++.++-+.++.
T Consensus 138 ~~Dvlil~~g~~-~---h~~~~~a-~~~~~~~~~k~vi~~H~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (220)
T 1vjn_A 138 EIDVLLVPVGGT-Y---TIGPKEA-KEVADLLNAKVIIPMHYKTK-YLKF----NLLPVDDFLKLFDSYERVGNILELFE 207 (220)
T ss_dssp CCSEEEEECCSS-S---SCCHHHH-HHHHHHTTCSEEEEESCCCS-SCCT----TCCCTHHHHTTSSCCEECCSEEEESS
T ss_pred CCCEEEEcCCCc-C---cCCHHHH-HHHHHhcCCCEEEEEecccc-cccC----CchhHHHHHHHHHhcCCCccceEEec
Confidence 589999999875 2 2333333 44455678889999999764 3321 25678888888888888777676665
Q ss_pred C
Q 007496 219 T 219 (601)
Q Consensus 219 ~ 219 (601)
.
T Consensus 208 ~ 208 (220)
T 1vjn_A 208 K 208 (220)
T ss_dssp C
T ss_pred C
Confidence 4
No 309
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=32.36 E-value=33 Score=32.96 Aligned_cols=33 Identities=27% Similarity=0.237 Sum_probs=25.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||-=||||+. +.+.|-.+|++|..+-.
T Consensus 23 k~vlITGasg~GIG~~-----~a~~l~~~G~~V~~~~r 55 (266)
T 3o38_A 23 KVVLVTAAAGTGIGST-----TARRALLEGADVVISDY 55 (266)
T ss_dssp CEEEESSCSSSSHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCCchHHH-----HHHHHHHCCCEEEEecC
Confidence 7899999976789985 45567778998877643
No 310
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=32.33 E-value=28 Score=33.47 Aligned_cols=34 Identities=32% Similarity=0.391 Sum_probs=25.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (601)
|-|+||||- +|||+.+ .+.|..+|++|...-.++
T Consensus 20 k~vlVTGas-~gIG~~~-----a~~l~~~G~~V~~~~r~~ 53 (249)
T 1o5i_A 20 KGVLVLAAS-RGIGRAV-----ADVLSQEGAEVTICARNE 53 (249)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEcCCH
Confidence 679999995 7888754 455677899998875554
No 311
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=32.31 E-value=1.3e+02 Score=28.38 Aligned_cols=31 Identities=16% Similarity=0.156 Sum_probs=20.7
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHH-cCCCEEEE
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYARE-HRIPYLGI 397 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are-~~iP~LGI 397 (601)
.++||||+.+...+ . ..++.+.+ .++|+.-+
T Consensus 76 ~~vdgii~~~~~~~---~---~~~~~l~~~~~iPvV~~ 107 (296)
T 3brq_A 76 LRCDAIMIYPRFLS---V---DEIDDIIDAHSQPIMVL 107 (296)
T ss_dssp TTCSEEEEECSSSC---H---HHHHHHHHTCSSCEEEE
T ss_pred cCCCEEEEecCCCC---h---HHHHHHHhcCCCCEEEE
Confidence 58999999764221 1 23556667 79998765
No 312
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=32.26 E-value=26 Score=32.95 Aligned_cols=29 Identities=38% Similarity=0.599 Sum_probs=21.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (601)
|.|+||||- +|||+. +.+.|..+|++|..
T Consensus 2 k~vlVTGas-ggiG~~-----la~~l~~~G~~v~~ 30 (244)
T 1edo_A 2 PVVVVTGAS-RGIGKA-----IALSLGKAGCKVLV 30 (244)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEE
T ss_pred CEEEEeCCC-chHHHH-----HHHHHHHCCCEEEE
Confidence 679999985 777764 44567778988765
No 313
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=32.26 E-value=26 Score=33.43 Aligned_cols=30 Identities=33% Similarity=0.524 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.++||||- +|||+.++ +.|..+|++|...
T Consensus 5 k~vlVTGas-~giG~~ia-----~~l~~~G~~V~~~ 34 (246)
T 2uvd_A 5 KVALVTGAS-RGIGRAIA-----IDLAKQGANVVVN 34 (246)
T ss_dssp CEEEETTCS-SHHHHHHH-----HHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHHHHH-----HHHHHCCCEEEEE
Confidence 789999986 88887654 5566789887654
No 314
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=32.26 E-value=25 Score=33.85 Aligned_cols=31 Identities=42% Similarity=0.686 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+. +.+.|..+|.+|...-
T Consensus 7 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~ 37 (257)
T 3imf_A 7 KVVIITGGS-SGMGKG-----MATRFAKEGARVVITG 37 (257)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999985 777765 4566778899887653
No 315
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=32.25 E-value=25 Score=34.63 Aligned_cols=31 Identities=39% Similarity=0.636 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|-++||||- +|||+.+ .+.|-.+|++|...-
T Consensus 34 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 64 (281)
T 4dry_A 34 RIALVTGGG-TGVGRGI-----AQALSAEGYSVVITG 64 (281)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEE
Confidence 679999985 7888755 455667899887653
No 316
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=32.08 E-value=91 Score=30.62 Aligned_cols=84 Identities=11% Similarity=0.175 Sum_probs=40.8
Q ss_pred CceEEEEEcccCCCcchH-HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCC
Q 007496 296 EPVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 372 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY-~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGf 372 (601)
+..+||++-.. ..+.| ..+++.++.+..+.+..+.+.+.+. +++.-.+..+.+ .++||||+.+..
T Consensus 59 ~~~~Ig~i~~~--~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~----------~~~~~~~~~~~l~~~~vdgiI~~~~~ 126 (332)
T 2hsg_A 59 KTTTVGVIIPD--ISNIFYAELARGIEDIATMYKYNIILSNSDQ----------NQDKELHLLNNMLGKQVDGIIFMSGN 126 (332)
T ss_dssp -CCEEEEEEC----CCSHHHHHHHHHHHHHHHHTCEEEEEECCS----------HHHHHHHHHHHTSCCSSCCEEECCSS
T ss_pred CCCEEEEEeCC--CCCcHHHHHHHHHHHHHHHcCCEEEEEeCCC----------ChHHHHHHHHHHHhCCCcEEEEecCC
Confidence 45689988422 23344 3555555544333333333332211 111111222333 579999998743
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 373 GNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 373 G~rg~eg~i~aik~are~~iP~LGI 397 (601)
.+ . ..++.+.+.++|+.-+
T Consensus 127 ~~---~---~~~~~l~~~~iPvV~~ 145 (332)
T 2hsg_A 127 VT---E---EHVEELKKSPVPVVLA 145 (332)
T ss_dssp CC---H---HHHHHHTTSSSCEEEE
T ss_pred CC---H---HHHHHHHhCCCCEEEE
Confidence 22 1 3455566678998765
No 317
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=31.99 E-value=2.1e+02 Score=28.13 Aligned_cols=84 Identities=15% Similarity=0.175 Sum_probs=46.1
Q ss_pred CceEEEEEcccCCCcc-hHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCC
Q 007496 296 EPVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 372 (601)
Q Consensus 296 ~~v~IalVGkY~~l~D-aY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGf 372 (601)
+.-+|+++=. ...+ -|..+++.++.+..+.+..+.+...+. +++.-.+..+.+ .++||||+.+..
T Consensus 67 ~~~~Ig~i~~--~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~----------~~~~~~~~i~~l~~~~vdGiIi~~~~ 134 (344)
T 3kjx_A 67 RVNLVAVIIP--SLSNMVFPEVLTGINQVLEDTELQPVVGVTDY----------LPEKEEKVLYEMLSWRPSGVIIAGLE 134 (344)
T ss_dssp CCSEEEEEES--CSSSSSHHHHHHHHHHHHTSSSSEEEEEECTT----------CHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEEeC--CCCcHHHHHHHHHHHHHHHHCCCEEEEEeCCC----------CHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 3457888832 2333 345677777776666665544433221 111111222222 489999998632
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 373 GNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 373 G~rg~eg~i~aik~are~~iP~LGI 397 (601)
.+ . ..++.+.+.++|+.-+
T Consensus 135 ~~---~---~~~~~l~~~~iPvV~i 153 (344)
T 3kjx_A 135 HS---E---AARAMLDAAGIPVVEI 153 (344)
T ss_dssp CC---H---HHHHHHHHCSSCEEEE
T ss_pred CC---H---HHHHHHHhCCCCEEEE
Confidence 21 1 3456677789998765
No 318
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=31.95 E-value=28 Score=33.50 Aligned_cols=32 Identities=28% Similarity=0.557 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- +|||+.+ .+.|..+|++|...-.
T Consensus 13 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 44 (263)
T 3ak4_A 13 RKAIVTGGS-KGIGAAI-----ARALDKAGATVAIADL 44 (263)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEeC
Confidence 679999985 7777754 4567778998876533
No 319
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=31.87 E-value=28 Score=33.24 Aligned_cols=32 Identities=34% Similarity=0.574 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- +|||+.++ +.|..+|++|...-.
T Consensus 6 k~vlVTGas-~giG~~ia-----~~l~~~G~~V~~~~r 37 (245)
T 1uls_A 6 KAVLITGAA-HGIGRATL-----ELFAKEGARLVACDI 37 (245)
T ss_dssp CEEEEESTT-SHHHHHHH-----HHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEEeC
Confidence 789999984 78887654 556778999887643
No 320
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=31.77 E-value=29 Score=33.32 Aligned_cols=30 Identities=37% Similarity=0.588 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|-++||||- +|||+.+ .+.|..+|++|...
T Consensus 5 k~vlVTGas-~giG~~i-----a~~l~~~G~~V~~~ 34 (255)
T 2q2v_A 5 KTALVTGST-SGIGLGI-----AQVLARAGANIVLN 34 (255)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999985 7777754 45677789988764
No 321
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=31.76 E-value=28 Score=33.37 Aligned_cols=31 Identities=35% Similarity=0.520 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+.+ .+.|..+|++|...-
T Consensus 3 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 33 (256)
T 1geg_A 3 KVALVTGAG-QGIGKAI-----ALRLVKDGFAVAIAD 33 (256)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7787754 456777899887653
No 322
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=31.75 E-value=26 Score=34.38 Aligned_cols=32 Identities=28% Similarity=0.417 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- +|||+.++ +.|-.+|++|...-.
T Consensus 24 k~~lVTGas-~gIG~aia-----~~L~~~G~~V~~~~r 55 (288)
T 2x9g_A 24 PAAVVTGAA-KRIGRAIA-----VKLHQTGYRVVIHYH 55 (288)
T ss_dssp CEEEETTCS-SHHHHHHH-----HHHHHHTCEEEEEES
T ss_pred CEEEEeCCC-CHHHHHHH-----HHHHHCCCeEEEEeC
Confidence 679999986 88888654 456667988876543
No 323
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=31.72 E-value=28 Score=32.55 Aligned_cols=33 Identities=27% Similarity=0.294 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCC--CeeEEeeec
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACG--LRVTCIKID 40 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g--~~v~~~k~d 40 (601)
|.|+||||- +|||+.+ .+.|..+| ++|..+-.+
T Consensus 4 k~vlItGas-ggiG~~l-----a~~l~~~g~~~~V~~~~r~ 38 (250)
T 1yo6_A 4 GSVVVTGAN-RGIGLGL-----VQQLVKDKNIRHIIATARD 38 (250)
T ss_dssp SEEEESSCS-SHHHHHH-----HHHHHTCTTCCEEEEEESS
T ss_pred CEEEEecCC-chHHHHH-----HHHHHhcCCCcEEEEEecC
Confidence 689999984 7777754 44566788 888776544
No 324
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=31.53 E-value=29 Score=33.44 Aligned_cols=31 Identities=26% Similarity=0.410 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|-++||||- +|||+. +.+.|..+|++|...-
T Consensus 9 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~ 39 (259)
T 4e6p_A 9 KSALITGSA-RGIGRA-----FAEAYVREGATVAIAD 39 (259)
T ss_dssp CEEEEETCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999985 777775 4456778899987753
No 325
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=31.47 E-value=28 Score=34.06 Aligned_cols=30 Identities=27% Similarity=0.416 Sum_probs=22.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|-++||||- +|||+.+ .+.|-.+|.+|...
T Consensus 32 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 61 (273)
T 3uf0_A 32 RTAVVTGAG-SGIGRAI-----AHGYARAGAHVLAW 61 (273)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 679999995 7888754 45667789887654
No 326
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=31.46 E-value=28 Score=33.64 Aligned_cols=31 Identities=29% Similarity=0.467 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+.++ +.|-.+|++|...=
T Consensus 30 k~vlITGas-~gIG~~la-----~~l~~~G~~V~~~~ 60 (262)
T 3rkr_A 30 QVAVVTGAS-RGIGAAIA-----RKLGSLGARVVLTA 60 (262)
T ss_dssp CEEEESSTT-SHHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHHHH-----HHHHHCCCEEEEEE
Confidence 789999985 88887654 55667799887653
No 327
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=31.43 E-value=28 Score=33.24 Aligned_cols=29 Identities=34% Similarity=0.594 Sum_probs=22.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (601)
|-++||||- +|||+.+ .+.|-.+|.+|..
T Consensus 5 k~~lVTGas-~gIG~~i-----a~~l~~~G~~V~~ 33 (246)
T 3osu_A 5 KSALVTGAS-RGIGRSI-----ALQLAEEGYNVAV 33 (246)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEE
Confidence 789999985 7888754 4567778988764
No 328
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=31.41 E-value=29 Score=33.86 Aligned_cols=32 Identities=38% Similarity=0.537 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- +|||+.+ .+.|..+|++|...-.
T Consensus 10 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 41 (270)
T 1yde_A 10 KVVVVTGGG-RGIGAGI-----VRAFVNSGARVVICDK 41 (270)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 689999985 7777754 4567778999887643
No 329
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=31.35 E-value=28 Score=34.41 Aligned_cols=32 Identities=28% Similarity=0.465 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|-++||||- ||||+.++ +.|-..|.+|...-.
T Consensus 8 KvalVTGas-~GIG~aiA-----~~la~~Ga~Vv~~~~ 39 (254)
T 4fn4_A 8 KVVIVTGAG-SGIGRAIA-----KKFALNDSIVVAVEL 39 (254)
T ss_dssp CEEEEETTT-SHHHHHHH-----HHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-CHHHHHHH-----HHHHHcCCEEEEEEC
Confidence 789999974 78888654 567788998876543
No 330
>2vos_A Folylpolyglutamate synthase protein FOLC; ligase, peptidoglycan synthesis, cell division; HET: ADP; 2.0A {Mycobacterium tuberculosis} PDB: 2vor_A*
Probab=31.29 E-value=42 Score=36.27 Aligned_cols=31 Identities=23% Similarity=0.231 Sum_probs=27.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (601)
|.|-|||- =|||.|++=|..+|++.|++|-.
T Consensus 65 ~vI~VtGT----NGKtST~~~l~~iL~~~G~~vG~ 95 (487)
T 2vos_A 65 PSIHIAGT----NGKTSVARMVDALVTALHRRTGR 95 (487)
T ss_dssp CEEEEECS----SSHHHHHHHHHHHHHHTTCCEEE
T ss_pred eEEEEeCC----CCcHHHHHHHHHHHHHcCCCeEE
Confidence 57888885 59999999999999999999853
No 331
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=31.27 E-value=29 Score=33.37 Aligned_cols=31 Identities=35% Similarity=0.470 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|-++||||- +|||+.+ .+.|..+|++|...-
T Consensus 8 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 38 (260)
T 2z1n_A 8 KLAVVTAGS-SGLGFAS-----ALELARNGARLLLFS 38 (260)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEEEe
Confidence 689999985 7777654 455667899887653
No 332
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=31.25 E-value=39 Score=33.26 Aligned_cols=32 Identities=19% Similarity=0.191 Sum_probs=29.9
Q ss_pred cCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007496 11 VSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (601)
Q Consensus 11 ~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (601)
-.|.||=.+|..+|..|..+|++|-.+-+||-
T Consensus 14 kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~q 45 (228)
T 2r8r_A 14 APGVGKTYAMLQAAHAQLRQGVRVMAGVVETH 45 (228)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCCT
T ss_pred CCCCcHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 47999999999999999999999999999985
No 333
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=31.22 E-value=45 Score=32.40 Aligned_cols=33 Identities=30% Similarity=0.427 Sum_probs=24.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
|| |+||||- |-+.+.+-..|..+|++|..+-.+
T Consensus 1 m~-vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r~ 33 (312)
T 3ko8_A 1 MR-IVVTGGA------GFIGSHLVDKLVELGYEVVVVDNL 33 (312)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CE-EEEECCC------ChHHHHHHHHHHhCCCEEEEEeCC
Confidence 45 8999974 556667777788899999887443
No 334
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=31.21 E-value=29 Score=33.88 Aligned_cols=32 Identities=44% Similarity=0.610 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|-++||||- +|||+. +.+.|-.+|++|...-.
T Consensus 12 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r 43 (281)
T 3svt_A 12 RTYLVTGGG-SGIGKG-----VAAGLVAAGASVMIVGR 43 (281)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 679999984 788875 44667778998877543
No 335
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=31.19 E-value=29 Score=34.16 Aligned_cols=31 Identities=32% Similarity=0.536 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+.+ .+.|..+|.+|...-
T Consensus 29 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 59 (283)
T 3v8b_A 29 PVALITGAG-SGIGRAT-----ALALAADGVTVGALG 59 (283)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999985 7777654 466777899887653
No 336
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=31.17 E-value=23 Score=34.88 Aligned_cols=31 Identities=32% Similarity=0.568 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- ||||+. +.+.|-.+|++|...-
T Consensus 9 k~vlVTGas-~GIG~a-----ia~~la~~G~~V~~~~ 39 (280)
T 3tox_A 9 KIAIVTGAS-SGIGRA-----AALLFAREGAKVVVTA 39 (280)
T ss_dssp CEEEESSTT-SHHHHH-----HHHHHHHTTCEEEECC
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEE
Confidence 679999985 788875 4556777899887653
No 337
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=31.12 E-value=30 Score=33.96 Aligned_cols=29 Identities=31% Similarity=0.513 Sum_probs=22.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (601)
|-++||||- +|||+. +.+.|-.+|++|..
T Consensus 26 k~~lVTGas-~GIG~~-----ia~~la~~G~~V~~ 54 (281)
T 3v2h_A 26 KTAVITGST-SGIGLA-----IARTLAKAGANIVL 54 (281)
T ss_dssp CEEEEETCS-SHHHHH-----HHHHHHHTTCEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEE
Confidence 789999985 777764 45667788988765
No 338
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=30.96 E-value=1.6e+02 Score=29.17 Aligned_cols=31 Identities=10% Similarity=0.216 Sum_probs=21.5
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGI 397 (601)
.++||||+.+...+ . ..++.+.+.++|+.-+
T Consensus 125 ~~vdGiI~~~~~~~---~---~~~~~l~~~~iPvV~i 155 (355)
T 3e3m_A 125 RRPEAMVLSYDGHT---E---QTIRLLQRASIPIVEI 155 (355)
T ss_dssp TCCSEEEEECSCCC---H---HHHHHHHHCCSCEEEE
T ss_pred CCCCEEEEeCCCCC---H---HHHHHHHhCCCCEEEE
Confidence 58999999764322 1 3456677789998765
No 339
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=30.94 E-value=33 Score=33.88 Aligned_cols=30 Identities=33% Similarity=0.481 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|-++||||- ||||+.+ ...|-..|.+|...
