Query 007499
Match_columns 601
No_of_seqs 190 out of 1348
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 03:15:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007499.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007499hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 8E-202 3E-206 1628.2 37.8 538 31-599 2-542 (555)
2 1o0s_A NAD-ME, NAD-dependent m 100.0 9E-201 3E-205 1627.9 37.1 545 23-599 30-579 (605)
3 1pj3_A NAD-dependent malic enz 100.0 1E-200 5E-205 1622.5 38.4 541 30-599 3-547 (564)
4 3nv9_A Malic enzyme; rossmann 100.0 2E-120 8E-125 973.4 33.2 394 106-589 44-449 (487)
5 2a9f_A Putative malic enzyme ( 100.0 2E-111 5E-116 895.9 18.5 366 106-560 19-391 (398)
6 1vl6_A Malate oxidoreductase; 100.0 1E-105 4E-110 850.2 24.4 360 104-556 21-388 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 1.7E-84 5.8E-89 699.3 26.3 389 107-594 18-420 (439)
8 3h9u_A Adenosylhomocysteinase; 98.8 1.4E-08 4.7E-13 109.7 11.6 161 254-457 132-311 (436)
9 3gvp_A Adenosylhomocysteinase 98.8 2.6E-08 8.9E-13 107.5 12.5 127 287-455 182-318 (435)
10 1x13_A NAD(P) transhydrogenase 98.4 9.5E-07 3.2E-11 94.0 10.8 227 155-445 25-295 (401)
11 3n58_A Adenosylhomocysteinase; 97.8 8.4E-05 2.9E-09 80.8 11.7 129 286-456 208-346 (464)
12 3ond_A Adenosylhomocysteinase; 97.7 7.3E-05 2.5E-09 81.9 9.9 130 286-458 226-366 (488)
13 1l7d_A Nicotinamide nucleotide 97.2 0.0035 1.2E-07 65.8 13.4 236 156-444 19-296 (384)
14 4dio_A NAD(P) transhydrogenase 96.8 0.00041 1.4E-08 74.4 2.3 112 321-451 190-322 (405)
15 3p2y_A Alanine dehydrogenase/p 96.2 0.0031 1.1E-07 67.1 4.3 106 321-445 184-305 (381)
16 3d4o_A Dipicolinate synthase s 96.1 0.029 9.8E-07 56.5 10.9 141 277-455 107-255 (293)
17 1a4i_A Methylenetetrahydrofola 95.9 0.011 3.6E-07 61.3 6.9 96 296-444 143-239 (301)
18 3l07_A Bifunctional protein fo 95.8 0.015 5E-07 59.8 7.4 92 298-442 141-233 (285)
19 3p2o_A Bifunctional protein fo 95.8 0.015 5.3E-07 59.6 7.5 96 297-445 139-236 (285)
20 4a5o_A Bifunctional protein fo 95.7 0.018 6.1E-07 59.2 7.2 95 298-445 141-237 (286)
21 1b0a_A Protein (fold bifunctio 95.6 0.015 5.3E-07 59.7 6.4 96 296-444 137-233 (288)
22 3ngx_A Bifunctional protein fo 95.4 0.023 7.8E-07 58.2 6.8 92 296-442 130-222 (276)
23 4a26_A Putative C-1-tetrahydro 95.2 0.027 9.2E-07 58.3 6.6 96 294-442 141-239 (300)
24 3tri_A Pyrroline-5-carboxylate 94.8 0.41 1.4E-05 47.8 14.0 122 321-476 3-127 (280)
25 3k92_A NAD-GDH, NAD-specific g 94.6 0.32 1.1E-05 52.5 13.4 183 242-446 125-330 (424)
26 1edz_A 5,10-methylenetetrahydr 94.5 0.03 1E-06 58.3 4.8 115 300-445 150-278 (320)
27 2c2x_A Methylenetetrahydrofola 94.4 0.046 1.6E-06 56.0 6.0 97 296-444 136-234 (281)
28 1c1d_A L-phenylalanine dehydro 94.4 0.69 2.4E-05 48.7 15.0 166 243-446 90-266 (355)
29 4fcc_A Glutamate dehydrogenase 94.3 1.6 5.5E-05 47.4 17.9 184 241-446 139-355 (450)
30 3r3j_A Glutamate dehydrogenase 94.1 1.4 4.9E-05 47.9 17.0 189 243-457 145-368 (456)
31 3aoe_E Glutamate dehydrogenase 94.0 0.48 1.7E-05 51.0 13.2 179 243-446 123-324 (419)
32 1v8b_A Adenosylhomocysteinase; 93.9 0.31 1.1E-05 53.3 11.5 124 292-457 234-357 (479)
33 3aog_A Glutamate dehydrogenase 93.3 0.71 2.4E-05 50.1 13.1 181 243-446 140-345 (440)
34 2yfq_A Padgh, NAD-GDH, NAD-spe 93.0 0.87 3E-05 49.0 13.1 180 243-445 116-326 (421)
35 3d64_A Adenosylhomocysteinase; 92.5 0.28 9.5E-06 53.9 8.6 111 296-446 258-368 (494)
36 4e12_A Diketoreductase; oxidor 92.5 0.51 1.7E-05 47.0 9.8 32 322-365 5-36 (283)
37 2rir_A Dipicolinate synthase, 92.3 0.34 1.2E-05 48.7 8.4 99 310-443 149-247 (300)
38 3fbt_A Chorismate mutase and s 91.9 0.18 6E-06 51.4 5.7 49 303-365 107-155 (282)
39 3ce6_A Adenosylhomocysteinase; 91.8 0.74 2.5E-05 50.5 10.8 109 310-457 266-374 (494)
40 3jyo_A Quinate/shikimate dehyd 91.7 0.2 6.8E-06 50.8 5.9 92 303-416 112-204 (283)
41 1gpj_A Glutamyl-tRNA reductase 91.7 1 3.6E-05 47.4 11.6 138 274-445 128-269 (404)
42 3tnl_A Shikimate dehydrogenase 91.6 0.21 7.2E-06 51.6 6.0 57 287-365 131-187 (315)
43 3t4e_A Quinate/shikimate dehyd 91.5 0.21 7.2E-06 51.6 5.9 49 303-365 133-181 (312)
44 3tum_A Shikimate dehydrogenase 91.3 0.23 7.7E-06 50.2 5.7 47 304-364 111-157 (269)
45 1pjc_A Protein (L-alanine dehy 91.2 0.21 7.1E-06 51.9 5.5 100 319-444 165-269 (361)
46 3o8q_A Shikimate 5-dehydrogena 91.1 0.21 7.1E-06 50.7 5.3 50 302-365 110-159 (281)
47 2egg_A AROE, shikimate 5-dehyd 90.9 0.21 7E-06 50.8 4.9 49 303-365 125-174 (297)
48 3don_A Shikimate dehydrogenase 90.5 0.14 4.8E-06 51.9 3.4 57 287-365 94-150 (277)
49 1pzg_A LDH, lactate dehydrogen 90.5 0.25 8.4E-06 51.0 5.2 108 322-447 10-137 (331)
50 2o4c_A Erythronate-4-phosphate 90.4 1.2 3.9E-05 47.3 10.3 200 286-537 81-292 (380)
51 3pwz_A Shikimate dehydrogenase 90.3 0.21 7.3E-06 50.3 4.5 49 303-365 104-153 (272)
52 3oet_A Erythronate-4-phosphate 90.3 1.1 3.9E-05 47.5 10.2 137 287-466 85-232 (381)
53 4e21_A 6-phosphogluconate dehy 90.0 0.71 2.4E-05 48.2 8.3 95 322-445 23-118 (358)
54 3u95_A Glycoside hydrolase, fa 89.9 0.18 6.2E-06 54.9 3.8 45 422-470 140-184 (477)
55 3k5p_A D-3-phosphoglycerate de 89.7 3 0.0001 44.8 13.0 195 285-524 102-321 (416)
56 1p77_A Shikimate 5-dehydrogena 89.7 0.29 1E-05 48.7 4.9 49 302-365 103-151 (272)
57 2zyd_A 6-phosphogluconate dehy 89.7 0.51 1.7E-05 51.2 7.1 102 321-446 15-117 (480)
58 2dpo_A L-gulonate 3-dehydrogen 89.6 2.7 9.3E-05 43.1 12.1 129 322-476 7-152 (319)
59 2tmg_A Protein (glutamate dehy 89.6 1.5 5E-05 47.2 10.5 181 244-446 115-320 (415)
60 1lu9_A Methylene tetrahydromet 89.5 2.3 7.9E-05 42.2 11.2 82 268-365 64-152 (287)
61 3dtt_A NADP oxidoreductase; st 89.3 0.51 1.7E-05 45.9 6.2 106 319-445 17-127 (245)
62 1nyt_A Shikimate 5-dehydrogena 89.0 0.45 1.6E-05 47.2 5.7 49 302-365 103-151 (271)
63 1obb_A Maltase, alpha-glucosid 88.8 0.16 5.3E-06 55.6 2.3 131 322-470 4-177 (480)
64 3fef_A Putative glucosidase LP 88.8 0.41 1.4E-05 51.9 5.6 106 322-446 6-150 (450)
65 1leh_A Leucine dehydrogenase; 88.8 0.75 2.6E-05 48.5 7.4 158 249-445 93-264 (364)
66 1mld_A Malate dehydrogenase; o 88.3 1.2 4E-05 45.6 8.3 104 323-446 2-121 (314)
67 3h8v_A Ubiquitin-like modifier 88.3 0.27 9.3E-06 50.4 3.6 36 319-365 34-69 (292)
68 3u62_A Shikimate dehydrogenase 88.2 0.42 1.4E-05 47.6 4.8 121 252-415 42-175 (253)
69 2hk9_A Shikimate dehydrogenase 88.1 0.59 2E-05 46.5 5.8 82 303-415 114-195 (275)
70 1x0v_A GPD-C, GPDH-C, glycerol 88.1 1.4 4.6E-05 44.7 8.6 114 322-446 9-128 (354)
71 2bma_A Glutamate dehydrogenase 87.9 1.3 4.5E-05 48.4 8.7 179 244-446 159-373 (470)
72 1sc6_A PGDH, D-3-phosphoglycer 87.7 6.7 0.00023 41.7 13.9 193 285-524 91-310 (404)
73 3oj0_A Glutr, glutamyl-tRNA re 87.5 0.33 1.1E-05 43.1 3.2 91 322-445 22-113 (144)
74 2rcy_A Pyrroline carboxylate r 87.3 3.1 0.00011 40.1 10.2 92 322-447 5-96 (262)
75 1txg_A Glycerol-3-phosphate de 87.1 1.1 3.6E-05 44.8 7.0 100 323-445 2-107 (335)
76 3kkj_A Amine oxidase, flavin-c 86.9 0.35 1.2E-05 43.1 3.0 32 322-365 3-34 (336)
77 2ewd_A Lactate dehydrogenase,; 86.9 0.28 9.6E-06 49.8 2.6 106 322-446 5-125 (317)
78 2eez_A Alanine dehydrogenase; 86.7 0.95 3.3E-05 47.0 6.6 101 318-444 163-268 (369)
79 3gt0_A Pyrroline-5-carboxylate 86.7 1.7 5.9E-05 42.0 8.0 123 322-476 3-126 (247)
80 2ekl_A D-3-phosphoglycerate de 86.5 3.2 0.00011 42.4 10.3 123 287-444 92-234 (313)
81 1t2d_A LDH-P, L-lactate dehydr 86.5 0.29 1E-05 50.3 2.5 129 322-472 5-155 (322)
82 3rui_A Ubiquitin-like modifier 86.3 0.32 1.1E-05 51.1 2.7 35 320-365 33-67 (340)
83 4g2n_A D-isomer specific 2-hyd 86.3 4.6 0.00016 42.1 11.5 194 286-525 117-336 (345)
84 3ba1_A HPPR, hydroxyphenylpyru 86.0 3.3 0.00011 42.8 10.2 122 287-446 111-255 (333)
85 2izz_A Pyrroline-5-carboxylate 86.0 2.4 8.1E-05 42.9 9.0 101 322-447 23-123 (322)
86 2p4q_A 6-phosphogluconate dehy 86.0 1.6 5.3E-05 47.7 8.1 101 322-446 11-113 (497)
87 2hjr_A Malate dehydrogenase; m 85.8 0.3 1E-05 50.3 2.2 129 322-472 15-160 (328)
88 1x7d_A Ornithine cyclodeaminas 85.6 2 6.9E-05 44.7 8.4 119 303-454 116-239 (350)
89 2i6t_A Ubiquitin-conjugating e 85.4 1.4 4.8E-05 45.0 7.0 120 322-469 15-151 (303)
90 1bgv_A Glutamate dehydrogenase 85.4 5.9 0.0002 43.0 12.2 184 244-446 136-351 (449)
91 2v6b_A L-LDH, L-lactate dehydr 85.4 0.31 1E-05 49.5 2.0 123 323-468 2-139 (304)
92 1s6y_A 6-phospho-beta-glucosid 85.3 0.27 9.2E-06 53.2 1.6 131 322-468 8-175 (450)
93 2h78_A Hibadh, 3-hydroxyisobut 85.0 1 3.6E-05 44.6 5.7 32 322-365 4-35 (302)
94 2vhw_A Alanine dehydrogenase; 84.9 1 3.6E-05 47.0 5.9 99 318-442 165-268 (377)
95 3i83_A 2-dehydropantoate 2-red 84.9 0.91 3.1E-05 45.9 5.2 104 322-446 3-109 (320)
96 1hyh_A L-hicdh, L-2-hydroxyiso 84.5 0.73 2.5E-05 46.5 4.3 106 322-446 2-126 (309)
97 1u8x_X Maltose-6'-phosphate gl 84.5 0.25 8.7E-06 53.8 1.0 130 322-468 29-194 (472)
98 4dgs_A Dehydrogenase; structur 84.3 4.5 0.00015 42.1 10.3 127 297-463 130-277 (340)
99 2iz1_A 6-phosphogluconate dehy 84.2 1.6 5.5E-05 47.0 7.1 101 322-446 6-107 (474)
100 4hy3_A Phosphoglycerate oxidor 84.1 2.8 9.5E-05 44.2 8.7 132 296-464 133-286 (365)
101 1yj8_A Glycerol-3-phosphate de 84.1 1.3 4.6E-05 45.6 6.2 114 322-446 22-145 (375)
102 2pgd_A 6-phosphogluconate dehy 84.0 1.7 5.7E-05 47.0 7.1 101 322-446 3-105 (482)
103 1wwk_A Phosphoglycerate dehydr 84.0 4.1 0.00014 41.5 9.7 114 296-444 102-234 (307)
104 3k96_A Glycerol-3-phosphate de 83.9 2.3 7.8E-05 44.2 7.9 105 322-446 30-137 (356)
105 2gcg_A Glyoxylate reductase/hy 83.8 4.1 0.00014 41.7 9.7 124 286-443 99-247 (330)
106 4gsl_A Ubiquitin-like modifier 83.8 0.56 1.9E-05 52.8 3.4 35 321-366 326-360 (615)
107 4gwg_A 6-phosphogluconate dehy 83.6 2.5 8.5E-05 46.2 8.3 102 322-446 5-107 (484)
108 1b8p_A Protein (malate dehydro 83.4 1.3 4.6E-05 45.3 5.8 121 322-459 6-147 (329)
109 3gvx_A Glycerate dehydrogenase 83.4 8.2 0.00028 39.2 11.6 160 317-525 118-281 (290)
110 1npy_A Hypothetical shikimate 83.3 1.1 3.6E-05 45.2 4.9 48 303-365 105-152 (271)
111 4fgw_A Glycerol-3-phosphate de 83.3 1.9 6.5E-05 45.9 7.1 105 322-441 35-150 (391)
112 1jw9_B Molybdopterin biosynthe 83.3 0.52 1.8E-05 46.5 2.6 34 322-366 32-65 (249)
113 2yq5_A D-isomer specific 2-hyd 83.1 7.6 0.00026 40.4 11.4 133 287-456 94-250 (343)
114 3d1l_A Putative NADP oxidoredu 82.9 0.9 3.1E-05 44.1 4.1 96 322-446 11-106 (266)
115 1o6z_A MDH, malate dehydrogena 82.9 1.3 4.3E-05 45.0 5.3 113 323-458 2-132 (303)
116 3qsg_A NAD-binding phosphogluc 82.9 3.4 0.00012 41.7 8.5 33 322-365 25-57 (312)
117 1zud_1 Adenylyltransferase THI 82.8 0.52 1.8E-05 46.6 2.4 33 322-365 29-61 (251)
118 2j6i_A Formate dehydrogenase; 82.8 2.6 8.9E-05 44.1 7.8 144 286-466 109-279 (364)
119 1ks9_A KPA reductase;, 2-dehyd 82.8 2 6.8E-05 41.7 6.5 100 323-446 2-101 (291)
120 3hg7_A D-isomer specific 2-hyd 82.7 3.1 0.00011 43.0 8.3 178 297-525 103-302 (324)
121 1xdw_A NAD+-dependent (R)-2-hy 82.7 4.9 0.00017 41.3 9.7 123 285-444 91-236 (331)
122 3mw9_A GDH 1, glutamate dehydr 82.5 1.7 5.8E-05 47.8 6.4 183 242-445 135-352 (501)
123 3doj_A AT3G25530, dehydrogenas 82.4 1.8 6E-05 43.6 6.2 32 322-365 22-53 (310)
124 2d0i_A Dehydrogenase; structur 82.4 5.3 0.00018 41.1 9.9 90 318-443 143-236 (333)
125 2cuk_A Glycerate dehydrogenase 82.4 6.9 0.00023 39.9 10.6 120 287-446 89-233 (311)
126 3jtm_A Formate dehydrogenase, 82.2 5.5 0.00019 41.6 10.0 176 286-498 109-308 (351)
127 1bg6_A N-(1-D-carboxylethyl)-L 82.1 1.9 6.7E-05 43.2 6.4 100 322-443 5-110 (359)
128 1y6j_A L-lactate dehydrogenase 82.1 2.5 8.7E-05 43.1 7.3 112 322-458 8-136 (318)
129 3pef_A 6-phosphogluconate dehy 82.0 1.6 5.4E-05 43.2 5.5 32 322-365 2-33 (287)
130 1pgj_A 6PGDH, 6-PGDH, 6-phosph 82.0 1.5 5.1E-05 47.4 5.8 105 322-446 2-107 (478)
131 1nvt_A Shikimate 5'-dehydrogen 81.9 1.4 4.7E-05 44.0 5.1 49 301-365 111-159 (287)
132 3h5n_A MCCB protein; ubiquitin 81.8 0.77 2.6E-05 47.8 3.3 33 322-365 119-151 (353)
133 4b4u_A Bifunctional protein fo 81.8 2.7 9.1E-05 43.5 7.2 84 298-427 159-243 (303)
134 2qrj_A Saccharopine dehydrogen 81.4 2.1 7.3E-05 45.7 6.6 71 321-428 214-289 (394)
135 1v9l_A Glutamate dehydrogenase 81.2 2 7E-05 46.2 6.4 179 244-446 116-326 (421)
136 2zqz_A L-LDH, L-lactate dehydr 80.9 1.1 3.9E-05 46.1 4.2 114 322-458 10-138 (326)
137 1up7_A 6-phospho-beta-glucosid 80.9 1.6 5.4E-05 46.7 5.4 126 322-468 3-164 (417)
138 2d5c_A AROE, shikimate 5-dehyd 80.8 1.5 5.2E-05 43.0 4.9 47 303-365 102-148 (263)
139 2i99_A MU-crystallin homolog; 80.6 4.2 0.00015 41.1 8.3 98 322-452 136-237 (312)
140 3pdu_A 3-hydroxyisobutyrate de 80.5 1.6 5.6E-05 43.0 5.1 32 322-365 2-33 (287)
141 2d4a_B Malate dehydrogenase; a 80.5 0.93 3.2E-05 46.2 3.3 113 323-457 1-128 (308)
142 2pi1_A D-lactate dehydrogenase 80.5 7.5 0.00026 40.2 10.2 143 286-466 87-252 (334)
143 1ez4_A Lactate dehydrogenase; 80.3 1.2 4.2E-05 45.6 4.2 114 322-458 6-134 (318)
144 3ghy_A Ketopantoate reductase 80.3 1.2 4E-05 45.3 4.0 103 322-445 4-107 (335)
145 3vh1_A Ubiquitin-like modifier 80.1 0.66 2.3E-05 52.1 2.2 37 315-365 324-360 (598)
146 3ggo_A Prephenate dehydrogenas 80.1 2.4 8.2E-05 43.1 6.2 34 322-365 34-67 (314)
147 1dxy_A D-2-hydroxyisocaproate 79.9 8.2 0.00028 39.7 10.2 142 286-466 91-255 (333)
148 1y8q_A Ubiquitin-like 1 activa 79.4 1 3.4E-05 46.9 3.2 33 322-365 37-69 (346)
149 3cky_A 2-hydroxymethyl glutara 79.2 2 6.8E-05 42.3 5.2 32 322-365 5-36 (301)
150 3evt_A Phosphoglycerate dehydr 79.2 8.2 0.00028 39.8 10.0 142 285-463 83-246 (324)
151 1a5z_A L-lactate dehydrogenase 79.1 1.4 5E-05 44.7 4.2 105 323-447 2-121 (319)
152 1j4a_A D-LDH, D-lactate dehydr 79.1 8.2 0.00028 39.6 9.9 144 285-466 92-257 (333)
153 1smk_A Malate dehydrogenase, g 78.8 1.5 5.2E-05 44.9 4.3 104 322-446 9-129 (326)
154 4huj_A Uncharacterized protein 78.7 1.6 5.6E-05 41.6 4.2 93 322-446 24-117 (220)
155 4dll_A 2-hydroxy-3-oxopropiona 78.6 1.8 6.3E-05 43.7 4.8 32 322-365 32-63 (320)
156 1oju_A MDH, malate dehydrogena 78.6 1.3 4.5E-05 45.1 3.7 115 323-458 2-131 (294)
157 2nac_A NAD-dependent formate d 78.3 4.9 0.00017 42.7 8.1 144 286-464 136-303 (393)
158 1ldn_A L-lactate dehydrogenase 78.3 0.67 2.3E-05 47.3 1.4 114 322-457 7-135 (316)
159 3b1f_A Putative prephenate deh 77.7 2.1 7.2E-05 42.1 4.8 97 322-445 7-104 (290)
160 1ur5_A Malate dehydrogenase; o 77.5 1.4 4.9E-05 44.7 3.7 106 322-446 3-123 (309)
161 1guz_A Malate dehydrogenase; o 77.5 0.91 3.1E-05 46.1 2.2 106 323-446 2-122 (310)
162 3pp8_A Glyoxylate/hydroxypyruv 77.4 5.7 0.0002 40.8 8.1 185 295-525 100-301 (315)
163 2dbq_A Glyoxylate reductase; D 77.3 4.6 0.00016 41.5 7.4 123 286-443 90-241 (334)
164 1vpd_A Tartronate semialdehyde 77.3 1.9 6.4E-05 42.5 4.3 32 322-365 6-37 (299)
165 3qha_A Putative oxidoreductase 77.0 2.8 9.6E-05 41.8 5.5 32 322-365 16-47 (296)
166 3c24_A Putative oxidoreductase 76.9 2 6.9E-05 42.3 4.4 93 322-446 12-105 (286)
167 1hyu_A AHPF, alkyl hydroperoxi 76.7 1.1 3.6E-05 48.6 2.5 103 251-365 134-244 (521)
168 1gtm_A Glutamate dehydrogenase 76.6 2.9 9.9E-05 44.8 5.8 110 244-368 115-249 (419)
169 1qp8_A Formate dehydrogenase; 76.4 13 0.00044 37.8 10.4 120 285-443 71-211 (303)
170 3hn2_A 2-dehydropantoate 2-red 76.4 1.8 6.2E-05 43.5 4.0 103 322-446 3-107 (312)
171 3vrd_B FCCB subunit, flavocyto 76.4 1.9 6.5E-05 44.0 4.2 35 321-365 2-36 (401)
172 2uyy_A N-PAC protein; long-cha 76.3 3.1 0.00011 41.5 5.6 32 322-365 31-62 (316)
173 3kb6_A D-lactate dehydrogenase 75.7 11 0.00037 38.9 9.7 121 287-443 88-231 (334)
174 4e5n_A Thermostable phosphite 75.7 5.4 0.00019 41.1 7.4 143 286-464 90-256 (330)
175 4hb9_A Similarities with proba 75.4 1.6 5.6E-05 43.7 3.4 32 322-365 2-33 (412)
176 3vku_A L-LDH, L-lactate dehydr 75.3 2.6 8.9E-05 43.7 4.9 114 322-458 10-138 (326)
177 2w2k_A D-mandelate dehydrogena 75.3 6.4 0.00022 40.7 7.8 111 318-463 160-275 (348)
178 3phh_A Shikimate dehydrogenase 75.0 1.6 5.6E-05 44.1 3.2 43 304-365 108-150 (269)
179 1mx3_A CTBP1, C-terminal bindi 74.9 15 0.00051 38.2 10.5 192 286-524 108-333 (347)
180 2pv7_A T-protein [includes: ch 74.9 5 0.00017 40.1 6.8 32 322-365 22-54 (298)
181 1hdo_A Biliverdin IX beta redu 74.8 6.2 0.00021 35.5 6.8 74 322-417 4-78 (206)
182 3gvi_A Malate dehydrogenase; N 74.5 2.2 7.5E-05 44.1 4.1 115 322-458 8-137 (324)
183 2g76_A 3-PGDH, D-3-phosphoglyc 74.4 12 0.00041 38.7 9.6 126 286-446 112-259 (335)
184 2cvz_A Dehydrogenase, 3-hydrox 74.3 1.8 6.1E-05 42.2 3.2 31 322-365 2-32 (289)
185 3g0o_A 3-hydroxyisobutyrate de 74.3 1.6 5.4E-05 43.6 2.9 32 322-365 8-39 (303)
186 1yb4_A Tartronic semialdehyde 74.1 2.9 9.8E-05 40.9 4.7 21 322-342 4-24 (295)
187 1tt5_B Ubiquitin-activating en 73.7 1.4 4.7E-05 47.5 2.4 33 322-365 41-73 (434)
188 2xxj_A L-LDH, L-lactate dehydr 73.3 1.4 4.9E-05 44.9 2.4 113 323-458 2-129 (310)
189 3gg9_A D-3-phosphoglycerate de 72.2 11 0.00039 39.2 8.9 197 286-525 98-325 (352)
190 3fbs_A Oxidoreductase; structu 72.0 2.3 8E-05 40.6 3.4 32 322-365 3-34 (297)
191 3d1c_A Flavin-containing putat 71.9 2.3 7.7E-05 42.4 3.4 34 322-366 5-38 (369)
192 1hye_A L-lactate/malate dehydr 71.3 2.3 8E-05 43.1 3.4 116 323-458 2-135 (313)
193 4egb_A DTDP-glucose 4,6-dehydr 71.2 8 0.00027 38.2 7.2 104 322-442 25-149 (346)
194 2z2v_A Hypothetical protein PH 70.8 3.9 0.00013 42.6 4.9 121 322-474 17-137 (365)
195 2g1u_A Hypothetical protein TM 70.7 3.3 0.00011 36.9 3.9 32 322-365 20-51 (155)
196 1y8q_B Anthracycline-, ubiquit 70.6 1.9 6.7E-05 48.7 2.8 33 322-365 18-50 (640)
197 4a7p_A UDP-glucose dehydrogena 70.5 4.5 0.00016 43.5 5.5 45 407-452 122-166 (446)
198 3f8d_A Thioredoxin reductase ( 70.5 2.6 9E-05 40.6 3.4 32 322-365 16-47 (323)
199 3d0o_A L-LDH 1, L-lactate dehy 70.3 2.9 0.0001 42.6 3.9 115 322-458 7-136 (317)
200 4a9w_A Monooxygenase; baeyer-v 70.3 2 6.7E-05 42.1 2.5 33 322-366 4-36 (357)
201 2g5c_A Prephenate dehydrogenas 70.0 5 0.00017 39.1 5.3 99 322-446 2-100 (281)
202 3hwr_A 2-dehydropantoate 2-red 70.0 1.9 6.5E-05 43.6 2.3 106 321-447 19-125 (318)
203 3tl2_A Malate dehydrogenase; c 70.0 1.5 5E-05 45.2 1.5 114 322-457 9-139 (315)
204 3fi9_A Malate dehydrogenase; s 70.0 4.3 0.00015 42.3 5.0 118 319-459 6-140 (343)
205 3p7m_A Malate dehydrogenase; p 69.3 1.6 5.4E-05 45.0 1.5 117 321-459 5-136 (321)
206 3hdj_A Probable ornithine cycl 69.2 21 0.00071 36.4 9.9 102 322-455 122-227 (313)
207 2zbw_A Thioredoxin reductase; 69.2 2.9 9.9E-05 41.1 3.4 33 322-366 6-38 (335)
208 3fys_A Protein DEGV; fatty aci 69.1 2.7 9.4E-05 43.3 3.3 141 170-356 33-179 (315)
209 3l6d_A Putative oxidoreductase 69.0 3.1 0.00011 41.7 3.7 32 322-365 10-41 (306)
210 3lzw_A Ferredoxin--NADP reduct 68.9 2.8 9.7E-05 40.7 3.3 32 322-365 8-39 (332)
211 3pdi_B Nitrogenase MOFE cofact 68.8 5.4 0.00018 43.0 5.7 183 149-415 177-384 (458)
212 3h8l_A NADH oxidase; membrane 68.7 3.3 0.00011 42.5 3.8 36 322-366 2-37 (409)
213 3fg2_P Putative rubredoxin red 68.4 3 0.0001 43.0 3.4 36 322-367 2-37 (404)
214 3nep_X Malate dehydrogenase; h 68.3 1.7 5.7E-05 44.8 1.5 114 323-457 2-130 (314)
215 2hmt_A YUAA protein; RCK, KTN, 68.1 2.7 9.1E-05 35.9 2.6 32 322-365 7-38 (144)
216 3iwa_A FAD-dependent pyridine 67.6 3.4 0.00012 43.5 3.8 36 322-367 4-39 (472)
217 3oz2_A Digeranylgeranylglycero 67.3 3 0.0001 41.4 3.0 30 324-365 7-36 (397)
218 3c85_A Putative glutathione-re 67.0 4.1 0.00014 37.2 3.7 35 320-365 38-72 (183)
219 3itj_A Thioredoxin reductase 1 66.9 2.5 8.5E-05 41.2 2.4 32 322-365 23-54 (338)
220 4ezb_A Uncharacterized conserv 66.7 5.5 0.00019 40.4 5.0 33 322-365 25-57 (317)
221 2gf2_A Hibadh, 3-hydroxyisobut 66.7 7.2 0.00025 38.1 5.7 31 323-365 2-32 (296)
222 2ywl_A Thioredoxin reductase r 66.7 3.8 0.00013 36.8 3.4 32 322-365 2-33 (180)
223 3axb_A Putative oxidoreductase 66.7 4.8 0.00016 41.7 4.6 32 322-364 24-55 (448)
224 3hyw_A Sulfide-quinone reducta 66.5 4.3 0.00015 42.4 4.3 34 322-365 3-36 (430)
225 3m6i_A L-arabinitol 4-dehydrog 66.4 7.5 0.00026 39.4 5.9 58 292-364 155-212 (363)
226 1y7t_A Malate dehydrogenase; N 66.4 2.8 9.5E-05 42.5 2.7 110 322-445 5-133 (327)
227 3llv_A Exopolyphosphatase-rela 66.0 3.8 0.00013 35.6 3.1 32 322-365 7-38 (141)
228 3ic5_A Putative saccharopine d 65.9 3.5 0.00012 34.0 2.8 85 322-430 6-91 (118)
229 1lss_A TRK system potassium up 65.8 4.5 0.00015 34.4 3.5 32 322-365 5-36 (140)
230 3pqe_A L-LDH, L-lactate dehydr 65.5 2.4 8.3E-05 43.8 2.1 115 322-458 6-135 (326)
231 2q7v_A Thioredoxin reductase; 65.4 3.8 0.00013 40.2 3.4 32 322-365 9-40 (325)
232 3rp8_A Flavoprotein monooxygen 65.3 4 0.00014 41.7 3.7 34 321-366 23-56 (407)
233 4ej6_A Putative zinc-binding d 65.2 12 0.0004 38.5 7.1 109 293-428 159-274 (370)
234 2xdo_A TETX2 protein; tetracyc 65.2 3.7 0.00013 42.0 3.4 33 322-366 27-59 (398)
235 2jae_A L-amino acid oxidase; o 65.1 3.5 0.00012 43.3 3.2 35 322-368 12-46 (489)