T Consensus 8 KvalVTGas-~GIG~ai-----a~~la~~Ga~Vv~~ 37 (258)
T 4gkb_A 8 KVVIVTGGA-SGIGGAI-----SMRLAEERAIPVVF 37 (258)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHcCCEEEEE
Confidence 789999985 8999865 45677788887654
No 340
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=30.90 E-value=1.3e+02 Score=28.57 Aligned_cols=31 Identities=13% Similarity=0.230 Sum_probs=19.6
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGIC 398 (601)
.++||||+.+...+ . ..++.+. .++|+.-+.
T Consensus 63 ~~vdgiI~~~~~~~---~---~~~~~l~-~~iPvV~~~ 93 (285)
T 3c3k_A 63 KMVDGVITMDALSE---L---PELQNII-GAFPWVQCA 93 (285)
T ss_dssp TCCSEEEECCCGGG---H---HHHHHHH-TTSSEEEES
T ss_pred CCCCEEEEeCCCCC---h---HHHHHHh-cCCCEEEEc
Confidence 58999999763211 1 2344555 789987653
No 341
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=30.88 E-value=30 Score=33.99 Aligned_cols=33 Identities=24% Similarity=0.461 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
|.++||||- ||||+.+ .+.|-.+|++|...=.+
T Consensus 10 k~vlVTGas-~GIG~ai-----a~~l~~~G~~V~~~~r~ 42 (285)
T 3sc4_A 10 KTMFISGGS-RGIGLAI-----AKRVAADGANVALVAKS 42 (285)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHTTTCEEEEEESC
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEECC
Confidence 789999986 8888754 46677789988776443
No 342
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=30.84 E-value=28 Score=34.38 Aligned_cols=31 Identities=29% Similarity=0.382 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|-++||||- ||||+. +.+.|-..|.+|...-
T Consensus 12 K~alVTGas-~GIG~a-----ia~~la~~Ga~V~~~~ 42 (261)
T 4h15_A 12 KRALITAGT-KGAGAA-----TVSLFLELGAQVLTTA 42 (261)
T ss_dssp CEEEESCCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeccC-cHHHHH-----HHHHHHHcCCEEEEEE
Confidence 789999984 888875 4567889999997653
No 343
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=30.76 E-value=28 Score=33.78 Aligned_cols=30 Identities=40% Similarity=0.561 Sum_probs=21.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.|+||||- +|||+. +.+.|-.+|++|..+
T Consensus 30 k~vlITGas-~gIG~~-----la~~l~~~G~~V~~~ 59 (271)
T 4iin_A 30 KNVLITGAS-KGIGAE-----IAKTLASMGLKVWIN 59 (271)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 679999985 777764 445666789887653
No 344
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=30.73 E-value=29 Score=33.75 Aligned_cols=29 Identities=41% Similarity=0.568 Sum_probs=22.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (601)
|.++||||- +|||+.+ .+.|..+|++|..
T Consensus 19 k~~lVTGas-~gIG~ai-----a~~l~~~G~~V~~ 47 (270)
T 3is3_A 19 KVALVTGSG-RGIGAAV-----AVHLGRLGAKVVV 47 (270)
T ss_dssp CEEEESCTT-SHHHHHH-----HHHHHHTTCEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEE
Confidence 789999985 7888754 4567778988765
No 345
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=30.71 E-value=23 Score=35.06 Aligned_cols=30 Identities=43% Similarity=0.459 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|-++||||- ||||+. +...|-..|.+|...
T Consensus 10 KvalVTGas-~GIG~a-----ia~~la~~Ga~Vvi~ 39 (255)
T 4g81_D 10 KTALVTGSA-RGLGFA-----YAEGLAAAGARVILN 39 (255)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEC
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999986 888875 457788899988764
No 346
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=30.71 E-value=30 Score=34.41 Aligned_cols=33 Identities=33% Similarity=0.669 Sum_probs=24.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
|-++||||- +|||+.+ .+.|..+|++|...-.+
T Consensus 42 k~vlVTGas-~GIG~ai-----a~~la~~G~~V~~~~r~ 74 (293)
T 3rih_A 42 RSVLVTGGT-KGIGRGI-----ATVFARAGANVAVAARS 74 (293)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEECC
Confidence 689999995 7788754 45677889988776443
No 347
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=30.55 E-value=37 Score=33.86 Aligned_cols=32 Identities=34% Similarity=0.451 Sum_probs=25.5
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv-~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- -+|||+.++ +.|-.+|.+|...-
T Consensus 10 k~~lVTGa~~s~GIG~aia-----~~la~~G~~Vv~~~ 42 (319)
T 2ptg_A 10 KTAFVAGVADSNGYGWAIC-----KLLRAAGARVLVGT 42 (319)
T ss_dssp CEEEEECCCCTTSHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEeCCCCCCcHHHHHH-----HHHHHCCCEEEEEe
Confidence 689999995 899998654 55777899988763
No 348
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=30.54 E-value=29 Score=33.89 Aligned_cols=32 Identities=31% Similarity=0.468 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.|+||||- +|||+-++ ..|.++|++|...-.
T Consensus 29 k~vlITGas-ggIG~~la-----~~l~~~G~~V~~~~r 60 (286)
T 1xu9_A 29 KKVIVTGAS-KGIGREMA-----YHLAKMGAHVVVTAR 60 (286)
T ss_dssp CEEEESSCS-SHHHHHHH-----HHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHHH-----HHHHHCCCEEEEEEC
Confidence 679999985 78887554 556678998877543
No 349
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=30.52 E-value=28 Score=34.94 Aligned_cols=30 Identities=33% Similarity=0.533 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.++||||- +|||+.+ .+.|-.+|.+|...
T Consensus 28 k~vlVTGas-~GIG~ai-----a~~la~~G~~Vv~~ 57 (322)
T 3qlj_A 28 RVVIVTGAG-GGIGRAH-----ALAFAAEGARVVVN 57 (322)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999986 8888754 45566789988775
No 350
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=30.52 E-value=31 Score=33.38 Aligned_cols=30 Identities=17% Similarity=0.354 Sum_probs=22.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|-++||||- ||||+. +.+.|-.+|++|...
T Consensus 9 k~vlVTGas-~GIG~a-----ia~~la~~G~~V~~~ 38 (259)
T 3edm_A 9 RTIVVAGAG-RDIGRA-----CAIRFAQEGANVVLT 38 (259)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCEEEEE
Confidence 689999985 777775 445677789887653
No 351
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=30.36 E-value=32 Score=34.03 Aligned_cols=30 Identities=43% Similarity=0.725 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|-++||||- ||||+.+ .+.|-..|.+|...
T Consensus 10 KvalVTGas-~GIG~ai-----A~~la~~Ga~Vvi~ 39 (247)
T 4hp8_A 10 RKALVTGAN-TGLGQAI-----AVGLAAAGAEVVCA 39 (247)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCcC-CHHHHHH-----HHHHHHcCCEEEEE
Confidence 679999985 8999865 47788999998764
No 352
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=30.30 E-value=33 Score=32.01 Aligned_cols=34 Identities=44% Similarity=0.734 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (601)
|-|+||||- +|||+.+ .+.|..+|++|..+-.++
T Consensus 3 k~vlVtGas-ggiG~~l-----a~~l~~~G~~V~~~~r~~ 36 (242)
T 1uay_A 3 RSALVTGGA-SGLGRAA-----ALALKARGYRVVVLDLRR 36 (242)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHHTCEEEEEESSC
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEccCc
Confidence 789999985 7777654 455667899998865443
No 353
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=30.24 E-value=37 Score=32.79 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+.+ .+.|-.+|++|...-
T Consensus 12 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~ 42 (264)
T 3ucx_A 12 KVVVISGVG-PALGTTL-----ARRCAEQGADLVLAA 42 (264)
T ss_dssp CEEEEESCC-TTHHHHH-----HHHHHHTTCEEEEEE
T ss_pred cEEEEECCC-cHHHHHH-----HHHHHHCcCEEEEEe
Confidence 789999994 7888755 455677899887653
No 354
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=30.20 E-value=1.3e+02 Score=29.64 Aligned_cols=98 Identities=16% Similarity=0.095 Sum_probs=48.0
Q ss_pred HHHHHHHHHhcCCCCceEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecC-CCcccccccCCchhhhHHHH-h
Q 007496 282 KEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPA-CDLEDATEKENPDAYKAAWK-L 359 (601)
Q Consensus 282 ~~w~~l~~~~~~~~~~v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s-~~le~~~~~~~p~~y~~a~~-~ 359 (601)
.+.-++..++.. ..-+|+++. .....+-....+.++.+.-..++++...++.. .++ ..+.+ .
T Consensus 127 ~~~l~l~~~l~P--~~k~vgvi~--~~~~~~s~~~~~~~~~~~~~~g~~~v~~~~~~~~~~------------~~~~~~l 190 (302)
T 3lkv_A 127 EQHVELIKEILP--NVKSIGVVY--NPGEANAVSLMELLKLSAAKHGIKLVEATALKSADV------------QSATQAI 190 (302)
T ss_dssp HHHHHHHHHHST--TCCEEEEEE--CTTCHHHHHHHHHHHHHHHHTTCEEEEEECSSGGGH------------HHHHHHH
T ss_pred HHHHHHHHHhCC--CCCEEEEEe--CCCcccHHHHHHHHHHHHHHcCCEEEEEecCChHHH------------HHHHHhc
Confidence 344455555432 234799984 33322323334444443333333333333332 222 12223 3
Q ss_pred ccCCCEEEECCCCCCCchhHHHHH-HHHHHHcCCCEEEEe
Q 007496 360 LKGADGILVPGGFGNRGVQGKILA-AKYAREHRIPYLGIC 398 (601)
Q Consensus 360 L~~~DGIlvpGGfG~rg~eg~i~a-ik~are~~iP~LGIC 398 (601)
..+.|+|+++. +......+.+ ...+.+.++|++|.-
T Consensus 191 ~~~~d~i~~~~---d~~~~~~~~~i~~~~~~~~iPv~~~~ 227 (302)
T 3lkv_A 191 AEKSDVIYALI---DNTVASAIEGMIVAANQAKTPVFGAA 227 (302)
T ss_dssp HTTCSEEEECS---CHHHHHTHHHHHHHHHHTTCCEEESS
T ss_pred cCCeeEEEEeC---CcchhhHHHHHHHHHhhcCCceeecc
Confidence 46899999886 2222222233 445677899999854
No 355
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=30.18 E-value=41 Score=33.17 Aligned_cols=31 Identities=26% Similarity=0.500 Sum_probs=21.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
||-|+||||- |-+.+.+-..|.++|++|..+
T Consensus 1 M~~vlVTGat------G~iG~~l~~~L~~~g~~V~~~ 31 (347)
T 1orr_A 1 MAKLLITGGC------GFLGSNLASFALSQGIDLIVF 31 (347)
T ss_dssp -CEEEEETTT------SHHHHHHHHHHHHTTCEEEEE
T ss_pred CcEEEEeCCC------chhHHHHHHHHHhCCCEEEEE
Confidence 6779999973 444556666677789988765
No 356
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=30.08 E-value=49 Score=30.52 Aligned_cols=35 Identities=23% Similarity=0.339 Sum_probs=27.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (601)
||-|+||||- |-+.+.+-..|.++|++|..+-.+|
T Consensus 4 m~~ilItGat------G~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGAS------GFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCC------HHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCC------chHHHHHHHHHHHCCCEEEEEEcCc
Confidence 4679999975 7777788888889999988875543
No 357
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=30.01 E-value=67 Score=30.56 Aligned_cols=32 Identities=19% Similarity=0.213 Sum_probs=19.6
Q ss_pred CCCEEEECCCCCCCchhHHHHHHHHHHHcCCC
Q 007496 362 GADGILVPGGFGNRGVQGKILAAKYAREHRIP 393 (601)
Q Consensus 362 ~~DGIlvpGGfG~rg~eg~i~aik~are~~iP 393 (601)
++|-||.+||-|--..+-..++++.+.+..+|
T Consensus 66 ~~DlVitTGGtg~g~~D~T~ea~~~~~~~~l~ 97 (195)
T 1di6_A 66 SCHLVLTTGGTGPARRDVTPDATLAVADREMP 97 (195)
T ss_dssp CCSEEEEESCCSSSTTCCHHHHHHHTCSEECH
T ss_pred CCCEEEECCCCCCCCCccHHHHHHHHhcccCc
Confidence 69999999985543322334556555444455
No 358
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=29.99 E-value=31 Score=33.76 Aligned_cols=31 Identities=35% Similarity=0.407 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+.+ .+.|-.+|.+|...-
T Consensus 25 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 55 (279)
T 3sju_A 25 QTAFVTGVS-SGIGLAV-----ARTLAARGIAVYGCA 55 (279)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999986 7788754 455667899887653
No 359
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=29.97 E-value=2.2e+02 Score=27.81 Aligned_cols=91 Identities=16% Similarity=0.124 Sum_probs=49.5
Q ss_pred CCceEEEEEcccCCCcchH-----HHHHHHHHHccc-cceeEEEEEeecCCCcccccccCCchhhhHHHHhc---cCCCE
Q 007496 295 HEPVRIAMVGKYTGLSDAY-----LSILKALLHASV-DLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL---KGADG 365 (601)
Q Consensus 295 ~~~v~IalVGkY~~l~DaY-----~SIi~aL~~ag~-~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L---~~~DG 365 (601)
.++++||++.........+ ..+..+++..+. -.+.++++.+.++.. +|+.-..+.+.| .++|+
T Consensus 4 ~~~i~IG~~~p~sg~~~~~g~~~~~g~~~a~~~~~~~i~G~~i~l~~~D~~~--------~~~~~~~~~~~li~~~~v~~ 75 (368)
T 4eyg_A 4 EDTFKVGLIVPMTGGQASTGKQIDNAIKLYIKKHGDTVAGKKIEVILKDDAA--------IPDNTKRLAQELIVNDKVNV 75 (368)
T ss_dssp CCEEEEEEEECSSSTTHHHHHHHHHHHHHHHHHHCSEETTEEEEEEEEECTT--------CHHHHHHHHHHHHHTSCCSE
T ss_pred CCcEEEEEEeCCcCcchhccHHHHHHHHHHHHHcCCCCCCeEEEEEEeCCCC--------CHHHHHHHHHHHHhcCCcEE
Confidence 3579999997553221112 234455555553 234566667666542 333322222333 58999
Q ss_pred EEECCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007496 366 ILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (601)
Q Consensus 366 IlvpGGfG~rg~eg~i~aik~are~~iP~LGIC 398 (601)
||-|-+ . .....++..+.+.++|++..+
T Consensus 76 iiG~~~--s---~~~~~~~~~~~~~~ip~i~~~ 103 (368)
T 4eyg_A 76 IAGFGI--T---PAALAAAPLATQAKVPEIVMA 103 (368)
T ss_dssp EEECSS--H---HHHHHHHHHHHHHTCCEEESS
T ss_pred EECCCc--c---HHHHHHHHHHHhCCceEEecc
Confidence 884432 1 223345566777899998875
No 360
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=29.97 E-value=28 Score=33.97 Aligned_cols=30 Identities=40% Similarity=0.629 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|-++||||- +|||+. +.+.|..+|++|...
T Consensus 29 k~vlVTGas-~gIG~a-----ia~~la~~G~~V~~~ 58 (266)
T 3uxy_A 29 KVALVTGAA-GGIGGA-----VVTALRAAGARVAVA 58 (266)
T ss_dssp CEEEESSTT-SHHHHH-----HHHHHHHTTCEEEEC
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 679999985 777764 456677889999875
No 361
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=29.94 E-value=34 Score=32.77 Aligned_cols=33 Identities=36% Similarity=0.517 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
|-|+||||- +|||+.+ .+.|..+|++|...-.+
T Consensus 16 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r~ 48 (247)
T 1uzm_A 16 RSVLVTGGN-RGIGLAI-----AQRLAADGHKVAVTHRG 48 (247)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 679999985 7777754 45677789999876443
No 362
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=29.87 E-value=76 Score=31.30 Aligned_cols=67 Identities=15% Similarity=0.163 Sum_probs=42.2
Q ss_pred CCceEEEEEcccCCCc---chHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEEC
Q 007496 295 HEPVRIAMVGKYTGLS---DAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVP 369 (601)
Q Consensus 295 ~~~v~IalVGkY~~l~---DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvp 369 (601)
.+.+||||+ .+.++. +++..+.+.|+..|+.-+..+++.+-++. .|+++-....+.| .++|.|+..
T Consensus 6 ~~~~~igi~-q~~~hp~ld~~~~G~~~~L~~~G~~~g~nv~~~~~~a~--------gd~~~~~~~~~~l~~~~~DlIiai 76 (302)
T 3lkv_A 6 AKTAKVAVS-QIVEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQ--------GNPAIAVQIARQFVGENPDVLVGI 76 (302)
T ss_dssp -CCEEEEEE-ESCCCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECT--------TCHHHHHHHHHHHHTTCCSEEEEE
T ss_pred cCCceEEEE-EeecChhHHHHHHHHHHHHHhhCcccCCcEEEEEEeCC--------CCHHHHHHHHHHHHhcCCcEEEEc
Confidence 367899999 688653 34456888999999876655566665554 2333333333334 589988754
Q ss_pred C
Q 007496 370 G 370 (601)
Q Consensus 370 G 370 (601)
+
T Consensus 77 ~ 77 (302)
T 3lkv_A 77 A 77 (302)
T ss_dssp S
T ss_pred C
Confidence 3
No 363
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=29.71 E-value=67 Score=28.77 Aligned_cols=33 Identities=27% Similarity=0.298 Sum_probs=26.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (601)
++|++||. +|-||=.++..+...|+..|+.+..
T Consensus 6 ~~i~l~G~--~GsGKST~~~~L~~~l~~~g~~~i~ 38 (179)
T 2pez_A 6 CTVWLTGL--SGAGKTTVSMALEEYLVCHGIPCYT 38 (179)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred cEEEEECC--CCCCHHHHHHHHHHHHhhCCCcEEE
Confidence 57899986 8899988888888888777876543
No 364
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=29.42 E-value=26 Score=34.49 Aligned_cols=40 Identities=18% Similarity=-0.020 Sum_probs=28.9
Q ss_pred HhccCCCEEEECCCCCC------------CchhHHHHHHHHHHHcCCCEEEE
Q 007496 358 KLLKGADGILVPGGFGN------------RGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 358 ~~L~~~DGIlvpGGfG~------------rg~eg~i~aik~are~~iP~LGI 397 (601)
+.|.++|.||+.+-... +..+..+.+++...+++..+++|
T Consensus 73 ~~L~~yDvIIl~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~~GGgll~i 124 (256)
T 2gk3_A 73 DELNRYDVIVISDIGSNTFLLQNETFYQLKIKPNALESIKEYVKNGGGLLMI 124 (256)
T ss_dssp HHHHTCSEEEEESCCHHHHHSCHHHHTTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred hHHhcCCEEEEeCCchhhcccccccccccccChHHHHHHHHHHHhCCEEEEE
Confidence 46889999999984321 00144567888777789999999
No 365
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=29.41 E-value=32 Score=33.03 Aligned_cols=30 Identities=37% Similarity=0.551 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.++||||- +|||+.+ .+.|..+|++|...