236 1yvv_A Amine oxidase, flavin-c 65.1 3.6 0.00012 40.3 3.2 33 322-366 3-35 (336)
237 1pqw_A Polyketide synthase; ro 65.1 11 0.00039 34.4 6.4 50 301-365 22-72 (198)
238 3alj_A 2-methyl-3-hydroxypyrid 65.1 4 0.00014 41.4 3.5 34 322-367 12-45 (379)
239 1ryi_A Glycine oxidase; flavop 65.1 3.7 0.00013 41.1 3.3 34 322-367 18-51 (382)
240 3dme_A Conserved exported prot 64.9 4 0.00014 40.1 3.5 32 322-365 5-36 (369)
241 1id1_A Putative potassium chan 64.5 4.7 0.00016 35.8 3.5 33 321-365 3-35 (153)
242 3fwz_A Inner membrane protein 64.5 4.3 0.00015 35.7 3.3 32 322-365 8-39 (140)
243 1np3_A Ketol-acid reductoisome 64.4 5.7 0.0002 40.6 4.6 87 322-439 17-104 (338)
244 3r9u_A Thioredoxin reductase; 64.3 3.7 0.00013 39.5 3.0 32 322-365 5-37 (315)
245 1pl8_A Human sorbitol dehydrog 64.3 9.8 0.00033 38.6 6.3 49 301-364 156-204 (356)
246 3cgv_A Geranylgeranyl reductas 64.3 3.9 0.00013 41.0 3.3 34 322-367 5-38 (397)
247 2x0j_A Malate dehydrogenase; o 64.2 4.3 0.00015 41.5 3.6 115 323-458 2-131 (294)
248 3cty_A Thioredoxin reductase; 64.1 4.2 0.00014 39.8 3.4 32 322-365 17-48 (319)
249 2gf3_A MSOX, monomeric sarcosi 64.1 3.9 0.00013 40.9 3.3 35 322-368 4-38 (389)
250 4eez_A Alcohol dehydrogenase 1 64.0 12 0.00041 37.4 6.9 49 301-364 148-196 (348)
251 3s5w_A L-ornithine 5-monooxyge 64.0 4.8 0.00016 41.9 4.0 39 322-367 31-69 (463)
252 1y56_B Sarcosine oxidase; dehy 63.7 3.8 0.00013 41.1 3.1 33 322-366 6-38 (382)
253 3ado_A Lambda-crystallin; L-gu 63.1 4.2 0.00014 42.0 3.3 32 322-365 7-38 (319)
254 3k7m_X 6-hydroxy-L-nicotine ox 62.9 4.5 0.00016 41.3 3.5 33 322-366 2-34 (431)
255 2vdc_G Glutamate synthase [NAD 62.9 4.7 0.00016 43.0 3.8 34 321-366 122-155 (456)
256 1ygy_A PGDH, D-3-phosphoglycer 62.9 23 0.00078 38.7 9.3 122 287-443 90-233 (529)
257 3ef6_A Toluene 1,2-dioxygenase 62.8 4.9 0.00017 41.6 3.8 37 322-368 3-39 (410)
258 2vou_A 2,6-dihydroxypyridine h 62.7 5 0.00017 41.0 3.8 33 322-366 6-38 (397)
259 3ab1_A Ferredoxin--NADP reduct 62.6 4.5 0.00015 40.4 3.3 33 322-366 15-47 (360)
260 1c0p_A D-amino acid oxidase; a 62.6 5.4 0.00019 39.9 4.0 33 322-366 7-39 (363)
261 2gqw_A Ferredoxin reductase; f 62.6 5.4 0.00018 41.4 4.1 37 322-368 8-44 (408)
262 3lxd_A FAD-dependent pyridine 62.3 4.5 0.00015 41.7 3.4 36 322-367 10-45 (415)
263 2uzz_A N-methyl-L-tryptophan o 62.3 4.1 0.00014 40.6 3.0 35 322-368 3-37 (372)
264 3kd9_A Coenzyme A disulfide re 62.1 5.8 0.0002 41.4 4.2 36 321-366 3-38 (449)
265 3c96_A Flavin-containing monoo 62.0 4.8 0.00016 41.3 3.5 34 322-366 5-38 (410)
266 2x3n_A Probable FAD-dependent 61.9 4.5 0.00015 41.1 3.3 33 322-366 7-39 (399)
267 2gag_B Heterotetrameric sarcos 61.8 4.7 0.00016 40.6 3.4 35 322-366 22-56 (405)
268 3nix_A Flavoprotein/dehydrogen 61.6 3.9 0.00013 41.6 2.7 33 322-366 6-38 (421)
269 2oln_A NIKD protein; flavoprot 61.4 4.8 0.00017 40.7 3.4 35 322-368 5-39 (397)
270 3c4a_A Probable tryptophan hyd 60.8 5.9 0.0002 40.3 3.9 34 323-366 2-35 (381)
271 1f0y_A HCDH, L-3-hydroxyacyl-C 60.8 5.2 0.00018 39.8 3.4 32 322-365 16-47 (302)
272 3ics_A Coenzyme A-disulfide re 60.3 6 0.0002 43.0 4.1 36 322-367 37-72 (588)
273 3g3e_A D-amino-acid oxidase; F 60.2 7.6 0.00026 38.7 4.5 37 323-366 2-39 (351)
274 1zk7_A HGII, reductase, mercur 59.9 5.8 0.0002 41.6 3.8 32 322-365 5-36 (467)
275 3i6d_A Protoporphyrinogen oxid 59.8 7.1 0.00024 40.1 4.3 38 322-365 6-43 (470)
276 1vdc_A NTR, NADPH dependent th 59.7 4.2 0.00015 39.8 2.5 31 322-364 9-39 (333)
277 1tt5_A APPBP1, amyloid protein 59.7 3 0.0001 46.0 1.6 33 322-365 33-65 (531)
278 1k0i_A P-hydroxybenzoate hydro 59.6 5.6 0.00019 40.2 3.5 33 322-366 3-35 (394)
279 2xve_A Flavin-containing monoo 59.6 5 0.00017 42.5 3.3 38 322-365 3-40 (464)
280 2bc0_A NADH oxidase; flavoprot 59.6 7.6 0.00026 41.3 4.6 36 322-366 36-71 (490)
281 2q0l_A TRXR, thioredoxin reduc 59.6 5.5 0.00019 38.6 3.3 33 322-365 2-34 (311)
282 2weu_A Tryptophan 5-halogenase 59.4 5.3 0.00018 42.4 3.4 37 322-367 3-39 (511)
283 3c4n_A Uncharacterized protein 59.1 6.7 0.00023 40.4 4.0 35 322-366 37-71 (405)
284 1lqt_A FPRA; NADP+ derivative, 59.1 6.1 0.00021 42.0 3.8 38 321-365 3-42 (456)
285 4eqs_A Coenzyme A disulfide re 59.0 5.3 0.00018 42.0 3.3 34 323-366 2-35 (437)
286 4g6h_A Rotenone-insensitive NA 59.0 3.4 0.00012 44.6 1.8 32 322-365 43-74 (502)
287 3gg2_A Sugar dehydrogenase, UD 58.7 18 0.00061 38.7 7.4 32 322-365 3-34 (450)
288 3dje_A Fructosyl amine: oxygen 58.7 6 0.00021 40.7 3.6 36 322-368 7-42 (438)
289 2dq4_A L-threonine 3-dehydroge 58.7 8.4 0.00029 38.8 4.6 54 295-364 143-197 (343)
290 3oc4_A Oxidoreductase, pyridin 58.6 6.3 0.00021 41.3 3.8 36 322-367 3-38 (452)
291 4a2c_A Galactitol-1-phosphate 58.6 19 0.00064 36.0 7.1 55 295-364 139-193 (346)
292 2cul_A Glucose-inhibited divis 58.2 6.1 0.00021 37.6 3.3 32 322-365 4-35 (232)
293 3uox_A Otemo; baeyer-villiger 58.0 6.3 0.00021 43.0 3.7 34 322-367 10-43 (545)
294 3ka7_A Oxidoreductase; structu 57.9 6.5 0.00022 40.0 3.6 32 323-366 2-33 (425)
295 3lk7_A UDP-N-acetylmuramoylala 57.7 6.9 0.00024 41.5 3.9 36 318-365 6-41 (451)
296 3i3l_A Alkylhalidase CMLS; fla 57.6 6.4 0.00022 43.6 3.8 34 320-365 22-55 (591)
297 2nvu_B Maltose binding protein 57.5 3.6 0.00012 46.9 1.8 35 320-365 410-444 (805)
298 3nrn_A Uncharacterized protein 57.5 6.6 0.00023 40.2 3.6 33 323-367 2-34 (421)
299 3ihm_A Styrene monooxygenase A 57.4 5.9 0.0002 41.3 3.3 32 322-365 23-54 (430)
300 3ntd_A FAD-dependent pyridine 57.3 6.8 0.00023 42.0 3.8 36 322-367 2-37 (565)
301 3h28_A Sulfide-quinone reducta 57.2 6.2 0.00021 41.0 3.4 35 322-366 3-37 (430)
302 1trb_A Thioredoxin reductase; 57.2 4.4 0.00015 39.4 2.2 32 322-365 6-37 (320)
303 1dxl_A Dihydrolipoamide dehydr 56.8 7.4 0.00025 40.8 3.9 32 322-365 7-38 (470)
304 3cmm_A Ubiquitin-activating en 56.6 6.1 0.00021 47.0 3.6 37 315-365 24-60 (1015)
305 1xdi_A RV3303C-LPDA; reductase 56.6 7.2 0.00025 41.4 3.9 36 322-366 3-38 (499)
306 2cdu_A NADPH oxidase; flavoenz 56.5 7.8 0.00027 40.5 4.0 34 323-366 2-35 (452)
307 3qy9_A DHPR, dihydrodipicolina 56.4 25 0.00086 34.7 7.5 21 322-342 4-24 (243)
308 3fpz_A Thiazole biosynthetic e 56.3 9.7 0.00033 37.8 4.6 34 322-365 66-99 (326)
309 3cgb_A Pyridine nucleotide-dis 56.2 7.6 0.00026 41.1 3.9 36 322-367 37-72 (480)
310 2e4g_A Tryptophan halogenase; 56.2 6.3 0.00021 42.7 3.4 37 322-367 26-62 (550)
311 3sx6_A Sulfide-quinone reducta 56.1 6.5 0.00022 41.0 3.4 36 322-366 5-40 (437)
312 4gcm_A TRXR, thioredoxin reduc 56.1 6.5 0.00022 38.3 3.2 31 323-365 8-38 (312)
313 2d8a_A PH0655, probable L-thre 56.1 8.1 0.00028 39.0 4.0 48 301-364 153-200 (348)
314 3urh_A Dihydrolipoyl dehydroge 56.0 6.5 0.00022 41.7 3.4 33 322-366 26-58 (491)
315 1nhp_A NADH peroxidase; oxidor 55.9 8.2 0.00028 40.3 4.1 34 323-366 2-35 (447)
316 4ap3_A Steroid monooxygenase; 55.9 6.4 0.00022 43.0 3.4 34 322-367 22-55 (549)
317 3qj4_A Renalase; FAD/NAD(P)-bi 55.5 4.6 0.00016 40.2 2.0 35 322-365 2-36 (342)
318 2qcu_A Aerobic glycerol-3-phos 55.5 6.4 0.00022 42.0 3.2 33 322-366 4-36 (501)
319 1m6i_A Programmed cell death p 55.4 11 0.00037 40.3 5.0 35 322-366 12-46 (493)
320 3k30_A Histamine dehydrogenase 55.2 8.3 0.00028 43.1 4.2 33 322-366 392-424 (690)
321 2raf_A Putative dinucleotide-b 54.7 7.8 0.00027 36.7 3.4 33 321-365 19-51 (209)
322 1zmd_A Dihydrolipoyl dehydroge 54.6 7.1 0.00024 41.1 3.4 33 322-366 7-39 (474)
323 2a87_A TRXR, TR, thioredoxin r 54.6 6 0.0002 39.1 2.6 32 322-365 15-46 (335)
324 3fpc_A NADP-dependent alcohol 54.5 8.1 0.00028 39.1 3.7 49 301-364 151-199 (352)
325 3lov_A Protoporphyrinogen oxid 54.4 9.9 0.00034 39.5 4.4 35 322-366 5-39 (475)
326 3v76_A Flavoprotein; structura 54.3 6.6 0.00022 41.4 3.0 34 322-367 28-61 (417)
327 3nrc_A Enoyl-[acyl-carrier-pro 54.3 7.9 0.00027 37.8 3.5 40 318-366 23-62 (280)
328 2yqu_A 2-oxoglutarate dehydrog 54.2 7.4 0.00025 40.7 3.4 33 322-366 2-34 (455)
329 2hqm_A GR, grase, glutathione 54.2 6.9 0.00024 41.4 3.2 33 322-366 12-44 (479)
330 2aqj_A Tryptophan halogenase, 54.1 7.1 0.00024 41.9 3.3 36 322-366 6-41 (538)
331 3ldh_A Lactate dehydrogenase; 54.1 3.5 0.00012 42.9 0.9 116 322-459 22-152 (330)
332 2qae_A Lipoamide, dihydrolipoy 53.9 7.5 0.00026 40.8 3.4 33 322-366 3-35 (468)
333 1fl2_A Alkyl hydroperoxide red 53.8 6.7 0.00023 38.0 2.8 32 322-365 2-33 (310)
334 1mo9_A ORF3; nucleotide bindin 53.8 7.3 0.00025 41.9 3.4 33 322-366 44-76 (523)
335 2r9z_A Glutathione amide reduc 53.8 8 0.00027 40.8 3.6 32 322-365 5-36 (463)
336 2gv8_A Monooxygenase; FMO, FAD 53.7 8.9 0.0003 40.0 3.9 35 322-366 7-41 (447)
337 3hhp_A Malate dehydrogenase; M 53.3 16 0.00054 37.4 5.6 105 323-446 2-122 (312)
338 2o7s_A DHQ-SDH PR, bifunctiona 53.2 6.6 0.00023 42.7 2.9 35 319-365 362-396 (523)
339 2bry_A NEDD9 interacting prote 53.2 8.6 0.00029 41.2 3.8 35 322-368 93-127 (497)
340 1ebd_A E3BD, dihydrolipoamide 53.1 6.9 0.00024 40.9 3.0 32 322-365 4-35 (455)
341 4id9_A Short-chain dehydrogena 52.9 24 0.00084 34.7 6.8 95 319-442 17-126 (347)
342 2a8x_A Dihydrolipoyl dehydroge 52.9 6.7 0.00023 41.1 2.8 32 322-365 4-35 (464)
343 1yqd_A Sinapyl alcohol dehydro 52.9 20 0.00069 36.6 6.3 47 303-364 173-219 (366)
344 1w4x_A Phenylacetone monooxyge 52.8 7.8 0.00027 41.9 3.4 34 322-367 17-50 (542)
345 1e3j_A NADP(H)-dependent ketos 52.5 18 0.00062 36.5 5.9 54 295-364 147-200 (352)
346 2eq6_A Pyruvate dehydrogenase 52.4 8.2 0.00028 40.7 3.4 33 322-366 7-39 (464)
347 3r6d_A NAD-dependent epimerase 52.4 8.9 0.0003 35.6 3.3 95 322-440 6-106 (221)
348 1q1r_A Putidaredoxin reductase 52.2 9.1 0.00031 40.0 3.7 36 322-367 5-40 (431)
349 1ges_A Glutathione reductase; 52.1 7.1 0.00024 41.0 2.9 32 322-365 5-36 (450)
350 1e6u_A GDP-fucose synthetase; 52.0 15 0.0005 35.8 5.0 87 321-442 3-107 (321)
351 1v59_A Dihydrolipoamide dehydr 51.7 9.2 0.00031 40.2 3.6 33 322-366 6-38 (478)
352 3m2p_A UDP-N-acetylglucosamine 51.5 34 0.0012 33.3 7.5 94 322-442 3-109 (311)
353 2ph5_A Homospermidine synthase 51.4 16 0.00056 40.0 5.6 97 322-443 14-115 (480)
354 3dfz_A SIRC, precorrin-2 dehyd 51.4 6.8 0.00023 38.5 2.4 35 319-365 29-63 (223)
355 1z82_A Glycerol-3-phosphate de 51.4 9.4 0.00032 38.5 3.5 101 322-447 15-116 (335)
356 3l8k_A Dihydrolipoyl dehydroge 51.1 9 0.00031 40.3 3.5 34 322-367 5-38 (466)
357 1wly_A CAAR, 2-haloacrylate re 51.0 19 0.00066 35.9 5.8 52 299-365 127-179 (333)
358 4b63_A L-ornithine N5 monooxyg 50.9 8 0.00027 41.5 3.1 23 323-345 41-63 (501)
359 3gwf_A Cyclohexanone monooxyge 50.9 7.2 0.00024 42.5 2.7 34 322-366 9-42 (540)
360 2ew2_A 2-dehydropantoate 2-red 50.8 9.4 0.00032 37.2 3.3 108 322-446 4-112 (316)
361 4f3y_A DHPR, dihydrodipicolina 50.8 47 0.0016 33.3 8.5 94 322-439 8-102 (272)
362 1onf_A GR, grase, glutathione 50.8 8.4 0.00029 41.1 3.2 33 322-366 3-35 (500)
363 2e1m_A L-glutamate oxidase; L- 50.7 9.4 0.00032 40.1 3.5 32 322-365 45-76 (376)
364 3ihg_A RDME; flavoenzyme, anth 50.6 7.9 0.00027 41.4 3.0 33 322-366 6-38 (535)
365 3o0h_A Glutathione reductase; 50.0 9.8 0.00034 40.3 3.6 32 322-365 27-58 (484)
366 4a5l_A Thioredoxin reductase; 49.8 7.6 0.00026 37.6 2.5 31 323-365 6-36 (314)
367 1lvl_A Dihydrolipoamide dehydr 49.7 9.1 0.00031 40.3 3.2 32 322-365 6-37 (458)
368 1lld_A L-lactate dehydrogenase 49.7 10 0.00036 37.6 3.5 107 322-447 8-129 (319)
369 1rsg_A FMS1 protein; FAD bindi 49.6 9.1 0.00031 40.7 3.2 22 322-343 9-30 (516)
370 1ojt_A Surface protein; redox- 49.5 9.9 0.00034 40.2 3.5 33 322-366 7-39 (482)
371 1gdh_A D-glycerate dehydrogena 49.4 15 0.00052 37.5 4.7 124 286-443 90-239 (320)
372 2qa2_A CABE, polyketide oxygen 49.2 10 0.00035 40.7 3.6 32 322-365 13-44 (499)
373 5mdh_A Malate dehydrogenase; o 49.1 3.8 0.00013 42.4 0.2 120 322-459 4-143 (333)
374 3uko_A Alcohol dehydrogenase c 49.0 19 0.00066 36.7 5.5 32 322-364 195-226 (378)
375 3e1t_A Halogenase; flavoprotei 48.8 8.2 0.00028 41.2 2.7 33 322-366 8-40 (512)
376 2bi7_A UDP-galactopyranose mut 48.8 11 0.00036 39.0 3.5 33 322-366 4-36 (384)
377 1rp0_A ARA6, thiazole biosynth 48.8 8.8 0.0003 37.7 2.8 36 322-368 40-75 (284)
378 4fk1_A Putative thioredoxin re 48.7 10 0.00034 37.1 3.2 32 322-365 7-38 (304)
379 1o94_A Tmadh, trimethylamine d 48.7 10 0.00035 42.8 3.7 33 322-366 390-422 (729)
380 1cjc_A Protein (adrenodoxin re 48.4 12 0.00039 39.9 3.8 34 322-365 7-40 (460)
381 2qa1_A PGAE, polyketide oxygen 48.3 10 0.00036 40.6 3.5 32 322-365 12-43 (500)
382 3nyc_A D-arginine dehydrogenas 48.2 7.2 0.00025 38.7 2.0 32 322-366 10-41 (381)
383 2cdc_A Glucose dehydrogenase g 47.9 30 0.001 35.1 6.7 33 321-365 181-213 (366)
384 3grf_A Ornithine carbamoyltran 47.8 44 0.0015 34.7 7.9 133 259-412 96-240 (328)
385 2rgh_A Alpha-glycerophosphate 47.8 9.8 0.00034 41.7 3.2 33 322-366 33-65 (571)
386 4gde_A UDP-galactopyranose mut 47.7 17 0.00059 37.8 4.9 21 322-342 11-31 (513)
387 3d6n_B Aspartate carbamoyltran 47.6 1.5E+02 0.0051 30.2 11.7 125 259-416 85-215 (291)
388 4gbj_A 6-phosphogluconate dehy 47.3 7.1 0.00024 39.3 1.9 31 322-364 6-36 (297)
389 2pyx_A Tryptophan halogenase; 47.3 10 0.00034 40.7 3.1 38 322-366 8-52 (526)
390 2i0z_A NAD(FAD)-utilizing dehy 47.3 9.9 0.00034 39.9 3.0 34 322-367 27-60 (447)
391 3dk9_A Grase, GR, glutathione 47.2 10 0.00035 39.9 3.1 32 322-365 21-52 (478)
392 1s3e_A Amine oxidase [flavin-c 47.1 11 0.00037 40.0 3.4 33 322-366 5-37 (520)
393 3qvo_A NMRA family protein; st 47.1 21 0.00071 33.6 5.0 99 322-442 24-125 (236)
394 3k6j_A Protein F01G10.3, confi 47.0 11 0.00038 40.9 3.4 36 483-518 232-267 (460)
395 3abi_A Putative uncharacterize 46.9 16 0.00055 37.4 4.5 92 322-443 17-109 (365)
396 3ek2_A Enoyl-(acyl-carrier-pro 46.9 9.4 0.00032 36.4 2.6 36 318-365 11-49 (271)
397 3da1_A Glycerol-3-phosphate de 46.8 9.3 0.00032 41.7 2.8 32 322-365 19-50 (561)
398 3l4b_C TRKA K+ channel protien 46.7 11 0.00036 35.5 2.9 31 323-365 2-32 (218)
399 3slg_A PBGP3 protein; structur 46.6 45 0.0015 33.2 7.6 101 319-442 22-141 (372)
400 3lad_A Dihydrolipoamide dehydr 46.6 13 0.00044 39.1 3.8 32 322-365 4-35 (476)
401 4b7c_A Probable oxidoreductase 46.5 25 0.00086 35.0 5.8 51 299-364 131-182 (336)
402 3ps9_A TRNA 5-methylaminomethy 46.5 11 0.00039 41.7 3.5 33 322-366 273-305 (676)
403 2r0c_A REBC; flavin adenine di 46.4 11 0.00037 40.9 3.3 33 322-366 27-59 (549)
404 2iid_A L-amino-acid oxidase; f 46.3 15 0.00051 38.5 4.2 32 322-365 34-65 (498)
405 4dgk_A Phytoene dehydrogenase; 46.0 9.9 0.00034 39.8 2.8 22 322-343 2-23 (501)
406 2dph_A Formaldehyde dismutase; 45.9 31 0.001 35.6 6.5 48 302-364 171-218 (398)
407 3i6i_A Putative leucoanthocyan 45.9 16 0.00056 36.3 4.3 99 322-439 11-117 (346)
408 2pzm_A Putative nucleotide sug 45.9 22 0.00074 35.1 5.1 107 316-442 15-136 (330)
409 1f8f_A Benzyl alcohol dehydrog 45.8 29 0.001 35.2 6.3 32 322-364 192-223 (371)
410 2gqf_A Hypothetical protein HI 45.8 10 0.00035 39.5 2.8 34 322-367 5-38 (401)
411 3dhn_A NAD-dependent epimerase 45.8 23 0.00078 32.6 5.0 95 322-440 5-110 (227)
412 2b9w_A Putative aminooxidase; 45.7 12 0.00041 38.2 3.3 34 322-366 7-40 (424)
413 1v0j_A UDP-galactopyranose mut 45.6 13 0.00046 38.4 3.7 34 322-366 8-41 (399)
414 3pvc_A TRNA 5-methylaminomethy 45.3 9.8 0.00033 42.4 2.8 33 322-366 265-297 (689)
415 2yg5_A Putrescine oxidase; oxi 45.3 13 0.00044 38.3 3.5 32 322-365 6-37 (453)
416 2ivd_A PPO, PPOX, protoporphyr 45.3 9.7 0.00033 39.6 2.6 32 322-365 17-48 (478)
417 1kyq_A Met8P, siroheme biosynt 45.0 9 0.00031 38.8 2.2 35 319-365 11-45 (274)
418 2nu8_A Succinyl-COA ligase [AD 44.9 55 0.0019 32.8 8.0 79 321-430 7-86 (288)
419 1ps9_A 2,4-dienoyl-COA reducta 44.9 12 0.0004 41.7 3.3 33 322-366 374-406 (671)
420 3atr_A Conserved archaeal prot 44.7 6.4 0.00022 41.2 1.1 34 322-367 7-40 (453)
421 2vns_A Metalloreductase steap3 44.7 13 0.00044 35.2 3.2 91 322-446 29-119 (215)
422 3e48_A Putative nucleoside-dip 44.6 22 0.00076 34.1 4.9 98 323-442 2-106 (289)
423 2yy7_A L-threonine dehydrogena 44.5 17 0.0006 35.0 4.1 99 322-441 3-117 (312)
424 1xhc_A NADH oxidase /nitrite r 44.4 13 0.00046 37.9 3.4 35 321-368 8-42 (367)
425 2vvm_A Monoamine oxidase N; FA 44.2 14 0.00046 38.8 3.5 32 322-365 40-71 (495)
426 1zcj_A Peroxisomal bifunctiona 44.2 11 0.00038 40.3 2.9 32 322-365 38-69 (463)
427 1p0f_A NADP-dependent alcohol 44.1 29 0.00099 35.3 5.9 32 322-364 193-224 (373)
428 2fzw_A Alcohol dehydrogenase c 44.1 29 0.00099 35.2 5.9 32 322-364 192-223 (373)
429 1kol_A Formaldehyde dehydrogen 44.1 29 0.001 35.6 6.0 48 302-364 171-218 (398)
430 4dna_A Probable glutathione re 44.0 12 0.00041 39.3 3.0 32 322-365 6-37 (463)
431 2wpf_A Trypanothione reductase 44.0 15 0.0005 39.3 3.8 31 322-363 8-38 (495)
432 1n2s_A DTDP-4-, DTDP-glucose o 44.0 18 0.00062 34.7 4.2 86 323-442 2-104 (299)
433 2cf5_A Atccad5, CAD, cinnamyl 43.8 35 0.0012 34.6 6.4 46 304-364 167-212 (357)
434 1zej_A HBD-9, 3-hydroxyacyl-CO 43.7 14 0.00048 37.5 3.4 32 321-365 12-43 (293)
435 1gte_A Dihydropyrimidine dehyd 43.5 12 0.00041 44.1 3.2 33 322-365 188-220 (1025)
436 3g17_A Similar to 2-dehydropan 43.5 12 0.00042 37.0 2.9 100 322-449 3-103 (294)
437 1fec_A Trypanothione reductase 43.4 16 0.00056 38.8 4.1 31 322-363 4-34 (490)
438 2j3h_A NADP-dependent oxidored 43.3 24 0.00084 35.2 5.1 50 300-364 138-188 (345)
439 3lup_A DEGV family protein; PS 43.3 6.9 0.00024 39.6 1.0 134 172-357 4-149 (285)
440 2v3a_A Rubredoxin reductase; a 43.2 11 0.00038 38.3 2.6 34 322-365 5-38 (384)
441 4fs3_A Enoyl-[acyl-carrier-pro 42.9 17 0.00057 35.3 3.7 35 319-365 4-41 (256)
442 1yqg_A Pyrroline-5-carboxylate 42.9 16 0.00056 34.9 3.6 32 323-365 2-33 (263)
443 1qor_A Quinone oxidoreductase; 42.9 33 0.0011 34.0 6.0 51 300-365 123-174 (327)
444 3ip1_A Alcohol dehydrogenase, 42.8 27 0.00093 36.1 5.5 32 322-364 215-246 (404)
445 3hdq_A UDP-galactopyranose mut 42.5 16 0.00054 38.6 3.7 33 322-366 30-62 (397)
446 2h6e_A ADH-4, D-arabinose 1-de 42.2 35 0.0012 34.2 6.1 32 305-340 155-190 (344)
447 3euw_A MYO-inositol dehydrogen 42.0 54 0.0018 32.8 7.4 90 322-439 5-94 (344)
448 2q1w_A Putative nucleotide sug 41.8 43 0.0015 33.0 6.6 104 319-442 19-137 (333)
449 3vtz_A Glucose 1-dehydrogenase 41.8 84 0.0029 30.3 8.6 75 319-416 12-91 (269)
450 1h2b_A Alcohol dehydrogenase; 41.6 34 0.0012 34.6 6.0 45 304-364 172-219 (359)
451 3o38_A Short chain dehydrogena 41.5 16 0.00056 34.9 3.4 36 318-365 19-56 (266)
452 3nks_A Protoporphyrinogen oxid 41.4 14 0.0005 38.1 3.2 35 322-366 3-37 (477)
453 2zb4_A Prostaglandin reductase 41.3 32 0.0011 34.7 5.6 57 296-365 137-195 (357)
454 1v3u_A Leukotriene B4 12- hydr 41.1 30 0.001 34.5 5.3 55 296-365 124-179 (333)
455 3klj_A NAD(FAD)-dependent dehy 41.0 13 0.00045 38.4 2.8 35 322-368 10-44 (385)
456 2gjc_A Thiazole biosynthetic e 40.9 18 0.00061 37.4 3.7 37 322-368 66-102 (326)
457 2gmh_A Electron transfer flavo 40.8 27 0.00092 38.3 5.3 37 322-366 36-74 (584)
458 1e3i_A Alcohol dehydrogenase, 40.4 30 0.001 35.2 5.3 32 322-364 197-228 (376)
459 1tt7_A YHFP; alcohol dehydroge 40.4 46 0.0016 33.0 6.6 32 322-365 152-184 (330)
460 1zq6_A Otcase, ornithine carba 40.2 1.2E+02 0.0041 31.9 9.9 139 253-415 116-274 (359)
461 4eye_A Probable oxidoreductase 40.1 23 0.0008 35.7 4.4 49 301-364 143-192 (342)
462 1y56_A Hypothetical protein PH 39.9 8 0.00027 41.3 1.0 32 322-366 109-140 (493)
463 2bcg_G Secretory pathway GDP d 39.9 15 0.00052 38.6 3.1 35 322-368 12-46 (453)
464 1qsg_A Enoyl-[acyl-carrier-pro 39.9 14 0.00049 35.4 2.7 34 320-365 8-44 (265)
465 3mog_A Probable 3-hydroxybutyr 39.9 15 0.0005 39.9 3.0 32 322-365 6-37 (483)
466 3eag_A UDP-N-acetylmuramate:L- 39.9 17 0.00059 36.8 3.3 32 322-365 5-37 (326)
467 3ic9_A Dihydrolipoamide dehydr 39.8 14 0.00046 39.5 2.7 32 322-365 9-40 (492)
468 1qo8_A Flavocytochrome C3 fuma 39.7 20 0.00068 38.9 4.0 35 322-368 122-156 (566)
469 2x8g_A Thioredoxin glutathione 39.7 16 0.00056 39.7 3.4 31 322-364 108-138 (598)
470 1i8t_A UDP-galactopyranose mut 39.6 13 0.00046 38.0 2.5 32 322-365 2-33 (367)
471 1pjq_A CYSG, siroheme synthase 39.5 19 0.00065 38.5 3.8 25 319-343 10-34 (457)
472 2jhf_A Alcohol dehydrogenase E 39.5 32 0.0011 35.0 5.4 32 322-364 193-224 (374)
473 1pj5_A N,N-dimethylglycine oxi 39.5 16 0.00054 41.7 3.3 35 322-367 5-39 (830)
474 3enk_A UDP-glucose 4-epimerase 39.4 27 0.00092 34.2 4.6 102 322-442 6-129 (341)
475 4gut_A Lysine-specific histone 39.4 22 0.00074 40.9 4.4 34 322-367 337-370 (776)
476 3nlc_A Uncharacterized protein 39.2 11 0.00039 41.5 2.0 32 322-365 108-139 (549)
477 1pn0_A Phenol 2-monooxygenase; 39.1 16 0.00055 40.8 3.3 38 322-366 9-46 (665)
478 3dqp_A Oxidoreductase YLBE; al 39.1 31 0.0011 31.8 4.7 93 323-440 2-104 (219)
479 1iz0_A Quinone oxidoreductase; 38.7 46 0.0016 32.6 6.2 48 301-364 110-158 (302)