T Consensus 5 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~ 34 (260)
T 1x1t_A 5 KVAVVTGST-SGIGLGI-----ATALAAQGADIVLN 34 (260)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHcCCEEEEE
Confidence 789999984 7787754 45677789988765
No 366
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=29.40 E-value=32 Score=33.03 Aligned_cols=31 Identities=29% Similarity=0.380 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.|+||||- +|||+.+ .+.|..+|++|...-
T Consensus 15 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 45 (260)
T 2zat_A 15 KVALVTAST-DGIGLAI-----ARRLAQDGAHVVVSS 45 (260)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEe
Confidence 689999984 7777754 456777899887653
No 367
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=29.38 E-value=46 Score=31.98 Aligned_cols=25 Identities=32% Similarity=0.389 Sum_probs=18.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHH
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLL 27 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll 27 (601)
+..|.|||+ +|-||..+|.-|...|
T Consensus 22 ~~iI~I~G~--~GSGKST~a~~L~~~l 46 (252)
T 1uj2_A 22 PFLIGVSGG--TASGKSSVCAKIVQLL 46 (252)
T ss_dssp CEEEEEECS--TTSSHHHHHHHHHHHT
T ss_pred cEEEEEECC--CCCCHHHHHHHHHHHh
Confidence 356899997 5778988777665544
No 368
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=29.37 E-value=30 Score=31.49 Aligned_cols=31 Identities=13% Similarity=0.098 Sum_probs=22.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (601)
++|+++|+ +|-||...+.-+...| .|++|..
T Consensus 5 ~~I~l~G~--~GsGKsT~~~~L~~~l--~g~~~~~ 35 (204)
T 2v54_A 5 ALIVFEGL--DKSGKTTQCMNIMESI--PANTIKY 35 (204)
T ss_dssp CEEEEECC--TTSSHHHHHHHHHHTS--CGGGEEE
T ss_pred cEEEEEcC--CCCCHHHHHHHHHHHH--CCCceEE
Confidence 58999997 7889988777666544 2666544
No 369
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=29.29 E-value=33 Score=32.81 Aligned_cols=34 Identities=26% Similarity=0.280 Sum_probs=24.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCC---CeeEEeeec
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACG---LRVTCIKID 40 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g---~~v~~~k~d 40 (601)
+|.|+||||- +|||+.+ .+.|..+| ++|..+-.+
T Consensus 21 ~k~vlITGas-ggIG~~l-----a~~L~~~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 21 MNSILITGCN-RGLGLGL-----VKALLNLPQPPQHLFTTCRN 57 (267)
T ss_dssp CSEEEESCCS-SHHHHHH-----HHHHHTSSSCCSEEEEEESC
T ss_pred CCEEEEECCC-CcHHHHH-----HHHHHhcCCCCcEEEEEecC
Confidence 4789999984 7888654 45566778 888766443
No 370
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=29.23 E-value=33 Score=33.34 Aligned_cols=31 Identities=35% Similarity=0.460 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++|||| -+|||+.+ ...|..+|++|...-
T Consensus 22 k~vlVTGa-s~gIG~ai-----a~~l~~~G~~V~~~~ 52 (273)
T 1ae1_A 22 TTALVTGG-SKGIGYAI-----VEELAGLGARVYTCS 52 (273)
T ss_dssp CEEEEESC-SSHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECC-cchHHHHH-----HHHHHHCCCEEEEEe
Confidence 67999998 47788754 455677899887653
No 371
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=29.17 E-value=33 Score=33.28 Aligned_cols=32 Identities=22% Similarity=0.310 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|-|+||||- +|||+. +...|..+|++|...-.
T Consensus 32 k~vlITGas-ggIG~~-----la~~L~~~G~~V~~~~r 63 (272)
T 1yb1_A 32 EIVLITGAG-HGIGRL-----TAYEFAKLKSKLVLWDI 63 (272)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCEEEEEEc
Confidence 679999985 677764 45567778998876543
No 372
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=29.16 E-value=46 Score=32.18 Aligned_cols=32 Identities=19% Similarity=0.250 Sum_probs=25.0
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv-~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|-++||||- -+|||+.++ +.|..+|++|...=
T Consensus 8 k~vlVTGa~~s~gIG~aia-----~~l~~~G~~V~~~~ 40 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIA-----RVAQEQGAQLVLTG 40 (269)
T ss_dssp CEEEECCCSSTTSHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCCchHHHHH-----HHHHHCCCEEEEEe
Confidence 689999994 799998654 56777899887653
No 373
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=29.13 E-value=69 Score=30.82 Aligned_cols=81 Identities=14% Similarity=0.183 Sum_probs=40.9
Q ss_pred CceEEEEEcccCCCcchHH-HHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCC
Q 007496 296 EPVRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 372 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY~-SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGf 372 (601)
+..+||++= ...+.|. .+++.++.+..+.+..+.+.+.+.+.-+ .+..+.+ .++||||+.+..
T Consensus 11 ~~~~Igvi~---~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~-----------~~~~~~l~~~~vdgiIi~~~~ 76 (289)
T 3k9c_A 11 SSRLLGVVF---ELQQPFHGDLVEQIYAAATRRGYDVMLSAVAPSRAE-----------KVAVQALMRERCEAAILLGTR 76 (289)
T ss_dssp --CEEEEEE---ETTCHHHHHHHHHHHHHHHHTTCEEEEEEEBTTBCH-----------HHHHHHHTTTTEEEEEEETCC
T ss_pred CCCEEEEEE---ecCCchHHHHHHHHHHHHHHCCCEEEEEeCCCCHHH-----------HHHHHHHHhCCCCEEEEECCC
Confidence 345788884 3444443 5555555554444444444444332101 0111222 589999998743
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 373 GNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 373 G~rg~eg~i~aik~are~~iP~LGI 397 (601)
.+. ..++.+.+ ++|+.-+
T Consensus 77 ~~~------~~~~~~~~-~iPvV~i 94 (289)
T 3k9c_A 77 FDT------DELGALAD-RVPALVV 94 (289)
T ss_dssp CCH------HHHHHHHT-TSCEEEE
T ss_pred CCH------HHHHHHHc-CCCEEEE
Confidence 221 33444545 8898655
No 374
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=29.09 E-value=31 Score=34.55 Aligned_cols=31 Identities=29% Similarity=0.462 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+. +.+.|-.+|.+|..+-
T Consensus 47 k~~lVTGas-~GIG~a-----ia~~la~~G~~Vv~~~ 77 (317)
T 3oec_A 47 KVAFITGAA-RGQGRT-----HAVRLAQDGADIVAID 77 (317)
T ss_dssp CEEEESSCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCeEEEEe
Confidence 689999985 777765 4456778899988753
No 375
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=29.01 E-value=96 Score=30.92 Aligned_cols=31 Identities=16% Similarity=0.227 Sum_probs=19.7
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGI 397 (601)
.++||||+.+...+ . ..++.+.+.++|+.-+
T Consensus 121 ~~vdgiI~~~~~~~---~---~~~~~l~~~~iPvV~i 151 (348)
T 3bil_A 121 HGVDGIICVPNEEC---A---NQLEDLQKQGMPVVLV 151 (348)
T ss_dssp TTCSCEEECCCGGG---H---HHHHHHHHC-CCEEEE
T ss_pred CCCCEEEEeCCCCC---h---HHHHHHHhCCCCEEEE
Confidence 58999999773221 1 3455666778998655
No 376
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=29.00 E-value=2.3e+02 Score=27.68 Aligned_cols=91 Identities=8% Similarity=0.021 Sum_probs=42.3
Q ss_pred CCceEEEEEcccCCCcchH-HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCC
Q 007496 295 HEPVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGG 371 (601)
Q Consensus 295 ~~~v~IalVGkY~~l~DaY-~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGG 371 (601)
.+..+|+++=.. ...+.| ..+++.++.+..+.+..+.+.+.++.. + .+++.-.+..+.+ .++||||+++.
T Consensus 41 ~~~~~Igvi~~~-~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~-~-----~~~~~~~~~i~~l~~~~vdgiIi~~~ 113 (342)
T 1jx6_A 41 QRPIKISVVYPG-QQVSDYWVRNIASFEKRLYKLNINYQLNQVFTRP-N-----ADIKQQSLSLMEALKSKSDYLIFTLD 113 (342)
T ss_dssp SSCEEEEEEECC-CSSCCHHHHHHHHHHHHHHHTTCCEEEEEEECCT-T-----CCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred CCceEEEEEecC-CcccHHHHHHHHHHHHHHHHcCCeEEEEecCCCC-c-----cCHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 345689988422 023344 455555554443333333344333320 0 0111111122222 58999999542
Q ss_pred CCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 372 FGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 372 fG~rg~eg~i~aik~are~~iP~LGI 397 (601)
. + ... ..++.+.+.++|+.-+
T Consensus 114 ~-~-~~~---~~~~~~~~~~ip~V~~ 134 (342)
T 1jx6_A 114 T-T-RHR---KFVEHVLDSTNTKLIL 134 (342)
T ss_dssp S-S-TTH---HHHHHHHHHCSCEEEE
T ss_pred h-H-hHH---HHHHHHHHcCCCEEEE
Confidence 1 1 112 3455666678997654
No 377
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=28.83 E-value=31 Score=34.23 Aligned_cols=32 Identities=31% Similarity=0.540 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++|||| -+|||+.++ +.|..+|++|...-.
T Consensus 27 k~vlVTGa-s~gIG~aia-----~~L~~~G~~V~~~~r 58 (297)
T 1xhl_A 27 KSVIITGS-SNGIGRSAA-----VIFAKEGAQVTITGR 58 (297)
T ss_dssp CEEEETTC-SSHHHHHHH-----HHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CcHHHHHHH-----HHHHHCCCEEEEEeC
Confidence 67999998 478887654 566778998877543
No 378
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=28.79 E-value=33 Score=33.00 Aligned_cols=31 Identities=39% Similarity=0.548 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|-++||||- +|||+.+ .+.|..+|++|...-
T Consensus 6 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 36 (254)
T 1hdc_A 6 KTVIITGGA-RGLGAEA-----ARQAVAAGARVVLAD 36 (254)
T ss_dssp SEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999984 7777754 456777899987653
No 379
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=28.79 E-value=27 Score=34.24 Aligned_cols=30 Identities=33% Similarity=0.511 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.++||||- +|||+. +.+.|..+|.+|...
T Consensus 27 k~~lVTGas-~gIG~a-----ia~~la~~G~~V~~~ 56 (271)
T 4ibo_A 27 RTALVTGSS-RGLGRA-----MAEGLAVAGARILIN 56 (271)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEC
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999985 777775 456677889988764
No 380
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=28.76 E-value=42 Score=33.68 Aligned_cols=40 Identities=23% Similarity=0.270 Sum_probs=30.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCC--CeeEEe-eecccc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACG--LRVTCI-KIDPYL 43 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g--~~v~~~-k~dpyl 43 (601)
..|.|+|+ ||-||=.+|..|..+|...| .++..+ -.|+|+
T Consensus 32 ~ii~I~G~--sGsGKSTla~~L~~~l~~~g~~~~~~~iv~~D~f~ 74 (290)
T 1odf_A 32 LFIFFSGP--QGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFY 74 (290)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGGB
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHhhhcCCCCceEEEecccccc
Confidence 46788886 67789999999999998866 555555 777764
No 381
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}
Probab=28.75 E-value=57 Score=31.62 Aligned_cols=33 Identities=18% Similarity=0.321 Sum_probs=30.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHH-CCCeeEE
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKA-CGLRVTC 36 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~-~g~~v~~ 36 (601)
++|+++|. +|-||...+..+...|.. +|++|..
T Consensus 22 ~~i~~~G~--~g~GKst~~~~l~~~l~~~~g~~v~~ 55 (223)
T 3ld9_A 22 MFITFEGI--DGSGKTTQSHLLAEYLSEIYGVNNVV 55 (223)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHHHHCGGGEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHhhccCceeeE
Confidence 68999985 899999999999999999 9998876
No 382
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=28.64 E-value=51 Score=30.41 Aligned_cols=45 Identities=24% Similarity=0.326 Sum_probs=32.9
Q ss_pred eEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcc-ccccCcchHHHHHHHH
Q 007496 111 VQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALGQF 166 (601)
Q Consensus 111 vqviphit~~i~~~i~~~~~~~~d~~~~~~dv~i~e~ggt-vgdies~pf~ea~rq~ 166 (601)
..+||-= ++|++.|++... .+.|++|+ .||| +|+--=.| ||++++
T Consensus 46 ~~iv~Dd-~~i~~al~~a~~-------~~~DlVit-tGG~s~g~~D~t~--eal~~~ 91 (164)
T 3pzy_A 46 PEVVADG-SPVGEALRKAID-------DDVDVILT-SGGTGIAPTDSTP--DQTVAV 91 (164)
T ss_dssp CEEECSS-HHHHHHHHHHHH-------TTCSEEEE-ESCCSSSTTCCHH--HHHHTT
T ss_pred EEEeCCH-HHHHHHHHHHHh-------CCCCEEEE-CCCCCCCCCccHH--HHHHHH
Confidence 4688888 899999988752 35898876 7777 66654445 787776
No 383
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=28.54 E-value=29 Score=35.00 Aligned_cols=30 Identities=33% Similarity=0.475 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.++||||- +|||+.+ .+.|..+|.+|.+.
T Consensus 10 k~~lVTGas-~GIG~~~-----a~~La~~Ga~Vv~~ 39 (319)
T 1gz6_A 10 RVVLVTGAG-GGLGRAY-----ALAFAERGALVVVN 39 (319)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999986 8888865 45677789988764
No 384
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=28.51 E-value=35 Score=32.93 Aligned_cols=31 Identities=26% Similarity=0.381 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+.+ .+.|..+|++|...-
T Consensus 8 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 38 (262)
T 1zem_A 8 KVCLVTGAG-GNIGLAT-----ALRLAEEGTAIALLD 38 (262)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999984 7888754 456777899887654
No 385
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=28.48 E-value=2e+02 Score=27.70 Aligned_cols=31 Identities=19% Similarity=0.154 Sum_probs=20.5
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGI 397 (601)
.++||||+.+...+. . ..++.+.+ ++|+.-+
T Consensus 70 ~~vdgiI~~~~~~~~---~--~~~~~l~~-~iPvV~i 100 (303)
T 3kke_A 70 GRVDGVLLQRREDFD---D--DMLAAVLE-GVPAVTI 100 (303)
T ss_dssp CSSSEEEECCCTTCC---H--HHHHHHHT-TSCEEEE
T ss_pred CCCcEEEEecCCCCc---H--HHHHHHhC-CCCEEEE
Confidence 589999998753321 1 14556666 8998765
No 386
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=28.44 E-value=43 Score=30.36 Aligned_cols=27 Identities=30% Similarity=0.485 Sum_probs=18.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCe
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLR 33 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~ 33 (601)
++.|++||+ +|-||.. ++.+|..+|+.
T Consensus 8 ~~~I~i~G~--~GsGKST----~~~~La~~g~~ 34 (203)
T 1uf9_A 8 PIIIGITGN--IGSGKST----VAALLRSWGYP 34 (203)
T ss_dssp CEEEEEEEC--TTSCHHH----HHHHHHHTTCC
T ss_pred ceEEEEECC--CCCCHHH----HHHHHHHCCCE
Confidence 357899998 6778854 55566655643
No 387
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=28.42 E-value=28 Score=34.02 Aligned_cols=31 Identities=35% Similarity=0.595 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.|+||||- +|||+.++ +.|..+|++|...-
T Consensus 45 k~vlITGas-ggIG~~la-----~~L~~~G~~V~~~~ 75 (285)
T 2c07_A 45 KVALVTGAG-RGIGREIA-----KMLAKSVSHVICIS 75 (285)
T ss_dssp CEEEEESTT-SHHHHHHH-----HHHTTTSSEEEEEE
T ss_pred CEEEEECCC-cHHHHHHH-----HHHHHcCCEEEEEc
Confidence 679999986 78887654 45667898887643
No 388
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=28.41 E-value=52 Score=31.53 Aligned_cols=31 Identities=19% Similarity=0.266 Sum_probs=26.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeE
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVT 35 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~ 35 (601)
++|+++|. +|-||+..+.-|...|.. |+.|.
T Consensus 27 ~~i~i~G~--~GsGKsT~~~~l~~~l~~-~~~~~ 57 (229)
T 4eaq_A 27 AFITFEGP--EGSGKTTVINEVYHRLVK-DYDVI 57 (229)
T ss_dssp EEEEEECC--TTSCHHHHHHHHHHHHTT-TSCEE
T ss_pred eEEEEEcC--CCCCHHHHHHHHHHHHhc-CCCce
Confidence 68999995 899999999999999887 76654
No 389
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=28.37 E-value=47 Score=32.36 Aligned_cols=34 Identities=18% Similarity=0.330 Sum_probs=25.7
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 2 k~i~vtggv~-s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
|.++||||-- +|||+.+ .+.|-.+|++|...=.+
T Consensus 27 k~vlVTGasg~~GIG~~i-----a~~l~~~G~~V~~~~r~ 61 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGI-----AKAMHREGAELAFTYVG 61 (280)
T ss_dssp CEEEECCCCSTTCHHHHH-----HHHHHHTTCEEEEEECT
T ss_pred CEEEEECCCCCCCHHHHH-----HHHHHHcCCEEEEeeCc
Confidence 7899999854 7899865 45667789998876443
No 390
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=28.30 E-value=70 Score=30.17 Aligned_cols=32 Identities=9% Similarity=-0.077 Sum_probs=18.6
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGIC 398 (601)
.++||||+.+...+. ..++.+++.++|+.-+.
T Consensus 54 ~~vdgiI~~~~~~~~------~~~~~~~~~~iPvV~~~ 85 (276)
T 2h0a_A 54 YLTDGLILASYDLTE------RFEEGRLPTERPVVLVD 85 (276)
T ss_dssp CCCSEEEEESCCCC------------CCSCSSCEEEES
T ss_pred CCCCEEEEecCCCCH------HHHHHHhhcCCCEEEEe
Confidence 579999997743321 23555666789987653
No 391
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=28.22 E-value=35 Score=33.81 Aligned_cols=30 Identities=27% Similarity=0.399 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.|+||||- +|||+.++ +.|..+|++|...
T Consensus 35 k~vlVTGas-~gIG~aia-----~~L~~~G~~V~~~ 64 (291)
T 3cxt_A 35 KIALVTGAS-YGIGFAIA-----SAYAKAGATIVFN 64 (291)
T ss_dssp CEEEEETCS-SHHHHHHH-----HHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHHH-----HHHHHCCCEEEEE
Confidence 679999985 78887654 4566789988765
No 392
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=28.07 E-value=36 Score=33.19 Aligned_cols=32 Identities=28% Similarity=0.470 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- +|||+. +.+.|-.+|++|...-.
T Consensus 16 k~~lVTGas-~gIG~a-----~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 16 RVAFITGAA-RGQGRS-----HAVRLAAEGADIIACDI 47 (280)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEec
Confidence 789999985 677764 55667788999877644
No 393
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=28.02 E-value=31 Score=33.65 Aligned_cols=29 Identities=31% Similarity=0.536 Sum_probs=21.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~ 36 (601)
|.++||||- ||||+.+ .+.|-.+|++|..
T Consensus 28 k~~lVTGas-~GIG~ai-----a~~la~~G~~Vv~ 56 (267)
T 3u5t_A 28 KVAIVTGAS-RGIGAAI-----AARLASDGFTVVI 56 (267)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHHTCEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEE
Confidence 789999985 7777754 4556667888764
No 394
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=27.97 E-value=35 Score=33.72 Aligned_cols=30 Identities=33% Similarity=0.512 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.++||||- +|||+.+ .+.|-.+|++|...