480 1y0p_A Fumarate reductase flav 38.7 18 0.0006 39.3 3.4 35 322-368 127-161 (571)
481 1jay_A Coenzyme F420H2:NADP+ o 38.7 17 0.0006 33.5 3.0 96 323-446 2-101 (212)
482 4b8w_A GDP-L-fucose synthase; 38.6 48 0.0016 31.5 6.1 46 396-442 51-113 (319)
483 2f1k_A Prephenate dehydrogenas 38.5 19 0.00065 34.8 3.3 31 323-365 2-32 (279)
484 3fmw_A Oxygenase; mithramycin, 38.4 16 0.00054 40.1 3.0 32 322-365 50-81 (570)
485 3cmm_A Ubiquitin-activating en 38.4 19 0.00065 42.8 3.9 39 321-365 425-463 (1015)
486 2x5o_A UDP-N-acetylmuramoylala 38.3 13 0.00044 39.3 2.2 35 320-366 4-38 (439)
487 1cdo_A Alcohol dehydrogenase; 38.3 34 0.0012 34.7 5.4 32 322-364 194-225 (374)
488 2qyt_A 2-dehydropantoate 2-red 38.2 20 0.00067 35.1 3.4 111 322-446 9-121 (317)
489 2dkh_A 3-hydroxybenzoate hydro 38.2 13 0.00044 41.2 2.3 33 322-365 33-65 (639)
490 1piw_A Hypothetical zinc-type 38.1 47 0.0016 33.6 6.3 46 303-364 166-211 (360)
491 1yb5_A Quinone oxidoreductase; 37.8 44 0.0015 33.8 6.1 50 300-364 153-203 (351)
492 1xa0_A Putative NADPH dependen 37.3 42 0.0014 33.3 5.7 31 322-364 151-182 (328)
493 3ec7_A Putative dehydrogenase; 37.2 18 0.00062 36.9 3.1 97 318-439 20-116 (357)
494 3oqb_A Oxidoreductase; structu 37.2 1.1E+02 0.0037 31.1 8.9 41 395-439 72-112 (383)
495 2x4g_A Nucleoside-diphosphate- 36.8 45 0.0015 32.5 5.8 98 322-442 14-126 (342)
496 2zxi_A TRNA uridine 5-carboxym 36.8 12 0.00043 42.2 1.9 32 322-365 28-59 (637)
497 3two_A Mannitol dehydrogenase; 36.6 42 0.0014 33.7 5.6 44 305-364 165-208 (348)
498 3ego_A Probable 2-dehydropanto 36.6 20 0.00069 35.9 3.2 31 322-365 3-33 (307)
499 1sez_A Protoporphyrinogen oxid 36.6 17 0.00059 38.0 2.8 21 322-342 14-34 (504)
500 3goh_A Alcohol dehydrogenase, 36.5 53 0.0018 32.4 6.3 49 300-364 126-174 (315)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=7.6e-202 Score=1628.17 Aligned_cols=538 Identities=41% Similarity=0.771 Sum_probs=524.0
Q ss_pred CccccccCCCCCcCCCCChHHhhccCCCCCCCCccccHHHHHHHHHHHHhccccccCCCCCCCCchhHHHHHHHhhcccc
Q 007499 31 RGTDILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNE 110 (601)
Q Consensus 31 ~G~~ll~~p~~NKgtaFt~~ER~~l~l~GLlPp~v~tle~Q~~R~~~~~~~~~~~~~~~~~~~~~l~k~~~L~~L~~~Ne 110 (601)
+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++ ++|+||+||++||++||
T Consensus 2 ~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~----------~~l~k~~~L~~L~~~Ne 71 (555)
T 1gq2_A 2 KGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLT----------SDLDRYILLMSLQDRNE 71 (555)
T ss_dssp CTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCC----------CHHHHHHHHHHHHHHCH
T ss_pred ChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCC----------CcHHHHHHHHHhcCcce
Confidence 69999999999999999999999999999999999999999999999999999 89999999999999999
Q ss_pred eeeeeeeccCcccccceeeccchHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCccccccCCCC
Q 007499 111 TLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLG 190 (601)
Q Consensus 111 ~Lfy~ll~~~~~e~lpiiYTPtVg~ac~~~s~~~r~prGlyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 190 (601)
+||||++++|++|+|||+||||||++|++||++||+|||||||++|+|+++++++|||.++|++||||||||||||||||
T Consensus 72 ~Lfy~ll~~~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G 151 (555)
T 1gq2_A 72 KLFYKVLTSDIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLG 151 (555)
T ss_dssp HHHHHHHHHTHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCG
T ss_pred eeehhhHhhhHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccchhhhHHHhhcCCCCCceecEEeeccCCchhcccCccccccccCCCChhhhhHhHHHHHHHHHHhC-CCeE--
Q 007499 191 VQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARW-PKAI-- 267 (601)
Q Consensus 191 ~~Gm~I~iGKl~LY~a~gGI~P~~~lPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~-P~~l-- 267 (601)
++||||||||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+.+| |+++
T Consensus 152 ~~g~~ipvGKl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~ 231 (555)
T 1gq2_A 152 CYGMGIPVGKLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQ 231 (555)
T ss_dssp GGGGHHHHHHHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred CCccccchhHHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 8886
Q ss_pred EeeCCCChHHHHHHHHhccCCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHh
Q 007499 268 FEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARM 347 (601)
Q Consensus 268 ~EDf~~~~Af~iL~ryr~~~~~FnDDiQGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~ 347 (601)
||||+++|||+||+|||+++|||||||||||+|+||||+||+|++|++|+| |||||+|||+||+|||+||+++|+ +
T Consensus 232 ~EDf~~~~af~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d---~riv~~GAGaAg~gia~ll~~~~~-~ 307 (555)
T 1gq2_A 232 FEDFANANAFRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSD---HTVLFQGAGEAALGIANLIVMAMQ-K 307 (555)
T ss_dssp ECSCCHHHHHHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGG---CCEEEECCSHHHHHHHHHHHHHHH-H
T ss_pred ecccCCccHHHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhh---cEEEEECCCHHHHHHHHHHHHHHH-H
Confidence 999999999999999999999999999999999999999999999999999 999999999999999999999999 6
Q ss_pred cCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHH
Q 007499 348 AGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKA 427 (601)
Q Consensus 348 ~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~ 427 (601)
+|+|+|||++||||||++|||+++|++|+++|++||++.++ ..+|+|||+.+|||||||+|++||+||+||||+
T Consensus 308 ~G~~~eeA~~~i~~~D~~Gli~~~r~~l~~~k~~~A~~~~~------~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~ 381 (555)
T 1gq2_A 308 EGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFAHEHCE------MKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQD 381 (555)
T ss_dssp HTCCHHHHHTTEEEEETTEECBTTCSSCCTTGGGGCBSCCC------CCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHH
T ss_pred cCCChHHHhCcEEEEECCCeeeCCCCCchHHHHHHHhhcCC------CCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHH
Confidence 79999999999999999999999998999999999998642 368999999999999999999999999999999
Q ss_pred hhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCceecCCCeeeecccccccccchhhHHHHHHcCCcc
Q 007499 428 MRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARF 507 (601)
Q Consensus 428 Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai~AsGSPf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~ 507 (601)
|++ +|+|||||||||||++|||+||||++||+|+|||||||||+||+|++||+++||||||+|+|||||||+++++|++
T Consensus 382 Ma~-~~~~PIIFaLSNPt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~liFPGi~~Gal~~~A~~ 460 (555)
T 1gq2_A 382 MAA-FNKRPIIFALSNPTSKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKH 460 (555)
T ss_dssp HHH-HCSSCEEEECCSSGGGCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHHTCSS
T ss_pred HHh-cCCCCEEEECCCCCCccCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEeccccccceeeccchhhhhHhcCCeE
Confidence 975 9999999999999999999999999999999999999999999996699999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCccccCCCCcchhhHHHHHHHHHHHHHcCccCCCCCCCCCcCCCCCHHHHHHHHHh
Q 007499 508 ITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAEGHGEVGPRDLKHMSKEETVEYVTR 587 (601)
Q Consensus 508 itd~m~~aAA~aLA~~v~~~~l~~g~l~P~l~~ireVs~~VA~aVa~~A~~~G~A~~~~~~~~~~~~~~~~~dl~~~i~~ 587 (601)
|||+|+++||+|||+++++++++.+.|||+++++|+||.+||.||+++|+++|+|+. ...++|+++||++
T Consensus 461 Itd~M~~aAA~alA~~v~~~~~~~~~i~P~~~~ir~vs~~VA~aVa~~A~~~GvA~~----------~~~~~d~~~~i~~ 530 (555)
T 1gq2_A 461 IGDDVFLTTAEVIAQEVSEENLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTAST----------YPQPEDLEAFIRS 530 (555)
T ss_dssp CCHHHHHHHHHHHHHTCCHHHHHHTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCC----------SSCCSSHHHHHHT
T ss_pred CCHHHHHHHHHHHHhccccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCC----------CCChHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999972 1225789999999
Q ss_pred CCccCCCCCCcc
Q 007499 588 SMWFPIYSPLVH 599 (601)
Q Consensus 588 ~mw~P~Y~~~v~ 599 (601)
+||+|+|+|++.
T Consensus 531 ~~~~P~Y~~~~~ 542 (555)
T 1gq2_A 531 QVYSTDYNCFVA 542 (555)
T ss_dssp TSCCCSCCCCSC
T ss_pred hccCCCCCCccc
Confidence 999999999864
No 2
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=8.9e-201 Score=1627.88 Aligned_cols=545 Identities=42% Similarity=0.767 Sum_probs=528.4
Q ss_pred CCceeeccCccccccCCCCCcCCCCChHHhhccCCCCCCCCccccHHHHHHHHHHHHhccccccCCCCCCCCchhHHHHH
Q 007499 23 PGPCMVHKRGTDILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRIL 102 (601)
Q Consensus 23 ~~~~~~~~~G~~ll~~p~~NKgtaFt~~ER~~l~l~GLlPp~v~tle~Q~~R~~~~~~~~~~~~~~~~~~~~~l~k~~~L 102 (601)
..++.+..+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++ ++|+||+||
T Consensus 30 ~~~~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~----------~~l~k~~~L 99 (605)
T 1o0s_A 30 PERVTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQP----------NDLARYIQL 99 (605)
T ss_dssp CCCCCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSS----------SHHHHHHHH
T ss_pred CCccccCcchHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHcCC----------CcHHHHHHH
Confidence 3345567899999999999999999999999999999999999999999999999999999 899999999
Q ss_pred HHhhcccceeeeeeeccCcccccceeeccchHHHHHHHhhcccCCCccccccCCh--hhHHHHHhcCCCCCeeEEEEecC
Q 007499 103 NRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDK--GEMMSMIYNWPAQQVDMIVLTDG 180 (601)
Q Consensus 103 ~~L~~~Ne~Lfy~ll~~~~~e~lpiiYTPtVg~ac~~~s~~~r~prGlyis~~d~--g~i~~~l~nwp~~~v~viVVTDG 180 (601)
++||++||+||||++++|++|+|||+||||||++|++||++||+|||+|||++|+ |+++++++|||.++|++||||||
T Consensus 100 ~~L~~~Ne~Lfyrll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG 179 (605)
T 1o0s_A 100 DGLQDRNEKLFYRVVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDG 179 (605)
T ss_dssp HHHHHHCHHHHHHHHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECS
T ss_pred HHhhcccchhhhhhhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEcc
Confidence 9999999999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred ccccccCCCCCccccccchhhhHHHhhcCCCCCceecEEeeccCCchhcccCccccccccCCCChhhhhHhHHHHHHHHH
Q 007499 181 SRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVH 260 (601)
Q Consensus 181 ~rILGLGDlG~~Gm~I~iGKl~LY~a~gGI~P~~~lPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~ 260 (601)
||||||||||++||||||||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+
T Consensus 180 ~~ILGLGD~G~~g~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~ 259 (605)
T 1o0s_A 180 ERILGLGDLGAYGIGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACT 259 (605)
T ss_dssp SCBTTTBCCGGGGGHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHH
T ss_pred ccceecCCCCCCcCcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhC-CCeE--EeeCCCChHHHHHHHHhccCCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHH
Q 007499 261 ARW-PKAI--FEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVL 337 (601)
Q Consensus 261 ~~~-P~~l--~EDf~~~~Af~iL~ryr~~~~~FnDDiQGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA 337 (601)
.+| |+++ ||||+++|||+||+|||+++|||||||||||+|+|||||||+|++|++|+| |||||+|||+||+|||
T Consensus 260 ~~fGp~~~I~~EDf~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d---~riv~~GAGaAgigia 336 (605)
T 1o0s_A 260 KKYGQKTLIQFEDFANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQ---EKYLFFGAGAASTGIA 336 (605)
T ss_dssp HHHCTTCEEEECSCCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGG---CCEEEECCSHHHHHHH
T ss_pred HHhCCCcEeeHhhcCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhh---cEEEEECCCHHHHHHH
Confidence 999 8886 999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecCCC
Q 007499 338 KMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVG 417 (601)
Q Consensus 338 ~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~ 417 (601)
+||+++|+ ++|+|+|||++||||||++|||+++|++|+++|++||++.++ ..+|+|||+.+|||||||+|++|
T Consensus 337 ~ll~~~m~-~~Gl~~eeA~~~i~~vD~~Gli~~~r~~l~~~k~~~A~~~~~------~~~L~eav~~vkpdVlIG~S~~~ 409 (605)
T 1o0s_A 337 EMIVHQMQ-NEGISKEEACNRIYLMDIDGLVTKNRKEMNPRHVQFAKDMPE------TTSILEVIRAARPGALIGASTVR 409 (605)
T ss_dssp HHHHHHHH-TTTCCHHHHHHTEEEEETTEECBTTCSSCCGGGTTTCBSSCC------CCCHHHHHHHHCCSEEEECSSCT
T ss_pred HHHHHHHH-HcCCChhhhhCeEEEEECCCceeCCCCCchHHHHHHHhhcCC------CCCHHHHHhhcCCCEEEEecCCC
Confidence 99999999 789999999999999999999999998999999999998642 36899999999999999999999
Q ss_pred CCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCceecCCCeeeecccccccccchhhH
Q 007499 418 GVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIG 497 (601)
Q Consensus 418 g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai~AsGSPf~pv~~~~G~~~~p~Q~NN~~iFPGig 497 (601)
|+||+||||+|++ +|+|||||||||||++|||+||||++||+|+|||||||||+||+|+ ||+++||||||+|+|||||
T Consensus 410 g~ft~evv~~Ma~-~~~~PIIFaLSNPt~~aE~~pe~a~~~t~G~aivATGspF~pV~~~-Grs~~pnQ~NN~liFPGi~ 487 (605)
T 1o0s_A 410 GAFNEEVIRAMAE-INERPIIFALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELN-GHTYKPGQGNNAYIFPGVA 487 (605)
T ss_dssp TCSCHHHHHHHHH-HCSSCEEEECCSSGGGCSSCHHHHHHTTTSCCEEEESSCCCCEEET-TEEECCEECCGGGTHHHHH
T ss_pred CCCCHHHHHHHHh-cCCCCEEEECCCCCCCcCcCHHHHHhhccCCEEEEECCCCCCeeEC-CEEeccccccceeeccchh
Confidence 9999999999975 9999999999999999999999999999999999999999999995 9999999999999999999
Q ss_pred HHHHHcCCcccCHHHHHHHHHHHhccCCCCCCCCCccccCCCCcchhhHHHHHHHHHHHHHcCccCCCCCCCCCcCCCCC
Q 007499 498 LGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAEGHGEVGPRDLKHMS 577 (601)
Q Consensus 498 lG~l~~~a~~itd~m~~aAA~aLA~~v~~~~l~~g~l~P~l~~ireVs~~VA~aVa~~A~~~G~A~~~~~~~~~~~~~~~ 577 (601)
||+++++|++|||+|+++||+|||+++++++++.+.|||+++++|+||.+||.||+++|+++|+|+. ...
T Consensus 488 lGal~~~A~~Itd~M~~aAA~aLA~~v~~~~~~~~~i~P~~~dir~vs~~VA~AVa~~A~~~GvA~~----------~~~ 557 (605)
T 1o0s_A 488 LGTILFQIRHVDNDLFLLAAKKVASCVTEDSLKVGRVYPQLKEIREISIQIAVEMAKYCYKNGTANL----------YPQ 557 (605)
T ss_dssp HHHHHHTBSCCCHHHHHHHHHHHHHTCCHHHHTTTCCSCCGGGHHHHHHHHHHHHHHHHHHTTCBCS----------SSC
T ss_pred hhhhhcCCeEcCHHHHHHHHHHHHhhcccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCC----------CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999972 123
Q ss_pred HHHHHHHHHhCCccCCCCCCcc
Q 007499 578 KEETVEYVTRSMWFPIYSPLVH 599 (601)
Q Consensus 578 ~~dl~~~i~~~mw~P~Y~~~v~ 599 (601)
++|+++||+++||+|+|++++.
T Consensus 558 ~~d~~~~i~~~~w~P~Y~~~~~ 579 (605)
T 1o0s_A 558 PEDLEKYVRAQVYNTEYEELIN 579 (605)
T ss_dssp CSCHHHHHHHHSCCCSCCCCSC
T ss_pred hHHHHHHHHHhccCCCCCcccc
Confidence 5789999999999999999864
No 3
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=1.4e-200 Score=1622.50 Aligned_cols=541 Identities=40% Similarity=0.764 Sum_probs=525.4
Q ss_pred cCccccccCCCCCcCCCCChHHhhccCCCCCCCCccccHHHHHHHHHHHHhccccccCCCCCCCCchhHHHHHHHhhccc
Q 007499 30 KRGTDILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRN 109 (601)
Q Consensus 30 ~~G~~ll~~p~~NKgtaFt~~ER~~l~l~GLlPp~v~tle~Q~~R~~~~~~~~~~~~~~~~~~~~~l~k~~~L~~L~~~N 109 (601)
.+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++ ++|+||+||++||++|
T Consensus 3 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~----------~~l~k~~~L~~L~~~N 72 (564)
T 1pj3_A 3 EKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMT----------SPLEKYIYIMGIQERN 72 (564)
T ss_dssp CCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCC----------SHHHHHHHHHHHHTTC
T ss_pred CchHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCC----------CcHHHHHHHHHhhccc
Confidence 589999999999999999999999999999999999999999999999999999 8999999999999999
Q ss_pred ceeeeeeeccCcccccceeeccchHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCccccccCCC
Q 007499 110 ETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDL 189 (601)
Q Consensus 110 e~Lfy~ll~~~~~e~lpiiYTPtVg~ac~~~s~~~r~prGlyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDl 189 (601)
|+||||++++|++|+|||+||||||++|++||++||+|||+|||++|+|+|+++|+|||.++|++|||||||||||||||
T Consensus 73 e~Lfy~ll~~~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD~ 152 (564)
T 1pj3_A 73 EKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDL 152 (564)
T ss_dssp HHHHHHHHHHCHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCCC
T ss_pred ceeehhhhhhCHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccchhhhHHHhhcCCCCCceecEEeeccCCchhcccCccccccccCCCChhhhhHhHHHHHHHHHHhC-CCeE-
Q 007499 190 GVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARW-PKAI- 267 (601)
Q Consensus 190 G~~Gm~I~iGKl~LY~a~gGI~P~~~lPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~-P~~l- 267 (601)
|++||+|||||++|||+||||||++|||||||+||||++||+||+||||||+|++|++||+|+||||++|+++| |+++
T Consensus 153 G~~gm~ipvGKl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I 232 (564)
T 1pj3_A 153 GVYGMGIPVGKLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLI 232 (564)
T ss_dssp GGGGGHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred CCCcccceehHHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 8886
Q ss_pred -EeeCCCChHHHHHHHHhccCCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHH
Q 007499 268 -FEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAAR 346 (601)
Q Consensus 268 -~EDf~~~~Af~iL~ryr~~~~~FnDDiQGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~ 346 (601)
||||+++|||+||+|||+++|||||||||||+|+|||||||+|++|++|+| |||||+|||+||+|||+||+++|+
T Consensus 233 ~~EDf~~~~af~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d---~riv~~GAGaAgigia~ll~~~m~- 308 (564)
T 1pj3_A 233 QFEDFGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISE---HKILFLGAGEAALGIANLIVMSMV- 308 (564)
T ss_dssp EECSCCHHHHHHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGG---CCEEEECCSHHHHHHHHHHHHHHH-
T ss_pred eehhcCCccHHHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhH---cEEEEeCCCHHHHHHHHHHHHHHH-
Confidence 999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred hcCCChhhhcCeEEEEecCccccCCC-CCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHH
Q 007499 347 MAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVL 425 (601)
Q Consensus 347 ~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv 425 (601)
++|+|+|||++||||||++|||+++| ++|+++|++||++.+++ ...+|+|||+.+|||||||+|++||+||+|||
T Consensus 309 ~~Gl~~eeA~~~i~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~----~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv 384 (564)
T 1pj3_A 309 ENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPES----IPDTFEDAVNILKPSTIIGVAGAGRLFTPDVI 384 (564)
T ss_dssp HTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTGGGCBCCCSS----CCSSHHHHHHHHCCSEEEECCCSSCCSCHHHH
T ss_pred HcCCChHHhhCcEEEEeCCCeEECCCcccchHHHHHHHHhcCcc----ccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHH
Confidence 68999999999999999999999999 78999999999986542 13689999999999999999999999999999
Q ss_pred HHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCceecCCCeeeecccccccccchhhHHHHHHcCC
Q 007499 426 KAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGA 505 (601)
Q Consensus 426 ~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai~AsGSPf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a 505 (601)
|+|++ +|+|||||||||||++|||+||||++||+|+|||||||||+||+|++||+++||||||+|+|||||||+++++|
T Consensus 385 ~~Ma~-~~~~PIIFaLSNPt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~G~~~~pnQ~NN~liFPGi~~Gal~~~A 463 (564)
T 1pj3_A 385 RAMAS-INERPVIFALSNPTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNT 463 (564)
T ss_dssp HHHHH-HCSSCEEEECCSSGGGCSCCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHTTC
T ss_pred HHHHh-cCCCCEEEECCCCCCccCcCHHHHHhhccCCEEEEeCCCCCceeecCCceecccccceeeeccchhhhhHhcCC
Confidence 99975 99999999999999999999999999999999999999999999966999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHhccCCCCCCCCCccccCCCCcchhhHHHHHHHHHHHHHcCccCCCCCCCCCcCCCCCHHHHHHHH
Q 007499 506 RFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAEGHGEVGPRDLKHMSKEETVEYV 585 (601)
Q Consensus 506 ~~itd~m~~aAA~aLA~~v~~~~l~~g~l~P~l~~ireVs~~VA~aVa~~A~~~G~A~~~~~~~~~~~~~~~~~dl~~~i 585 (601)
++|||+|+++||+|||+++++++++.+.|||+++++|+||.+||.||+++|+++|+|+. ...++|+++||
T Consensus 464 ~~Itd~M~~aAA~aLA~~v~~~~~~~~~i~P~~~~~r~vs~~VA~aVa~~A~~~GvA~~----------~~~~~d~~~~i 533 (564)
T 1pj3_A 464 RHISDSVFLEAAKALTSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFR----------YPEPEDKAKYV 533 (564)
T ss_dssp SCCCHHHHHHHHHHHHTTCCHHHHHTTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCC----------SSCCSSHHHHH
T ss_pred eECCHHHHHHHHHHHHhhcccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCC----------CCChHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999972 12357899999
Q ss_pred HhCCccCCCCCCcc
Q 007499 586 TRSMWFPIYSPLVH 599 (601)
Q Consensus 586 ~~~mw~P~Y~~~v~ 599 (601)
+++||+|+|++++.
T Consensus 534 ~~~~~~p~Y~~~~~ 547 (564)
T 1pj3_A 534 KERTWRSEYDSLLP 547 (564)
T ss_dssp HHTCCCCSCCCCCC
T ss_pred HHHhhCCCCCCccc
Confidence 99999999999864
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=2.3e-120 Score=973.44 Aligned_cols=394 Identities=25% Similarity=0.366 Sum_probs=360.5
Q ss_pred hcccceeeeeeeccCcccccceeeccchHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCccccc
Q 007499 106 HDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILG 185 (601)
Q Consensus 106 ~~~Ne~Lfy~ll~~~~~e~lpiiYTPtVg~ac~~~s~~~r~prGlyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILG 185 (601)
..+-++. -++.+++.++ ||++||||||++|++|+ +|++++++++.+| ++||||||||||||
T Consensus 44 ~GKi~v~-~~~~~~~~~d-LslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILG 104 (487)
T 3nv9_A 44 KGKIQIM-PKCTLAGFNW-FNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLG 104 (487)
T ss_dssp TSSEEEE-ECSCCSSGGG-HHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGG
T ss_pred CCeEEEE-ecCCCCCHHH-CeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEEEEEEcCceeee
Confidence 6777765 7888999988 69999999999999998 5889888888877 58999999999999
Q ss_pred cCCCCC-ccccccchhhhHHHhhcCCCCCceecEEeeccCCchhcccCccccccccCCCChhhhhHhHHHHHHHHHHhCC
Q 007499 186 LGDLGV-QGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWP 264 (601)
Q Consensus 186 LGDlG~-~Gm~I~iGKl~LY~a~gGI~P~~~lPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P 264 (601)
|||+|+ +||||||||++|||+||||| |||||||+||+| +++| +||||++|+++||
T Consensus 105 LGDiG~~agmpImeGKl~Lyk~~aGId---~lPI~LD~gt~~--~~~d-------------------~defve~v~~~~P 160 (487)
T 3nv9_A 105 DGDVTPPGGLGVMEGKALLMKYLGGID---AVPICIDSKNKE--GKND-------------------PDAVIEFVQRIQH 160 (487)
T ss_dssp GBCCCGGGGHHHHHHHHHHHHHHHCCE---EEEEECCCBCTT--SCBC-------------------HHHHHHHHHHHGG
T ss_pred ccccccccCCchhhhHHHHHHhcCCCc---eeeeEEeCCCcc--ccCC-------------------HHHHHHHHHHhCC
Confidence 999999 69999999999999999999 999999999866 4677 5999999999999
Q ss_pred Ce--E-EeeCCCChHHHHHHHHhc--cCCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHH
Q 007499 265 KA--I-FEDFQMKWAFETLERYRK--RFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKM 339 (601)
Q Consensus 265 ~~--l-~EDf~~~~Af~iL~ryr~--~~~~FnDDiQGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~l 339 (601)
++ + ||||+++|||+||+|||+ ++|||||||||||+|+||||+||+|++|++|+| |||||+|||+||+|||+|
T Consensus 161 ~fG~InlEDf~ap~af~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d---~riV~~GAGaAGigia~l 237 (487)
T 3nv9_A 161 TFGAINLEDISQPNCYKILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHE---CRMVFIGAGSSNTTCLRL 237 (487)
T ss_dssp GCSEEEECSCCTTHHHHHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGG---CCEEEECCSHHHHHHHHH
T ss_pred CCCeecHhhcCCchHHHHHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhh---cEEEEECCCHHHHHHHHH
Confidence 98 4 999999999999999999 589999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCC-----hhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeec
Q 007499 340 AVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLD-----PAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS 414 (601)
Q Consensus 340 l~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~-----~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S 414 (601)
|+. .|+|+ +|||||||+|||+++|++|+ ++|.+||++.+. ....||+|||+. +|||||+|
T Consensus 238 l~~-----~G~~~----~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~----~~~~~L~eav~~--adVlIG~S 302 (487)
T 3nv9_A 238 IVT-----AGADP----KKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNP----SKFGSIAEACVG--ADVLISLS 302 (487)
T ss_dssp HHH-----TTCCG----GGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCT----TCCCSHHHHHTT--CSEEEECC
T ss_pred HHH-----cCCCc----ccEEEEeccccccCCcchhhhhcccHHHHHHHHhccc----ccCCCHHHHHhc--CCEEEEec
Confidence 974 68886 89999999999999997774 466788886532 145799999999 69999999
Q ss_pred CC-CCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCceecCCCeeeecccccccccc
Q 007499 415 GV-GGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLF 493 (601)
Q Consensus 415 ~~-~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai~AsGSPf~pv~~~~G~~~~p~Q~NN~~iF 493 (601)
++ ||+||+|+||+|+ +|||||||||||+ ||+||||++ +|+|||||| |+++||||||+|+|
T Consensus 303 ~~~pg~ft~e~V~~Ma----~~PIIFaLSNPtp--Ei~pe~A~~--~G~aIvATG-----------rsd~PnQ~NN~liF 363 (487)
T 3nv9_A 303 TPGPGVVKAEWIKSMG----EKPIVFCCANPVP--EIYPYEAKE--AGAYIVATG-----------RGDFPNQVNNSVGF 363 (487)
T ss_dssp CSSCCCCCHHHHHTSC----SSCEEEECCSSSC--SSCHHHHHH--TTCSEEEES-----------CTTSSSBCCGGGTH
T ss_pred ccCCCCCCHHHHHhhc----CCCEEEECCCCCc--cCCHHHHHH--hCCEEEEEC-----------CCCCcccCcceeEc
Confidence 76 8999999999995 7999999999998 999999998 699999995 66789999999999
Q ss_pred hhhHHHHHHcCCcccCHHHHHHHHHHHhccCCCCCCCCCccccCCCCcchhhHHHHHHHHHHHHHcCccCCCCCCCCCcC
Q 007499 494 PGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAEGHGEVGPRDL 573 (601)
Q Consensus 494 PGiglG~l~~~a~~itd~m~~aAA~aLA~~v~~~~l~~g~l~P~l~~ireVs~~VA~aVa~~A~~~G~A~~~~~~~~~~~ 573 (601)
||||||++++||++|||+|+++||++||++++++++..+.|||++++ ++||.+||.||+++|+++|+|+.
T Consensus 364 PGI~~Gal~~~A~~Itd~M~~AAA~ALA~~v~~~~l~~~~i~P~~~d-~~Vs~~VA~AVa~aA~~~GvA~~--------- 433 (487)
T 3nv9_A 364 PGILKGALIVRARKITDNMAIAASRALAEFAEKRGINPDNIIGTMDE-PGIFPKEAADVAMQAIKDGVARV--------- 433 (487)
T ss_dssp HHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHTCCBTTBCSCCTTC-TTHHHHHHHHHHHHHHHHTCCSC---------
T ss_pred chhhHHHHHcCCcccCHHHHHHHHHHHHhhCCcccCCCCceeCCccc-cchHHHHHHHHHHHHHHhCCCCC---------
Confidence 99999999999999999999999999999999999999999999999 57999999999999999999982
Q ss_pred CCCCHHHHHHHHHhCC
Q 007499 574 KHMSKEETVEYVTRSM 589 (601)
Q Consensus 574 ~~~~~~dl~~~i~~~m 589 (601)
...+++++.+++++++
T Consensus 434 ~~~~~~~~~~~~~~~~ 449 (487)
T 3nv9_A 434 TDLTWQQVYDIAEHDI 449 (487)
T ss_dssp CCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 1246788888888764
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=1.6e-111 Score=895.90 Aligned_cols=366 Identities=30% Similarity=0.461 Sum_probs=337.2
Q ss_pred hcccceeeeeeeccCcccccceeeccchHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCccccc
Q 007499 106 HDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILG 185 (601)
Q Consensus 106 ~~~Ne~Lfy~ll~~~~~e~lpiiYTPtVg~ac~~~s~~~r~prGlyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILG 185 (601)
..+-+. ++++.+++.++ |||+||||||++|++|+ +|+++++ +|+.++++|+|||||+||||
T Consensus 19 ~gk~~~-~~~~~~~~~~~-l~i~YtP~V~~~c~~i~-------------~~p~~v~----~~t~~~~~V~VvTdG~~iLG 79 (398)
T 2a9f_A 19 GGKLEV-QPKVDIKTKHD-LSIAYTPGVASVSSAIA-------------KDKTLAY----DLTTKKNTVAVISDGTAVLG 79 (398)
T ss_dssp TSSEEE-EESSCCSSHHH-HHHHSTTTTHHHHHHHH-------------HCGGGHH----HHSGGGTEEEEEECSSSCTT
T ss_pred CCeEEE-EEecccCCHHH-CeEEECchHHHHHHHHH-------------hCHHHHH----HhcccCCEEEEEECCccccC
Confidence 667654 69999999866 79999999999999998 4777776 57778899999999999999
Q ss_pred cCCCCCc-cccccchhhhHHHhhcCCCCCceecEEeeccCCchhcccCccccccccCCCChhhhhHhHHHHHHHHHHhCC
Q 007499 186 LGDLGVQ-GIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWP 264 (601)
Q Consensus 186 LGDlG~~-Gm~I~iGKl~LY~a~gGI~P~~~lPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P 264 (601)
|||+|++ |||||+||+.||++||||| |+|||||+|| +||||++|+++||
T Consensus 80 LGD~G~~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~p 129 (398)
T 2a9f_A 80 LGDIGPEAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALAP 129 (398)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHGG
T ss_pred CCCcccccCCcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcCC
Confidence 9999996 9999999999999999999 9999999985 7999999999999
Q ss_pred Ce--E-EeeCCCChHHHHHHHHhcc--CCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHH
Q 007499 265 KA--I-FEDFQMKWAFETLERYRKR--FCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKM 339 (601)
Q Consensus 265 ~~--l-~EDf~~~~Af~iL~ryr~~--~~~FnDDiQGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~l 339 (601)
.+ + ||||+++|||++|+|||++ +|||||||||||+|+|||++||+|++|++++| +||||+|||+||+|||++
T Consensus 130 ~F~~I~lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d---~kVVi~GAGaAG~~iA~l 206 (398)
T 2a9f_A 130 TFGGINLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDE---VSIVVNGGGSAGLSITRK 206 (398)
T ss_dssp GCSEEEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTS---CEEEEECCSHHHHHHHHH
T ss_pred ceeEeccccCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCc---cEEEEECCCHHHHHHHHH
Confidence 95 4 9999999999999999997 99999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHhcCCChhhhcCeEEEEecCccccCCC-CCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecCCCC
Q 007499 340 AVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGG 418 (601)
Q Consensus 340 l~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g 418 (601)
++.+ |. ++||++|++|||+++| ++|+++|++||++.... ....+|+|+|+. +|+|||+|+ ||
T Consensus 207 l~~~-----Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~---~~~~~L~eav~~--ADV~IG~Sa-pg 269 (398)
T 2a9f_A 207 LLAA-----GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNRE---FKSGTLEDALEG--ADIFIGVSA-PG 269 (398)
T ss_dssp HHHH-----TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCT---TCCCSCSHHHHT--TCSEEECCS-TT
T ss_pred HHHc-----CC------CeEEEEECCCcccCCccccchHHHHHHhhccCcc---cchhhHHHHhcc--CCEEEecCC-CC
Confidence 9975 53 7999999999999999 88999999999975432 235789999999 799999998 99
Q ss_pred CCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCceecCCCeeeecccccccccchhhHH
Q 007499 419 VFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGL 498 (601)
Q Consensus 419 ~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai~AsGSPf~pv~~~~G~~~~p~Q~NN~~iFPGigl 498 (601)
+||+|+|++|+ ++||||||||||+ ||+||||++| |+||||| ||+++|||+||+|+|||||+
T Consensus 270 l~T~EmVk~Ma----~~pIIfalsNPt~--E~~pe~a~~~--g~~i~at-----------Grs~~p~Q~NN~~~FPgi~~ 330 (398)
T 2a9f_A 270 VLKAEWISKMA----ARPVIFAMANPIP--EIYPDEALEA--GAYIVGT-----------GRSDFPNQINNVLAFPGIFR 330 (398)
T ss_dssp CCCHHHHHTSC----SSCEEEECCSSSC--SSCHHHHHTT--TCSEEEE-----------SCTTSSSBCCGGGTHHHHHH
T ss_pred CCCHHHHHhhC----CCCEEEECCCCCc--cCCHHHHHHh--CCeEEEe-----------CCCCCCCcCCceeEcchHHH
Confidence 99999999995 7999999999996 9999999999 9999999 48899999999999999999
Q ss_pred HHHHcCCcccCHHHHHHHHHHHhccCCCCCCCCCccccCCCCcchhhHHHHHHHHHHHHHcC
Q 007499 499 GTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEED 560 (601)
Q Consensus 499 G~l~~~a~~itd~m~~aAA~aLA~~v~~~~l~~g~l~P~l~~ireVs~~VA~aVa~~A~~~G 560 (601)
|++++||++|||+|+++||++||++++++++..++|||++++ ++||.+||.||+++|+++.
T Consensus 331 Gal~~~a~~I~d~m~~aAa~alA~~~~~~~~~~~~i~P~~~~-~~v~~~VA~aVa~~A~~~~ 391 (398)
T 2a9f_A 331 GALDARAKTITVEMQIAAAKGIASLVPDDALSTTNIIPDAFK-EGVAEIVAKSVRSVVLKSE 391 (398)
T ss_dssp HHHHHTCSSCCHHHHHHHHHHHHHTCSSCSSCCSCCSCSSTT-HHHHHHHTTTTCCCCC---
T ss_pred HHHHcCCcCCCHHHHHHHHHHHHhcCCcccCCCCccCCCCCc-chhHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999 8999999999999998643
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=1e-105 Score=850.18 Aligned_cols=360 Identities=27% Similarity=0.408 Sum_probs=333.7
Q ss_pred HhhcccceeeeeeeccCcccccceeeccchHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCccc
Q 007499 104 RLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRI 183 (601)
Q Consensus 104 ~L~~~Ne~Lfy~ll~~~~~e~lpiiYTPtVg~ac~~~s~~~r~prGlyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rI 183 (601)
..+.+-+. ++++.+++.++ |||+||||||++|++|+ +|+++++ +|+.++++|+|||||+||
T Consensus 21 ~~~gk~~~-~~~~~~~~~~~-l~i~YtP~V~~~c~~~~-------------~~p~~v~----~~t~~~~~V~VvTdg~~v 81 (388)
T 1vl6_A 21 FLKGKIRT-ALPVEKVDRET-LSLLYTPGVADVARACA-------------EDPEKTY----VYTSRWNTVAVVSDGSAV 81 (388)
T ss_dssp HHTCSCEE-ECSCSCCCHHH-HHHHSTTTHHHHHHHHH-------------HCGGGHH----HHSGGGGEEEEEECSTTB
T ss_pred cCCCeEEE-EEeeecCCHHH-CeEEECchHHHHHHHHH-------------hCHHHHH----hhcccCCeEEEEECCccc
Confidence 34667654 79999999977 79999999999999998 3666666 577788999999999999
Q ss_pred cccCCCCCc-cccccchhhhHHHhhcCCCCCceecEEeeccCCchhcccCccccccccCCCChhhhhHhHHHHHHHHHHh
Q 007499 184 LGLGDLGVQ-GIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHAR 262 (601)
Q Consensus 184 LGLGDlG~~-Gm~I~iGKl~LY~a~gGI~P~~~lPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~ 262 (601)
|||||+|++ |||||+||+.||++||||| ++|||||+|| +||||++|+++
T Consensus 82 LGlGD~G~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~ 131 (388)
T 1vl6_A 82 LGLGNIGPYGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSL 131 (388)
T ss_dssp TTTBSCCHHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHT
T ss_pred cCCCccccccCCcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHc
Confidence 999999996 9999999999999999999 9999999985 79999999999
Q ss_pred CCCe--E-EeeCCCChHHHHHHHHhcc--CCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHH
Q 007499 263 WPKA--I-FEDFQMKWAFETLERYRKR--FCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVL 337 (601)
Q Consensus 263 ~P~~--l-~EDf~~~~Af~iL~ryr~~--~~~FnDDiQGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA 337 (601)
||.+ + ||||+++|||++|+|||++ +|||||||||||+|++||++||+|++|++++| +||||+|||+||+++|
T Consensus 132 ~p~f~~i~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~---~kVVv~GAGaAG~~iA 208 (388)
T 1vl6_A 132 EPSFGGINLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEE---VKVVVNGIGAAGYNIV 208 (388)
T ss_dssp GGGCSEEEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTT---CEEEEECCSHHHHHHH
T ss_pred CCcceEeCHhhcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCC---cEEEEECCCHHHHHHH
Confidence 9995 4 9999999999999999996 99999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCC--CChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecC
Q 007499 338 KMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKN--LDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG 415 (601)
Q Consensus 338 ~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~--l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~ 415 (601)
++|+.+ | .++||++|++|||+.+|.+ |+++|++||++.... ....+|.|+|+. +|+|||+|+
T Consensus 209 kll~~~-----G------~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~---~~~~~L~eav~~--ADVlIG~Sa 272 (388)
T 1vl6_A 209 KFLLDL-----G------VKNVVAVDRKGILNENDPETCLNEYHLEIARITNPE---RLSGDLETALEG--ADFFIGVSR 272 (388)
T ss_dssp HHHHHH-----T------CCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTT---CCCSCHHHHHTT--CSEEEECSC
T ss_pred HHHHhC-----C------CCeEEEEECCCcccCCCcccccCHHHHHHHHhhhcc---CchhhHHHHHcc--CCEEEEeCC
Confidence 999874 4 2799999999999999976 999999999975432 235789999999 899999999
Q ss_pred CCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCceecCCCeeeecccccccccchh
Q 007499 416 VGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPG 495 (601)
Q Consensus 416 ~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai~AsGSPf~pv~~~~G~~~~p~Q~NN~~iFPG 495 (601)
||+||+|+|+.|+ ++||||+|||||+ ||+||||++| |+||||| ||+++|||+||+|+|||
T Consensus 273 -p~l~t~emVk~Ma----~~pIIfalSNPt~--E~~p~~a~~~--g~~i~at-----------Gr~~~p~Q~NN~~~FPg 332 (388)
T 1vl6_A 273 -GNILKPEWIKKMS----RKPVIFALANPVP--EIDPELAREA--GAFIVAT-----------GRSDHPNQVNNLLAFPG 332 (388)
T ss_dssp -SSCSCHHHHTTSC----SSCEEEECCSSSC--SSCHHHHHHT--TCSEEEE-----------SCTTSSSBCCGGGTHHH
T ss_pred -CCccCHHHHHhcC----CCCEEEEcCCCCC--CCCHHHHHHh--cCeEEEe-----------CCCCCCCcCCceeEcch
Confidence 8999999999995 6999999999996 9999999999 9999999 48899999999999999
Q ss_pred hHHHHHHcCCcccCHHHHHHHHHHHhccCCCCCCCCCccccCCCCcchhhHHHHHHHHHHH
Q 007499 496 IGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAA 556 (601)
Q Consensus 496 iglG~l~~~a~~itd~m~~aAA~aLA~~v~~~~l~~g~l~P~l~~ireVs~~VA~aVa~~A 556 (601)
||+|++++||+ |||+|+++||++||+++ ++..++|||++++ ++||.+||.||+++|
T Consensus 333 i~~Gal~~~a~-i~~~m~~aAa~alA~~~---~~~~~~i~P~~~~-~~v~~~vA~aVa~~A 388 (388)
T 1vl6_A 333 IMKGAVEKRSK-ITKNMLLSAVEAIARSC---EPEPERIIPEAFD-MKVHLNVYTAVKGSA 388 (388)
T ss_dssp HHHHHHHHCSC-CCHHHHHHHHHHHHHTS---CCBTTBSSCCTTC-HHHHHHHHHHHHHCC
T ss_pred HhHHHHhcCCc-cCHHHHHHHHHHHHhhh---ccCCCcccCCCCc-chhhHHHHHHHHhhC
Confidence 99999999999 99999999999999999 6788999999999 999999999999875
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=1.7e-84 Score=699.32 Aligned_cols=389 Identities=29% Similarity=0.447 Sum_probs=350.6
Q ss_pred cccceeeeeeeccCcccccceeeccchHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCeeEEEEecCcccccc
Q 007499 107 DRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGL 186 (601)
Q Consensus 107 ~~Ne~Lfy~ll~~~~~e~lpiiYTPtVg~ac~~~s~~~r~prGlyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGL 186 (601)
.+-+ .++++.+++.++ |||+||||||++|++|+ +|++++++ |+.++++++|||||+|||||
T Consensus 18 gk~~-~~~~~~~~~~~~-l~~~YtP~v~~~c~~~~-------------~~~~~~~~----~~~~~~~v~vvtdgt~ilGl 78 (439)
T 2dvm_A 18 GKIE-VIPKVSLESREE-LTLAYTPGVAEPCKEIA-------------RDPGKVYE----YTSKGNLVAVVSDGSRILGL 78 (439)
T ss_dssp SSEE-EEESSCCCSHHH-HHHHSTTTTHHHHHHHH-------------HCGGGHHH----HSSGGGEEEEEECSTTBTTT
T ss_pred CEEE-EEEeeccCCHHH-CeeEECchhHHHHHHHH-------------HCHHHHHh----hcccCcEEEEEECCCeEecc
Confidence 4444 468999999966 69999999999999999 48888886 66678999999999999999
Q ss_pred CCCCCc-cccccchhhhHHHhhcCCCCCceecEEeeccCCchhcccCccccccccCCCChhhhhHhHHHHHHHHHHhCCC
Q 007499 187 GDLGVQ-GIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPK 265 (601)
Q Consensus 187 GDlG~~-Gm~I~iGKl~LY~a~gGI~P~~~lPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P~ 265 (601)
||+|.+ ++|+|+||++||++||||| ++|++||+ +| +|||+++|+.++|+
T Consensus 79 G~iG~hS~sPvmh~ka~lf~~~gGid---~~yi~ldv--------~d-------------------~de~~~~v~~l~~~ 128 (439)
T 2dvm_A 79 GNIGPLAGLPVMEGKALLFKRFGGVD---AFPIMIKE--------QE-------------------PNKFIDIVKAIAPT 128 (439)
T ss_dssp BCCCHHHHHHHHHHHHHHHHHHHCCE---EEEEECSC--------CS-------------------HHHHHHHHHHTGGG
T ss_pred cceeccccCHHHHHHHHHHHHhCCCC---Ceeeeeec--------CC-------------------HHHHHHHHHHhCcc
Confidence 999996 9999999999999999999 99999999 23 69999999999998
Q ss_pred e--E-EeeCCCChHHHHHHHHhcc--CCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHH
Q 007499 266 A--I-FEDFQMKWAFETLERYRKR--FCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMA 340 (601)
Q Consensus 266 ~--l-~EDf~~~~Af~iL~ryr~~--~~~FnDDiQGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll 340 (601)
+ + ||||+.|+||++|++|++. +||||||+||||.+.++|+++|++.+|+++++ +|+||+|||+||.+|+.+|
T Consensus 129 f~GinvED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~---~rvlvlGAGgAg~aia~~L 205 (439)
T 2dvm_A 129 FGGINLEDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISE---ITLALFGAGAAGFATLRIL 205 (439)
T ss_dssp CSEEEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTT---CCEEEECCSHHHHHHHHHH
T ss_pred CcEEEEEeCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccC---CEEEEECccHHHHHHHHHH
Confidence 5 3 9999999999999999985 89999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHHhcCCChhhhcCeEEEEe----cCccccCCCCC---CChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEee
Q 007499 341 VQAAARMAGNNDAFARNKFFLLD----KDGLITKERKN---LDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGL 413 (601)
Q Consensus 341 ~~~~~~~~Gls~eeA~~~i~lvD----~~GLi~~~r~~---l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~ 413 (601)
.+ .|.++ ++||++| ++||+++. .+ |.++|.+|++..... ....+|.|+++. +|+|||+
T Consensus 206 ~~-----~G~~~----~~I~vvd~~~~R~G~~~~a-~~~~~L~~~~~~~a~~~~~~---~~~~~L~e~l~~--aDVlIna 270 (439)
T 2dvm_A 206 TE-----AGVKP----ENVRVVELVNGKPRILTSD-LDLEKLFPYRGWLLKKTNGE---NIEGGPQEALKD--ADVLISF 270 (439)
T ss_dssp HH-----TTCCG----GGEEEEEEETTEEEECCTT-SCHHHHSTTCHHHHTTSCTT---CCCSSHHHHHTT--CSEEEEC
T ss_pred HH-----cCCCc----CeEEEEEccCCCcCccccc-cchhHHHHHHHHHhhccccc---cccccHHHHhcc--CCEEEEc
Confidence 86 47653 6899999 99999987 45 788888888753210 123579999987 8999999
Q ss_pred cCCC-CCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCceecCCCeeeeccccccccc
Q 007499 414 SGVG-GVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYL 492 (601)
Q Consensus 414 S~~~-g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai~AsGSPf~pv~~~~G~~~~p~Q~NN~~i 492 (601)
|+.+ |.|++++++.|+ ++||||+||||++ ||++++|.+| |++++|| |+++.|+|+||+|+
T Consensus 271 T~~~~G~~~~e~v~~m~----~~~iVfDLynP~~--t~~~~~A~~~--G~~ivat-----------G~~ml~~Q~nn~~~ 331 (439)
T 2dvm_A 271 TRPGPGVIKPQWIEKMN----EDAIVFPLANPVP--EILPEEAKKA--GARIVAT-----------GRSDYPNQINNLLG 331 (439)
T ss_dssp SCCCSSSSCHHHHTTSC----TTCEEEECCSSSC--SSCHHHHHHH--TCSEECB-----------SCSSSSSBCCGGGT
T ss_pred CCCccCCCChHHHHhcC----CCCEEEECCCCCC--cchHHHHHHc--CCeEEcC-----------CCchhHHHHHHHhc
Confidence 9975 999999999984 7999999999997 9999999998 8899998 58899999999999
Q ss_pred chhhHHHHHHcCCcccCHHHHHHHHHHHhccCCCCCCCCCccccCCCCcchhhHHHHHHHHHHHHHcCccCCCCCCCCCc
Q 007499 493 FPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAEGHGEVGPRD 572 (601)
Q Consensus 493 FPGiglG~l~~~a~~itd~m~~aAA~aLA~~v~~~~l~~g~l~P~l~~ireVs~~VA~aVa~~A~~~G~A~~~~~~~~~~ 572 (601)
|||||+|++++||++|||+|+++||++||++++++ ..+.|||++++ ++||.+||.||+++|+++|+|+.
T Consensus 332 FPGi~~g~l~~~a~~i~~~m~~aaa~ala~~~~~~--~~~~i~P~~~~-~~v~~~va~av~~~a~~~g~a~~-------- 400 (439)
T 2dvm_A 332 FPGIFRGALDVRARTITDSMIIAAAKAIASIVEEP--SEENIIPSPLN-PIVYAREARAVAEEAMKEGVART-------- 400 (439)
T ss_dssp HHHHHHHHHHTTCSCCCHHHHHHHHHHHHHTSSSC--BTTBCSCCTTC-HHHHHHHHHHHHHHHHHHTCCSS--------
T ss_pred ccCchHHHHhcCCCCCCHHHHHHHHHHHHhhCccc--cCCccCCCccc-chhhHHHHHHHHHHHHHhCCCCC--------
Confidence 99999999999999999999999999999999876 78999999999 99999999999999999999972
Q ss_pred CCCCCHHHHHHHHHhCCccCCC
Q 007499 573 LKHMSKEETVEYVTRSMWFPIY 594 (601)
Q Consensus 573 ~~~~~~~dl~~~i~~~mw~P~Y 594 (601)
+..++|+.+|+++.||.+.|
T Consensus 401 --~~~~~~~~~~~~~~~~~~~~ 420 (439)
T 2dvm_A 401 --KVKGEWVEEHTIRLIEFYEN 420 (439)
T ss_dssp --CCCHHHHHHHHHHHHHHHHH
T ss_pred --CCChHHHHHHHHHHhhhhHH
Confidence 34578999999999998764
No 8
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.81 E-value=1.4e-08 Score=109.69 Aligned_cols=161 Identities=16% Similarity=0.170 Sum_probs=117.9
Q ss_pred HHHHHHHHhCCCeE------EeeCCCChHHHHHHHHh---ccCCcc----------ccCcchhHHHHHHHHHHHHHHhCC
Q 007499 254 EFMEAVHARWPKAI------FEDFQMKWAFETLERYR---KRFCMF----------NDDIQGTAGVALAGLLGTVRAQGL 314 (601)
Q Consensus 254 efv~av~~~~P~~l------~EDf~~~~Af~iL~ryr---~~~~~F----------nDDiQGTaav~LAgll~Alr~~g~ 314 (601)
.++..++..||+.+ -|.=.+ -..|+-+..+ -.+|+| .|++.||+.+++.+++. .++.