T Consensus 50 k~vlVTGas-~GIG~ai-----a~~la~~G~~V~~~ 79 (294)
T 3r3s_A 50 RKALVTGGD-SGIGRAA-----AIAYAREGADVAIN 79 (294)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999994 7787754 45677789988753
No 395
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=27.90 E-value=36 Score=32.88 Aligned_cols=31 Identities=32% Similarity=0.419 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+.+ .+.|..+|++|...-
T Consensus 8 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 38 (260)
T 1nff_A 8 KVALVSGGA-RGMGASH-----VRAMVAEGAKVVFGD 38 (260)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999984 6777654 456777899988653
No 396
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=27.88 E-value=34 Score=32.70 Aligned_cols=30 Identities=33% Similarity=0.529 Sum_probs=21.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.|+||||- +|||+-++ +.|..+|++|..+
T Consensus 22 k~vlItGas-ggiG~~la-----~~l~~~G~~v~~~ 51 (274)
T 1ja9_A 22 KVALTTGAG-RGIGRGIA-----IELGRRGASVVVN 51 (274)
T ss_dssp CEEEETTTT-SHHHHHHH-----HHHHHTTCEEEEE
T ss_pred CEEEEeCCC-chHHHHHH-----HHHHHCCCEEEEE
Confidence 679999984 77776554 5567789887653
No 397
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=27.82 E-value=2.3e+02 Score=27.65 Aligned_cols=87 Identities=15% Similarity=0.150 Sum_probs=42.6
Q ss_pred CceEEEEEcccCCCcchH-HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCC
Q 007496 296 EPVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 372 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY-~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGf 372 (601)
+.-+||++-......+.| ..+++.++.+..+.+..+.+.+.+.+ ++.-.+..+.+ .++||||+.+..
T Consensus 60 ~~~~Igvi~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~----------~~~~~~~~~~l~~~~vdgiIi~~~~ 129 (338)
T 3dbi_A 60 STQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHS----------AEEERQAIQYLLDLRCDAIMIYPRF 129 (338)
T ss_dssp CCSEEEEEECTTTTSTTHHHHHHHHHHHHHHHTTCEEEEEECTTS----------HHHHHHHHHHHHHTTCSEEEECCSS
T ss_pred CCCEEEEEecCCcccChhHHHHHHHHHHHHHHCCCEEEEEeCCCC----------hHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 346788883221133344 35555555544444444444332211 11111122223 589999998743
Q ss_pred CCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 373 GNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 373 G~rg~eg~i~aik~are~~iP~LGI 397 (601)
.+ .+ ...+.+.+.++|+.-+
T Consensus 130 ~~--~~---~~~~~~~~~~iPvV~~ 149 (338)
T 3dbi_A 130 LS--VD---EIDDIIDAHSQPIMVL 149 (338)
T ss_dssp SC--HH---HHHHHHHHCSSCEEEE
T ss_pred CC--hH---HHHHHHHcCCCCEEEE
Confidence 22 11 2345556678897755
No 398
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=27.80 E-value=39 Score=32.17 Aligned_cols=31 Identities=19% Similarity=0.324 Sum_probs=22.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCe-eEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLR-VTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~-v~~~k 38 (601)
|-++|||| -+|||+.+ .+.|..+|++ |...-
T Consensus 6 k~vlVtGa-s~gIG~~~-----a~~l~~~G~~~v~~~~ 37 (254)
T 1sby_A 6 KNVIFVAA-LGGIGLDT-----SRELVKRNLKNFVILD 37 (254)
T ss_dssp CEEEEETT-TSHHHHHH-----HHHHHHTCCSEEEEEE
T ss_pred cEEEEECC-CChHHHHH-----HHHHHHCCCcEEEEEe
Confidence 67999998 48888754 4556678986 66543
No 399
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=27.77 E-value=43 Score=32.33 Aligned_cols=33 Identities=33% Similarity=0.466 Sum_probs=24.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
|-|+||||- +|||+. +.+.|..+|++|...-.+
T Consensus 22 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r~ 54 (253)
T 2nm0_A 22 RSVLVTGGN-RGIGLA-----IARAFADAGDKVAITYRS 54 (253)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 779999984 788775 446677889999876444
No 400
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=27.75 E-value=2.7e+02 Score=26.33 Aligned_cols=33 Identities=27% Similarity=0.304 Sum_probs=20.9
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGI 397 (601)
.++|||++.+.. .... ...++.+.+.++|+.-+
T Consensus 56 ~~vdgiIi~~~~-~~~~---~~~~~~~~~~~iPvV~~ 88 (283)
T 2ioy_A 56 QKVDVLLINPVD-SDAV---VTAIKEANSKNIPVITI 88 (283)
T ss_dssp TTCSEEEECCSS-TTTT---HHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEeCCc-hhhh---HHHHHHHHHCCCeEEEe
Confidence 589999997532 1111 23456677788998654
No 401
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=27.72 E-value=36 Score=33.39 Aligned_cols=30 Identities=33% Similarity=0.616 Sum_probs=21.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.++||||- +|||+.+ .+.|-.+|.+|...
T Consensus 30 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 59 (280)
T 4da9_A 30 PVAIVTGGR-RGIGLGI-----ARALAASGFDIAIT 59 (280)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEecCC-CHHHHHH-----HHHHHHCCCeEEEE
Confidence 679999984 6777754 45666788887654
No 402
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=27.68 E-value=33 Score=33.53 Aligned_cols=30 Identities=27% Similarity=0.453 Sum_probs=22.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.++||||- +|||+.++ +.|-.+|.+|...
T Consensus 28 k~~lVTGas-~GIG~aia-----~~l~~~G~~V~~~ 57 (277)
T 4fc7_A 28 KVAFITGGG-SGIGFRIA-----EIFMRHGCHTVIA 57 (277)
T ss_dssp CEEEEETTT-SHHHHHHH-----HHHHTTTCEEEEE
T ss_pred CEEEEeCCC-chHHHHHH-----HHHHHCCCEEEEE
Confidence 789999995 77877554 4566778888765
No 403
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=27.68 E-value=33 Score=33.56 Aligned_cols=30 Identities=37% Similarity=0.525 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.++||||- +|||+.+ .+.|..+|++|...
T Consensus 30 k~vlVTGas-~gIG~ai-----a~~L~~~G~~V~~~ 59 (276)
T 2b4q_A 30 RIALVTGGS-RGIGQMI-----AQGLLEAGARVFIC 59 (276)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEE
Confidence 789999984 7777754 45667789988765
No 404
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=27.64 E-value=36 Score=34.06 Aligned_cols=31 Identities=32% Similarity=0.416 Sum_probs=24.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|-++|||| -||||+.+ ...|-..|.+|...=
T Consensus 30 KvalVTGa-s~GIG~ai-----A~~la~~Ga~V~i~~ 60 (273)
T 4fgs_A 30 KIAVITGA-TSGIGLAA-----AKRFVAEGARVFITG 60 (273)
T ss_dssp CEEEEESC-SSHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCc-CCHHHHHH-----HHHHHHCCCEEEEEE
Confidence 67999998 58999864 567888999987653
No 405
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=27.56 E-value=89 Score=30.76 Aligned_cols=43 Identities=9% Similarity=-0.007 Sum_probs=29.6
Q ss_pred HhccCCCEEEECC-CCCCCchhHHHHHHHHHHHcCCCEEEEehh
Q 007496 358 KLLKGADGILVPG-GFGNRGVQGKILAAKYAREHRIPYLGICLG 400 (601)
Q Consensus 358 ~~L~~~DGIlvpG-GfG~rg~eg~i~aik~are~~iP~LGICLG 400 (601)
+.|+++|.||+-| ..++.-.+...++++...+++.+++||=-|
T Consensus 63 ~~L~~~DvvV~~~~~~~~~l~~~~~~al~~~V~~GgG~vgiH~a 106 (252)
T 1t0b_A 63 EVLDRCDVLVWWGHIAHDEVKDEVVERVHRRVLEGMGLIVLHSG 106 (252)
T ss_dssp HHHHTCSEEEEECSSCGGGSCHHHHHHHHHHHHTTCEEEEEGGG
T ss_pred hHHhcCCEEEEecCCCCCcCCHHHHHHHHHHHHcCCCEEEEccc
Confidence 4689999999832 122222345567787778889999999544
No 406
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=27.51 E-value=36 Score=32.42 Aligned_cols=30 Identities=30% Similarity=0.494 Sum_probs=22.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.|+||||- +|||+.+ .+.|..+|++|...
T Consensus 8 k~vlITGas-ggiG~~~-----a~~l~~~G~~V~~~ 37 (261)
T 1gee_A 8 KVVVITGSS-TGLGKSM-----AIRFATEKAKVVVN 37 (261)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEE
Confidence 689999985 7777654 45666779887654
No 407
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=27.51 E-value=2.1e+02 Score=28.60 Aligned_cols=79 Identities=10% Similarity=0.226 Sum_probs=48.7
Q ss_pred CceEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCC
Q 007496 296 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 375 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~r 375 (601)
+.-+|.+|| .-..+-..|.++-+++|+.. +.-.|+.-. |..... ..+..+|.|||.. +
T Consensus 103 ~~~~iLfVg---Tk~~aq~~V~~~A~~~g~~y---v~~RWlgG~-LTN~~~-----------~~f~~PdlliV~D----p 160 (253)
T 3bch_A 103 NPADVSVIS---SRNTGQRAVLKFAAATGATP---IAGRFTPGT-FTNQIQ-----------AAFREPRLLVVTD----P 160 (253)
T ss_dssp SGGGEEEEE---CSHHHHHHHHHHHHHHCCEE---EESCCCTTT-TTCCSC-----------STTCSCSEEEESC----T
T ss_pred CCCeEEEEe---CCHHHHHHHHHHHHHhCCee---ecceecCCc-ccCccc-----------cccCCCCEEEEEC----C
Confidence 344688887 12223345666666676653 234676532 322111 1246789999886 2
Q ss_pred chhHHHHHHHHHHHcCCCEEEEe
Q 007496 376 GVQGKILAAKYAREHRIPYLGIC 398 (601)
Q Consensus 376 g~eg~i~aik~are~~iP~LGIC 398 (601)
.. ...|+++|..-+||+.|||
T Consensus 161 ~~--e~~AI~EA~~lgIPvIalv 181 (253)
T 3bch_A 161 RA--DHQPLTEASYVNLPTIALC 181 (253)
T ss_dssp TT--THHHHHHHHHTTCCEEEEE
T ss_pred Cc--cchHHHHHHHhCCCEEEEE
Confidence 22 2468999999999999998
No 408
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=27.49 E-value=35 Score=33.23 Aligned_cols=30 Identities=30% Similarity=0.447 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|-++||||- +|||+.+ .+.|-.+|++|...
T Consensus 28 k~vlVTGas-~gIG~ai-----a~~la~~G~~V~~~ 57 (266)
T 3grp_A 28 RKALVTGAT-GGIGEAI-----ARCFHAQGAIVGLH 57 (266)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999985 7787754 46677889988765
No 409
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=27.44 E-value=34 Score=33.15 Aligned_cols=32 Identities=28% Similarity=0.459 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|-++||||- +|||+.+ .+.|-.+|.+|...-.
T Consensus 21 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~r 52 (266)
T 4egf_A 21 KRALITGAT-KGIGADI-----ARAFAAAGARLVLSGR 52 (266)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 679999995 7888754 4567788998876643
No 410
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=27.41 E-value=41 Score=33.46 Aligned_cols=33 Identities=24% Similarity=0.302 Sum_probs=26.0
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv-~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- -||||+.+ .+.|..+|.+|...-.
T Consensus 10 k~~lVTGa~~s~GIG~ai-----a~~la~~G~~Vv~~~r 43 (315)
T 2o2s_A 10 QTAFVAGVADSHGYGWAI-----AKHLASAGARVALGTW 43 (315)
T ss_dssp CEEEEECCSSSSSHHHHH-----HHHHHTTTCEEEEEEC
T ss_pred CEEEEeCCCCCCChHHHH-----HHHHHHCCCEEEEEec
Confidence 789999995 89999865 4567778999987643
No 411
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=27.35 E-value=38 Score=32.33 Aligned_cols=32 Identities=28% Similarity=0.465 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- +|||+ ++.+.|-.+|++|...-.
T Consensus 10 k~vlITGas-~gIG~-----~~a~~l~~~G~~V~~~~r 41 (261)
T 3n74_A 10 KVALITGAG-SGFGE-----GMAKRFAKGGAKVVIVDR 41 (261)
T ss_dssp CEEEEETTT-SHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chHHH-----HHHHHHHHCCCEEEEEcC
Confidence 789999996 77776 445667788999887643
No 412
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=27.35 E-value=39 Score=32.98 Aligned_cols=30 Identities=33% Similarity=0.473 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|-++||||- +|||+.++ +.|..+|++|...
T Consensus 30 k~vlVTGas-~gIG~~ia-----~~l~~~G~~V~~~ 59 (283)
T 1g0o_A 30 KVALVTGAG-RGIGREMA-----MELGRRGCKVIVN 59 (283)
T ss_dssp CEEEETTTT-SHHHHHHH-----HHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHHH-----HHHHHCCCEEEEE
Confidence 689999984 78887554 5566789988654
No 413
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=27.33 E-value=37 Score=33.26 Aligned_cols=31 Identities=32% Similarity=0.493 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.|+||||- +|||+.+ .+.|..+|++|..+=
T Consensus 19 k~vlVTGas-ggIG~~l-----a~~l~~~G~~V~~~~ 49 (303)
T 1yxm_A 19 QVAIVTGGA-TGIGKAI-----VKELLELGSNVVIAS 49 (303)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999984 7777654 455667899887653
No 414
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=27.32 E-value=41 Score=32.46 Aligned_cols=31 Identities=29% Similarity=0.327 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.|+|||| -+|||+.++ +.|..+|++|...-
T Consensus 35 k~vlITGa-sggIG~~la-----~~L~~~G~~V~~~~ 65 (279)
T 3ctm_A 35 KVASVTGS-SGGIGWAVA-----EAYAQAGADVAIWY 65 (279)
T ss_dssp CEEEETTT-TSSHHHHHH-----HHHHHHTCEEEEEE
T ss_pred CEEEEECC-CcHHHHHHH-----HHHHHCCCEEEEEe
Confidence 67999998 578888654 45666799887653
No 415
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=27.29 E-value=32 Score=32.96 Aligned_cols=30 Identities=47% Similarity=0.567 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.++||||- +|||+.+ .+.|..+|++|...
T Consensus 7 k~vlVTGas-~giG~~i-----a~~l~~~G~~V~~~ 36 (253)
T 1hxh_A 7 KVALVTGGA-SGVGLEV-----VKLLLGEGAKVAFS 36 (253)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 679999984 7777754 45677789988765
No 416
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=27.28 E-value=34 Score=34.59 Aligned_cols=31 Identities=35% Similarity=0.363 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+. +...|..+|++|...=
T Consensus 47 k~~lVTGas-~GIG~a-----ia~~La~~G~~Vv~~~ 77 (328)
T 2qhx_A 47 PVALVTGAA-KRLGRS-----IAEGLHAEGYAVCLHY 77 (328)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEc
Confidence 689999986 788875 4456778899987753
No 417
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=27.06 E-value=36 Score=32.12 Aligned_cols=32 Identities=28% Similarity=0.440 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.|+||||- +|||+ .+.+.|..+|++|...-.
T Consensus 7 k~vlVtGas-ggiG~-----~~a~~l~~~G~~V~~~~r 38 (251)
T 1zk4_A 7 KVAIITGGT-LGIGL-----AIATKFVEEGAKVMITGR 38 (251)
T ss_dssp CEEEETTTT-SHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred cEEEEeCCC-ChHHH-----HHHHHHHHCCCEEEEEeC
Confidence 689999983 66666 455567778998877643
No 418
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=27.04 E-value=36 Score=32.60 Aligned_cols=32 Identities=31% Similarity=0.451 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.|+|||| -+|||+.+ .+.|..+|++|...-.
T Consensus 15 k~vlITGa-sggiG~~l-----a~~l~~~G~~V~~~~r 46 (266)
T 1xq1_A 15 KTVLVTGG-TKGIGHAI-----VEEFAGFGAVIHTCAR 46 (266)
T ss_dssp CEEEETTT-TSHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECC-CCHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 77999998 57777654 4556678998877643
No 419
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=27.02 E-value=1.6e+02 Score=30.26 Aligned_cols=66 Identities=14% Similarity=0.191 Sum_probs=34.8
Q ss_pred CCceEEEEEcccC-CCcc-hHH-HHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEEC
Q 007496 295 HEPVRIAMVGKYT-GLSD-AYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVP 369 (601)
Q Consensus 295 ~~~v~IalVGkY~-~l~D-aY~-SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvp 369 (601)
.++.+||+| |. ...| +|. ++.+.++.+.-+.+-++++.++++.. +.+.+..+.+.+ +++|+||.+
T Consensus 24 ~~~~kIglv--~~g~i~D~~f~~~~~~G~~~~~~~~G~~~~~~~~e~~~--------~~~d~~~~l~~l~~~g~d~Ii~~ 93 (356)
T 3s99_A 24 EEKLKVGFI--YIGPPGDFGWTYQHDQARKELVEALGDKVETTFLENVA--------EGADAERSIKRIARAGNKLIFTT 93 (356)
T ss_dssp --CEEEEEE--CSSCGGGSSHHHHHHHHHHHHHHHHTTTEEEEEECSCC--------TTHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCCCEEEEE--EccCCCchhHHHHHHHHHHHHHHHhCCceEEEEEecCC--------CHHHHHHHHHHHHHCCCCEEEEC
Confidence 456899999 43 3445 564 46666666555444112345555421 112233333333 589999888
Q ss_pred C
Q 007496 370 G 370 (601)
Q Consensus 370 G 370 (601)
|
T Consensus 94 g 94 (356)
T 3s99_A 94 S 94 (356)
T ss_dssp S
T ss_pred C
Confidence 6
No 420
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=26.99 E-value=42 Score=33.93 Aligned_cols=30 Identities=37% Similarity=0.560 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.++||||- ||||+ ++.+.|-.+|++|...
T Consensus 6 k~vlVTGas-~GIG~-----aia~~L~~~G~~V~~~ 35 (324)
T 3u9l_A 6 KIILITGAS-SGFGR-----LTAEALAGAGHRVYAS 35 (324)
T ss_dssp CEEEESSCS-SHHHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHH-----HHHHHHHHCCCEEEEe
Confidence 689999985 77776 4556677889988654
No 421
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=26.78 E-value=33 Score=32.40 Aligned_cols=31 Identities=26% Similarity=0.537 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|-|+||||- +|||+.+ .+.|..+|++|..+-
T Consensus 12 ~~vlVtGas-ggiG~~l-----a~~l~~~G~~V~~~~ 42 (255)
T 1fmc_A 12 KCAIITGAG-AGIGKEI-----AITFATAGASVVVSD 42 (255)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHTTTCEEEEEE
T ss_pred CEEEEECCc-cHHHHHH-----HHHHHHCCCEEEEEc
Confidence 679999984 7777754 455667799887653
No 422
>1e8c_A UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; peptidoglycan biosynthesis; HET: KCX UAG API; 2.00A {Escherichia coli} SCOP: c.98.1.1 c.59.1.1 c.72.2.1
Probab=26.77 E-value=65 Score=34.61 Aligned_cols=33 Identities=24% Similarity=0.206 Sum_probs=28.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.|-||| +=||+.|++=|..+|++.|++|-.+.