T Consensus 132 dl~~~~h~~~~~~~~~i~G~~EeTtt-Gv~rL~~~~~~g~L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~r---atg~ 207 (436)
T 3h9u_A 132 DLTNYVLDECKELDGKIYGVSEETTT-GVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKR---ATDV 207 (436)
T ss_dssp HHHHHHHHHC-CCTTTCCCEEECSHH-HHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHH---HHCC
T ss_pred HHHHHHHHHhHHHHhhccceeeccCc-ChHHHHHHHHcCCCCCceEeechhhhhhhhhccccchHHHHHHHHH---hcCC
Confidence 36777778888764 454322 2223322222 238999 89999999999999964 5688
Q ss_pred CCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCccc
Q 007499 315 SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 394 (601)
Q Consensus 315 ~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~ 394 (601)
.+.. .+|+|+|.|..|.++|+.+..+ |. +++++|++. .+...|.... ..
T Consensus 208 ~L~G---ktVgIiG~G~IG~~vA~~Lka~-----Ga-------~Viv~D~~p-----------~~a~~A~~~G-----~~ 256 (436)
T 3h9u_A 208 MIAG---KTACVCGYGDVGKGCAAALRGF-----GA-------RVVVTEVDP-----------INALQAAMEG-----YQ 256 (436)
T ss_dssp CCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCH-----------HHHHHHHHTT-----CE
T ss_pred cccC---CEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEECCCh-----------hhhHHHHHhC-----Ce
Confidence 8888 9999999999999999998764 42 688888842 2222222110 12
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhc
Q 007499 395 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFK 457 (601)
Q Consensus 395 ~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~ 457 (601)
..+|.|+++. .|++|.+++..+.++++.++.|. +..||+-.|++.. |+.++++.+
T Consensus 257 ~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK----~gAIVINvgRg~v--EID~~~L~~ 311 (436)
T 3h9u_A 257 VLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMR----DDAIVCNIGHFDT--EIQVAWLKA 311 (436)
T ss_dssp ECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCC----TTEEEEECSSSGG--GBCHHHHHH
T ss_pred ecCHHHHHhh--CCEEEECCCCcCccCHHHHhhcC----CCcEEEEeCCCCC--ccCHHHHHh
Confidence 3579999987 89999888888999999999994 6899999999977 999987765
No 9
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.79 E-value=2.6e-08 Score=107.47 Aligned_cols=127 Identities=22% Similarity=0.272 Sum_probs=101.0
Q ss_pred CCcc----------ccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhc
Q 007499 287 FCMF----------NDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFAR 356 (601)
Q Consensus 287 ~~~F----------nDDiQGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~ 356 (601)
+|+| .|+++||+-++++|+..+ ++..+.. .+++|+|+|..|.++|+.+... |.
T Consensus 182 ~Pvi~vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~G---ktV~ViG~G~IGk~vA~~Lra~-----Ga------ 244 (435)
T 3gvp_A 182 VPAMNVNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGG---KQVVVCGYGEVGKGCCAALKAM-----GS------ 244 (435)
T ss_dssp SCEEECTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC------
T ss_pred CCEEEecchhhhhhhhhhhhhHHHHHHHHHHh---hCceecC---CEEEEEeeCHHHHHHHHHHHHC-----CC------
Confidence 8999 899999999999999765 7888888 9999999999999999988753 43
Q ss_pred CeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCC
Q 007499 357 NKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKP 436 (601)
Q Consensus 357 ~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erP 436 (601)
+++.+|++.. +...|.... ....+|.|+++. .|++|.+++..++++++.++.|. +..
T Consensus 245 -~Viv~D~dp~-----------ra~~A~~~G-----~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK----~ga 301 (435)
T 3gvp_A 245 -IVYVTEIDPI-----------CALQACMDG-----FRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMK----NSC 301 (435)
T ss_dssp -EEEEECSCHH-----------HHHHHHHTT-----CEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSC----TTE
T ss_pred -EEEEEeCChh-----------hhHHHHHcC-----CEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcC----CCc
Confidence 6888887531 111222110 013579999987 89999998889999999999994 678
Q ss_pred eEEecCCCCCccCCCHHHH
Q 007499 437 AIFAMSNPTMNAECTAADA 455 (601)
Q Consensus 437 IIFaLSNPt~~aE~tpeda 455 (601)
||+-.+++.. |+..+..
T Consensus 302 ilINvgrg~~--EId~~~L 318 (435)
T 3gvp_A 302 IVCNMGHSNT--EIDVASL 318 (435)
T ss_dssp EEEECSSTTT--TBTGGGG
T ss_pred EEEEecCCCc--cCCHHHH
Confidence 9999999976 7877665
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.39 E-value=9.5e-07 Score=94.02 Aligned_cols=227 Identities=16% Similarity=0.251 Sum_probs=132.8
Q ss_pred CChhhHHHHHhcCCCCCeeEEEEecCccccccCCCCCc--cccccchhhhHHHhhcCCCCCceecEEeeccCCchhcccC
Q 007499 155 KDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQ--GIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLED 232 (601)
Q Consensus 155 ~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~--Gm~I~iGKl~LY~a~gGI~P~~~lPV~LDvGTnN~~Ll~D 232 (601)
-+++.+.++... ..+|+|.|+++..+|++|.+.. |+.|+.+ ..+|. | +++|.+. +
T Consensus 25 ltP~~v~~L~~~----G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk--------~ 81 (401)
T 1x13_A 25 ATPKTVEQLLKL----GFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVN--------A 81 (401)
T ss_dssp CCHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSS--------C
T ss_pred CCHHHHHHHHHC----CCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeC--------C
Confidence 356777777774 4689999999999999999974 9999988 66765 1 5677653 2
Q ss_pred ccccccccCCCChhhhhHhHHHHHHHHHHhCCCeE-EeeCCCChHHHHHHHHhcc-CCccc-cCc------c----hhHH
Q 007499 233 RLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAI-FEDFQMKWAFETLERYRKR-FCMFN-DDI------Q----GTAG 299 (601)
Q Consensus 233 P~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P~~l-~EDf~~~~Af~iL~ryr~~-~~~Fn-DDi------Q----GTaa 299 (601)
| .++.++.+ -|+.. |-=+.....-..+++.+++ +.+|+ +.+ | .+..
T Consensus 82 p------------------~~~~i~~l---~~~~~li~~~~~~~d~~~~~al~~~gI~v~~~e~v~~~~~a~~l~~l~~~ 140 (401)
T 1x13_A 82 P------------------LDDEIALL---NPGTTLVSFIWPAQNPELMQKLAERNVTVMAMDSVPRISRAQSLDALSSM 140 (401)
T ss_dssp C------------------CHHHHTTC---CTTCEEEECCCGGGCHHHHHHHHHTTCEEEEGGGCCCSGGGGGGCHHHHH
T ss_pred C------------------CHHHHHHh---cCCCcEEEEecCCCCHHHHHHHHHCCCEEEEeehhhhhhhhcccchHHHH
Confidence 2 12333222 25443 2222211123355565554 77763 222 2 4555
Q ss_pred HHHHHHHHHHHHh----CCCC-------CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccc
Q 007499 300 VALAGLLGTVRAQ----GLSL-------TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 368 (601)
Q Consensus 300 v~LAgll~Alr~~----g~~l-------~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 368 (601)
..+|| .+|++.. ++.. .+|...+|+|+|+|.+|.++++++... |. +++.+|++.-.
T Consensus 141 a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~~-----Ga-------~V~v~D~~~~~ 207 (401)
T 1x13_A 141 ANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSL-----GA-------IVRAFDTRPEV 207 (401)
T ss_dssp HHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCGGG
T ss_pred HHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEcCCHHH
Confidence 56665 4444432 2210 123349999999999999999877643 42 58999986432
Q ss_pred cCCCCCCCh------------hhhccccccCC-CCCcccCCCHHHHhcccCCcEEEeecCCC-----CCCCHHHHHHhhh
Q 007499 369 TKERKNLDP------------AAAPFAKDPGD-FMGLREGASLLEVVRKVKPHVLLGLSGVG-----GVFNEEVLKAMRE 430 (601)
Q Consensus 369 ~~~r~~l~~------------~k~~fa~~~~~-~~~~~~~~~L~e~V~~vkptvLIG~S~~~-----g~Ft~evv~~Ma~ 430 (601)
......+.. .+-.|++...+ +. .....+|.++++. .|++|++...| .+++++.++.|.
T Consensus 208 ~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~mk- 283 (401)
T 1x13_A 208 KEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFI-KAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSMK- 283 (401)
T ss_dssp HHHHHHTTCEECCC--------CCHHHHHHSHHHH-HHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTSC-
T ss_pred HHHHHHcCCEEEEecccccccccccchhhccHHHH-HHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC-
Confidence 110000100 00001110000 00 0000147788876 89999985443 679999999994
Q ss_pred cCCCCCeEEecCCCC
Q 007499 431 SDSVKPAIFAMSNPT 445 (601)
Q Consensus 431 ~~~erPIIFaLSNPt 445 (601)
+..+|+-+|+|.
T Consensus 284 ---~g~vIVdva~~~ 295 (401)
T 1x13_A 284 ---AGSVIVDLAAQN 295 (401)
T ss_dssp ---TTCEEEETTGGG
T ss_pred ---CCcEEEEEcCCC
Confidence 678999999873
No 11
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.81 E-value=8.4e-05 Score=80.81 Aligned_cols=129 Identities=19% Similarity=0.211 Sum_probs=96.2
Q ss_pred cCCcc----------ccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhh
Q 007499 286 RFCMF----------NDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFA 355 (601)
Q Consensus 286 ~~~~F----------nDDiQGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA 355 (601)
.+|+| .|...||+-.++.|+. |.++..+.. .+++|+|.|..|.++|+.+... |+
T Consensus 208 ~~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~G---KTVgVIG~G~IGr~vA~~lraf-----Ga----- 271 (464)
T 3n58_A 208 PFPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAG---KVAVVCGYGDVGKGSAQSLAGA-----GA----- 271 (464)
T ss_dssp CSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-----
T ss_pred CCCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccC---CEEEEECcCHHHHHHHHHHHHC-----CC-----
Confidence 37998 6778999999988885 567888888 9999999999999999888654 42
Q ss_pred cCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCC
Q 007499 356 RNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVK 435 (601)
Q Consensus 356 ~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~er 435 (601)
+++.+|++.. ....+.... ....+|.|+++. .|+++.+++..++++++.++.|. +.
T Consensus 272 --~Viv~d~dp~-----------~a~~A~~~G-----~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK----~G 327 (464)
T 3n58_A 272 --RVKVTEVDPI-----------CALQAAMDG-----FEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMK----DM 327 (464)
T ss_dssp --EEEEECSSHH-----------HHHHHHHTT-----CEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSC----TT
T ss_pred --EEEEEeCCcc-----------hhhHHHhcC-----ceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCC----CC
Confidence 6888876421 111111100 012579999987 89999988888999999999994 68
Q ss_pred CeEEecCCCCCccCCCHHHHh
Q 007499 436 PAIFAMSNPTMNAECTAADAF 456 (601)
Q Consensus 436 PIIFaLSNPt~~aE~tpeda~ 456 (601)
.||.-.++... |+..+...
T Consensus 328 AILINvGRgdv--EID~~aL~ 346 (464)
T 3n58_A 328 CIVGNIGHFDN--EIQVAALR 346 (464)
T ss_dssp EEEEECSSSTT--TBTCGGGT
T ss_pred eEEEEcCCCCc--ccCHHHHH
Confidence 88888888765 66655443
No 12
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.75 E-value=7.3e-05 Score=81.93 Aligned_cols=130 Identities=21% Similarity=0.274 Sum_probs=97.0
Q ss_pred cCCcc----------ccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhh
Q 007499 286 RFCMF----------NDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFA 355 (601)
Q Consensus 286 ~~~~F----------nDDiQGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA 355 (601)
.+|+| .|+++||+..++.++. |.++..|.. .+++|.|+|..|.++|+.+... |.
T Consensus 226 ~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~G---KtVvVtGaGgIG~aiA~~Laa~-----GA----- 289 (488)
T 3ond_A 226 LFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAG---KVAVVAGYGDVGKGCAAALKQA-----GA----- 289 (488)
T ss_dssp CSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-----
T ss_pred CCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccC---CEEEEECCCHHHHHHHHHHHHC-----CC-----
Confidence 38999 6899999999999886 788988888 9999999998888888777653 42
Q ss_pred cCeEEEEecCccccCCCCCCChhhhcccc-ccCCCCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCC
Q 007499 356 RNKFFLLDKDGLITKERKNLDPAAAPFAK-DPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSV 434 (601)
Q Consensus 356 ~~~i~lvD~~GLi~~~r~~l~~~k~~fa~-~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~e 434 (601)
+++++|++.. +...+. ... ...++.++++. .|+++-+++..++++.+.++.|. +
T Consensus 290 --~Viv~D~~~~-----------~a~~Aa~~g~------dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk----~ 344 (488)
T 3ond_A 290 --RVIVTEIDPI-----------CALQATMEGL------QVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMK----N 344 (488)
T ss_dssp --EEEEECSCHH-----------HHHHHHHTTC------EECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSC----T
T ss_pred --EEEEEcCCHH-----------HHHHHHHhCC------ccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcC----C
Confidence 7888887521 111111 100 12346666665 79999988888999999999994 6
Q ss_pred CCeEEecCCCCCccCCCHHHHhcc
Q 007499 435 KPAIFAMSNPTMNAECTAADAFKH 458 (601)
Q Consensus 435 rPIIFaLSNPt~~aE~tpeda~~w 458 (601)
..||+-.+++.. |+..++.-.|
T Consensus 345 gaiVvNaG~~~~--Ei~~~~l~~~ 366 (488)
T 3ond_A 345 NAIVCNIGHFDN--EIDMLGLETH 366 (488)
T ss_dssp TEEEEESSSTTT--TBTHHHHHTS
T ss_pred CeEEEEcCCCCc--ccchHHHHHh
Confidence 889999998854 7877776555
No 13
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.16 E-value=0.0035 Score=65.84 Aligned_cols=236 Identities=16% Similarity=0.202 Sum_probs=121.8
Q ss_pred ChhhHHHHHhcCCCCCeeEEEEecCccccccCCCCC--ccccccchhhhHHHhhcCCCCCceecEEeeccCC-----chh
Q 007499 156 DKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGV--QGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTN-----NQK 228 (601)
Q Consensus 156 d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~--~Gm~I~iGKl~LY~a~gGI~P~~~lPV~LDvGTn-----N~~ 228 (601)
.|..+.++... ..+|+|.++++...|+.|... .|..|+.++-.++ ++.| |+|.+.+- +++
T Consensus 19 ~P~~v~~L~~~----G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~ad------iil~v~~p~~~~~~~~ 85 (384)
T 1l7d_A 19 SPEVVKKLVGL----GFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQAD------VVWKVQRPMTAEEGTD 85 (384)
T ss_dssp CHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSCS------EEEEEECCCCGGGSCC
T ss_pred CHHHHHHHHhC----CCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCCC------EEEEecCcccccCCHH
Confidence 56677777763 568999999999999999886 4889988877666 3333 56665321 111
Q ss_pred c---c-cCccccccccCCCChhhhhHhHHHHHHHHHHhCCCeE-EeeCCCChHHHHHHHHhccCCccccCcchhHHHHHH
Q 007499 229 L---L-EDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAI-FEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVALA 303 (601)
Q Consensus 229 L---l-~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P~~l-~EDf~~~~Af~iL~ryr~~~~~FnDDiQGTaav~LA 303 (601)
. + ..-.+++.-|. .++ .+.+++++++--.++ +|-.....+ ...+++|+ ....+|
T Consensus 86 ~i~~l~~~~~~i~~~~~-----~~~---~~~~~~~~~~gi~~~~~e~~~~~~~-------~~~l~~l~------~~a~~a 144 (384)
T 1l7d_A 86 EVALIKEGAVLMCHLGA-----LTN---RPVVEALTKRKITAYAMELMPRISR-------AQSMDILS------SQSNLA 144 (384)
T ss_dssp GGGGSCTTCEEEEECCG-----GGC---HHHHHHHHHTTCEEEEGGGCCCSGG-------GGGGCHHH------HHHHHH
T ss_pred HHHhhccCCEEEEEecc-----cCC---HHHHHHHHHCCCEEEEecccccccc-------ccccchhh------HHHHHH
Confidence 1 1 01112222221 000 112333333333333 221111000 00112222 111222
Q ss_pred ---HHHHHHHHhCCCC-------CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCC
Q 007499 304 ---GLLGTVRAQGLSL-------TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERK 373 (601)
Q Consensus 304 ---gll~Alr~~g~~l-------~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~ 373 (601)
+++.+.+..++.. .++...+|+|+|+|.+|.+++..+... |. +|+.+|++.--.....
T Consensus 145 g~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~~-----Ga-------~V~~~d~~~~~~~~~~ 212 (384)
T 1l7d_A 145 GYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRL-----GA-------VVMATDVRAATKEQVE 212 (384)
T ss_dssp HHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCSTTHHHHH
T ss_pred HHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHHHHHH
Confidence 5566666655411 234459999999999999998876543 42 4889998532100000
Q ss_pred CCC-------h-------hhhccccccC-CCCCcccCCCHHHHhcccCCcEEEeec---C--CCCCCCHHHHHHhhhcCC
Q 007499 374 NLD-------P-------AAAPFAKDPG-DFMGLREGASLLEVVRKVKPHVLLGLS---G--VGGVFNEEVLKAMRESDS 433 (601)
Q Consensus 374 ~l~-------~-------~k~~fa~~~~-~~~~~~~~~~L~e~V~~vkptvLIG~S---~--~~g~Ft~evv~~Ma~~~~ 433 (601)
.+. . .+-.|++... ++. ......|.+.++. .|++|.++ + .+.+++++.++.|.
T Consensus 213 ~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~-~~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~mk---- 285 (384)
T 1l7d_A 213 SLGGKFITVDDEAMKTAETAGGYAKEMGEEFR-KKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTKMK---- 285 (384)
T ss_dssp HTTCEECCC------------------------CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTSC----
T ss_pred HcCCeEEeecccccccccccccchhhcCHHHH-hhhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC----
Confidence 000 0 0000111000 000 0001127777775 89999988 3 23578999999994
Q ss_pred CCCeEEecCCC
Q 007499 434 VKPAIFAMSNP 444 (601)
Q Consensus 434 erPIIFaLSNP 444 (601)
+..+|+-+|-+
T Consensus 286 ~g~vivdva~~ 296 (384)
T 1l7d_A 286 PGSVIIDLAVE 296 (384)
T ss_dssp TTCEEEETTGG
T ss_pred CCCEEEEEecC
Confidence 57889988854
No 14
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.78 E-value=0.00041 Score=74.38 Aligned_cols=112 Identities=21% Similarity=0.306 Sum_probs=69.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCC--------------hhhhcccccc
Q 007499 321 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLD--------------PAAAPFAKDP 386 (601)
Q Consensus 321 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~--------------~~k~~fa~~~ 386 (601)
..||+|+|+|.+|.++|+++... |. +++++|++.-..+....+. +.+..|++..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~ 257 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRL-----GA-------VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEM 257 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSTTHHHHHHHTTCEECCCCC----------------
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhc
Confidence 39999999999999999988754 32 6899998753211000000 0011133211
Q ss_pred CC-CCCcccCCCHHHHhcccCCcEEEeecCC-----CCCCCHHHHHHhhhcCCCCCeEEecCC-CCCccCCC
Q 007499 387 GD-FMGLREGASLLEVVRKVKPHVLLGLSGV-----GGVFNEEVLKAMRESDSVKPAIFAMSN-PTMNAECT 451 (601)
Q Consensus 387 ~~-~~~~~~~~~L~e~V~~vkptvLIG~S~~-----~g~Ft~evv~~Ma~~~~erPIIFaLSN-Pt~~aE~t 451 (601)
.+ +. ..+..+|.|+++. .|++|++... |.+||+++|+.|. +..||+-+|- |-...|.+
T Consensus 258 s~~~~-~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk----~GsVIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 258 SGEYQ-VKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMK----PGSVVVDLAVERGGNIEGA 322 (405)
T ss_dssp -CHHH-HHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSC----TTCEEEETTGGGTCSBTTC
T ss_pred chhhh-hhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCC----CCCEEEEEeCCCCCCcccc
Confidence 00 00 0012479999988 8999998433 4689999999994 7899999994 32334544
No 15
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.16 E-value=0.0031 Score=67.14 Aligned_cols=106 Identities=16% Similarity=0.245 Sum_probs=65.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCC-------C---hhhhccccccCC-C
Q 007499 321 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNL-------D---PAAAPFAKDPGD-F 389 (601)
Q Consensus 321 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l-------~---~~k~~fa~~~~~-~ 389 (601)
..||+|+|+|.+|..+|+.+... |. +++++|++.-....-..+ . .....|++...+ +
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~ 251 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAE 251 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHH
Confidence 38999999999999999988764 32 689999874211000000 0 000011111000 0
Q ss_pred CCcccCCCHHHHhcccCCcEEEeecCC-----CCCCCHHHHHHhhhcCCCCCeEEecCCCC
Q 007499 390 MGLREGASLLEVVRKVKPHVLLGLSGV-----GGVFNEEVLKAMRESDSVKPAIFAMSNPT 445 (601)
Q Consensus 390 ~~~~~~~~L~e~V~~vkptvLIG~S~~-----~g~Ft~evv~~Ma~~~~erPIIFaLSNPt 445 (601)
...+..+|.++++. .|++|++... |.+||+++++.|. +..+|+-+|=+.
T Consensus 252 -~~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mk----pGsVIVDvA~d~ 305 (381)
T 3p2y_A 252 -RAQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQ----PGSVVVDLAGET 305 (381)
T ss_dssp -HHHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSC----TTCEEEETTGGG
T ss_pred -HhhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCC----CCcEEEEEeCCC
Confidence 00012468899987 8999997433 4579999999994 688999998543
No 16
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.10 E-value=0.029 Score=56.51 Aligned_cols=141 Identities=14% Similarity=0.123 Sum_probs=89.9
Q ss_pred HHHHHHHhc-cCCccccC------cchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcC
Q 007499 277 FETLERYRK-RFCMFNDD------IQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAG 349 (601)
Q Consensus 277 f~iL~ryr~-~~~~FnDD------iQGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~G 349 (601)
..+++..++ .+.++|-. .-.+-+|+=.++..++...+..+.. .+++|+|+|..|..+|+.+... |
T Consensus 107 id~~~~~~~~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~~~~~l~g---~~v~IiG~G~iG~~~a~~l~~~-----G 178 (293)
T 3d4o_A 107 TYLNQCMKKTNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQHTDFTIHG---ANVAVLGLGRVGMSVARKFAAL-----G 178 (293)
T ss_dssp HHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHHCSSCSTT---CEEEEECCSHHHHHHHHHHHHT-----T
T ss_pred HHHHHHHHHcCCeEEEecCCceeeeeccHhHHHHHHHHHHHhcCCCCCC---CEEEEEeeCHHHHHHHHHHHhC-----C
Confidence 444444444 37777743 3345555555665666677777777 9999999999999999887643 4
Q ss_pred CChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhh
Q 007499 350 NNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMR 429 (601)
Q Consensus 350 ls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma 429 (601)
. +++.+|+..- .+...+ .+ ...+ ....+|.++++. .|++|-+. ..+.++++.++.|.
T Consensus 179 ~-------~V~~~dr~~~------~~~~~~-~~---g~~~---~~~~~l~~~l~~--aDvVi~~~-p~~~i~~~~l~~mk 235 (293)
T 3d4o_A 179 A-------KVKVGARESD------LLARIA-EM---GMEP---FHISKAAQELRD--VDVCINTI-PALVVTANVLAEMP 235 (293)
T ss_dssp C-------EEEEEESSHH------HHHHHH-HT---TSEE---EEGGGHHHHTTT--CSEEEECC-SSCCBCHHHHHHSC
T ss_pred C-------EEEEEECCHH------HHHHHH-HC---CCee---cChhhHHHHhcC--CCEEEECC-ChHHhCHHHHHhcC
Confidence 2 6888888520 000000 01 0000 012358888876 89999765 46899999999983
Q ss_pred hcCCCCCeEEecC-CCCCccCCCHHHH
Q 007499 430 ESDSVKPAIFAMS-NPTMNAECTAADA 455 (601)
Q Consensus 430 ~~~~erPIIFaLS-NPt~~aE~tpeda 455 (601)
+..+|+=+| +|. ++..+.+
T Consensus 236 ----~~~~lin~ar~~~---~~~~~~a 255 (293)
T 3d4o_A 236 ----SHTFVIDLASKPG---GTDFRYA 255 (293)
T ss_dssp ----TTCEEEECSSTTC---SBCHHHH
T ss_pred ----CCCEEEEecCCCC---CCCHHHH
Confidence 567888888 454 3445444
No 17
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.93 E-value=0.011 Score=61.31 Aligned_cols=96 Identities=18% Similarity=0.194 Sum_probs=76.6
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCC
Q 007499 296 GTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAG-SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKN 374 (601)
Q Consensus 296 GTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAG-sAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~ 374 (601)
+-.-+|-.|++-.++..+.++.. .++||+|+| ..|.-+|.++... | .++.+++|+
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~g---k~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~--------- 198 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAG---RHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK--------- 198 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTT---CEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT---------
T ss_pred CccCchHHHHHHHHHHcCCCCCC---CEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC---------
Confidence 44567888899999999998888 999999999 5799999888753 3 368888743
Q ss_pred CChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCC
Q 007499 375 LDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNP 444 (601)
Q Consensus 375 l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNP 444 (601)
..+|.+.++. +|++|++.+.|+.+|+++|+ +.-+|+=++-|
T Consensus 199 --------------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDVgi~ 239 (301)
T 1a4i_A 199 --------------------TAHLDEEVNK--GDILVVATGQPEMVKGEWIK-------PGAIVIDCGIN 239 (301)
T ss_dssp --------------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC-------TTCEEEECCCB
T ss_pred --------------------cccHHHHhcc--CCEEEECCCCcccCCHHHcC-------CCcEEEEccCC
Confidence 1358899988 89999999999999998875 34577766654
No 18
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.83 E-value=0.015 Score=59.81 Aligned_cols=92 Identities=17% Similarity=0.255 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCC
Q 007499 298 AGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLD 376 (601)
Q Consensus 298 aav~LAgll~Alr~~g~~l~dl~~~riv~~GAGs-Ag~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~ 376 (601)
.-+|-.|++..++..+.+++. .++|++|+|. .|..+|.+|... | -.+.+++|+
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~G---k~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~----------- 194 (285)
T 3l07_A 141 ESCTPKGIMTMLREYGIKTEG---AYAVVVGASNVVGKPVSQLLLNA-----K-------ATVTTCHRF----------- 194 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTT---CEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT-----------
T ss_pred CCCCHHHHHHHHHHhCCCCCC---CEEEEECCCchhHHHHHHHHHHC-----C-------CeEEEEeCC-----------
Confidence 456788899999999998888 9999999876 899999988753 3 257777652
Q ss_pred hhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecC
Q 007499 377 PAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMS 442 (601)
Q Consensus 377 ~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLS 442 (601)
..+|.+.++. +|++|.+.+.++.+++++|| +.-+|+=++
T Consensus 195 ------------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDvg 233 (285)
T 3l07_A 195 ------------------TTDLKSHTTK--ADILIVAVGKPNFITADMVK-------EGAVVIDVG 233 (285)
T ss_dssp ------------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC-------TTCEEEECC
T ss_pred ------------------chhHHHhccc--CCEEEECCCCCCCCCHHHcC-------CCcEEEEec
Confidence 1248899988 89999999999999998774 344666554
No 19
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.81 E-value=0.015 Score=59.64 Aligned_cols=96 Identities=16% Similarity=0.259 Sum_probs=75.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCC
Q 007499 297 TAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNL 375 (601)
Q Consensus 297 Taav~LAgll~Alr~~g~~l~dl~~~riv~~GAGs-Ag~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l 375 (601)
-.-+|-.|++..++..+.+++. .++|++|+|. .|..+|.+|... | -.+.+++|+
T Consensus 139 ~~PcTp~gv~~lL~~~~i~l~G---k~vvVvGrs~iVG~p~A~lL~~~-----g-------AtVtv~h~~---------- 193 (285)
T 3p2o_A 139 FLPCTPLGVMKLLKAYEIDLEG---KDAVIIGASNIVGRPMATMLLNA-----G-------ATVSVCHIK---------- 193 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTT---CEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT----------
T ss_pred CCCCCHHHHHHHHHHhCCCCCC---CEEEEECCCchHHHHHHHHHHHC-----C-------CeEEEEeCC----------
Confidence 4567888999999999999888 9999999876 899999988753 3 257888752
Q ss_pred ChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecC-CCC
Q 007499 376 DPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMS-NPT 445 (601)
Q Consensus 376 ~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLS-NPt 445 (601)
..+|.+.++. +|++|.+.+.++.++.++|| +.-+|+=++ ||.
T Consensus 194 -------------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDVgi~~~ 236 (285)
T 3p2o_A 194 -------------------TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK-------EGVIVVDVGINRL 236 (285)
T ss_dssp -------------------CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC-------TTEEEEECCCEEC
T ss_pred -------------------chhHHHHhhc--CCEEEECCCCCCcCCHHHcC-------CCeEEEEeccCcc
Confidence 1248899988 89999999999999998875 344666553 443
No 20
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.65 E-value=0.018 Score=59.20 Aligned_cols=95 Identities=18% Similarity=0.242 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCC
Q 007499 298 AGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLD 376 (601)
Q Consensus 298 aav~LAgll~Alr~~g~~l~dl~~~riv~~GAGs-Ag~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~ 376 (601)
.-+|-.|++..++..+.+++. .++|++|+|. .|..+|.+|... | ..+.+++|+
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~G---k~vvVvGrs~iVG~plA~lL~~~-----g-------AtVtv~hs~----------- 194 (286)
T 4a5o_A 141 RPCTPKGIMTLLASTGADLYG---MDAVVVGASNIVGRPMALELLLG-----G-------CTVTVTHRF----------- 194 (286)
T ss_dssp CCHHHHHHHHHHHHTTCCCTT---CEEEEECTTSTTHHHHHHHHHHT-----T-------CEEEEECTT-----------
T ss_pred CCCCHHHHHHHHHHhCCCCCC---CEEEEECCCchhHHHHHHHHHHC-----C-------CeEEEEeCC-----------
Confidence 456788899999999998888 9999999875 899999988753 3 257777652
Q ss_pred hhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEec-CCCC
Q 007499 377 PAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAM-SNPT 445 (601)
Q Consensus 377 ~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaL-SNPt 445 (601)
..+|.+.++. +|++|++.+.++.++.++|| +.-+|+=+ +||.
T Consensus 195 ------------------T~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDvgi~~~ 237 (286)
T 4a5o_A 195 ------------------TRDLADHVSR--ADLVVVAAGKPGLVKGEWIK-------EGAIVIDVGINRQ 237 (286)
T ss_dssp ------------------CSCHHHHHHT--CSEEEECCCCTTCBCGGGSC-------TTCEEEECCSCSS
T ss_pred ------------------CcCHHHHhcc--CCEEEECCCCCCCCCHHHcC-------CCeEEEEeccccc
Confidence 1248899988 89999999999999998875 34466655 3554
No 21
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.57 E-value=0.015 Score=59.74 Aligned_cols=96 Identities=15% Similarity=0.151 Sum_probs=75.5
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCC
Q 007499 296 GTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKN 374 (601)
Q Consensus 296 GTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGs-Ag~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~ 374 (601)
+-.-+|-.|++-.++..+.++.. .++||+|+|. .|.-+|.++... | .++++++|+
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l~g---k~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~--------- 192 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDTFG---LNAVVIGASNIVGRPMSMELLLA-----G-------CTTTVTHRF--------- 192 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTT---CEEEEECCCTTTHHHHHHHHHTT-----T-------CEEEEECSS---------
T ss_pred CCCCCcHHHHHHHHHHcCCCCCC---CEEEEECCChHHHHHHHHHHHHC-----C-------CeEEEEeCC---------
Confidence 44567888899999999998888 9999999995 699988887652 3 368888642
Q ss_pred CChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCC
Q 007499 375 LDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNP 444 (601)
Q Consensus 375 l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNP 444 (601)
..+|.+.++. +|++|+..+.++.+++++|| +.-+|+=++-|
T Consensus 193 --------------------t~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk-------~GavVIDVgi~ 233 (288)
T 1b0a_A 193 --------------------TKNLRHHVEN--ADLLIVAVGKPGFIPGDWIK-------EGAIVIDVGIN 233 (288)
T ss_dssp --------------------CSCHHHHHHH--CSEEEECSCCTTCBCTTTSC-------TTCEEEECCCE
T ss_pred --------------------chhHHHHhcc--CCEEEECCCCcCcCCHHHcC-------CCcEEEEccCC
Confidence 1358899988 89999999999999998874 34466666644
No 22
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.38 E-value=0.023 Score=58.17 Aligned_cols=92 Identities=10% Similarity=0.172 Sum_probs=71.7
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCC
Q 007499 296 GTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAG-SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKN 374 (601)
Q Consensus 296 GTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAG-sAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~ 374 (601)
+-.-+|-.|++..++..+ ++. .++|++|+| ..|..+|.++... | -.+++++++
T Consensus 130 ~~~PcTp~gv~~lL~~~~--l~G---k~vvVvG~s~iVG~plA~lL~~~-----g-------AtVtv~~~~--------- 183 (276)
T 3ngx_A 130 FLVPATPRAVIDIMDYYG--YHE---NTVTIVNRSPVVGRPLSMMLLNR-----N-------YTVSVCHSK--------- 183 (276)
T ss_dssp SSCCHHHHHHHHHHHHHT--CCS---CEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT---------
T ss_pred CCCCCcHHHHHHHHHHhC--cCC---CEEEEEcCChHHHHHHHHHHHHC-----C-------CeEEEEeCC---------
Confidence 344578889999999998 777 999999998 5899999988763 3 258888752
Q ss_pred CChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecC
Q 007499 375 LDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMS 442 (601)
Q Consensus 375 l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLS 442 (601)
..+|.+.+++ +|++|++.+.|+.+++++|| +.-+|+=++
T Consensus 184 --------------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDvg 222 (276)
T 3ngx_A 184 --------------------TKDIGSMTRS--SKIVVVAVGRPGFLNREMVT-------PGSVVIDVG 222 (276)
T ss_dssp --------------------CSCHHHHHHH--SSEEEECSSCTTCBCGGGCC-------TTCEEEECC
T ss_pred --------------------cccHHHhhcc--CCEEEECCCCCccccHhhcc-------CCcEEEEec
Confidence 1348899998 89999999999999997764 344666554
No 23
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=95.17 E-value=0.027 Score=58.27 Aligned_cols=96 Identities=14% Similarity=0.268 Sum_probs=74.4
Q ss_pred cchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCC
Q 007499 294 IQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER 372 (601)
Q Consensus 294 iQGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGs-Ag~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r 372 (601)
..|-.-+|-.|++..++..+.+++. .++|++|+|. .|..+|.+|... | -.+.+++++
T Consensus 141 ~~~~~PcTp~gv~~lL~~~~i~l~G---k~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~~~~------- 198 (300)
T 4a26_A 141 EPPFTPCTAKGVIVLLKRCGIEMAG---KRAVVLGRSNIVGAPVAALLMKE-----N-------ATVTIVHSG------- 198 (300)
T ss_dssp CCSCCCHHHHHHHHHHHHHTCCCTT---CEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT-------
T ss_pred cCCCCCCCHHHHHHHHHHcCCCCCC---CEEEEECCCchHHHHHHHHHHHC-----C-------CeEEEEeCC-------
Confidence 3444567888999999999999888 9999999876 899999988763 3 258888762
Q ss_pred CCCChhhhccccccCCCCCcccCCCHH--HHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecC
Q 007499 373 KNLDPAAAPFAKDPGDFMGLREGASLL--EVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMS 442 (601)
Q Consensus 373 ~~l~~~k~~fa~~~~~~~~~~~~~~L~--e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLS 442 (601)
+ .+|. +.+++ .|++|.+.+.++.++.++|+ +.-+|+=++
T Consensus 199 T----------------------~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDvg 239 (300)
T 4a26_A 199 T----------------------STEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK-------EGAAVVDVG 239 (300)
T ss_dssp S----------------------CHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC-------TTCEEEECC
T ss_pred C----------------------CCchhhhhhcc--CCEEEECCCCCCCCcHHhcC-------CCcEEEEEe
Confidence 0 1355 88888 89999999999999998774 344666554
No 24
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=94.79 E-value=0.41 Score=47.83 Aligned_cols=122 Identities=14% Similarity=0.151 Sum_probs=74.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 321 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 321 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
..||.|+|+|..|.++|..+.. .|... .+|+++|++- +.+...+..| . .....++.|
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~-----~g~~~----~~V~v~dr~~------~~~~~l~~~~---g-----i~~~~~~~~ 59 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIA-----NGYDP----NRICVTNRSL------DKLDFFKEKC---G-----VHTTQDNRQ 59 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHH-----TTCCG----GGEEEECSSS------HHHHHHHHTT---C-----CEEESCHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHH-----CCCCC----CeEEEEeCCH------HHHHHHHHHc---C-----CEEeCChHH
Confidence 3789999999999999988765 35432 4688888741 1121111111 1 012357889
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhc-CCCCCeEEecCCCCCccCCCHHHHhcccCC--cEEEEcCCCCCceec
Q 007499 401 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRES-DSVKPAIFAMSNPTMNAECTAADAFKHAGE--NIVFASGSPFENVDL 476 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~-~~erPIIFaLSNPt~~aE~tpeda~~wt~G--rai~AsGSPf~pv~~ 476 (601)
+++. +|++| ++..+ -..+++++.+... ..++.+|...++..+. +..-+|... +++-+ -|+.|...
T Consensus 60 ~~~~--aDvVi-lav~p-~~~~~vl~~l~~~~l~~~~iiiS~~agi~~-----~~l~~~l~~~~~vvr~--mPn~p~~v 127 (280)
T 3tri_A 60 GALN--ADVVV-LAVKP-HQIKMVCEELKDILSETKILVISLAVGVTT-----PLIEKWLGKASRIVRA--MPNTPSSV 127 (280)
T ss_dssp HHSS--CSEEE-ECSCG-GGHHHHHHHHHHHHHTTTCEEEECCTTCCH-----HHHHHHHTCCSSEEEE--ECCGGGGG
T ss_pred HHhc--CCeEE-EEeCH-HHHHHHHHHHHhhccCCCeEEEEecCCCCH-----HHHHHHcCCCCeEEEE--ecCChHHh
Confidence 9987 78877 44334 4457888888542 3566688888887763 333444432 33322 46666665
No 25
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=94.62 E-value=0.32 Score=52.50 Aligned_cols=183 Identities=16% Similarity=0.186 Sum_probs=122.1
Q ss_pred CCChhhhhHhHHHHHHHHHHhC-CC-eE-EeeCCCChHH-H-HHHHHhccC-----Ccc----------ccCcchhHHHH
Q 007499 242 RLEGEEYLSIVDEFMEAVHARW-PK-AI-FEDFQMKWAF-E-TLERYRKRF-----CMF----------NDDIQGTAGVA 301 (601)
Q Consensus 242 R~~g~~Y~~~vdefv~av~~~~-P~-~l-~EDf~~~~Af-~-iL~ryr~~~-----~~F----------nDDiQGTaav~ 301 (601)
..+..|-..|...|++++.+.- |+ -+ =+|++..-.. . +.+.|+... .++ .+--.-||-=+
T Consensus 125 ~~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv 204 (424)
T 3k92_A 125 TMSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGV 204 (424)
T ss_dssp GSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHH
Confidence 3455677788999999998766 63 45 8898874222 2 556775321 122 23345588888
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhh-h
Q 007499 302 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAA-A 380 (601)
Q Consensus 302 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k-~ 380 (601)
..++-.+++..|.+|+. .||+|-|.|..|...|++|.+. |. +-+.+.|++|-|++.. .|+... +
T Consensus 205 ~~~~~~~~~~~g~~l~g---~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~-GlD~~~l~ 269 (424)
T 3k92_A 205 TICIEEAVKKKGIKLQN---ARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPD-GLDIPYLL 269 (424)
T ss_dssp HHHHHHHHHHTTCCGGG---CEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTT-CCCHHHHH
T ss_pred HHHHHHHHHHcCCCccc---CEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC-CCCHHHHH
Confidence 88888999999998888 9999999999999999998764 32 3467999999999754 344322 1
Q ss_pred ccccccCCCCCc-ccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007499 381 PFAKDPGDFMGL-REGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 446 (601)
Q Consensus 381 ~fa~~~~~~~~~-~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN-Pt~ 446 (601)
.+......+.+. ....+-.++ -.++.||||=+.. .+..|++-++.+ .-.+|.--+| |+.
T Consensus 270 ~~~~~~g~i~~~~a~~~~~~~i-~~~~~DIliPcA~-~n~I~~~~a~~l-----~ak~V~EgAN~p~t 330 (424)
T 3k92_A 270 DKRDSFGMVTNLFTDVITNEEL-LEKDCDILVPAAI-SNQITAKNAHNI-----QASIVVERANGPTT 330 (424)
T ss_dssp HHCCSSSCCGGGCSCCBCHHHH-HHSCCSEEEECSC-SSCBCTTTGGGC-----CCSEEECCSSSCBC
T ss_pred HHHHHhCCCCCCCcEEecCccc-eeccccEEeecCc-ccccChhhHhhc-----CceEEEcCCCCCCC
Confidence 111111100000 011233343 3568999998887 599999988877 4678888888 653
No 26
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=94.46 E-value=0.03 Score=58.32 Aligned_cols=115 Identities=15% Similarity=0.180 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHH---------hCCCCCCCCCceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcccc
Q 007499 300 VALAGLLGTVRA---------QGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLIT 369 (601)
Q Consensus 300 v~LAgll~Alr~---------~g~~l~dl~~~riv~~GAGs-Ag~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~ 369 (601)
+|-.|.+-.++. .|.++.. .+++|+|+|. .|.-+|.++... | .+++++|++..-.
T Consensus 150 cTp~a~v~ll~~~~~~~~~~~~g~~l~g---k~vvVIG~G~iVG~~~A~~L~~~-----g-------AtVtv~nR~~~~l 214 (320)
T 1edz_A 150 CTPLAIVKILEFLKIYNNLLPEGNRLYG---KKCIVINRSEIVGRPLAALLAND-----G-------ATVYSVDVNNIQK 214 (320)
T ss_dssp HHHHHHHHHHHHTTCSCTTSCTTCTTTT---CEEEEECCCTTTHHHHHHHHHTT-----S-------CEEEEECSSEEEE
T ss_pred CcHHHHHHHHHhhcccccccccCCCCCC---CEEEEECCCcchHHHHHHHHHHC-----C-------CEEEEEeCchHHH
Confidence 344555666666 5667777 9999999995 588888887653 3 3699999875544
Q ss_pred CCCC-CCChhhhccccccCCCCCcccC--CCHHHHhcccCCcEEEeecCCCCC-CCHHHHHHhhhcCCCCCeEEecCCCC
Q 007499 370 KERK-NLDPAAAPFAKDPGDFMGLREG--ASLLEVVRKVKPHVLLGLSGVGGV-FNEEVLKAMRESDSVKPAIFAMSNPT 445 (601)
Q Consensus 370 ~~r~-~l~~~k~~fa~~~~~~~~~~~~--~~L~e~V~~vkptvLIG~S~~~g~-Ft~evv~~Ma~~~~erPIIFaLSNPt 445 (601)
..|. .+... ++.... .... .+|.++++. .|++|++.+.++. +|.++|+ +.-+|+=++-|-
T Consensus 215 ~~ra~~la~~----~~~~t~---~~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk-------~GavVIDVgi~r 278 (320)
T 1edz_A 215 FTRGESLKLN----KHHVED---LGEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK-------EGAVCINFACTK 278 (320)
T ss_dssp EESCCCSSCC----CCEEEE---EEECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC-------TTEEEEECSSSC
T ss_pred HhHHHHHhhh----cccccc---cccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC-------CCeEEEEcCCCc
Confidence 4432 22210 111000 0001 469999998 8999999999987 9998864 234666666654
No 27
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=94.38 E-value=0.046 Score=56.02 Aligned_cols=97 Identities=14% Similarity=0.294 Sum_probs=74.1
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcch-HHHHHHHHHHHHHHHhc-CCChhhhcCeEEEEecCccccCCCC
Q 007499 296 GTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMA-GNNDAFARNKFFLLDKDGLITKERK 373 (601)
Q Consensus 296 GTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGs-Ag~GiA~ll~~~~~~~~-Gls~eeA~~~i~lvD~~GLi~~~r~ 373 (601)
+-.-+|-.|++-.++..+.+++. .++|++|+|. .|.-+|.++... . | ..+++++|+
T Consensus 136 ~~~PcTp~gi~~ll~~~~i~l~g---k~vvVvG~s~iVG~p~A~lL~~~----g~~-------atVtv~h~~-------- 193 (281)
T 2c2x_A 136 APLPCTPRGIVHLLRRYDISIAG---AHVVVIGRGVTVGRPLGLLLTRR----SEN-------ATVTLCHTG-------- 193 (281)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTT---CEEEEECCCTTTHHHHHHHHTST----TTC-------CEEEEECTT--------
T ss_pred CCCCChHHHHHHHHHHcCCCCCC---CEEEEECCCcHHHHHHHHHHhcC----CCC-------CEEEEEECc--------
Confidence 44556778899999999988888 9999999996 588887777541 1 2 367877542
Q ss_pred CCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCC
Q 007499 374 NLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNP 444 (601)
Q Consensus 374 ~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNP 444 (601)
..+|.+.+++ .|++|+..+.|+.+|+++|+ +.-+|+=++-|
T Consensus 194 ---------------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDVgi~ 234 (281)
T 2c2x_A 194 ---------------------TRDLPALTRQ--ADIVVAAVGVAHLLTADMVR-------PGAAVIDVGVS 234 (281)
T ss_dssp ---------------------CSCHHHHHTT--CSEEEECSCCTTCBCGGGSC-------TTCEEEECCEE
T ss_pred ---------------------hhHHHHHHhh--CCEEEECCCCCcccCHHHcC-------CCcEEEEccCC
Confidence 1358899988 89999999999999998875 24577777655
No 28
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=94.37 E-value=0.69 Score=48.68 Aligned_cols=166 Identities=19% Similarity=0.201 Sum_probs=104.6
Q ss_pred CChhhhhHhHHHHHHHHHHhCCCeE-EeeCCCChH--HHHHHHHhcc--CC-cc---ccCcchhHHHHHHHHHHHHHHhC
Q 007499 243 LEGEEYLSIVDEFMEAVHARWPKAI-FEDFQMKWA--FETLERYRKR--FC-MF---NDDIQGTAGVALAGLLGTVRAQG 313 (601)
Q Consensus 243 ~~g~~Y~~~vdefv~av~~~~P~~l-~EDf~~~~A--f~iL~ryr~~--~~-~F---nDDiQGTaav~LAgll~Alr~~g 313 (601)
++..+-++++..|.+++..+....+ =+|++..-. --+.++|+-- -| .+ .|=-.-||-=+.-++-.+++..|
T Consensus 90 ~s~~~~e~~~r~~~~~~~~l~g~~ipa~D~gt~~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G 169 (355)
T 1c1d_A 90 IDPSTWARILRIHAENIDKLSGNYWTGPDVNTNSADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHRG 169 (355)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTTSEEEEECTTCCHHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred cChhhHHHHHHHHHHHHHHhcCCcccCCCCCCCHHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 3335566788889998888874566 999976432 1234444411 11 11 11112355555666777888888
Q ss_pred C-CCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCc
Q 007499 314 L-SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGL 392 (601)
Q Consensus 314 ~-~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~ 392 (601)
. .|+. .+|+|.|.|..|..+|+.+... |. ++++.|++- ....|++...
T Consensus 170 ~~~L~G---ktV~I~G~GnVG~~~A~~l~~~-----Ga-------kVvvsD~~~-----------~~~~~a~~~g----- 218 (355)
T 1c1d_A 170 LGSLDG---LTVLVQGLGAVGGSLASLAAEA-----GA-------QLLVADTDT-----------ERVAHAVALG----- 218 (355)
T ss_dssp CCCSTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCH-----------HHHHHHHHTT-----
T ss_pred CCCCCC---CEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEeCCc-----------cHHHHHHhcC-----
Confidence 7 6777 9999999999999999887653 43 677888741 1122322110
Q ss_pred ccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007499 393 REGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 446 (601)
Q Consensus 393 ~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN-Pt~ 446 (601)
....++.|+.+ ++.|+|+=+. ..+.++++-++.| +-.||.--+| |+.
T Consensus 219 a~~v~~~ell~-~~~DIliP~A-~~~~I~~~~~~~l-----k~~iVie~AN~p~t 266 (355)
T 1c1d_A 219 HTAVALEDVLS-TPCDVFAPCA-MGGVITTEVARTL-----DCSVVAGAANNVIA 266 (355)
T ss_dssp CEECCGGGGGG-CCCSEEEECS-CSCCBCHHHHHHC-----CCSEECCSCTTCBC
T ss_pred CEEeChHHhhc-CccceecHhH-HHhhcCHHHHhhC-----CCCEEEECCCCCCC
Confidence 01123444443 4689999554 5789999999999 2468888887 653
No 29
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=94.25 E-value=1.6 Score=47.43 Aligned_cols=184 Identities=11% Similarity=0.113 Sum_probs=120.2
Q ss_pred CCCChhhhhHhHHHHHHHHHHhC-CCe-E-EeeCCCChHH--HHHHHHh---ccC-Ccc----------ccCcchhHHHH
Q 007499 241 PRLEGEEYLSIVDEFMEAVHARW-PKA-I-FEDFQMKWAF--ETLERYR---KRF-CMF----------NDDIQGTAGVA 301 (601)
Q Consensus 241 ~R~~g~~Y~~~vdefv~av~~~~-P~~-l-~EDf~~~~Af--~iL~ryr---~~~-~~F----------nDDiQGTaav~ 301 (601)
+..+..|-..|...||..+.+.. |.. + -.|++..-.- -+.+.|+ ... +|| .+.-..||-=+
T Consensus 139 k~~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv 218 (450)
T 4fcc_A 139 KGKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGL 218 (450)
T ss_dssp TTCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeH
Confidence 34577788889999999987766 655 4 8888754321 1344443 332 232 23333477777
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhc
Q 007499 302 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAP 381 (601)
Q Consensus 302 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~ 381 (601)
.-++-.+++..|.+|+. .||+|-|.|..|...|+.|.+. |- +=|-+-|++|-|++.. .++..+..
T Consensus 219 ~~~~~~~~~~~~~~l~G---k~vaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~i~d~~-Gid~e~l~ 283 (450)
T 4fcc_A 219 VYFTEAMLKRHGMGFEG---MRVSVSGSGNVAQYAIEKAMEF-----GA------RVITASDSSGTVVDES-GFTKEKLA 283 (450)
T ss_dssp HHHHHHHHHHTTCCSTT---CEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEEETTEEEECTT-CCCHHHHH
T ss_pred HHHHHHHHHHcCCCcCC---CEEEEeCCChHHHHHHHHHHhc-----CC------eEEEEecCCceEEeCC-CCCHHHHH
Confidence 77888899999998888 9999999999999999988764 42 4566789999998753 35443321
Q ss_pred cccccCCCCCcccCCCHHH-------------HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007499 382 FAKDPGDFMGLREGASLLE-------------VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 446 (601)
Q Consensus 382 fa~~~~~~~~~~~~~~L~e-------------~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN-Pt~ 446 (601)
...+... .....+.+ -+-.++.|||+=|.. .+..|++-++.+.+ +.-.+|.-=+| |+.
T Consensus 284 ~l~e~k~----~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl-~~~I~~~~a~~L~a--~g~k~IaEgAN~p~t 355 (450)
T 4fcc_A 284 RLIEIKS----SRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCAT-QNELDVDAAHQLIA--NGVKAVAEGANMPTT 355 (450)
T ss_dssp HHHHHHT----STTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSC-TTCBCHHHHHHHHH--TTCCEEECCSSSCBC
T ss_pred HHHHHhc----ccCCccccccccCCcEEecCcccccCCccEEeeccc-cccccHHHHHHHHh--cCceEEecCCCCCCC
Confidence 1100000 00011111 123468999998886 68999999999954 33468887778 653
No 30
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=94.08 E-value=1.4 Score=47.92 Aligned_cols=189 Identities=16% Similarity=0.168 Sum_probs=121.5
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CCe-E-EeeCCCChHH--HHHHHHhcc---CC-cc----------ccCcchhHHHHHH
Q 007499 243 LEGEEYLSIVDEFMEAVHARW-PKA-I-FEDFQMKWAF--ETLERYRKR---FC-MF----------NDDIQGTAGVALA 303 (601)
Q Consensus 243 ~~g~~Y~~~vdefv~av~~~~-P~~-l-~EDf~~~~Af--~iL~ryr~~---~~-~F----------nDDiQGTaav~LA 303 (601)
.+..|...|-..||+.+.+.. |.. + =+|++..-.. -+.+.|+.. .+ |+ ..--.-||-=+.-
T Consensus 145 ~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~ 224 (456)
T 3r3j_A 145 KSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVY 224 (456)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHH
Confidence 456677888888898886554 654 4 8899864321 245666532 21 11 1122346666667
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhc--
Q 007499 304 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAP-- 381 (601)
Q Consensus 304 gll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~-- 381 (601)
++-.+++..|.+|+. .||+|-|.|..|...|+.|.+. |. +=+.+.|++|-|++.. .|+..+..
T Consensus 225 ~~~~~~~~~g~~l~g---~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~-Gld~~~l~~~ 289 (456)
T 3r3j_A 225 FAENVLKDLNDNLEN---KKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN-GFTKEQLNYI 289 (456)
T ss_dssp HHHHHHHTTTCCSTT---CCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT-CCCHHHHHHH
T ss_pred HHHHHHHHcCCCccC---CEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC-CCCHHHHHHH
Confidence 777888888888888 9999999999999999988764 32 3345899999998753 35433221
Q ss_pred -------------cccccCCCCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCCc
Q 007499 382 -------------FAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTMN 447 (601)
Q Consensus 382 -------------fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN-Pt~~ 447 (601)
|+...+... .-.... +-.++.||||=+.. ++..|++-++.+.+ +.-+||.--+| |+.
T Consensus 290 ~~~k~~~~~~v~~~~~~~~~a~-~v~~~~----i~~~~~DI~iPcA~-~~~I~~~na~~l~~--~~ak~V~EgAN~p~T- 360 (456)
T 3r3j_A 290 MDIKNNQRLRLKEYLKYSKTAK-YFENQK----PWNIPCDIAFPCAT-QNEINENDADLFIQ--NKCKMIVEGANMPTH- 360 (456)
T ss_dssp HHHHHTSCCCGGGGGGTCSSCE-EECSCC----GGGSCCSEEEECSC-TTCBCHHHHHHHHH--HTCCEEECCSSSCBC-
T ss_pred HHHHHhcCcchhhhhhcCCCce-EeCCcc----ccccCccEEEeCCC-ccchhhHHHHHHHh--cCCeEEEecCCCCCC-
Confidence 111000000 001122 23568999998886 79999999999842 35689999999 764
Q ss_pred cCCCHHHHhc
Q 007499 448 AECTAADAFK 457 (601)
Q Consensus 448 aE~tpeda~~ 457 (601)
.| +++.+.
T Consensus 361 ~e--A~~iL~ 368 (456)
T 3r3j_A 361 IK--ALHKLK 368 (456)
T ss_dssp TT--HHHHHH
T ss_pred HH--HHHHHH
Confidence 23 555554
No 31
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=94.03 E-value=0.48 Score=51.01 Aligned_cols=179 Identities=19% Similarity=0.215 Sum_probs=117.7
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CCe-E-EeeCCCChH--HHHHHHHhcc---C--Ccc----------ccCcchhHHHHH
Q 007499 243 LEGEEYLSIVDEFMEAVHARW-PKA-I-FEDFQMKWA--FETLERYRKR---F--CMF----------NDDIQGTAGVAL 302 (601)
Q Consensus 243 ~~g~~Y~~~vdefv~av~~~~-P~~-l-~EDf~~~~A--f~iL~ryr~~---~--~~F----------nDDiQGTaav~L 302 (601)
.+..|-..|...|++++.+.- |+. + =+|++..-. --+.+.|+.. . .++ .+.-.-||-=+.
T Consensus 123 ~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 202 (419)
T 3aoe_E 123 LSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGAL 202 (419)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHH
Confidence 345677788999999998876 654 5 899987532 2355666331 1 111 233345666666
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEecCccccCCCCCCChhhh-
Q 007499 303 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPAAA- 380 (601)
Q Consensus 303 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~-lvD~~GLi~~~r~~l~~~k~- 380 (601)
-++-.+++..|.+|+. .||+|.|.|..|...|++|.+. | -+++ +.|++|-|++.. .|+..+.