T Consensus 109 ~vI~VTG----TnGKTTT~~ml~~iL~~~g~~~~~~g 141 (498)
T 1e8c_A 109 RLVGVTG----TNGKTTTTQLLAQWSQLLGEISAVMG 141 (498)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eEEEEeC----CcChHHHHHHHHHHHHhCCCCEEEEC
Confidence 6788888 56999999999999999999987654
No 423
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=26.75 E-value=1.9e+02 Score=28.86 Aligned_cols=90 Identities=11% Similarity=-0.005 Sum_probs=47.1
Q ss_pred CCceEEEEEcccCCCcchH-HHHH----HHHHH---ccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc---cCC
Q 007496 295 HEPVRIAMVGKYTGLSDAY-LSIL----KALLH---ASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL---KGA 363 (601)
Q Consensus 295 ~~~v~IalVGkY~~l~DaY-~SIi----~aL~~---ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L---~~~ 363 (601)
.++++||++...+.....+ ..+. -+++. .|--.+.++++.+.++. .+|+.-.++.+.| .++
T Consensus 5 ~~~i~IG~~~p~sG~~a~~g~~~~~g~~~a~~~iN~~ggi~G~~i~l~~~D~~--------~~~~~~~~~~~~li~~~~V 76 (392)
T 3lkb_A 5 QQQVTLFWSGAITGPTSDAGAPYGAAVEDYCKWANERKLVPGVVFNCVVRDDQ--------YNNANTQRFFEEAVDRFKI 76 (392)
T ss_dssp CEEEEEEEEECSSSTTHHHHHHHHHHHHHHHHHHHHHTSSTTEEEEEEEEECT--------TCHHHHHHHHHHHHHTTCC
T ss_pred CCceEEEEEecccCchhhcChhHHHHHHHHHHHHHhcCCcCCeEeEEEEecCC--------CCHHHHHHHHHHHHhhcCc
Confidence 3578999997554221112 1222 23332 22112456677776654 1333322333333 379
Q ss_pred CEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007496 364 DGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (601)
Q Consensus 364 DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGIC 398 (601)
|+||. ++. .....++..+.+.++|++..+
T Consensus 77 ~~iig---~~s---~~~~~~~~~~~~~~iP~i~~~ 105 (392)
T 3lkb_A 77 PVFLS---YAT---GANLQLKPLIQELRIPTIPAS 105 (392)
T ss_dssp SCEEE---CCH---HHHHHHHHHHHHHTCCEEESC
T ss_pred EEEEe---CCc---HHHHHHHHHHHhCCceEEecc
Confidence 99985 222 223345666777899999855
No 424
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=26.73 E-value=47 Score=30.85 Aligned_cols=37 Identities=22% Similarity=0.138 Sum_probs=29.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHH-HCCCeeEEeeec
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLK-ACGLRVTCIKID 40 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~-~~g~~v~~~k~d 40 (601)
++|+++|. +|-||-..+..|...|. ..|+++..+.-|
T Consensus 26 ~~i~~~G~--~GsGKsT~~~~l~~~l~~~~g~~~~~~~~d 63 (211)
T 1m7g_A 26 LTIWLTGL--SASGKSTLAVELEHQLVRDRRVHAYRLDGD 63 (211)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHHHHCCCEEEECHH
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHhccccCCcEEEECCh
Confidence 67899985 89999999999999998 888776555433
No 425
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=26.62 E-value=2.1e+02 Score=26.89 Aligned_cols=84 Identities=20% Similarity=0.252 Sum_probs=38.5
Q ss_pred CceEEEEEcccCCCcchH-HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCCC
Q 007496 296 EPVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGF 372 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY-~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGGf 372 (601)
+..+|+++-. ...+.| ..+++.++.+..+.+..+.+ .++.. +++.-.+..+.+ .++|||++.+..
T Consensus 6 ~~~~Ig~i~~--~~~~~~~~~~~~gi~~~~~~~g~~~~~--~~~~~--------~~~~~~~~~~~l~~~~vdgii~~~~~ 73 (289)
T 1dbq_A 6 HTKSIGLLAT--SSEAAYFAEIIEAVEKNCFQKGYTLIL--GNAWN--------NLEKQRAYLSMMAQKRVDGLLVMCSE 73 (289)
T ss_dssp --CEEEEEES--CTTSHHHHHHHHHHHHHHHHHTCEEEE--EECTT--------CHHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred CCCEEEEEeC--CCCChHHHHHHHHHHHHHHHcCCeEEE--EcCCC--------ChHHHHHHHHHHHhCCCCEEEEEecc
Confidence 3457998842 233344 35555555444333333333 22221 111211222333 589999997643
Q ss_pred CCCchhHHHHHHHHHHH-cCCCEEEE
Q 007496 373 GNRGVQGKILAAKYARE-HRIPYLGI 397 (601)
Q Consensus 373 G~rg~eg~i~aik~are-~~iP~LGI 397 (601)
.+ +.. ++.+.+ .++|+.-+
T Consensus 74 ~~---~~~---~~~l~~~~~iPvV~~ 93 (289)
T 1dbq_A 74 YP---EPL---LAMLEEYRHIPMVVM 93 (289)
T ss_dssp CC---HHH---HHHHHHTTTSCEEEE
T ss_pred CC---HHH---HHHHHhccCCCEEEE
Confidence 22 122 223333 57887655
No 426
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=26.46 E-value=59 Score=31.84 Aligned_cols=32 Identities=31% Similarity=0.440 Sum_probs=23.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
||-|+||||- |-+.+.+-..|..+|++|..+-
T Consensus 1 M~~ilVtGat------G~iG~~l~~~L~~~g~~V~~~~ 32 (330)
T 2c20_A 1 MNSILICGGA------GYIGSHAVKKLVDEGLSVVVVD 32 (330)
T ss_dssp -CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCC------cHHHHHHHHHHHhCCCEEEEEe
Confidence 6779999973 5556667777788899988753
No 427
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=26.42 E-value=39 Score=30.95 Aligned_cols=23 Identities=35% Similarity=0.414 Sum_probs=17.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHH
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGV 25 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ 25 (601)
|+.|.|||+ +|-||..++..|..
T Consensus 1 m~~i~i~G~--~GsGKSTl~~~L~~ 23 (204)
T 2if2_A 1 MKRIGLTGN--IGCGKSTVAQMFRE 23 (204)
T ss_dssp CCEEEEEEC--TTSSHHHHHHHHHH
T ss_pred CeEEEEECC--CCcCHHHHHHHHHH
Confidence 778999998 78899766555444
No 428
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=26.29 E-value=50 Score=31.98 Aligned_cols=32 Identities=16% Similarity=0.117 Sum_probs=24.4
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~-s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|-++||||-- +|||+.+ .+.|..+|++|...-
T Consensus 7 k~vlVTGas~~~gIG~~~-----a~~l~~~G~~V~~~~ 39 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGI-----AQSCFNQGATLAFTY 39 (275)
T ss_dssp CEEEEECCCSTTSHHHHH-----HHHHHTTTCEEEEEE
T ss_pred CEEEEECCCCCCcHHHHH-----HHHHHHCCCEEEEEe
Confidence 7899999963 8999865 455667899887653
No 429
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=26.26 E-value=2e+02 Score=27.59 Aligned_cols=87 Identities=11% Similarity=0.148 Sum_probs=43.6
Q ss_pred CCceEEEEEccc---CCCcchH-HHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEE
Q 007496 295 HEPVRIAMVGKY---TGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILV 368 (601)
Q Consensus 295 ~~~v~IalVGkY---~~l~DaY-~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlv 368 (601)
.+.-+||++=.. ....+.| ..+++.++.+..+.+..+.+.+.+.+ ++.-.+..+.+ .++||||+
T Consensus 5 ~~s~~Igvi~~~~~~~~~~~~f~~~~~~gi~~~a~~~g~~~~~~~~~~~----------~~~~~~~~~~l~~~~vdGiI~ 74 (295)
T 3hcw_A 5 NQTYKIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGYGTQTTVSNNM----------NDLMDEVYKMIKQRMVDAFIL 74 (295)
T ss_dssp CCSCEEEEECSCCCHHHHSCHHHHHHHHHHHHHHHTTTCEEEECCCCSH----------HHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCcEEEEEeecCCcccccChHHHHHHHHHHHHHHHCCCEEEEEcCCCC----------hHHHHHHHHHHHhCCcCEEEE
Confidence 345689988310 1122334 35666665555555444433332211 11111122333 58999999
Q ss_pred CCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 369 PGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 369 pGGfG~rg~eg~i~aik~are~~iP~LGI 397 (601)
.+...+. ..++.+.+.++|+.-+
T Consensus 75 ~~~~~~~------~~~~~l~~~~iPvV~i 97 (295)
T 3hcw_A 75 LYSKEND------PIKQMLIDESMPFIVI 97 (295)
T ss_dssp SCCCTTC------HHHHHHHHTTCCEEEE
T ss_pred cCcccCh------HHHHHHHhCCCCEEEE
Confidence 8743221 3455666778998654
No 430
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=26.23 E-value=29 Score=36.81 Aligned_cols=35 Identities=23% Similarity=0.396 Sum_probs=26.4
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCC-CEEEEehh
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRI-PYLGICLG 400 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~i-P~LGICLG 400 (601)
.++|.||+-||=| -++.+++.+...++ |+|||=+|
T Consensus 113 ~~~DlVIvlGGDG-----TlL~aa~~~~~~~vpPiLGIN~G 148 (388)
T 3afo_A 113 NRTDLLVTLGGDG-----TILHGVSMFGNTQVPPVLAFALG 148 (388)
T ss_dssp HHCSEEEEEESHH-----HHHHHHHTTTTSCCCCEEEEECS
T ss_pred cCCCEEEEEeCcH-----HHHHHHHHhcccCCCeEEEEECC
Confidence 4689999999733 25666777766678 89999876
No 431
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=26.16 E-value=40 Score=32.68 Aligned_cols=31 Identities=32% Similarity=0.525 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.++||||- +|||+.+ .+.|..+|++|...-
T Consensus 7 k~vlITGas-~gIG~ai-----a~~l~~~G~~V~~~~ 37 (263)
T 2a4k_A 7 KTILVTGAA-SGIGRAA-----LDLFAREGASLVAVD 37 (263)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEe
Confidence 689999984 7888765 455677899887753
No 432
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=26.07 E-value=56 Score=30.76 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=25.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCC-CeeEEeeecc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACG-LRVTCIKIDP 41 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g-~~v~~~k~dp 41 (601)
||-|+||||- ++||+ .|...|..+| ++|..+-.+|
T Consensus 23 mk~vlVtGat-G~iG~-----~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 23 MKNVLILGAG-GQIAR-----HVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp CEEEEEETTT-SHHHH-----HHHHHHTTCTTEEEEEEESSG
T ss_pred ccEEEEEeCC-cHHHH-----HHHHHHHhCCCceEEEEEcCh
Confidence 6889999974 44554 5556777889 8888776554
No 433
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=25.99 E-value=41 Score=32.24 Aligned_cols=31 Identities=29% Similarity=0.565 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.|+||||- +|||+-+ .+.|..+|++|...-
T Consensus 17 k~vlITGas-ggiG~~~-----a~~l~~~G~~V~~~~ 47 (278)
T 2bgk_A 17 KVAIITGGA-GGIGETT-----AKLFVRYGAKVVIAD 47 (278)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEc
Confidence 789999984 7777754 455667899887753
No 434
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=25.97 E-value=38 Score=32.99 Aligned_cols=31 Identities=32% Similarity=0.564 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|-++||||- +|||+.+ .+.|..+|++|...=
T Consensus 7 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 37 (280)
T 1xkq_A 7 KTVIITGSS-NGIGRTT-----AILFAQEGANVTITG 37 (280)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999984 7788765 455667899887653
No 435
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=25.79 E-value=39 Score=31.20 Aligned_cols=37 Identities=19% Similarity=0.278 Sum_probs=26.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln 44 (601)
+.|.|||+ ||-||..++..|..++. .+..+-.|+|+-
T Consensus 22 ~~i~i~G~--~GsGKSTl~~~L~~~~~----~~~~i~~D~~~~ 58 (207)
T 2qt1_A 22 FIIGISGV--TNSGKTTLAKNLQKHLP----NCSVISQDDFFK 58 (207)
T ss_dssp EEEEEEES--TTSSHHHHHHHHHTTST----TEEEEEGGGGBC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHhcC----CcEEEeCCcccc
Confidence 57889997 58889888777766442 467777788764
No 436
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=25.68 E-value=55 Score=31.88 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=24.2
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~-s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|-++||||-- +|||+.++ +.|..+|.+|...-
T Consensus 22 k~vlVTGas~~~gIG~~ia-----~~l~~~G~~V~~~~ 54 (285)
T 2p91_A 22 KRALITGVANERSIAYGIA-----KSFHREGAQLAFTY 54 (285)
T ss_dssp CEEEECCCSSTTSHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCCcHHHHHH-----HHHHHcCCEEEEEe
Confidence 6799999964 79998654 55667899887653
No 437
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=25.68 E-value=2.3e+02 Score=27.31 Aligned_cols=33 Identities=9% Similarity=-0.017 Sum_probs=20.5
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGIC 398 (601)
.++|+||.|. .. .....++..+.+.++|++.+.
T Consensus 68 ~~v~~iig~~---~s--~~~~~~~~~~~~~~ip~v~~~ 100 (346)
T 1usg_A 68 DGIKYVIGHL---CS--SSTQPASDIYEDEGILMISPG 100 (346)
T ss_dssp TTCCEEECCS---SH--HHHHHHHHHHHHHTCEEEECC
T ss_pred CCCCEEEcCC---Cc--HHHHHHHHHHHHCCCeEEeeC
Confidence 5899998433 11 122344566667799998764
No 438
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=25.56 E-value=2.2e+02 Score=27.76 Aligned_cols=33 Identities=27% Similarity=0.297 Sum_probs=21.9
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGI 397 (601)
.++|||++.+...+ .. ...++.+.+.++|+.-+
T Consensus 59 ~~vdgiii~~~~~~-~~---~~~~~~a~~~gipvV~~ 91 (316)
T 1tjy_A 59 QGYDAIIVSAVSPD-GL---CPALKRAMQRGVKILTW 91 (316)
T ss_dssp TTCSEEEECCSSSS-TT---HHHHHHHHHTTCEEEEE
T ss_pred cCCCEEEEeCCCHH-HH---HHHHHHHHHCcCEEEEe
Confidence 58999999763221 11 23566777889998765
No 439
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=25.56 E-value=56 Score=31.84 Aligned_cols=30 Identities=50% Similarity=0.633 Sum_probs=21.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|| |+||||- |-+.+.+...|.++|++|..+
T Consensus 1 m~-vlVTGat------G~iG~~l~~~L~~~G~~V~~~ 30 (311)
T 2p5y_A 1 MR-VLVTGGA------GFIGSHIVEDLLARGLEVAVL 30 (311)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHTTTCEEEEE
T ss_pred CE-EEEEeCC------cHHHHHHHHHHHHCCCEEEEE
Confidence 55 8999974 445556666677789998765
No 440
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=25.50 E-value=43 Score=30.51 Aligned_cols=22 Identities=36% Similarity=0.505 Sum_probs=16.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHH
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGV 25 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ 25 (601)
+.|++||+ +|-||..++.-+..
T Consensus 11 ~~I~l~G~--~GsGKSTv~~~La~ 32 (184)
T 1y63_A 11 INILITGT--PGTGKTSMAEMIAA 32 (184)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHH
T ss_pred CEEEEECC--CCCCHHHHHHHHHH
Confidence 57999997 78899766554444
No 441
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=25.48 E-value=58 Score=31.31 Aligned_cols=33 Identities=21% Similarity=0.268 Sum_probs=24.7
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~-s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|-++||||-- +|||+.+ .+.|..+|++|...-.
T Consensus 10 k~vlVTGas~~~gIG~~i-----a~~l~~~G~~V~~~~r 43 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGI-----AQAMHREGAELAFTYQ 43 (265)
T ss_dssp CEEEECCCCSTTSHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCCCCHHHHH-----HHHHHHCCCEEEEEcC
Confidence 6799999964 7999865 4567778998876533
No 442
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=25.48 E-value=39 Score=32.61 Aligned_cols=35 Identities=29% Similarity=0.386 Sum_probs=26.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (601)
||-|+||||- ++||+- +...|..+|++|...-.++
T Consensus 3 ~k~vlVTGas-g~IG~~-----la~~L~~~G~~V~~~~r~~ 37 (267)
T 3rft_A 3 MKRLLVTGAA-GQLGRV-----MRERLAPMAEILRLADLSP 37 (267)
T ss_dssp EEEEEEESTT-SHHHHH-----HHHHTGGGEEEEEEEESSC
T ss_pred CCEEEEECCC-CHHHHH-----HHHHHHhcCCEEEEEecCC
Confidence 4789999985 666664 5566778899998876665
No 443
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=25.44 E-value=36 Score=32.78 Aligned_cols=30 Identities=23% Similarity=0.484 Sum_probs=22.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|-++||||- +|||+.+ .+.|-.+|++|...
T Consensus 13 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~ 42 (256)
T 3gaf_A 13 AVAIVTGAA-AGIGRAI-----AGTFAKAGASVVVT 42 (256)
T ss_dssp CEEEECSCS-SHHHHHH-----HHHHHHHTCEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEE
Confidence 679999985 7777754 45566779988765
No 444
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=25.36 E-value=2e+02 Score=28.58 Aligned_cols=81 Identities=15% Similarity=0.042 Sum_probs=48.1
Q ss_pred eEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCCch
Q 007496 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 377 (601)
Q Consensus 298 v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~rg~ 377 (601)
.++.||+.-. ..+.-..+.++|+..|+++.+ ++.+++.. ++ +.|.++|.||++.-....-.
T Consensus 5 ~~vLiV~g~~-~~~~a~~l~~aL~~~g~~V~~------i~~~~~~~-----~~-------~~L~~yDvIIl~d~~~~~l~ 65 (259)
T 3rht_A 5 TRVLYCGDTS-LETAAGYLAGLMTSWQWEFDY------IPSHVGLD-----VG-------ELLAKQDLVILSDYPAERMT 65 (259)
T ss_dssp -CEEEEESSC-TTTTHHHHHHHHHHTTCCCEE------ECTTSCBC-----SS-------HHHHTCSEEEEESCCGGGBC
T ss_pred ceEEEECCCC-chhHHHHHHHHHHhCCceEEE------eccccccc-----Ch-------hHHhcCCEEEEcCCccccCC
Confidence 4688886211 123445688899999988644 45554421 11 56899999999862221112
Q ss_pred hHHHHHHHHHHHcCCCEEEE
Q 007496 378 QGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 378 eg~i~aik~are~~iP~LGI 397 (601)
+..+++++...+++-=++.+
T Consensus 66 ~~~~~~L~~yV~~GGgLi~~ 85 (259)
T 3rht_A 66 AQAIDQLVTMVKAGCGLVML 85 (259)
T ss_dssp HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhCCeEEEe
Confidence 45566676666666555544
No 445
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=25.29 E-value=39 Score=33.06 Aligned_cols=32 Identities=38% Similarity=0.522 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- +|||+.+ .+.|-.+|++|...-.
T Consensus 29 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~r 60 (272)
T 4dyv_A 29 KIAIVTGAG-SGVGRAV-----AVALAGAGYGVALAGR 60 (272)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEEC
Confidence 679999985 7777754 4567778998877643
No 446
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=25.23 E-value=44 Score=33.45 Aligned_cols=41 Identities=22% Similarity=0.425 Sum_probs=31.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln 44 (601)
+.|.|||| ||-||..+|..+...|...|+++..+-.|-|-.