T Consensus 203 ~~~~~~~~~~g~~l~g---k~vaVqG~GnVG~~~a~~L~~~-----G-------akVVavsD~~G~i~dp~-Gld~~~l~ 266 (419)
T 3aoe_E 203 LVLEALAKRRGLDLRG---ARVVVQGLGQVGAAVALHAERL-----G-------MRVVAVATSMGGMYAPE-GLDVAEVL 266 (419)
T ss_dssp HHHHHHHHHHTCCCTT---CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEEETTEEEECTT-CCCHHHHH
T ss_pred HHHHHHHHhcCCCccC---CEEEEECcCHHHHHHHHHHHHC-----C-------CEEEEEEcCCCeEECCC-CCCHHHHH
Confidence 7788888889998888 9999999999999999888653 4 2566 999999998754 3433221
Q ss_pred ccccccCCCCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007499 381 PFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 446 (601)
Q Consensus 381 ~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN-Pt~ 446 (601)
.+......+.+- . .+-.+ +-.++.|||+=++. ++..|++-.+.+ .-.||.--+| |+.
T Consensus 267 ~~~~~~g~v~~~-~-~~~~e-~~~~~~DVliP~A~-~n~i~~~~A~~l-----~ak~V~EgAN~p~t 324 (419)
T 3aoe_E 267 SAYEATGSLPRL-D-LAPEE-VFGLEAEVLVLAAR-EGALDGDRARQV-----QAQAVVEVANFGLN 324 (419)
T ss_dssp HHHHHHSSCSCC-C-BCTTT-GGGSSCSEEEECSC-TTCBCHHHHTTC-----CCSEEEECSTTCBC
T ss_pred HHHHhhCCccee-e-ccchh-hhccCceEEEeccc-ccccccchHhhC-----CceEEEECCCCcCC
Confidence 111111101000 0 00012 34578999998875 799999999887 3569999998 654
No 32
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=93.88 E-value=0.31 Score=53.34 Aligned_cols=124 Identities=20% Similarity=0.278 Sum_probs=86.7
Q ss_pred cCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCC
Q 007499 292 DDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE 371 (601)
Q Consensus 292 DDiQGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~ 371 (601)
+.+.|+......|+ .+.++..+.. .+++|+|.|..|.++|+.+... |+ +++.+|++..
T Consensus 234 r~~~~~~~~l~~gw---~r~~~~~l~G---ktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~---- 291 (479)
T 1v8b_A 234 DNVYGCRHSLPDGL---MRATDFLISG---KIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPI---- 291 (479)
T ss_dssp HHHHHHHHHHHHHH---HHHHCCCCTT---SEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHH----
T ss_pred hchHhHHHHHhhhh---hhccccccCC---CEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChh----
Confidence 44555555556663 3567877777 9999999999999999998764 32 6888887521
Q ss_pred CCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCC
Q 007499 372 RKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECT 451 (601)
Q Consensus 372 r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~t 451 (601)
... ..+...- ...+|.|+++. .|++|.+....+.++++.++.|. +.-||.=.|.-.. |+.
T Consensus 292 -----~~~-~a~~~g~------~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK----~gailiNvgrg~~--EId 351 (479)
T 1v8b_A 292 -----CAI-QAVMEGF------NVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMK----NNAVVGNIGHFDD--EIQ 351 (479)
T ss_dssp -----HHH-HHHTTTC------EECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCC----TTCEEEECSSTTT--SBC
T ss_pred -----hHH-HHHHcCC------EecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcC----CCcEEEEeCCCCc--ccc
Confidence 000 1111100 12479999987 89999997778999999999993 5678887776544 666
Q ss_pred HHHHhc
Q 007499 452 AADAFK 457 (601)
Q Consensus 452 peda~~ 457 (601)
-++..+
T Consensus 352 ~~aL~~ 357 (479)
T 1v8b_A 352 VNELFN 357 (479)
T ss_dssp HHHHHT
T ss_pred chhhhc
Confidence 666655
No 33
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=93.35 E-value=0.71 Score=50.06 Aligned_cols=181 Identities=15% Similarity=0.183 Sum_probs=117.4
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CCe-E-EeeCCCCh--HHHHHHHHhc---cC--Ccc----------ccCcchhHHHHH
Q 007499 243 LEGEEYLSIVDEFMEAVHARW-PKA-I-FEDFQMKW--AFETLERYRK---RF--CMF----------NDDIQGTAGVAL 302 (601)
Q Consensus 243 ~~g~~Y~~~vdefv~av~~~~-P~~-l-~EDf~~~~--Af~iL~ryr~---~~--~~F----------nDDiQGTaav~L 302 (601)
.+..|-..|...|++++.+.- |+. + =+|++..- ---+.+.|+. .. .++ .+.-.-||-=+.
T Consensus 140 ~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv~ 219 (440)
T 3aog_A 140 LSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTGEREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGVF 219 (440)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHHH
Confidence 345677788999999998877 654 5 88998742 1225566633 11 222 233344666666
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEecCccccCCCCCCChhhh-
Q 007499 303 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPAAA- 380 (601)
Q Consensus 303 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~-lvD~~GLi~~~r~~l~~~k~- 380 (601)
-++-.+++..|.+++. .||+|.|.|..|...|++|.+. | -+++ +.|++|-|++.. .|+....
T Consensus 220 ~~~~~~~~~~g~~l~g---~~vaVqGfGnVG~~~a~~L~e~-----G-------akvVavsD~~G~i~dp~-Gld~~~l~ 283 (440)
T 3aog_A 220 ITAAAAAEKIGLQVEG---ARVAIQGFGNVGNAAARAFHDH-----G-------ARVVAVQDHTGTVYNEA-GIDPYDLL 283 (440)
T ss_dssp HHHHHHHHHHTCCSTT---CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEECSSCEEECTT-CCCHHHHH
T ss_pred HHHHHHHHhcCCCccC---CEEEEeccCHHHHHHHHHHHHC-----C-------CEEEEEEcCCcEEECCC-CCCHHHHH
Confidence 6777888889998888 9999999999999999888763 4 2455 999999988764 2332211
Q ss_pred ccccccCCCCCc--ccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007499 381 PFAKDPGDFMGL--REGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 446 (601)
Q Consensus 381 ~fa~~~~~~~~~--~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN-Pt~ 446 (601)
.+......+.+. ....+-.++ -.++.||||=++. ++..|++-++.+ .-.+|.--+| |+.
T Consensus 284 ~~~~~~g~i~~y~~a~~i~~~ei-~~~~~DIlvPcA~-~n~i~~~na~~l-----~ak~VvEgAN~p~t 345 (440)
T 3aog_A 284 RHVQEFGGVRGYPKAEPLPAADF-WGLPVEFLVPAAL-EKQITEQNAWRI-----RARIVAEGANGPTT 345 (440)
T ss_dssp HHHHHTSSSTTCTTSEECCHHHH-TTCCCSEEEECSS-SSCBCTTTGGGC-----CCSEEECCSSSCBC
T ss_pred HHHHhcCCcccCCCceEcCchhh-hcCCCcEEEecCC-cCccchhhHHHc-----CCcEEEecCccccC
Confidence 111111011000 011234444 4678999998876 788998888877 3578888888 653
No 34
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=93.02 E-value=0.87 Score=49.03 Aligned_cols=180 Identities=17% Similarity=0.186 Sum_probs=105.8
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CCe-E-EeeCCCChH--HHHHHHHhcc---C---Ccc----------ccCcchhHHHH
Q 007499 243 LEGEEYLSIVDEFMEAVHARW-PKA-I-FEDFQMKWA--FETLERYRKR---F---CMF----------NDDIQGTAGVA 301 (601)
Q Consensus 243 ~~g~~Y~~~vdefv~av~~~~-P~~-l-~EDf~~~~A--f~iL~ryr~~---~---~~F----------nDDiQGTaav~ 301 (601)
.+..|-..|...|++++.+.- |.. + =+|++..-. --+.+.|+.. . .++ .+.-.-||-=+
T Consensus 116 ~s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv 195 (421)
T 2yfq_A 116 LSERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGV 195 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHH
Confidence 345667788999999998877 654 5 899997532 2356677532 1 122 22223466666
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEecC-----ccccCCCCCC
Q 007499 302 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKD-----GLITKERKNL 375 (601)
Q Consensus 302 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~-lvD~~-----GLi~~~r~~l 375 (601)
.-++-.+++..|.+++. .||+|.|.|..|...|++|.+ .|. +++ +.|++ |-|++.. .|
T Consensus 196 ~~~~~~~~~~~g~~l~g---~~vaVqG~GnVG~~~a~~L~~-----~Ga-------kvVavsD~~~~~~~G~i~d~~-Gl 259 (421)
T 2yfq_A 196 AVVVRESAKRFGIKMED---AKIAVQGFGNVGTFTVKNIER-----QGG-------KVCAIAEWDRNEGNYALYNEN-GI 259 (421)
T ss_dssp HHHHHHHHHHTTCCGGG---SCEEEECCSHHHHHHHHHHHH-----TTC-------CEEECCBCCSSSCSBCCBCSS-CC
T ss_pred HHHHHHHHHhcCCCccC---CEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEEecCCCccceEEECCC-CC
Confidence 66777888888988777 999999999999999988875 342 455 89999 9998754 34
Q ss_pred Chhhh-ccccccCCCCCc--ccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CC
Q 007499 376 DPAAA-PFAKDPGDFMGL--REGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PT 445 (601)
Q Consensus 376 ~~~k~-~fa~~~~~~~~~--~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN-Pt 445 (601)
+.... .+......+.+. ....+-.+ +-.++.||||=+.. ++..|++-.+.+ ...+|.--+| |+
T Consensus 260 d~~~l~~~~~~~g~i~~~~~a~~i~~~~-~~~~~~DIliP~A~-~n~i~~~~A~~l-----~ak~VvEgAN~P~ 326 (421)
T 2yfq_A 260 DFKELLAYKEANKTLIGFPGAERITDEE-FWTKEYDIIVPAAL-ENVITGERAKTI-----NAKLVCEAANGPT 326 (421)
T ss_dssp CHHHHHHHHHHHCC----------------------CEEECSC-SSCSCHHHHTTC-----CCSEEECCSSSCS
T ss_pred CHHHHHHHHHhcCCcccCCCceEeCccc-hhcCCccEEEEcCC-cCcCCcccHHHc-----CCeEEEeCCcccc
Confidence 32211 111110000000 00011122 23456788887664 677888777766 3556666666 54
No 35
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=92.54 E-value=0.28 Score=53.87 Aligned_cols=111 Identities=20% Similarity=0.260 Sum_probs=77.2
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCC
Q 007499 296 GTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNL 375 (601)
Q Consensus 296 GTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l 375 (601)
|+......|+ .+.+|..+.. .+++|+|.|..|.++|+.+... |+ +++.+|++..
T Consensus 258 ~~~~~l~~gw---~~~~g~~L~G---ktVgIIG~G~IG~~vA~~l~~~-----G~-------~V~v~d~~~~-------- 311 (494)
T 3d64_A 258 GCRESLVDGI---KRATDVMIAG---KIAVVAGYGDVGKGCAQSLRGL-----GA-------TVWVTEIDPI-------- 311 (494)
T ss_dssp HHHTTHHHHH---HHHHCCCCTT---CEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSCHH--------
T ss_pred hhhhhhhhhh---hhccccccCC---CEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCChH--------
Confidence 3443444552 3567887777 9999999999999999988643 42 6888887521
Q ss_pred ChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 376 DPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 376 ~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
... ....... ...+|.|+++. .|+++.+....+.++++.++.|. +.-||.=.|....
T Consensus 312 -~~~-~a~~~G~------~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK----~gAilINvgrg~v 368 (494)
T 3d64_A 312 -CAL-QAAMEGY------RVVTMEYAADK--ADIFVTATGNYHVINHDHMKAMR----HNAIVCNIGHFDS 368 (494)
T ss_dssp -HHH-HHHTTTC------EECCHHHHTTT--CSEEEECSSSSCSBCHHHHHHCC----TTEEEEECSSSSC
T ss_pred -hHH-HHHHcCC------EeCCHHHHHhc--CCEEEECCCcccccCHHHHhhCC----CCcEEEEcCCCcc
Confidence 000 0001100 12479999987 89999987778999999999993 4678887777543
No 36
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.49 E-value=0.51 Score=46.95 Aligned_cols=32 Identities=19% Similarity=0.249 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCC
Confidence 6899999999999999988753 43 68888875
No 37
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=92.33 E-value=0.34 Score=48.69 Aligned_cols=99 Identities=15% Similarity=0.228 Sum_probs=66.2
Q ss_pred HHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCC
Q 007499 310 RAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDF 389 (601)
Q Consensus 310 r~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~ 389 (601)
+..+..+.. .+++|+|+|..|..+|+.+... |. +++.+|+.- .+ +...+ .+ ....
T Consensus 149 ~~~~~~l~g---~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~d~~~----~~--~~~~~-~~---g~~~ 203 (300)
T 2rir_A 149 QHTDYTIHG---SQVAVLGLGRTGMTIARTFAAL-----GA-------NVKVGARSS----AH--LARIT-EM---GLVP 203 (300)
T ss_dssp HTCSSCSTT---SEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSH----HH--HHHHH-HT---TCEE
T ss_pred HhcCCCCCC---CEEEEEcccHHHHHHHHHHHHC-----CC-------EEEEEECCH----HH--HHHHH-HC---CCeE
Confidence 445666666 9999999999999999887643 42 688898752 00 11000 01 0000
Q ss_pred CCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 007499 390 MGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 443 (601)
Q Consensus 390 ~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN 443 (601)
....+|.|+++. .|++|-+.. .+.++++.++.|. +..+|+=+|.
T Consensus 204 ---~~~~~l~~~l~~--aDvVi~~~p-~~~i~~~~~~~mk----~g~~lin~a~ 247 (300)
T 2rir_A 204 ---FHTDELKEHVKD--IDICINTIP-SMILNQTVLSSMT----PKTLILDLAS 247 (300)
T ss_dssp ---EEGGGHHHHSTT--CSEEEECCS-SCCBCHHHHTTSC----TTCEEEECSS
T ss_pred ---EchhhHHHHhhC--CCEEEECCC-hhhhCHHHHHhCC----CCCEEEEEeC
Confidence 012468888876 899997654 5899999998883 5678888886
No 38
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=91.87 E-value=0.18 Score=51.40 Aligned_cols=49 Identities=16% Similarity=0.309 Sum_probs=39.8
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 303 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 303 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.|++.+++..|.+++. .+++|+|||.+|.+++..|.. .|. ++|+++++.
T Consensus 107 ~G~~~~L~~~~~~~~~---k~vlvlGaGGaaraia~~L~~-----~G~------~~v~v~nRt 155 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKN---NICVVLGSGGAARAVLQYLKD-----NFA------KDIYVVTRN 155 (282)
T ss_dssp HHHHHHHHHTTCCCTT---SEEEEECSSTTHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HHHHHHHHHcCCCccC---CEEEEECCcHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 6789999988888877 999999999888888777654 353 579999884
No 39
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=91.76 E-value=0.74 Score=50.46 Aligned_cols=109 Identities=18% Similarity=0.243 Sum_probs=74.8
Q ss_pred HHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCC
Q 007499 310 RAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDF 389 (601)
Q Consensus 310 r~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~ 389 (601)
|.++..+.. .+|+|+|+|..|.++|..+... |. +++.+|++ +.+...|+...
T Consensus 266 r~~~~~l~G---ktV~IiG~G~IG~~~A~~lka~-----Ga-------~Viv~d~~-----------~~~~~~A~~~G-- 317 (494)
T 3ce6_A 266 RGTDALIGG---KKVLICGYGDVGKGCAEAMKGQ-----GA-------RVSVTEID-----------PINALQAMMEG-- 317 (494)
T ss_dssp HHHCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC-----------HHHHHHHHHTT--
T ss_pred hccCCCCCc---CEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCC-----------HHHHHHHHHcC--
Confidence 445656666 9999999999999998877643 42 68888874 12222222110
Q ss_pred CCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhc
Q 007499 390 MGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFK 457 (601)
Q Consensus 390 ~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~ 457 (601)
....++.|+++. .|++|-+++..+.++++.++.|. +.-+|.-.+.... |+..+..+.
T Consensus 318 ---a~~~~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk----~ggilvnvG~~~~--eId~~aL~~ 374 (494)
T 3ce6_A 318 ---FDVVTVEEAIGD--ADIVVTATGNKDIIMLEHIKAMK----DHAILGNIGHFDN--EIDMAGLER 374 (494)
T ss_dssp ---CEECCHHHHGGG--CSEEEECSSSSCSBCHHHHHHSC----TTCEEEECSSSGG--GBCHHHHHH
T ss_pred ---CEEecHHHHHhC--CCEEEECCCCHHHHHHHHHHhcC----CCcEEEEeCCCCC--ccCHHHHHH
Confidence 012468888876 89999988888999999999993 4667777777543 666555443
No 40
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=91.74 E-value=0.2 Score=50.79 Aligned_cols=92 Identities=18% Similarity=0.175 Sum_probs=55.0
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhcc
Q 007499 303 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPF 382 (601)
Q Consensus 303 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~f 382 (601)
.|++.+++..+..++. .+++|+|||.+|.+++..|.. .|. ++|+++|++ .++ .......+
T Consensus 112 ~G~~~~l~~~~~~l~~---k~vlVlGaGG~g~aia~~L~~-----~G~------~~v~i~~R~----~~~--a~~la~~~ 171 (283)
T 3jyo_A 112 SGFGRGMEEGLPNAKL---DSVVQVGAGGVGNAVAYALVT-----HGV------QKLQVADLD----TSR--AQALADVI 171 (283)
T ss_dssp HHHHHHHHHHCTTCCC---SEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSS----HHH--HHHHHHHH
T ss_pred HHHHHHHHHhCcCcCC---CEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEECC----HHH--HHHHHHHH
Confidence 5688888888877777 999999999776666665554 454 579999884 111 11111111
Q ss_pred ccccCCCCC-cccCCCHHHHhcccCCcEEEeecCC
Q 007499 383 AKDPGDFMG-LREGASLLEVVRKVKPHVLLGLSGV 416 (601)
Q Consensus 383 a~~~~~~~~-~~~~~~L~e~V~~vkptvLIG~S~~ 416 (601)
........- .....+|.++++. +|++|-++..
T Consensus 172 ~~~~~~~~i~~~~~~~l~~~l~~--~DiVInaTp~ 204 (283)
T 3jyo_A 172 NNAVGREAVVGVDARGIEDVIAA--ADGVVNATPM 204 (283)
T ss_dssp HHHHTSCCEEEECSTTHHHHHHH--SSEEEECSST
T ss_pred HhhcCCceEEEcCHHHHHHHHhc--CCEEEECCCC
Confidence 111000000 0012368888887 8999987753
No 41
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=91.68 E-value=1 Score=47.38 Aligned_cols=138 Identities=22% Similarity=0.327 Sum_probs=75.1
Q ss_pred ChHHHHHHHHhccCCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChh
Q 007499 274 KWAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDA 353 (601)
Q Consensus 274 ~~Af~iL~ryr~~~~~FnDDiQGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~e 353 (601)
..++.+-++.+....+. .++.+++.+++--+-+..+ .+.. .+|+|+|+|..|..++..+... |.
T Consensus 128 ~~a~~~~k~v~~~~~~~----~~~~s~a~~av~~a~~~~~-~l~g---~~VlIiGaG~iG~~~a~~l~~~-----G~--- 191 (404)
T 1gpj_A 128 RRAINLGKRAREETRIS----EGAVSIGSAAVELAERELG-SLHD---KTVLVVGAGEMGKTVAKSLVDR-----GV--- 191 (404)
T ss_dssp HHHHHHHHHHHHHSSTT----CSCCSHHHHHHHHHHHHHS-CCTT---CEEEEESCCHHHHHHHHHHHHH-----CC---
T ss_pred HHHhhhhccCcchhhhc----CCCccHHHHHHHHHHHHhc-cccC---CEEEEEChHHHHHHHHHHHHHC-----CC---
Confidence 34777777766543221 1222233333222222222 3455 9999999999998888877643 53
Q ss_pred hhcCeEEEEecCccccCCCCCCChhhhcccccc-CCCCCcccCCCHHHHhcccCCcEEEeecCCC-CCCCHHHHHH--hh
Q 007499 354 FARNKFFLLDKDGLITKERKNLDPAAAPFAKDP-GDFMGLREGASLLEVVRKVKPHVLLGLSGVG-GVFNEEVLKA--MR 429 (601)
Q Consensus 354 eA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~-~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~-g~Ft~evv~~--Ma 429 (601)
++|+++|+.. .+ . ..+++.- .+. -...++.++++. .|++|-+++.+ ..++++.++. |.
T Consensus 192 ---~~V~v~~r~~----~r--a----~~la~~~g~~~---~~~~~l~~~l~~--aDvVi~at~~~~~~~~~~~l~~~~lk 253 (404)
T 1gpj_A 192 ---RAVLVANRTY----ER--A----VELARDLGGEA---VRFDELVDHLAR--SDVVVSATAAPHPVIHVDDVREALRK 253 (404)
T ss_dssp ---SEEEEECSSH----HH--H----HHHHHHHTCEE---CCGGGHHHHHHT--CSEEEECCSSSSCCBCHHHHHHHHHH
T ss_pred ---CEEEEEeCCH----HH--H----HHHHHHcCCce---ecHHhHHHHhcC--CCEEEEccCCCCceecHHHHHHHHHh
Confidence 4799888741 11 1 1222210 000 012357888865 89999876544 4567888887 42
Q ss_pred hcCCCCCeEEecCCCC
Q 007499 430 ESDSVKPAIFAMSNPT 445 (601)
Q Consensus 430 ~~~~erPIIFaLSNPt 445 (601)
.+...+-+++-++.|.
T Consensus 254 ~r~~~~~v~vdia~P~ 269 (404)
T 1gpj_A 254 RDRRSPILIIDIANPR 269 (404)
T ss_dssp CSSCCCEEEEECCSSC
T ss_pred ccCCCCEEEEEccCCC
Confidence 1122334556666554
No 42
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=91.64 E-value=0.21 Score=51.61 Aligned_cols=57 Identities=18% Similarity=0.347 Sum_probs=42.3
Q ss_pred CCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 287 FCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 287 ~~~FnDDiQGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
+.-+|-| -.|++.+++..+..++. .+++|+|||.+|.+||..|.. .|. ++|+++++.
T Consensus 131 l~G~NTD--------~~Gf~~~L~~~~~~l~g---k~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~ 187 (315)
T 3tnl_A 131 LTGHITD--------GTGYMRALKEAGHDIIG---KKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRK 187 (315)
T ss_dssp EEEECCH--------HHHHHHHHHHTTCCCTT---SEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred EEEeCCC--------HHHHHHHHHHcCCCccC---CEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECC
Confidence 4446666 35688888888888777 999999999776666666554 454 579999885
No 43
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=91.51 E-value=0.21 Score=51.55 Aligned_cols=49 Identities=20% Similarity=0.460 Sum_probs=37.7
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 303 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 303 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.|++.+++..+..++. .+++|+|||.+|.+|+..|.. .|. ++|+++++.
T Consensus 133 ~Gf~~~L~~~~~~l~g---k~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt 181 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRG---KTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK 181 (312)
T ss_dssp HHHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHhcCCCcCC---CEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC
Confidence 4578888877887777 999999999777777666654 454 579999884
No 44
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=91.28 E-value=0.23 Score=50.23 Aligned_cols=47 Identities=26% Similarity=0.501 Sum_probs=38.3
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 304 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 304 gll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
|++.+++..|.+++. .|++++|||-|+.+|+-.|.+ .|. ++|+++++
T Consensus 111 Gf~~~L~~~g~~~~~---~~~lilGaGGaarai~~aL~~-----~g~------~~i~i~nR 157 (269)
T 3tum_A 111 GFLGAAHKHGFEPAG---KRALVIGCGGVGSAIAYALAE-----AGI------ASITLCDP 157 (269)
T ss_dssp HHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred HHHHHHHHhCCCccc---CeEEEEecHHHHHHHHHHHHH-----hCC------CeEEEeCC
Confidence 467888888888888 999999999999888776654 443 57999987
No 45
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.22 E-value=0.21 Score=51.92 Aligned_cols=100 Identities=24% Similarity=0.330 Sum_probs=61.5
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCH
Q 007499 319 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 398 (601)
Q Consensus 319 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L 398 (601)
+...+++|+|||.+|.+++..+.. .| | +++++|++- . .+...+..++....-.. ....++
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~-----~G-----a--~V~v~dr~~----~--r~~~~~~~~~~~~~~~~--~~~~~~ 224 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVG-----LG-----A--QVQIFDINV----E--RLSYLETLFGSRVELLY--SNSAEI 224 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH-----TT-----C--EEEEEESCH----H--HHHHHHHHHGGGSEEEE--CCHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CC-----C--EEEEEeCCH----H--HHHHHHHhhCceeEeee--CCHHHH
Confidence 445999999999999998887764 34 2 688898741 1 12112222222100000 011246
Q ss_pred HHHhcccCCcEEEeecCCCCC-----CCHHHHHHhhhcCCCCCeEEecCCC
Q 007499 399 LEVVRKVKPHVLLGLSGVGGV-----FNEEVLKAMRESDSVKPAIFAMSNP 444 (601)
Q Consensus 399 ~e~V~~vkptvLIG~S~~~g~-----Ft~evv~~Ma~~~~erPIIFaLSNP 444 (601)
.+.++. .|++|.+++.++. ++++.++.|. +.-+|+-++.+
T Consensus 225 ~~~~~~--~DvVI~~~~~~~~~~~~li~~~~~~~~~----~g~~ivdv~~~ 269 (361)
T 1pjc_A 225 ETAVAE--ADLLIGAVLVPGRRAPILVPASLVEQMR----TGSVIVDVAVD 269 (361)
T ss_dssp HHHHHT--CSEEEECCCCTTSSCCCCBCHHHHTTSC----TTCEEEETTCT
T ss_pred HHHHcC--CCEEEECCCcCCCCCCeecCHHHHhhCC----CCCEEEEEecC
Confidence 777765 8999998876553 5888888883 45577777753
No 46
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=91.12 E-value=0.21 Score=50.67 Aligned_cols=50 Identities=28% Similarity=0.402 Sum_probs=38.1
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 302 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 302 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
-.|++.+++..|.+++. .+++|+|||.+|.+++..|.. .|. ++|+++++.
T Consensus 110 ~~G~~~~L~~~~~~l~~---k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~ 159 (281)
T 3o8q_A 110 GEGLVQDLLAQQVLLKG---ATILLIGAGGAARGVLKPLLD-----QQP------ASITVTNRT 159 (281)
T ss_dssp HHHHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHT-----TCC------SEEEEEESS
T ss_pred HHHHHHHHHHhCCCccC---CEEEEECchHHHHHHHHHHHh-----cCC------CeEEEEECC
Confidence 35688888888887777 999999999777776666543 454 479999884
No 47
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.85 E-value=0.21 Score=50.76 Aligned_cols=49 Identities=16% Similarity=0.410 Sum_probs=37.7
Q ss_pred HHHHHHHHHhC-CCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 303 AGLLGTVRAQG-LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 303 Agll~Alr~~g-~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.|++.+++..+ ..+.. .+++|+|||.+|.++|..|.. .|. ++|+++|+.
T Consensus 125 ~G~~~~l~~~~~~~l~~---~~vlVlGaGg~g~aia~~L~~-----~G~------~~V~v~nR~ 174 (297)
T 2egg_A 125 LGYVQALEEEMNITLDG---KRILVIGAGGGARGIYFSLLS-----TAA------ERIDMANRT 174 (297)
T ss_dssp HHHHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECSS
T ss_pred HHHHHHHHHhCCCCCCC---CEEEEECcHHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 67788888777 66666 999999999888887776654 353 479998884
No 48
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=90.52 E-value=0.14 Score=51.91 Aligned_cols=57 Identities=18% Similarity=0.298 Sum_probs=42.3
Q ss_pred CCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 287 FCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 287 ~~~FnDDiQGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
+.-+|-|- .|++.+++..+.+++. .+++|+|||.+|.+++..|.. .|. ++|++++++
T Consensus 94 l~G~NTD~--------~G~~~~L~~~~~~l~~---k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~ 150 (277)
T 3don_A 94 WIGYNTDG--------IGYVNGLKQIYEGIED---AYILILGAGGASKGIANELYK-----IVR------PTLTVANRT 150 (277)
T ss_dssp EEEECCHH--------HHHHHHHHHHSTTGGG---CCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSC
T ss_pred EEEECChH--------HHHHHHHHHhCCCcCC---CEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 55566663 3477788888887777 999999999777777766654 454 478888885
No 49
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=90.50 E-value=0.25 Score=51.01 Aligned_cols=108 Identities=15% Similarity=0.182 Sum_probs=65.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCC-CCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.||.|+|||+.|.++|.+|... |+ -+++++|.+-=..+. ..++.+...++..+ .. .....++.+
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~------~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~-~~---i~~t~d~~e 74 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----EL------ADVVLYDVVKGMPEGKALDLSHVTSVVDTN-VS---VRAEYSYEA 74 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSSSHHHHHHHHHHHHHHHTTCC-CC---EEEECSHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECChhHHHHHHHHHHhhhhccCCC-CE---EEEeCCHHH
Confidence 5899999999999999888753 43 149999986210000 01111111111111 00 011367988
Q ss_pred HhcccCCcEEEeecCCC---CC----------------CCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 007499 401 VVRKVKPHVLLGLSGVG---GV----------------FNEEVLKAMRESDSVKPAIFAMSNPTMN 447 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~---g~----------------Ft~evv~~Ma~~~~erPIIFaLSNPt~~ 447 (601)
++++ .|++|=+.+.| |. .-+++.+.|.+ +++.-+|+=.|||...