T Consensus 6 ~iIgItG~--sGSGKSTva~~L~~~lg~~~~~~~vI~~D~~~r 46 (290)
T 1a7j_A 6 PIISVTGS--SGAGTSTVKHTFDQIFRREGVKAVSIEGDAFHR 46 (290)
T ss_dssp CEEEEESC--C---CCTHHHHHHHHHHHHTCCEEEEEGGGGBS
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHhhcCCCeeEeecchhhc
Confidence 36889996 788999999999998888888888888777653
No 447
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=24.92 E-value=55 Score=32.07 Aligned_cols=35 Identities=26% Similarity=0.291 Sum_probs=26.1
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007496 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (601)
Q Consensus 2 k~i~vtggv-~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (601)
|.++||||- -||||+.++ +.|..+|.+|...-.+|
T Consensus 9 k~~lVTGas~~~GIG~aia-----~~la~~G~~V~~~~r~~ 44 (297)
T 1d7o_A 9 KRAFIAGIADDNGYGWAVA-----KSLAAAGAEILVGTWVP 44 (297)
T ss_dssp CEEEEECCSSSSSHHHHHH-----HHHHHTTCEEEEEEEHH
T ss_pred CEEEEECCCCCCChHHHHH-----HHHHHCCCeEEEeeccc
Confidence 679999996 489998654 55677899998764443
No 448
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=24.85 E-value=43 Score=32.03 Aligned_cols=31 Identities=19% Similarity=0.307 Sum_probs=22.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHH---CCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKA---CGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~---~g~~v~~~k 38 (601)
|.++||||- +|||+.++ +.|.. +|++|...=
T Consensus 7 k~~lVTGas-~gIG~~ia-----~~l~~~~~~G~~V~~~~ 40 (259)
T 1oaa_A 7 AVCVLTGAS-RGFGRALA-----PQLARLLSPGSVMLVSA 40 (259)
T ss_dssp EEEEESSCS-SHHHHHHH-----HHHHTTBCTTCEEEEEE
T ss_pred cEEEEeCCC-ChHHHHHH-----HHHHHhhcCCCeEEEEe
Confidence 789999985 77877553 44544 798887653
No 449
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=24.68 E-value=82 Score=32.69 Aligned_cols=44 Identities=18% Similarity=0.199 Sum_probs=32.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc---ccCCCCCCCc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY---LNTDAGTMSP 52 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy---ln~d~gtmsp 52 (601)
+.|+|+|+ ||-||-.+|..|...|. +..|-.|-| -..|-||-.|
T Consensus 8 ~lI~I~Gp--tgSGKTtla~~La~~l~-----~~iis~Ds~qvYr~~~i~Takp 54 (340)
T 3d3q_A 8 FLIVIVGP--TASGKTELSIEVAKKFN-----GEIISGDSMQVYQGMDIGTAKV 54 (340)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHTT-----EEEEECCSSTTBTTCCTTTTCC
T ss_pred ceEEEECC--CcCcHHHHHHHHHHHcC-----CceeccccccccccccccccCC
Confidence 37889997 77789888877766543 678888884 6677777554
No 450
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=24.67 E-value=2.1e+02 Score=27.21 Aligned_cols=33 Identities=15% Similarity=0.160 Sum_probs=20.9
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGI 397 (601)
.++|||++.+.. .... ...++.+++.++|+.-+
T Consensus 58 ~~vdgiIi~~~~-~~~~---~~~~~~~~~~~iPvV~~ 90 (288)
T 1gud_A 58 KNYKGIAFAPLS-SVNL---VMPVARAWKKGIYLVNL 90 (288)
T ss_dssp SSEEEEEECCSS-SSTT---HHHHHHHHHTTCEEEEE
T ss_pred cCCCEEEEeCCC-hHHH---HHHHHHHHHCCCeEEEE
Confidence 579999997632 1222 12456667788998654
No 451
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=24.38 E-value=72 Score=28.91 Aligned_cols=33 Identities=27% Similarity=0.316 Sum_probs=23.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (601)
|| |+||||- ++||+.++ +.|. +|++|..+-.++
T Consensus 4 M~-vlVtGas-g~iG~~~~-----~~l~-~g~~V~~~~r~~ 36 (202)
T 3d7l_A 4 MK-ILLIGAS-GTLGSAVK-----ERLE-KKAEVITAGRHS 36 (202)
T ss_dssp CE-EEEETTT-SHHHHHHH-----HHHT-TTSEEEEEESSS
T ss_pred cE-EEEEcCC-cHHHHHHH-----HHHH-CCCeEEEEecCc
Confidence 56 8999984 66776554 4455 799999875554
No 452
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=24.38 E-value=45 Score=32.52 Aligned_cols=30 Identities=40% Similarity=0.682 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|-|+||||- +|||+.+ .+.|..+|++|..+
T Consensus 27 k~vlITGas-ggiG~~l-----a~~L~~~G~~V~~~ 56 (302)
T 1w6u_A 27 KVAFITGGG-TGLGKGM-----TTLLSSLGAQCVIA 56 (302)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 679999985 6777654 45667789988776
No 453
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=24.37 E-value=47 Score=32.85 Aligned_cols=34 Identities=29% Similarity=0.341 Sum_probs=22.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (601)
++.|.|||+ +|-||..+|.-+. ..|+.| +-.|.+
T Consensus 75 ~~iI~I~G~--~GSGKSTva~~La----~lg~~~--id~D~~ 108 (281)
T 2f6r_A 75 LYVLGLTGI--SGSGKSSVAQRLK----NLGAYI--IDSDHL 108 (281)
T ss_dssp CEEEEEEEC--TTSCHHHHHHHHH----HHTCEE--EEHHHH
T ss_pred CEEEEEECC--CCCCHHHHHHHHH----HCCCcE--EehhHH
Confidence 467999997 6778976665554 457644 555554
No 454
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=24.32 E-value=74 Score=29.93 Aligned_cols=33 Identities=15% Similarity=0.217 Sum_probs=25.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHH--CCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKA--CGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~--~g~~v~~~k 38 (601)
|.+|+||- .|+|-|.+.++++... +|.+|-++|
T Consensus 9 ~i~v~~G~----mgsGKTT~ll~~a~r~~~~g~kV~v~k 43 (191)
T 1xx6_A 9 WVEVIVGP----MYSGKSEELIRRIRRAKIAKQKIQVFK 43 (191)
T ss_dssp EEEEEECS----TTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEECC----CCCcHHHHHHHHHHHHHHCCCEEEEEE
Confidence 56777774 3666688888887665 899999998
No 455
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=24.19 E-value=53 Score=33.01 Aligned_cols=62 Identities=23% Similarity=0.386 Sum_probs=43.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHH-HCCCeeEEeeeccccc-----CCCCC----CCccccceEEEecCCc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLK-ACGLRVTCIKIDPYLN-----TDAGT----MSPFEHGEVFVLDDGG 65 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~-~~g~~v~~~k~dpyln-----~d~gt----msp~~hgevfv~~dg~ 65 (601)
+-++++|. +|.||=-+|.+|+..+. ..|++|..+-..-+++ .+.|. +.-+..-.|.++||=+
T Consensus 153 ~~lll~G~--~GtGKT~La~aia~~~~~~~g~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~lLiiDdig 224 (308)
T 2qgz_A 153 KGLYLYGD--MGIGKSYLLAAMAHELSEKKGVSTTLLHFPSFAIDVKNAISNGSVKEEIDAVKNVPVLILDDIG 224 (308)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHHHHHHHSCCCEEEEEHHHHHHHHHCCCC----CCTTHHHHTSSEEEEETCC
T ss_pred ceEEEECC--CCCCHHHHHHHHHHHHHHhcCCcEEEEEHHHHHHHHHHHhccchHHHHHHHhcCCCEEEEcCCC
Confidence 35788997 79999999999999999 9999998776654433 22332 2333445688888743
No 456
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=24.13 E-value=55 Score=30.68 Aligned_cols=26 Identities=38% Similarity=0.451 Sum_probs=17.2
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHC-CCee
Q 007496 3 YVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRV 34 (601)
Q Consensus 3 ~i~vtggv~s~~gkg~~~~s~g~ll~~~-g~~v 34 (601)
.|.+||| +|=||-.+ ++.|+.+ |+.|
T Consensus 14 iIgltG~--~GSGKSTv----a~~L~~~lg~~v 40 (192)
T 2grj_A 14 VIGVTGK--IGTGKSTV----CEILKNKYGAHV 40 (192)
T ss_dssp EEEEECS--TTSSHHHH----HHHHHHHHCCEE
T ss_pred EEEEECC--CCCCHHHH----HHHHHHhcCCEE
Confidence 5889999 56678554 5555555 7544
No 457
>2vfb_A Arylamine N-acetyltransferase; NAT, acetyl COA, mycobacteria, actyltransferase; 2.00A {Mycobacterium marinum} PDB: 2vfc_A* 3ltw_A*
Probab=24.06 E-value=87 Score=31.39 Aligned_cols=52 Identities=23% Similarity=0.231 Sum_probs=39.5
Q ss_pred HHHHHHHHCCCeeEEeeecccccCCCCCC-CccccceEEEecCCcc----ccCCCCc
Q 007496 22 SIGVLLKACGLRVTCIKIDPYLNTDAGTM-SPFEHGEVFVLDDGGE----VDLDLGN 73 (601)
Q Consensus 22 s~g~ll~~~g~~v~~~k~dpyln~d~gtm-sp~~hgevfv~~dg~e----~dldlg~ 73 (601)
-.+.+|++.||+|+.+.---|.+-+++.- .|..|==..|+-||.. +|.=+|.
T Consensus 76 Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~~~~H~~l~V~idg~~~~ylvDVGFG~ 132 (280)
T 2vfb_A 76 LIGYVLAELGYRVRRLAGRVVWLAPPDAPTPAQTHTVLAVTFPGCQGPYLVDVGFGG 132 (280)
T ss_dssp HHHHHHHHHTCEEEEEEEEECTTCCTTSCCCCSCEEEEEEECTTCSSCEEECSCSGG
T ss_pred HHHHHHHHCCCeEEEEEEEEEeCCCCCCCCCCCCcEEEEEEECCeEEEEEEecCCCc
Confidence 46789999999999987555655555433 5899999999999864 4666665
No 458
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A
Probab=23.94 E-value=74 Score=32.68 Aligned_cols=35 Identities=31% Similarity=0.308 Sum_probs=28.9
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007496 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (601)
Q Consensus 3 ~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (601)
.++|+| -||-||-.++..+-..+...|.+|.. +||
T Consensus 37 ~~~i~G--~~G~GKs~~~~~~~~~~~~~~~~~~~--~D~ 71 (392)
T 4ag6_A 37 NWTILA--KPGAGKSFTAKMLLLREYMQGSRVII--IDP 71 (392)
T ss_dssp CEEEEC--CTTSSHHHHHHHHHHHHHTTTCCEEE--EES
T ss_pred ceEEEc--CCCCCHHHHHHHHHHHHHHCCCEEEE--EeC
Confidence 467777 58999999999998888889988877 476
No 459
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=23.90 E-value=70 Score=29.51 Aligned_cols=34 Identities=15% Similarity=0.273 Sum_probs=23.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHH-HCCCeeEEeeec
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLK-ACGLRVTCIKID 40 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~-~~g~~v~~~k~d 40 (601)
||-|+||||- ++||+.++ +.|. ..|++|..+-.+
T Consensus 5 mk~vlVtGas-g~iG~~~~-----~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 5 YXYITILGAA-GQIAQXLT-----ATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CSEEEEESTT-SHHHHHHH-----HHHHHHCCCEEEEEESS
T ss_pred EEEEEEEeCC-cHHHHHHH-----HHHHhcCCceEEEEecC
Confidence 5779999974 55665443 4444 899999887554
No 460
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=23.88 E-value=1.6e+02 Score=29.25 Aligned_cols=68 Identities=16% Similarity=0.098 Sum_probs=33.0
Q ss_pred ceEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecC-CCccccccc-CCchhhhHHHHhcc--CCCEEEECCC
Q 007496 297 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPA-CDLEDATEK-ENPDAYKAAWKLLK--GADGILVPGG 371 (601)
Q Consensus 297 ~v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s-~~le~~~~~-~~p~~y~~a~~~L~--~~DGIlvpGG 371 (601)
++|||||| .+... -..+.++|.+.++++ .-.+-.. +..+.-... ..+..|....+.|. ++|.|+|+--
T Consensus 4 ~~rvgiiG-~G~~~--~~~~~~~l~~~~~~l----vav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp 75 (336)
T 2p2s_A 4 KIRFAAIG-LAHNH--IYDMCQQLIDAGAEL----AGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVI 75 (336)
T ss_dssp CCEEEEEC-CSSTH--HHHHHHHHHHTTCEE----EEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSC
T ss_pred ccEEEEEC-CChHH--HHHhhhhhcCCCcEE----EEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCC
Confidence 58999999 55332 124567776555442 2223222 211100000 01123444445554 6899999863
No 461
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=23.80 E-value=58 Score=31.29 Aligned_cols=31 Identities=32% Similarity=0.356 Sum_probs=23.4
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~-s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|-++||||-- +|||+.++ +.|..+|++|...
T Consensus 9 k~vlVTGas~~~gIG~~ia-----~~l~~~G~~V~~~ 40 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIA-----AKLKEAGAEVALS 40 (261)
T ss_dssp CEEEEESCCSSSSHHHHHH-----HHHHHHTCEEEEE
T ss_pred CEEEEECCCCCCcHHHHHH-----HHHHHCCCEEEEE
Confidence 6799999964 79998654 4566679988765
No 462
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=23.71 E-value=2.9e+02 Score=25.92 Aligned_cols=33 Identities=24% Similarity=0.295 Sum_probs=21.0
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGI 397 (601)
.++|||++.+.. .... ...++.+.+.++|+.-+
T Consensus 56 ~~vdgiIi~~~~-~~~~---~~~~~~~~~~~iPvV~i 88 (271)
T 2dri_A 56 RGTKILLINPTD-SDAV---GNAVKMANQANIPVITL 88 (271)
T ss_dssp TTEEEEEECCSS-TTTT---HHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEeCCC-hHHH---HHHHHHHHHCCCcEEEe
Confidence 479999997632 1111 23466677788998654
No 463
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=23.67 E-value=47 Score=34.04 Aligned_cols=32 Identities=22% Similarity=0.360 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~ 39 (601)
|.++||||- +|||+.+ .+.|-.+|.+|...=.
T Consensus 46 k~vlVTGas-~GIG~ai-----a~~La~~Ga~Vvl~~r 77 (346)
T 3kvo_A 46 CTVFITGAS-RGIGKAI-----ALKAAKDGANIVIAAK 77 (346)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHTTTCEEEEEES
T ss_pred CEEEEeCCC-hHHHHHH-----HHHHHHCCCEEEEEEC
Confidence 789999996 7888754 4567778998876543
No 464
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=23.58 E-value=50 Score=29.60 Aligned_cols=46 Identities=20% Similarity=0.150 Sum_probs=28.7
Q ss_pred CCCcEEEEeeCccccccC-------cchHHHHHHHHhhHcCCCCEEEEeeeeeee
Q 007496 138 GPVDVCVIELGGTIGDIE-------SMPFIEALGQFSYRVGPGNFCLIHVSLVPV 185 (601)
Q Consensus 138 ~~~dv~i~e~ggtvgdie-------s~pf~ea~rq~~~~~g~~n~~~ih~~~vp~ 185 (601)
..||+|+|.+|. .|+- -.-|.+.++++-..+...+.-.|-++..|.
T Consensus 73 ~~pd~vvi~~G~--ND~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~vil~~~~p~ 125 (204)
T 3p94_A 73 LKPKAVVILAGI--NDIAHNNGVIALENVFGNLVSMAELAKANHIKVIFCSVLPA 125 (204)
T ss_dssp GCEEEEEEECCH--HHHTTTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCC
T ss_pred CCCCEEEEEeec--CccccccCCCCHHHHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 469999999985 3442 234666677666555444555555565554
No 465
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Probab=23.58 E-value=40 Score=34.00 Aligned_cols=30 Identities=30% Similarity=0.338 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.|+||||- ||||+.++ +.|-.+|.+|..+
T Consensus 3 k~vlVTGas-~GIG~ala-----~~L~~~G~~v~~v 32 (327)
T 1jtv_A 3 TVVLITGCS-SGIGLHLA-----VRLASDPSQSFKV 32 (327)
T ss_dssp EEEEESCCS-SHHHHHHH-----HHHHTCTTCCEEE
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCceEEE
Confidence 789999985 78887654 5677788877554
No 466
>1yrb_A ATP(GTP)binding protein; GTPase, P-loop, rossman fold, GDP, HYDR; HET: GDP; 1.75A {Pyrococcus abyssi} SCOP: c.37.1.10 PDB: 1yr6_A* 1yr8_A* 1yr9_A* 1yra_A* 1yr7_A* 2oxr_A*
Probab=23.55 E-value=96 Score=29.34 Aligned_cols=38 Identities=24% Similarity=0.443 Sum_probs=32.2
Q ss_pred EEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 007496 4 VLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (601)
Q Consensus 4 i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln 44 (601)
++++| -.|.||=.++..++..|. .|++|..+-.||-.+
T Consensus 17 ~~~~G--kgGvGKTTl~~~La~~l~-~g~~v~vvd~D~~~~ 54 (262)
T 1yrb_A 17 VVFVG--TAGSGKTTLTGEFGRYLE-DNYKVAYVNLDTGVK 54 (262)
T ss_dssp EEEEC--STTSSHHHHHHHHHHHHT-TTSCEEEEECCSSCS
T ss_pred EEEeC--CCCCCHHHHHHHHHHHHH-CCCeEEEEeCCCCcc
Confidence 44444 478999999999999999 999999999999654
No 467
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=23.49 E-value=2.5e+02 Score=27.54 Aligned_cols=31 Identities=19% Similarity=0.349 Sum_probs=20.7
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGI 397 (601)
.++||||+.+..... ..++.+.+.++|+.-+
T Consensus 117 ~~vdGiIi~~~~~~~------~~~~~l~~~~iPvV~~ 147 (339)
T 3h5o_A 117 HRPDGVLITGLSHAE------PFERILSQHALPVVYM 147 (339)
T ss_dssp TCCSEEEEECSCCCT------THHHHHHHTTCCEEEE
T ss_pred CCCCEEEEeCCCCCH------HHHHHHhcCCCCEEEE
Confidence 589999998743222 2345566778998755
No 468
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=23.43 E-value=3.5e+02 Score=26.43 Aligned_cols=91 Identities=14% Similarity=0.059 Sum_probs=46.7
Q ss_pred CCceEEEEEcccCCCcchH-HHHH----HHHHHccc-cceeEEEEEeecCCCcccccccCCchhhhHHHHhc---cCCCE
Q 007496 295 HEPVRIAMVGKYTGLSDAY-LSIL----KALLHASV-DLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL---KGADG 365 (601)
Q Consensus 295 ~~~v~IalVGkY~~l~DaY-~SIi----~aL~~ag~-~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L---~~~DG 365 (601)
.++++||++.........+ ..+. .+++..+- -.+.++++.+.++. .+|+.-..+.+.| .++|+
T Consensus 14 ~~~i~IG~~~p~sg~~~~~~~~~~~g~~~a~~~~ng~~~g~~~~l~~~d~~--------~~~~~~~~~~~~l~~~~~v~~ 85 (375)
T 4evq_A 14 AGALKVGLLLPYSGTYAPLGEAITRGLELYVQSQGGKLGGRSISFVKVDDE--------SAPPKATELTTKLIQSEKADV 85 (375)
T ss_dssp -CCEEEEEEECSSSTTHHHHHHHHHHHHHHHHHTTTEETTEEEEEEEEECT--------TCHHHHHHHHHCCCCCSCCSE
T ss_pred CCCeEEEEEeCCCCcchhcCHHHHHHHHHHHHHhCCCcCCEEEEEEEecCC--------CCHHHHHHHHHHHHhcCCceE
Confidence 3579999996443221122 2344 34444430 11334556666554 1333322333334 37999
Q ss_pred EEECCCCCCCchhHHHHHHHHHHHcCCCEEEEe
Q 007496 366 ILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (601)
Q Consensus 366 IlvpGGfG~rg~eg~i~aik~are~~iP~LGIC 398 (601)
||.|.+. .....+...+.+.++|++..+
T Consensus 86 iig~~~s-----~~~~~~~~~~~~~~iP~v~~~ 113 (375)
T 4evq_A 86 LIGTVHS-----GVAMAMVKIAREDGIPTIVPN 113 (375)
T ss_dssp EEECSSH-----HHHHHHHHHHHHHCCCEEESS
T ss_pred EEcCCcc-----HHHHHHHHHHHHcCceEEecC
Confidence 9976531 122344566677899998765
No 469
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=23.42 E-value=66 Score=30.93 Aligned_cols=34 Identities=18% Similarity=0.089 Sum_probs=23.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHC-CCeeEEeeecc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRVTCIKIDP 41 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~-g~~v~~~k~dp 41 (601)
|| |+||||- ..||+-+ -..|..+ |++|..+--+|
T Consensus 1 M~-ilVtGat-G~iG~~l-----~~~L~~~~g~~V~~~~R~~ 35 (289)
T 3e48_A 1 MN-IMLTGAT-GHLGTHI-----TNQAIANHIDHFHIGVRNV 35 (289)
T ss_dssp CC-EEEETTT-SHHHHHH-----HHHHHHTTCTTEEEEESSG
T ss_pred CE-EEEEcCC-chHHHHH-----HHHHhhCCCCcEEEEECCH
Confidence 55 8999975 4455544 4446666 99999876654
No 470
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=23.26 E-value=4.1e+02 Score=25.90 Aligned_cols=92 Identities=12% Similarity=0.123 Sum_probs=49.7
Q ss_pred CCceEEEEEcccCCCcchH-HHHHHHHHHccccc-eeEEEEEeecCCCcccccccCCchhhhHHHHhc---cCCCEEEEC
Q 007496 295 HEPVRIAMVGKYTGLSDAY-LSILKALLHASVDL-RKKLVIDWIPACDLEDATEKENPDAYKAAWKLL---KGADGILVP 369 (601)
Q Consensus 295 ~~~v~IalVGkY~~l~DaY-~SIi~aL~~ag~~~-~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L---~~~DGIlvp 369 (601)
.++++||++...+.....+ ..+.++++.+--++ +.++++.+.++. .+|+...++.+.| .++|+||.|
T Consensus 25 ~~~i~IG~~~p~sg~~~~~g~~~~~g~~~a~~~i~G~~i~l~~~d~~--------~~~~~~~~~~~~l~~~~~v~~iig~ 96 (386)
T 3sg0_A 25 QAEIKIGITMSASGPGAALGQPQSKTVAALPKEIGGEKVTYFALDDE--------SDPTKAAQNARKLLSEEKVDVLIGS 96 (386)
T ss_dssp CCCEEEEEEECCSSTTHHHHHHHHHHGGGSCSEETTEEEEEEEEECT--------TCHHHHHHHHHHHHHTSCCSEEECC
T ss_pred CCceEEEEEeccCCchhhhcHHHHHHHHHHHHHcCCEEEEEEEecCC--------CCHHHHHHHHHHHHhhcCceEEECC
Confidence 4679999996443221122 24556665554332 344566665543 2333322233333 369999844
Q ss_pred CCCCCCchhHHHHHHHHHHHcCCCEEEEeh
Q 007496 370 GGFGNRGVQGKILAAKYAREHRIPYLGICL 399 (601)
Q Consensus 370 GGfG~rg~eg~i~aik~are~~iP~LGICL 399 (601)
.+ ......++..+.+.++|++..+.
T Consensus 97 ~~-----s~~~~~~~~~~~~~~ip~v~~~~ 121 (386)
T 3sg0_A 97 SL-----TPVSLPLIDIAAEAKTPLMTMAA 121 (386)
T ss_dssp SS-----HHHHHHHHHHHHHTTCCEEECCC
T ss_pred CC-----chhHHHHHHHHHhcCCeEEEecC
Confidence 31 12233455667788999998764
No 471
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=23.22 E-value=62 Score=30.96 Aligned_cols=31 Identities=19% Similarity=0.338 Sum_probs=23.2
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~-s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.++||||-= ||||+.+ .+.|..+|++|...
T Consensus 8 k~vlVTGasg~~GIG~~i-----a~~l~~~G~~V~~~ 39 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGI-----ARSLHEAGARLIFT 39 (266)
T ss_dssp CEEEEECCCSTTSHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEEcCCCCCcHHHHH-----HHHHHHCCCEEEEe
Confidence 6899999864 7888754 45667789887654
No 472
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=23.11 E-value=2.3e+02 Score=28.25 Aligned_cols=78 Identities=15% Similarity=0.201 Sum_probs=48.6
Q ss_pred ceEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhccCCCEEEECCCCCCCc
Q 007496 297 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 376 (601)
Q Consensus 297 ~v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIlvpGGfG~rg 376 (601)
.-+|.+|| .-..+-..|.++-.+.|+.. +.=.|+.-. |..... ..+..+|.|||.. +.
T Consensus 70 ~~~vlfVg---Tk~~~q~~V~k~A~~~g~~~---v~~rwlgGt-LTN~~t-----------~~f~~PdllvV~D----p~ 127 (252)
T 3u5c_A 70 PEDVVAIS---SRTFGQRAVLKFAAHTGATP---IAGRFTPGS-FTNYIT-----------RSFKEPRLVIVTD----PR 127 (252)
T ss_dssp GGGEEEEE---CSHHHHHHHHHHHHHSSCEE---EESCCCTTS-SSCTTS-----------TTCCCCSEEEESC----TT
T ss_pred CCEEEEEe---CCcHHHHHHHHHHHHhCCce---ecCcccCCc-ccChhh-----------hhccCCceEEEeC----Cc
Confidence 34688887 12224446667766777653 234676532 322111 2357899999986 22
Q ss_pred hhHHHHHHHHHHHcCCCEEEEe
Q 007496 377 VQGKILAAKYAREHRIPYLGIC 398 (601)
Q Consensus 377 ~eg~i~aik~are~~iP~LGIC 398 (601)
. ...+++.|...+||+.|+|
T Consensus 128 ~--d~~ai~EA~~l~IP~Ial~ 147 (252)
T 3u5c_A 128 S--DAQAIKEASYVNIPVIALT 147 (252)
T ss_dssp T--THHHHHHHHTTTCCEEEEE
T ss_pred c--chHHHHHHHHcCCCEEEEE
Confidence 2 2468889999999999998
No 473
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=23.10 E-value=1.1e+02 Score=29.67 Aligned_cols=45 Identities=24% Similarity=0.273 Sum_probs=30.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc---cccCCCCCCCc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP---YLNTDAGTMSP 52 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp---yln~d~gtmsp 52 (601)
|+.|+|+|. +|-||-..|..|..-| |+. .+-.|- |-+.|-||..|
T Consensus 1 M~li~I~G~--~GSGKSTla~~La~~~---~~~--~i~~D~~~~~~~~~~~t~~~ 48 (253)
T 2ze6_A 1 MLLHLIYGP--TCSGKTDMAIQIAQET---GWP--VVALDRVQCCPQIATGSGRP 48 (253)
T ss_dssp CEEEEEECC--TTSSHHHHHHHHHHHH---CCC--EEECCSGGGCGGGTTTTTCC
T ss_pred CeEEEEECC--CCcCHHHHHHHHHhcC---CCe--EEeccHHhccCCCccccCCC
Confidence 788999995 8999988888776644 443 333443 44556677666
No 474
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=22.93 E-value=80 Score=31.07 Aligned_cols=34 Identities=38% Similarity=0.427 Sum_probs=25.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (601)
|-|+||||- |-+.+.|...|.++|++|...-.||
T Consensus 10 ~~vlVTGat------GfIG~~l~~~Ll~~G~~V~~~~r~~ 43 (338)
T 2rh8_A 10 KTACVVGGT------GFVASLLVKLLLQKGYAVNTTVRDP 43 (338)
T ss_dssp CEEEEECTT------SHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CEEEEECCc------hHHHHHHHHHHHHCCCEEEEEEcCc
Confidence 569999973 5666777777888999998754443
No 475
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=22.84 E-value=3.9e+02 Score=25.70 Aligned_cols=92 Identities=16% Similarity=0.184 Sum_probs=48.0
Q ss_pred CCceEEEEEcccCCCcchH-HHHHHHHHHccccc-eeEEEEEeecCCCcccccccCCchhhhHHHHhc--c-CCCEEEEC
Q 007496 295 HEPVRIAMVGKYTGLSDAY-LSILKALLHASVDL-RKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--K-GADGILVP 369 (601)
Q Consensus 295 ~~~v~IalVGkY~~l~DaY-~SIi~aL~~ag~~~-~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~-~~DGIlvp 369 (601)
.++++||++...+.....+ ..+.++++.+--++ +.++++.+.++. .+|+.-.++.+.| . ++|+||.|
T Consensus 5 ~~~i~IG~~~p~sg~~~~~g~~~~~g~~~a~~~i~g~~i~l~~~d~~--------~~~~~~~~~~~~l~~~~~v~~iig~ 76 (362)
T 3snr_A 5 TNEITVGISVTTTGPAAALGIPERNALEFVVKEISGHPIKIIVLDDG--------GDPTAATTNARRFVTESKADVIMGS 76 (362)
T ss_dssp CCCEEEEEEECCSSTTHHHHHHHHHGGGGSCSEETTEEEEEEEEECT--------TCHHHHHHHHHHHHHTSCCSEEEEC
T ss_pred CCCeEEEEEecccCchhhcCHHHHHHHHHHHHHhCCeEEEEEEecCC--------CCHHHHHHHHHHHHhccCceEEEcC
Confidence 3579999996443211122 23455555543332 244556665543 1233222222333 3 79999965
Q ss_pred CCCCCCchhHHHHHHHHHHHcCCCEEEEeh
Q 007496 370 GGFGNRGVQGKILAAKYAREHRIPYLGICL 399 (601)
Q Consensus 370 GGfG~rg~eg~i~aik~are~~iP~LGICL 399 (601)
.+ ......+...+.+.++|++..+.
T Consensus 77 ~~-----s~~~~~~~~~~~~~~ip~v~~~~ 101 (362)
T 3snr_A 77 SV-----TPPSVAISNVANEAQIPHIALAP 101 (362)
T ss_dssp SS-----HHHHHHHHHHHHHHTCCEEESSC
T ss_pred CC-----cHHHHHHHHHHHHcCccEEEecC
Confidence 42 11223345666778999988653
No 476
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=22.76 E-value=53 Score=31.43 Aligned_cols=79 Identities=13% Similarity=0.114 Sum_probs=38.6
Q ss_pred CceEEEEEcccCCCcchH-HHHHHHHHHccccceeE-EEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEECCC
Q 007496 296 EPVRIAMVGKYTGLSDAY-LSILKALLHASVDLRKK-LVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGG 371 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY-~SIi~aL~~ag~~~~vk-v~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvpGG 371 (601)
+..+||++=. ...+.| ..+.+.++.+..+.+.. +.+.....+ ++.-.+..+.+ .++|||++.+
T Consensus 9 ~~~~Igvi~~--~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~----------~~~~~~~~~~l~~~~vdgiIi~~- 75 (277)
T 3hs3_A 9 KSKMIGIIIP--DLNNRFYAQIIDGIQEVIQKEGYTALISFSTNSD----------VKKYQNAIINFENNNVDGIITSA- 75 (277)
T ss_dssp CCCEEEEEES--CTTSHHHHHHHHHHHHHHHHTTCEEEEEECSSCC----------HHHHHHHHHHHHHTTCSEEEEEC-
T ss_pred CCCEEEEEeC--CCCChhHHHHHHHHHHHHHHCCCCEEEEEeCCCC----------hHHHHHHHHHHHhCCCCEEEEcc-
Confidence 4568998832 233344 35555555554444444 333322211 11111122233 5899999987
Q ss_pred CCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 372 FGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 372 fG~rg~eg~i~aik~are~~iP~LGI 397 (601)
+ .++.+.+.++|+.-+
T Consensus 76 ---~-------~~~~~~~~~iPvV~~ 91 (277)
T 3hs3_A 76 ---F-------TIPPNFHLNTPLVMY 91 (277)
T ss_dssp ---C-------CCCTTCCCSSCEEEE
T ss_pred ---h-------HHHHHHhCCCCEEEE
Confidence 1 122334567887544
No 477
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=22.54 E-value=73 Score=31.42 Aligned_cols=34 Identities=32% Similarity=0.344 Sum_probs=24.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (601)
|-|+||||- |-+.+.+-..|.++|++|...-.||
T Consensus 6 ~~vlVTGat------GfIG~~l~~~L~~~G~~V~~~~r~~ 39 (337)
T 2c29_D 6 ETVCVTGAS------GFIGSWLVMRLLERGYTVRATVRDP 39 (337)
T ss_dssp CEEEETTTT------SHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CEEEEECCc------hHHHHHHHHHHHHCCCEEEEEECCc
Confidence 679999974 5555667777778999998654443
No 478
>2wtz_A UDP-N-acetylmuramoyl-L-alanyl-D-glutamate- -2,6-diaminopimelate ligase; nucleotide-binding, peptidoglycan synthesis, MURE, C shape; HET: KCX UAG; 3.00A {Mycobacterium tuberculosis} PDB: 2xja_A*
Probab=22.49 E-value=82 Score=34.27 Aligned_cols=33 Identities=27% Similarity=0.253 Sum_probs=29.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k 38 (601)
|.|-||| +=||+.|++=|..+|++.|++|-.+.
T Consensus 147 ~vI~VTG----TnGKTTT~~ml~~iL~~~G~~~g~~g 179 (535)
T 2wtz_A 147 TVIGITG----TSGKTTTTYLVEAGLRAAGRVAGLIG 179 (535)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCEEEES
T ss_pred eEEEeeC----CCChHHHHHHHHHHHHHCCCCEEEEC
Confidence 6788888 56999999999999999999987653
No 479
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=22.48 E-value=84 Score=30.82 Aligned_cols=33 Identities=18% Similarity=0.239 Sum_probs=24.0
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007496 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (601)
Q Consensus 3 ~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (601)
-|+||||- |-+.+.+-..|..+|++|..+-.+|
T Consensus 15 ~ilVtGat------G~iG~~l~~~L~~~g~~V~~~~r~~ 47 (342)
T 2x4g_A 15 KYAVLGAT------GLLGHHAARAIRAAGHDLVLIHRPS 47 (342)
T ss_dssp EEEEESTT------SHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred EEEEECCC------cHHHHHHHHHHHHCCCEEEEEecCh
Confidence 38999973 5555666677778899998875543
No 480
>1w5r_A Arylamine N-acetyltransferase; acyltransferase; 1.45A {Mycobacterium smegmatis} SCOP: d.3.1.5 PDB: 1w6f_A* 1gx3_A
Probab=22.43 E-value=91 Score=31.21 Aligned_cols=52 Identities=19% Similarity=0.261 Sum_probs=39.0
Q ss_pred HHHHHHHHCCCeeEEeeecccccCCCCCC-CccccceEEEecCCcc----ccCCCCc
Q 007496 22 SIGVLLKACGLRVTCIKIDPYLNTDAGTM-SPFEHGEVFVLDDGGE----VDLDLGN 73 (601)
Q Consensus 22 s~g~ll~~~g~~v~~~k~dpyln~d~gtm-sp~~hgevfv~~dg~e----~dldlg~ 73 (601)
-.+.+|++.||+|+.+.-=-|.+-+++.- .|..|==..|+-||.. +|.=+|.
T Consensus 79 Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~~~~H~~l~V~idg~~~~ylvDVGFG~ 135 (278)
T 1w5r_A 79 LLGYVLEELGFEVERLSGRVVWMRADDAPLPAQTHNVLSVAVPGADGRYLVDVGFGG 135 (278)
T ss_dssp HHHHHHHHHTCEEEEEEEEECTTCCTTCCCCCEEEEEEEEECSSCSCCEEECSCSCT
T ss_pred HHHHHHHHcCCeEEEEEEEEeeCCCCCCCCCCCccEEEEEEECCeEEEEEEecCCCc
Confidence 46789999999999987555655554432 5899999999998854 4666664
No 481
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=22.29 E-value=63 Score=28.93 Aligned_cols=25 Identities=24% Similarity=0.360 Sum_probs=19.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHH
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLL 27 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll 27 (601)
++.|+++|. ||-||..+|.-+...|
T Consensus 5 ~~~i~l~G~--~GsGKst~a~~La~~l 29 (185)
T 3trf_A 5 LTNIYLIGL--MGAGKTSVGSQLAKLT 29 (185)
T ss_dssp CCEEEEECS--TTSSHHHHHHHHHHHH
T ss_pred CCEEEEECC--CCCCHHHHHHHHHHHh
Confidence 357899997 9999988887777655
No 482
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=22.27 E-value=70 Score=32.71 Aligned_cols=68 Identities=16% Similarity=0.089 Sum_probs=33.3
Q ss_pred ceEEEEEcccCCCcchHHHHHHHHHHccccceeEEEEEeecCCC-ccccccc-CCchhhhHHHHhcc--CCCEEEECCC
Q 007496 297 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACD-LEDATEK-ENPDAYKAAWKLLK--GADGILVPGG 371 (601)
Q Consensus 297 ~v~IalVGkY~~l~DaY~SIi~aL~~ag~~~~vkv~i~wi~s~~-le~~~~~-~~p~~y~~a~~~L~--~~DGIlvpGG 371 (601)
++|||||| .+.. .-..+..+|.+.++++. -.+-...+ .+.-... ..+..|....+.|. ++|.|+|+--
T Consensus 26 ~irvgiiG-~G~~--~~~~~~~~~~~~~~~lv----av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp 97 (361)
T 3u3x_A 26 ELRFAAVG-LNHN--HIYGQVNCLLRAGARLA----GFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAV 97 (361)
T ss_dssp CCEEEEEC-CCST--THHHHHHHHHHTTCEEE----EEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCC
T ss_pred CcEEEEEC-cCHH--HHHHHHHHhhcCCcEEE----EEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 58999999 6543 22345666666555432 22211111 1000000 01223444455564 5899999874
No 483
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=22.24 E-value=81 Score=30.69 Aligned_cols=35 Identities=17% Similarity=0.145 Sum_probs=25.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dp 41 (601)
+|-|+||||- |-+.+.+...|.++|++|..+-.+|
T Consensus 12 ~~~vlVTGat------G~iG~~l~~~L~~~G~~V~~~~r~~ 46 (321)
T 2pk3_A 12 SMRALITGVA------GFVGKYLANHLTEQNVEVFGTSRNN 46 (321)
T ss_dssp -CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred cceEEEECCC------ChHHHHHHHHHHHCCCEEEEEecCC
Confidence 4679999984 4555666677778899998875543
No 484
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=22.01 E-value=68 Score=29.39 Aligned_cols=27 Identities=37% Similarity=0.444 Sum_probs=18.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCe
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLR 33 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~ 33 (601)
|+.|.+||+ +|-||..++ ++|...|+.
T Consensus 2 ~~~i~l~G~--~GsGKST~~----~~La~lg~~ 28 (206)
T 1jjv_A 2 TYIVGLTGG--IGSGKTTIA----NLFTDLGVP 28 (206)
T ss_dssp CEEEEEECS--TTSCHHHHH----HHHHTTTCC
T ss_pred CcEEEEECC--CCCCHHHHH----HHHHHCCCc
Confidence 367899998 788996555 555445653
No 485
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=21.95 E-value=58 Score=31.14 Aligned_cols=31 Identities=29% Similarity=0.290 Sum_probs=23.2
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 2 k~i~vtggv~-s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|.++||||-= +|||+. +.+.|-.+|.+|..+
T Consensus 21 k~vlITGas~~~giG~~-----~a~~l~~~G~~v~~~ 52 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGIE-----AARGCAEMGAAVAIT 52 (267)
T ss_dssp CEEEETTCCSSSSHHHH-----HHHHHHHTSCEEEEC
T ss_pred CEEEEECCCCCCChHHH-----HHHHHHHCCCeEEEE
Confidence 7899999954 788874 456677789887654
No 486
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=21.87 E-value=62 Score=31.32 Aligned_cols=45 Identities=20% Similarity=0.220 Sum_probs=29.7
Q ss_pred ccCCCEEEECCCCCCC-chh-HHHHHHHHHHHcCCCEEEEehhHHHHH
Q 007496 360 LKGADGILVPGGFGNR-GVQ-GKILAAKYAREHRIPYLGICLGMQVAV 405 (601)
Q Consensus 360 L~~~DGIlvpGGfG~r-g~e-g~i~aik~are~~iP~LGICLGmQlla 405 (601)
+.+.|+|.++-|||.- |.. |+.-+=-.|...++|++||+- ++.++
T Consensus 64 ~~dld~Iav~~GPGsfTGlRiG~~~Ak~La~~~~iPl~gVs~-l~a~a 110 (218)
T 2a6a_A 64 VKDLDVVGVGIGPGGLTGLRVGIATVVGLVSPYDIPVAPLNS-FEMTA 110 (218)
T ss_dssp GGGCSEEEEECCSSCHHHHHHHHHHHHHHHGGGTCCEEEECH-HHHHH
T ss_pred HHHCCEEEEEcCCCchHhHHHHHHHHHHHHHHcCCCEEEeCc-HHHHH
Confidence 3567999999999984 332 322222234567999999995 55544
No 487
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=21.63 E-value=68 Score=29.03 Aligned_cols=47 Identities=17% Similarity=0.212 Sum_probs=26.5
Q ss_pred CCCCcEEEEeeCccccccCcc--hHHHHHHHHhhHc---CCCCEEEEeeeeeeee
Q 007496 137 EGPVDVCVIELGGTIGDIESM--PFIEALGQFSYRV---GPGNFCLIHVSLVPVL 186 (601)
Q Consensus 137 ~~~~dv~i~e~ggtvgdies~--pf~ea~rq~~~~~---g~~n~~~ih~~~vp~~ 186 (601)
..+||+++|.+|.- |+-.. -|.+.+++|-.++ ++ +...|-++..|..
T Consensus 72 ~~~pd~Vvi~~G~N--D~~~~~~~~~~~l~~ii~~l~~~~p-~~~ii~~~~~P~~ 123 (200)
T 4h08_A 72 NTKFDVIHFNNGLH--GFDYTEEEYDKSFPKLIKIIRKYAP-KAKLIWANTTPVR 123 (200)
T ss_dssp HSCCSEEEECCCSS--CTTSCHHHHHHHHHHHHHHHHHHCT-TCEEEEECCCCCE
T ss_pred cCCCCeEEEEeeeC--CCCCCHHHHHHHHHHHHHHHhhhCC-CccEEEeccCCCc
Confidence 35799999999964 54322 2555566554332 32 2444445555544
No 488
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=21.56 E-value=1.3e+02 Score=30.17 Aligned_cols=59 Identities=22% Similarity=0.287 Sum_probs=39.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe--eecccccCC--CCC---CCccccceEEEecCC
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI--KIDPYLNTD--AGT---MSPFEHGEVFVLDDG 64 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~--k~dpyln~d--~gt---msp~~hgevfv~~dg 64 (601)
+.|-||| +=||=.|++=|+.+|+..|++++.+ .+-.-+|.. -|+ ..--+..+++|++=+
T Consensus 109 ~~IaVTG----TnGKTTTt~ll~~iL~~~g~~~~~~~g~~~~n~~~~~~~~~p~~~~~~~~~~~~V~E~s 174 (326)
T 3eag_A 109 WVLGVAG----THGKTTTASMLAWVLEYAGLAPGFLIGGVPENFGVSARLPQTPRQDPNSQSPFFVIEAD 174 (326)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCCEEECSSEETTSSCSEECCCCCSSCTTSCCCEEEEECC
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHHcCCCceEEecceeccCCcceecCCccccccCCCCCEEEEEcc
Confidence 5788898 4699999999999999999998642 122222221 121 111246789999844
No 489
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=21.38 E-value=1.1e+02 Score=29.65 Aligned_cols=41 Identities=27% Similarity=0.320 Sum_probs=26.7
Q ss_pred ccCCCEEEECCCCCCC-chhHHHHHHH-HHHHcCCCEEEEehh
Q 007496 360 LKGADGILVPGGFGNR-GVQGKILAAK-YAREHRIPYLGICLG 400 (601)
Q Consensus 360 L~~~DGIlvpGGfG~r-g~eg~i~aik-~are~~iP~LGICLG 400 (601)
+.+.|+|.++-|||.- |..--+.++| .+...++|+.||+--
T Consensus 53 ~~did~Iav~~GPGsftglRig~~~ak~la~~~~~Pl~~V~~l 95 (231)
T 2gel_A 53 LNEIDALAFGRGPGSFTGVRIGIGIAQGLALGANLPMIGVSTL 95 (231)
T ss_dssp GGGCSEEEEECCSSCHHHHHHHHHHHHHHHHTTTCCEEEECHH
T ss_pred HHHCCEEEEEcCCChhHhHHHHHHHHHHHHHHcCCCEEEeccH
Confidence 3567999999999884 2221122222 245578999999953
No 490
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=21.19 E-value=98 Score=25.04 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=23.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCC-CeeEEeeecc
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACG-LRVTCIKIDP 41 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g-~~v~~~k~dp 41 (601)
||-|+|+|+ .++|. ++...|..+| ++|...-.+|
T Consensus 5 ~~~v~I~G~--G~iG~-----~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQ-----MIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECC--SHHHH-----HHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECC--CHHHH-----HHHHHHHhCCCceEEEEeCCH
Confidence 356888886 55554 5566778889 8887765543
No 491
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=20.94 E-value=62 Score=31.83 Aligned_cols=39 Identities=26% Similarity=0.270 Sum_probs=26.2
Q ss_pred EEEEEeCCcc----------CCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 007496 2 KYVLVTGGVV----------SGLGKGVTASSIGVLLKACGLRVTCIKID 40 (601)
Q Consensus 2 k~i~vtggv~----------s~~gkg~~~~s~g~ll~~~g~~v~~~k~d 40 (601)
|-|+||||=- |--=-|-...+|...|..+|.+|+.+--.
T Consensus 4 k~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 4 MKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp CEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6689999942 11112334456778888999999988544
No 492
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=20.78 E-value=2.9e+02 Score=26.45 Aligned_cols=81 Identities=14% Similarity=0.177 Sum_probs=39.0
Q ss_pred ceEEEEEcccCCCcchH-H----HHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHHHHhc--cCCCEEEEC
Q 007496 297 PVRIAMVGKYTGLSDAY-L----SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVP 369 (601)
Q Consensus 297 ~v~IalVGkY~~l~DaY-~----SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a~~~L--~~~DGIlvp 369 (601)
+.+||++ ... .+.| . .+.+.|...|+ ....+.+...++.. ++++-....+.+ .++|||++.
T Consensus 2 ~~~Igvi-~~~--~~p~~~~i~~gi~~~l~~~gy-~g~~v~l~~~~~~~--------~~~~~~~~~~~l~~~~vDgII~~ 69 (295)
T 3lft_A 2 NAKIGVL-QFV--SHPSLDLIYKGIQDGLAEEGY-KDDQVKIDFMNSEG--------DQSKVATMSKQLVANGNDLVVGI 69 (295)
T ss_dssp CEEEEEE-ECS--CCHHHHHHHHHHHHHHHHTTC-CGGGEEEEEEECTT--------CHHHHHHHHHHHTTSSCSEEEEE
T ss_pred ceEEEEE-Ecc--CChhHHHHHHHHHHHHHHcCC-CCCceEEEEecCCC--------CHHHHHHHHHHHHhcCCCEEEEC
Confidence 3579998 443 2233 3 34456666777 11122333333321 222222223333 479999997
Q ss_pred CCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 007496 370 GGFGNRGVQGKILAAKYAREHRIPYLGI 397 (601)
Q Consensus 370 GGfG~rg~eg~i~aik~are~~iP~LGI 397 (601)
|. ... ..+.. ...++|+.-+
T Consensus 70 ~~---~~~----~~~~~-~~~~iPvV~~ 89 (295)
T 3lft_A 70 AT---PAA----QGLAS-ATKDLPVIMA 89 (295)
T ss_dssp SH---HHH----HHHHH-HCSSSCEEEE
T ss_pred Cc---HHH----HHHHH-cCCCCCEEEE
Confidence 62 111 11222 2468998765
No 493
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=20.63 E-value=55 Score=30.18 Aligned_cols=65 Identities=20% Similarity=0.134 Sum_probs=34.8
Q ss_pred HHHHHHHHccccceeEEEEEeecCCCcccccccCCchhhhHH-HHhc-cCCCEEEECCCCCCCchhHHHHHHHHHHHcCC
Q 007496 315 SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAA-WKLL-KGADGILVPGGFGNRGVQGKILAAKYAREHRI 392 (601)
Q Consensus 315 SIi~aL~~ag~~~~vkv~i~wi~s~~le~~~~~~~p~~y~~a-~~~L-~~~DGIlvpGGfG~rg~eg~i~aik~are~~i 392 (601)
.+.+.|+..|+++... .+. .++ +...++ .+.+ .++|-||.+||-|--..+-..++++.+.+..+
T Consensus 31 ~l~~~l~~~G~~v~~~-~iv---~Dd----------~~i~~al~~a~~~~~DlVittGG~s~g~~D~t~eal~~~~~~~l 96 (164)
T 3pzy_A 31 IITEWLAQQGFSSAQP-EVV---ADG----------SPVGEALRKAIDDDVDVILTSGGTGIAPTDSTPDQTVAVVDYLI 96 (164)
T ss_dssp HHHHHHHHTTCEECCC-EEE---CSS----------HHHHHHHHHHHHTTCSEEEEESCCSSSTTCCHHHHHHTTCSEEC
T ss_pred HHHHHHHHCCCEEEEE-EEe---CCH----------HHHHHHHHHHHhCCCCEEEECCCCCCCCCccHHHHHHHHhcccC
Confidence 4667788888875331 111 221 111112 2234 37999999998544333334456665555445
Q ss_pred C
Q 007496 393 P 393 (601)
Q Consensus 393 P 393 (601)
|
T Consensus 97 p 97 (164)
T 3pzy_A 97 P 97 (164)
T ss_dssp H
T ss_pred c
Confidence 4
No 494
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=20.52 E-value=93 Score=33.47 Aligned_cols=57 Identities=19% Similarity=0.303 Sum_probs=37.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEecCC
Q 007496 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDG 64 (601)
Q Consensus 2 k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg 64 (601)
+.|-||| +=||-.|++=|+.+|+..|++++.+ +-..+| ..|+..-....+++|++=|
T Consensus 123 ~~IaVTG----TnGKTTTt~ml~~iL~~~g~~~~~~-~gg~~~-~~g~~~~~~~~d~~VlE~~ 179 (494)
T 4hv4_A 123 HGIAVAG----THGKTTTTAMLSSIYAEAGLDPTFV-NGGLVK-AAGTHARLGSSRYLIAEAD 179 (494)
T ss_dssp EEEEEEC----SSSHHHHHHHHHHHHHHTTCCCEEE-EEEEET-TTTEEEECCSSSEEEEECC
T ss_pred CEEEEec----CCChHHHHHHHHHHHHhcCCCCEEE-ECCccc-ccccccccCCCcEEEEEcc
Confidence 4688888 5699999999999999999975432 111112 1232222234688998765
No 495
>2x8n_A CV0863; non-uniform sampling, multidimensional decomposition, abacus, fragment monte carlo, structural genomics; NMR {Chromobacterium violaceum atcc 12472}
Probab=20.37 E-value=1.8e+02 Score=25.27 Aligned_cols=58 Identities=16% Similarity=0.151 Sum_probs=47.4
Q ss_pred HHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEE-ecCCccccCCCCccccccCCCCCCCCccc
Q 007496 20 ASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFV-LDDGGEVDLDLGNYERFMDIKLTRDNNIT 89 (601)
Q Consensus 20 ~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv-~~dg~e~dldlg~yerf~~~~l~~~~n~t 89 (601)
|-.-|+.++..+.++..+.+|| +-.-++| +.||.+.-+-|-.|.||.+.+-..-.|+.
T Consensus 13 A~~~g~~~~~~~~~a~~V~~~~------------~~~~l~v~L~dGr~l~~Pl~~~p~L~~At~eqr~~~e 71 (111)
T 2x8n_A 13 ASSRMEMLQREYSTLRSVQYRS------------EEGVIVFILANDRELKFRPDDLQATYGATPEQLREIE 71 (111)
T ss_dssp HHHHHHHHHHHTCCEEEEEEET------------TTTEEEEEETTCCEEEECTTTSSTTTTCCTTTTTSCE
T ss_pred HHHHHHHhhccCCeeEEEEEEc------------cCCEEEEEECCCCEEEeeHHHHHHHhcCCHHHHccEE
Confidence 3345788889999999999976 3446777 89999999999999999999877666654
No 496
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=20.33 E-value=90 Score=30.68 Aligned_cols=30 Identities=43% Similarity=0.533 Sum_probs=20.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 007496 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (601)
Q Consensus 1 ~k~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~ 37 (601)
|| |+||||- |-+.+.+...|.++|++|..+
T Consensus 1 m~-vlVTGat------G~iG~~l~~~L~~~G~~V~~~ 30 (338)
T 1udb_A 1 MR-VLVTGGS------GYIGSHTCVQLLQNGHDVIIL 30 (338)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHHTTCEEEEE
T ss_pred CE-EEEECCC------CHHHHHHHHHHHHCCCEEEEE
Confidence 44 8999973 444555666677789988764
No 497
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=20.33 E-value=1e+02 Score=27.11 Aligned_cols=32 Identities=28% Similarity=0.354 Sum_probs=22.4
Q ss_pred CCCcEEEEeeCccccccC------cchHHHHHHHHhhHcC
Q 007496 138 GPVDVCVIELGGTIGDIE------SMPFIEALGQFSYRVG 171 (601)
Q Consensus 138 ~~~dv~i~e~ggtvgdie------s~pf~ea~rq~~~~~g 171 (601)
..||+++|.+|+ .|+- ..-|.+.++++-.++.
T Consensus 66 ~~pd~vvi~~G~--ND~~~~~~~~~~~~~~~l~~~i~~~~ 103 (195)
T 1yzf_A 66 EKPDEVVIFFGA--NDASLDRNITVATFRENLETMIHEIG 103 (195)
T ss_dssp GCCSEEEEECCT--TTTCTTSCCCHHHHHHHHHHHHHHHC
T ss_pred cCCCEEEEEeec--cccCccCCCCHHHHHHHHHHHHHHhc
Confidence 579999999996 6765 1235666777766664
No 498
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=20.28 E-value=1.4e+02 Score=28.23 Aligned_cols=54 Identities=24% Similarity=0.314 Sum_probs=0.0
Q ss_pred eEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcc-ccc-------cCcc------hHHHHHHHHhhHcCC
Q 007496 111 VQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGD-------IESM------PFIEALGQFSYRVGP 172 (601)
Q Consensus 111 vqviphit~~i~~~i~~~~~~~~d~~~~~~dv~i~e~ggt-vgd-------ies~------pf~ea~rq~~~~~g~ 172 (601)
..+||-=-++|++.|++.. ..++|++|+ .||| +|+ ++.+ -|-|++|+...+-|+
T Consensus 68 ~~iv~Dd~~~I~~al~~a~-------~~~~DlVIt-tGGts~g~~D~t~eal~~l~~~~l~G~~~~f~~v~~kpG~ 135 (185)
T 3rfq_A 68 VVAVEADEVDIRNALNTAV-------IGGVDLVVS-VGGTGVTPRDVTPESTREILDREILGIAEAIRASGLSAGI 135 (185)
T ss_dssp EEEECSCHHHHHHHHHHHH-------HTTCSEEEE-ESCCSSSTTCCHHHHHHTTCSEECHHHHHHHHHHHHHTTC
T ss_pred EEEeCCCHHHHHHHHHHHH-------hCCCCEEEE-CCCCCCCCcccHHHHHHHHhcccCccHHHHHHHHhcCCCC
No 499
>3eaf_A ABC transporter, substrate binding protein; PSI2, NYSGXRC, substrate binding P structural genomics, protein structure initiative; 2.00A {Aeropyrum pernix}
Probab=20.22 E-value=3.7e+02 Score=26.70 Aligned_cols=90 Identities=12% Similarity=0.080 Sum_probs=46.0
Q ss_pred CceEEEEEcccCCCcchH-----HHHHHHHHH---cc-cc-cee--EEEEEeecCCCcccccccCCchhhhHHHH-hc--
Q 007496 296 EPVRIAMVGKYTGLSDAY-----LSILKALLH---AS-VD-LRK--KLVIDWIPACDLEDATEKENPDAYKAAWK-LL-- 360 (601)
Q Consensus 296 ~~v~IalVGkY~~l~DaY-----~SIi~aL~~---ag-~~-~~v--kv~i~wi~s~~le~~~~~~~p~~y~~a~~-~L-- 360 (601)
++++||++...+.....+ ..+.-+++. .| +. .+. ++++.+.|+. .+|+.-.++.+ .+
T Consensus 3 ~~i~IG~~~p~sG~~a~~g~~~~~g~~~a~~~iN~~ggi~~~G~~~~l~l~~~D~~--------~~~~~a~~~~~~li~~ 74 (391)
T 3eaf_A 3 LTINVGLLVDETGPTSDVGKGYSLGAELAFKYFNEKGIYTKDGVRVNINYIKRDYA--------YNPTTAEEYYREFRDR 74 (391)
T ss_dssp EEEEEEEEECSSSTTHHHHHHHHHHHHHHHHHHHHHCEECTTCCEEEEEEEEEECT--------TCHHHHHHHHHHHHHT
T ss_pred ccEEEEEEEcCCCchhhhhHHHHHHHHHHHHHHHHcCCCccCCeEEEEEEEEeCCC--------CCHHHHHHHHHHHHhh
Confidence 468999997554321122 223333333 22 10 334 5666666654 13333222222 23
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEeh
Q 007496 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICL 399 (601)
Q Consensus 361 ~~~DGIlvpGGfG~rg~eg~i~aik~are~~iP~LGICL 399 (601)
.++|+||.+ +. .....++..+.+.++|++....
T Consensus 75 ~~V~~iiG~---~s---~~~~a~~~~~~~~~iP~i~~~~ 107 (391)
T 3eaf_A 75 YGVIAIIGW---GT---ADTEKLSDQVDTDKITYISASY 107 (391)
T ss_dssp TCCSEEEEC---CH---HHHHHHHHHHHHHTCEEEESCC
T ss_pred cCcEEEEEc---Cc---HHHHHHHHHHhhcCCeEEeccc
Confidence 479999852 22 2233455667778999997543
No 500
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=20.04 E-value=1.4e+02 Score=30.58 Aligned_cols=38 Identities=26% Similarity=0.413 Sum_probs=32.7
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 007496 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (601)
Q Consensus 3 ~i~vtggv~s~~gkg~~~~s~g~ll~~~g~~v~~~k~dpy 42 (601)
.|.+.|- ||-||=.++..|+.+++..|.+|...-.|.|
T Consensus 131 vi~lvG~--nGaGKTTll~~Lag~l~~~~g~V~l~g~D~~ 168 (328)
T 3e70_C 131 VIMFVGF--NGSGKTTTIAKLANWLKNHGFSVVIAASDTF 168 (328)
T ss_dssp EEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred EEEEECC--CCCCHHHHHHHHHHHHHhcCCEEEEEeeccc
Confidence 5667775 9999999999999999999999988776654
Done!