T Consensus 75 a~~~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~vi~~tNP~~~ 137 (331)
T 1pzg_A 75 ALTG--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKK-YCPKTFIIVVTNPLDC 137 (331)
T ss_dssp HHTT--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHHH
T ss_pred HhCC--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCcEEEEEcCchHH
Confidence 9988 79887554333 33 13677888854 7888888888999873
No 50
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=90.36 E-value=1.2 Score=47.35 Aligned_cols=200 Identities=17% Similarity=0.115 Sum_probs=114.9
Q ss_pred cCCccccCc---chhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEE
Q 007499 286 RFCMFNDDI---QGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLL 362 (601)
Q Consensus 286 ~~~~FnDDi---QGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lv 362 (601)
.+.+.|.-- +.+|=-+++.+|+..|..|..|.+ .+|.|+|.|..|-.+|+.+... |+ +++.+
T Consensus 81 gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g---~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~ 145 (380)
T 2o4c_A 81 GIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAE---RTYGVVGAGQVGGRLVEVLRGL-----GW-------KVLVC 145 (380)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGG---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEE
T ss_pred CCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCC---CEEEEEeCCHHHHHHHHHHHHC-----CC-------EEEEE
Confidence 355555432 234555899999999999988777 9999999999999999988753 43 68888
Q ss_pred ecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeec---C-----CCCCCCHHHHHHhhhcCCC
Q 007499 363 DKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS---G-----VGGVFNEEVLKAMRESDSV 434 (601)
Q Consensus 363 D~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S---~-----~~g~Ft~evv~~Ma~~~~e 434 (601)
|+..- ... .. ....+|.|+++. .|+++=+- . ..+.|+++.++.|. +
T Consensus 146 d~~~~-----------~~~---~g------~~~~~l~ell~~--aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk----~ 199 (380)
T 2o4c_A 146 DPPRQ-----------ARE---PD------GEFVSLERLLAE--ADVISLHTPLNRDGEHPTRHLLDEPRLAALR----P 199 (380)
T ss_dssp CHHHH-----------HHS---TT------SCCCCHHHHHHH--CSEEEECCCCCSSSSSCCTTSBCHHHHHTSC----T
T ss_pred cCChh-----------hhc---cC------cccCCHHHHHHh--CCEEEEeccCccccccchhhhcCHHHHhhCC----C
Confidence 87421 000 00 012579999987 79887532 1 34789999999993 4
Q ss_pred CCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCceecCCCeeeecccccccccchhhHHHHHHcCCcccCHHHHH
Q 007499 435 KPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQ 514 (601)
Q Consensus 435 rPIIFaLSNPt~~aE~tpeda~~wt~Grai~AsGSPf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~itd~m~~ 514 (601)
..++.=.|+-..--|-.-.+|+ .+|+..-|.=-=|++-...+.. .. + +|..+-|=++-.... --..|..
T Consensus 200 gailIN~sRG~vvd~~aL~~aL--~~g~i~~A~LDV~~~EP~~~~~-l~--~-~nvi~TPHiag~t~e-----~~~~~~~ 268 (380)
T 2o4c_A 200 GTWLVNASRGAVVDNQALRRLL--EGGADLEVALDVWEGEPQADPE-LA--A-RCLIATPHIAGYSLE-----GKLRGTA 268 (380)
T ss_dssp TEEEEECSCGGGBCHHHHHHHH--HTTCCEEEEESCCTTTTSCCHH-HH--T-TCSEECSSCTTCCHH-----HHHHHHH
T ss_pred CcEEEECCCCcccCHHHHHHHH--HhCCCceEEeeeeccCCCCchh-hc--c-CCEEEccccCcCCHH-----HHHHHHH
Confidence 6688777753321222222333 3565443321111100000111 11 1 478888877521111 1234555
Q ss_pred HHHHHHhccCCCCC-CCCCccccC
Q 007499 515 QAAECLASYMTDEE-IPKGILYPS 537 (601)
Q Consensus 515 aAA~aLA~~v~~~~-l~~g~l~P~ 537 (601)
.+++.|......+. ..-..++|.
T Consensus 269 ~~~~nl~~~l~g~~~~~~~~~~p~ 292 (380)
T 2o4c_A 269 QIYQAYCAWRGIAERVSLQDVLPE 292 (380)
T ss_dssp HHHHHHHHHHTCCCCCCGGGTCCC
T ss_pred HHHHHHHHHHcCCCccchhhcCCC
Confidence 56666666654332 222345554
No 51
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=90.33 E-value=0.21 Score=50.33 Aligned_cols=49 Identities=31% Similarity=0.525 Sum_probs=36.9
Q ss_pred HHHHHH-HHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 303 AGLLGT-VRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 303 Agll~A-lr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.|++.+ ++..|.+++. .+++|+|||.+|.+++..|.+ .|. ++|+++++.
T Consensus 104 ~G~~~~lL~~~~~~l~~---k~~lvlGaGg~~~aia~~L~~-----~G~------~~v~i~~R~ 153 (272)
T 3pwz_A 104 IGLLRDIEENLGEPLRN---RRVLLLGAGGAVRGALLPFLQ-----AGP------SELVIANRD 153 (272)
T ss_dssp HHHHHHHHTTSCCCCTT---SEEEEECCSHHHHHHHHHHHH-----TCC------SEEEEECSC
T ss_pred HHHHHHHHHHcCCCccC---CEEEEECccHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 468888 8777777777 999999999777776666554 454 479988874
No 52
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=90.32 E-value=1.1 Score=47.53 Aligned_cols=137 Identities=16% Similarity=0.162 Sum_probs=92.3
Q ss_pred CCccccCc---chhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEe
Q 007499 287 FCMFNDDI---QGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD 363 (601)
Q Consensus 287 ~~~FnDDi---QGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD 363 (601)
+.+.|.-- +.+|=-+++.+|+..|..|..|.. .+|.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 85 I~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~g---ktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d 149 (381)
T 3oet_A 85 IGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRD---RTIGIVGVGNVGSRLQTRLEAL-----GI-------RTLLCD 149 (381)
T ss_dssp CEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGG---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEC
T ss_pred EEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCC---CEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEEC
Confidence 55555432 345556899999999999988877 9999999999999999998754 43 688888
Q ss_pred cCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecC--------CCCCCCHHHHHHhhhcCCCC
Q 007499 364 KDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG--------VGGVFNEEVLKAMRESDSVK 435 (601)
Q Consensus 364 ~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~--------~~g~Ft~evv~~Ma~~~~er 435 (601)
+..- ... .. ....+|.|+++. .|+++=.-- ..+.|+++.++.|. +.
T Consensus 150 ~~~~-----------~~~---~~------~~~~sl~ell~~--aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk----~g 203 (381)
T 3oet_A 150 PPRA-----------ARG---DE------GDFRTLDELVQE--ADVLTFHTPLYKDGPYKTLHLADETLIRRLK----PG 203 (381)
T ss_dssp HHHH-----------HTT---CC------SCBCCHHHHHHH--CSEEEECCCCCCSSTTCCTTSBCHHHHHHSC----TT
T ss_pred CChH-----------Hhc---cC------cccCCHHHHHhh--CCEEEEcCcCCccccccchhhcCHHHHhcCC----CC
Confidence 7310 000 00 123579999987 798874321 35789999999993 57
Q ss_pred CeEEecCCCCCccCCCHHHHhcccCCcEEEE
Q 007499 436 PAIFAMSNPTMNAECTAADAFKHAGENIVFA 466 (601)
Q Consensus 436 PIIFaLSNPt~~aE~tpeda~~wt~Grai~A 466 (601)
.|+.=.|.-..--|-.-.+|+ .+|+...|
T Consensus 204 ailIN~aRG~vvde~aL~~aL--~~g~i~gA 232 (381)
T 3oet_A 204 AILINACRGPVVDNAALLARL--NAGQPLSV 232 (381)
T ss_dssp EEEEECSCGGGBCHHHHHHHH--HTTCCEEE
T ss_pred cEEEECCCCcccCHHHHHHHH--HhCCCeEE
Confidence 788888774442233333343 35655443
No 53
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=90.00 E-value=0.71 Score=48.21 Aligned_cols=95 Identities=17% Similarity=0.230 Sum_probs=61.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
.||.|+|.|..|..+|..|... | -+++++|++- +....++.... ....++.|+
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~-----G-------~~V~v~dr~~----------~~~~~l~~~g~-----~~~~s~~e~ 75 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKG-----G-------HECVVYDLNV----------NAVQALEREGI-----AGARSIEEF 75 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCH----------HHHHHHHTTTC-----BCCSSHHHH
T ss_pred CEEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCCH----------HHHHHHHHCCC-----EEeCCHHHH
Confidence 7999999999999999888763 4 2678888741 11112222111 123578888
Q ss_pred hccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCC
Q 007499 402 VRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPT 445 (601)
Q Consensus 402 V~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt 445 (601)
++.. +||++|= +...+ -.+++++.+.....+.-||.-+||-.
T Consensus 76 ~~~a~~~DvVi~-~vp~~-~v~~vl~~l~~~l~~g~iiId~st~~ 118 (358)
T 4e21_A 76 CAKLVKPRVVWL-MVPAA-VVDSMLQRMTPLLAANDIVIDGGNSH 118 (358)
T ss_dssp HHHSCSSCEEEE-CSCGG-GHHHHHHHHGGGCCTTCEEEECSSCC
T ss_pred HhcCCCCCEEEE-eCCHH-HHHHHHHHHHhhCCCCCEEEeCCCCC
Confidence 8874 5688763 32334 67888888765445677888888754
No 54
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=89.94 E-value=0.18 Score=54.88 Aligned_cols=45 Identities=18% Similarity=0.217 Sum_probs=31.5
Q ss_pred HHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCC
Q 007499 422 EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSP 470 (601)
Q Consensus 422 ~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai~AsGSP 470 (601)
.++++.|. ++|+.-+++=.|||.. +.-+-+.++++=|+|=..-||
T Consensus 140 ~~i~~~i~-~~~P~A~~in~tNP~~---i~t~a~~~~~~~k~vGlC~~~ 184 (477)
T 3u95_A 140 LEIAEKMK-KMAPKAYLMQTANPVF---EITQAVRRWTGANIIGFCHGV 184 (477)
T ss_dssp HHHHHHHH-HHCTTCEEEECSSCHH---HHHHHHHHHHCCCEEEECCGG
T ss_pred HHHHHHHH-hhCCCeEEEEecChHH---HHHHHHHHhCCCCeEEECCCH
Confidence 58999995 4999999999999986 333345566655555444443
No 55
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=89.74 E-value=3 Score=44.80 Aligned_cols=195 Identities=17% Similarity=0.209 Sum_probs=116.4
Q ss_pred ccCCccccCc---chhHHHHHHHHHHHHHHh---------C---C---CCCCCCCceEEEeCcchHHHHHHHHHHHHHHH
Q 007499 285 KRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------G---L---SLTDFADQKIVVVGAGSAGLGVLKMAVQAAAR 346 (601)
Q Consensus 285 ~~~~~FnDDi---QGTaav~LAgll~Alr~~---------g---~---~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~ 346 (601)
.-+++||--- ..+|=-++|.+|+..|-. | + .-.+|.+.++.|+|.|..|..+|+.+..+
T Consensus 102 ~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l~~~--- 178 (416)
T 3k5p_A 102 RGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAESL--- 178 (416)
T ss_dssp TTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred cCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHHHHHHHHHC---
Confidence 3488888643 345666788888888631 1 0 11345569999999999999999987654
Q ss_pred hcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeec----CCCCCCCH
Q 007499 347 MAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNE 422 (601)
Q Consensus 347 ~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft~ 422 (601)
|+ +++.+|+..- .... -+ ....+|.|+++. .|+++=.- ...+.|++
T Consensus 179 --G~-------~V~~yd~~~~-------~~~~---~~---------~~~~sl~ell~~--aDvV~lhvPlt~~T~~li~~ 228 (416)
T 3k5p_A 179 --GM-------TVRYYDTSDK-------LQYG---NV---------KPAASLDELLKT--SDVVSLHVPSSKSTSKLITE 228 (416)
T ss_dssp --TC-------EEEEECTTCC-------CCBT---TB---------EECSSHHHHHHH--CSEEEECCCC-----CCBCH
T ss_pred --CC-------EEEEECCcch-------hccc---Cc---------EecCCHHHHHhh--CCEEEEeCCCCHHHhhhcCH
Confidence 44 6888997411 1100 01 113579999988 79887432 12388999
Q ss_pred HHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCC-CCceecCCCee--eecccccccccchhhHHH
Q 007499 423 EVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSP-FENVDLGNGKI--GHVNQANNMYLFPGIGLG 499 (601)
Q Consensus 423 evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai~AsGSP-f~pv~~~~G~~--~~p~Q~NN~~iFPGiglG 499 (601)
+.++.|. +..++.=.|.=..--|---.+|++ +|+.- +.|.. |+.-....+.. ..--+..|+.+-|=+|-.
T Consensus 229 ~~l~~mk----~gailIN~aRG~vvd~~aL~~aL~--~g~i~-gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~ 301 (416)
T 3k5p_A 229 AKLRKMK----KGAFLINNARGSDVDLEALAKVLQ--EGHLA-GAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGS 301 (416)
T ss_dssp HHHHHSC----TTEEEEECSCTTSBCHHHHHHHHH--TTSEE-EEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTC
T ss_pred HHHhhCC----CCcEEEECCCChhhhHHHHHHHHH--cCCcc-EEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCC
Confidence 9999993 578898888865533433444543 56643 33322 32211110100 011345689999987633
Q ss_pred HHHcCCcccCHHHHHHHHHHHhccC
Q 007499 500 TLLSGARFITDGMLQQAAECLASYM 524 (601)
Q Consensus 500 ~l~~~a~~itd~m~~aAA~aLA~~v 524 (601)
..-+ -+.|...+++.|.+..
T Consensus 302 T~ea-----~~~~~~~~~~nl~~~l 321 (416)
T 3k5p_A 302 TEEA-----QERIGTEVTRKLVEYS 321 (416)
T ss_dssp CHHH-----HHHHHHHHHHHHHHHH
T ss_pred CHHH-----HHHHHHHHHHHHHHHH
Confidence 2222 2456666677776655
No 56
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=89.72 E-value=0.29 Score=48.71 Aligned_cols=49 Identities=27% Similarity=0.394 Sum_probs=38.3
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 302 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 302 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
-.|++.+++..|..++. .+++|+|||.+|.++|..|.. .| .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~---~~vlvlGaGg~g~a~a~~L~~-----~G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPN---QHVLILGAGGATKGVLLPLLQ-----AQ-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTT---CEEEEECCSHHHHTTHHHHHH-----TT-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCC---CEEEEECCcHHHHHHHHHHHH-----CC-------CEEEEEECC
Confidence 45788888887877777 999999999888888777654 34 379999884
No 57
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=89.67 E-value=0.51 Score=51.17 Aligned_cols=102 Identities=16% Similarity=0.161 Sum_probs=64.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 321 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 321 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
..+|.|+|+|..|..+|..|.+ .|. +++++|+.-- .+. .+...... .+.....++.|
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~-----~G~-------~V~v~~r~~~------~~~----~l~~~~~~-~gi~~~~s~~e 71 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIES-----RGY-------TVSIFNRSRE------KTE----EVIAENPG-KKLVPYYTVKE 71 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSHH------HHH----HHHHHSTT-SCEEECSSHHH
T ss_pred CCeEEEEccHHHHHHHHHHHHh-----CCC-------eEEEEeCCHH------HHH----HHHhhCCC-CCeEEeCCHHH
Confidence 3899999999999999998875 343 5777876410 111 11111000 01112357888
Q ss_pred Hhccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 401 VVRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 401 ~V~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
+++.. ++|++| ++..++...+++++.+.....+..||.-+||-.+
T Consensus 72 ~v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~ 117 (480)
T 2zyd_A 72 FVESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFF 117 (480)
T ss_dssp HHHTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred HHhCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCCH
Confidence 88753 478777 4444556778888887543445668888998764
No 58
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=89.59 E-value=2.7 Score=43.11 Aligned_cols=129 Identities=12% Similarity=0.130 Sum_probs=68.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhh-------cccccc---CC---
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAA-------PFAKDP---GD--- 388 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~-------~fa~~~---~~--- 388 (601)
.||.|+|+|..|.+||..+..+ |. +++++|++-- .+...+. .++... ..
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~~~------~~~~~~~~i~~~l~~l~~~G~~~g~~~~ 68 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIEPR------QITGALENIRKEMKSLQQSGSLKGSLSA 68 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSCHH------HHHHHHHHHHHHHHHHHHTTCCCSSSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCCHH------HHHHHHHHHHHHHHHHHHcCccccccch
Confidence 7899999999999999988753 54 5888887411 0111100 000000 00
Q ss_pred ---CCCcccCCCHHHHhcccCCcEEEeecCCCC-CCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEE
Q 007499 389 ---FMGLREGASLLEVVRKVKPHVLLGLSGVGG-VFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIV 464 (601)
Q Consensus 389 ---~~~~~~~~~L~e~V~~vkptvLIG~S~~~g-~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai 464 (601)
........++.|++++ .|++| .+.... .+.+++++.+.+ +...-.|++ ||=++ ..+.+..+......=
T Consensus 69 ~~~~~~i~~~~~~~eav~~--aDlVi-eavpe~~~~k~~v~~~l~~-~~~~~~Ii~-s~tS~---i~~~~la~~~~~~~r 140 (319)
T 2dpo_A 69 EEQLSLISSCTNLAEAVEG--VVHIQ-ECVPENLDLKRKIFAQLDS-IVDDRVVLS-SSSSC---LLPSKLFTGLAHVKQ 140 (319)
T ss_dssp HHHHHTEEEECCHHHHTTT--EEEEE-ECCCSCHHHHHHHHHHHHT-TCCSSSEEE-ECCSS---CCHHHHHTTCTTGGG
T ss_pred HHHhhceEEeCCHHHHHhc--CCEEE-EeccCCHHHHHHHHHHHHh-hCCCCeEEE-EeCCC---hHHHHHHHhcCCCCC
Confidence 0000123679999987 68877 332222 245677777754 433333443 44332 445555444432222
Q ss_pred EEcCCCCCceec
Q 007499 465 FASGSPFENVDL 476 (601)
Q Consensus 465 ~AsGSPf~pv~~ 476 (601)
|.-+-||.|+.+
T Consensus 141 ~ig~Hp~~P~~~ 152 (319)
T 2dpo_A 141 CIVAHPVNPPYY 152 (319)
T ss_dssp EEEEEECSSTTT
T ss_pred eEEeecCCchhh
Confidence 334457777754
No 59
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=89.59 E-value=1.5 Score=47.19 Aligned_cols=181 Identities=16% Similarity=0.184 Sum_probs=113.6
Q ss_pred ChhhhhHhHHHHHHHHHHhC-CCe-E-EeeCCCCh--HHHHHHHHhc---c--CCcccc----------CcchhHHHHHH
Q 007499 244 EGEEYLSIVDEFMEAVHARW-PKA-I-FEDFQMKW--AFETLERYRK---R--FCMFND----------DIQGTAGVALA 303 (601)
Q Consensus 244 ~g~~Y~~~vdefv~av~~~~-P~~-l-~EDf~~~~--Af~iL~ryr~---~--~~~FnD----------DiQGTaav~LA 303 (601)
+.+|-..|...|++++.+.- |.. + =+|++..- ---+.+.|+. . ..++-- --.-||-=+.-
T Consensus 115 s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~ 194 (415)
T 2tmg_A 115 SRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKV 194 (415)
T ss_dssp CHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHH
Confidence 44566778888999988876 644 5 88998752 1124455532 1 122222 22335555566
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEecCccccCCCCCCChhhh-c
Q 007499 304 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPAAA-P 381 (601)
Q Consensus 304 gll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~-lvD~~GLi~~~r~~l~~~k~-~ 381 (601)
++-.+++..|.+++. .||+|.|.|..|...|++|.+ +.|. +++ +.|++|-+++.. .|+.... .
T Consensus 195 ~~~~~~~~~g~~l~g---~~vaVqG~GnVG~~~a~~L~e----~~Ga-------kvVavsD~~G~i~dp~-Gld~~~l~~ 259 (415)
T 2tmg_A 195 CAGLAMDVLGIDPKK---ATVAVQGFGNVGQFAALLISQ----ELGS-------KVVAVSDSRGGIYNPE-GFDVEELIR 259 (415)
T ss_dssp HHHHHHHHTTCCTTT---CEEEEECCSHHHHHHHHHHHH----TTCC-------EEEEEECSSCEEECTT-CCCHHHHHH
T ss_pred HHHHHHHHcCCCcCC---CEEEEECCcHHHHHHHHHHHH----hcCC-------EEEEEEeCCCeEECCC-CCCHHHHHH
Confidence 677788888998777 999999999999999988865 1342 455 899999988754 3433211 1
Q ss_pred cccccCCCCCc--ccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007499 382 FAKDPGDFMGL--REGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 446 (601)
Q Consensus 382 fa~~~~~~~~~--~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN-Pt~ 446 (601)
+......+.+. ....+-.| +-.++.|+||=+.. ++..|++-.+.+ .-.+|.--+| |+.
T Consensus 260 ~~~~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l-----~ak~V~EgAN~p~t 320 (415)
T 2tmg_A 260 YKKEHGTVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI-----KAKAVVEGANGPTT 320 (415)
T ss_dssp HHHHSSCSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC-----CCSEEECCSSSCBC
T ss_pred HHHhhCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc-----CCeEEEeCCCcccC
Confidence 11111111100 01123344 45678999997775 688899888876 3568887887 653
No 60
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=89.52 E-value=2.3 Score=42.19 Aligned_cols=82 Identities=22% Similarity=0.261 Sum_probs=55.5
Q ss_pred EeeCCCChHHHHHHHHhcc-C----CccccCcchhHHHHHHHHHHHHHHh-CCCCCCCCCceEEEeC-cchHHHHHHHHH
Q 007499 268 FEDFQMKWAFETLERYRKR-F----CMFNDDIQGTAGVALAGLLGTVRAQ-GLSLTDFADQKIVVVG-AGSAGLGVLKMA 340 (601)
Q Consensus 268 ~EDf~~~~Af~iL~ryr~~-~----~~FnDDiQGTaav~LAgll~Alr~~-g~~l~dl~~~riv~~G-AGsAg~GiA~ll 340 (601)
++-+.-..+.+++++-+.. + ++...|..|.- ..-.|++.+++.. +.+++. .+++|.| +|.+|.++|..+
T Consensus 64 ~~G~~~~~~~~~~~~~~~~~~gavnt~~~~~~~G~n-Td~~g~~~~l~~~~~~~l~g---k~vlVtGaaGGiG~aia~~L 139 (287)
T 1lu9_A 64 VGGGDMAAGERVFEAVKKRFFGPFRVSCMLDSNGSN-TTAAAGVALVVKAAGGSVKG---KKAVVLAGTGPVGMRSAALL 139 (287)
T ss_dssp EECSCHHHHHHHHHHHHHHCBTTBCCEEEECSTTHH-HHHHHHHHHHHHHTTSCCTT---CEEEEETCSSHHHHHHHHHH
T ss_pred EccchHHHHHHHHHHHHHhcCCCeEEEEecCCCcCC-chHHHHHHHHHHhhccCCCC---CEEEEECCCcHHHHHHHHHH
Confidence 4555566888888887753 1 22234555532 2356677778766 777777 9999999 888888887777
Q ss_pred HHHHHHhcCCChhhhcCeEEEEecC
Q 007499 341 VQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 341 ~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+ .|. +++++|++
T Consensus 140 ~~-----~G~-------~V~i~~R~ 152 (287)
T 1lu9_A 140 AG-----EGA-------EVVLCGRK 152 (287)
T ss_dssp HH-----TTC-------EEEEEESS
T ss_pred HH-----CcC-------EEEEEECC
Confidence 64 342 48888885
No 61
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=89.34 E-value=0.51 Score=45.93 Aligned_cols=106 Identities=16% Similarity=0.244 Sum_probs=60.5
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccc--cCCC-CCCCh-hhhccccccCCCCCccc
Q 007499 319 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI--TKER-KNLDP-AAAPFAKDPGDFMGLRE 394 (601)
Q Consensus 319 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi--~~~r-~~l~~-~k~~fa~~~~~~~~~~~ 394 (601)
+...||.|+|+|..|.++|..|... | -+++++|++--- .+.. ..+.. ....++..... ..
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~-----G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 80 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADL-----G-------HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPH----VH 80 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCHHHHHTCC-------CCHHHHGGGSTT----CE
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCc----ee
Confidence 3449999999999999999988763 4 268888875211 0000 00000 01122221100 12
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHh-hhcCCCCCeEEecCCCC
Q 007499 395 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAM-RESDSVKPAIFAMSNPT 445 (601)
Q Consensus 395 ~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M-a~~~~erPIIFaLSNPt 445 (601)
..++.|+++. +|++| ++..+. ...++++.+ +... +..||.-+|||.
T Consensus 81 ~~~~~e~~~~--aDvVi-lavp~~-~~~~~~~~i~~~~l-~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 LAAFADVAAG--AELVV-NATEGA-SSIAALTAAGAENL-AGKILVDIANPL 127 (245)
T ss_dssp EEEHHHHHHH--CSEEE-ECSCGG-GHHHHHHHHCHHHH-TTSEEEECCCCE
T ss_pred ccCHHHHHhc--CCEEE-EccCcH-HHHHHHHHhhhhhc-CCCEEEECCCCC
Confidence 3579999987 78877 343233 334666655 3222 567999999985
No 62
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=89.00 E-value=0.45 Score=47.23 Aligned_cols=49 Identities=22% Similarity=0.335 Sum_probs=37.5
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 302 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 302 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
-.|++.+++..|..++. .+++|+|||.+|.++|..+.. .| .+++++|++
T Consensus 103 ~~G~~~~L~~~~~~l~~---k~vlViGaGg~g~a~a~~L~~-----~G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPG---LRILLIGAGGASRGVLLPLLS-----LD-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTT---CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCC---CEEEEECCcHHHHHHHHHHHH-----cC-------CEEEEEECC
Confidence 55777888887877777 999999999777777766654 34 368888874
No 63
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=88.84 E-value=0.16 Score=55.62 Aligned_cols=131 Identities=18% Similarity=0.187 Sum_probs=76.1
Q ss_pred ceEEEeCcchHH--HHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccc-cccCCCCCcccCCCH
Q 007499 322 QKIVVVGAGSAG--LGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA-KDPGDFMGLREGASL 398 (601)
Q Consensus 322 ~riv~~GAGsAg--~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa-~~~~~~~~~~~~~~L 398 (601)
.||.|+|||+.| .++|..|+.. .++ +-..++|+|.+-=..+. +......+. +-..+. ......++
T Consensus 4 ~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~e~l~~---~~~~~~~~l~~~~~~~-~I~~ttD~ 71 (480)
T 1obb_A 4 VKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDEERLDA---ILTIAKKYVEEVGADL-KFEKTMNL 71 (480)
T ss_dssp CEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCHHHHHH---HHHHHHHHHHHTTCCC-EEEEESCH
T ss_pred CEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCHHHHHH---HHHHHHHHhccCCCCc-EEEEECCH
Confidence 699999999965 4446666531 111 12579999985311110 111111111 000010 01123679
Q ss_pred HHHhcccCCcEEEeecCC---------------CCCCC-------------------------HHHHHHhhhcCCCCCeE
Q 007499 399 LEVVRKVKPHVLLGLSGV---------------GGVFN-------------------------EEVLKAMRESDSVKPAI 438 (601)
Q Consensus 399 ~e~V~~vkptvLIG~S~~---------------~g~Ft-------------------------~evv~~Ma~~~~erPII 438 (601)
.+++++ .|++|=+.+. .|.|. +++++.|.+ +|..-+|
T Consensus 72 ~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~-~~P~A~i 148 (480)
T 1obb_A 72 DDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEK-LSPKAWY 148 (480)
T ss_dssp HHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHH-HCTTCEE
T ss_pred HHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHH-HCCCeEE
Confidence 899988 7888744422 23433 688888964 9999999
Q ss_pred EecCCCCCccCCCHHHHhcccCCcEEEEcCCC
Q 007499 439 FAMSNPTMNAECTAADAFKHAGENIVFASGSP 470 (601)
Q Consensus 439 FaLSNPt~~aE~tpeda~~wt~Grai~AsGSP 470 (601)
+-.|||.. +..+-+.++..-|+|=.+.+|
T Consensus 149 i~~TNPvd---i~t~~~~k~p~~rviG~c~~~ 177 (480)
T 1obb_A 149 LQAANPIF---EGTTLVTRTVPIKAVGFCHGH 177 (480)
T ss_dssp EECSSCHH---HHHHHHHHHSCSEEEEECSGG
T ss_pred EEeCCcHH---HHHHHHHHCCCCcEEecCCCH
Confidence 99999996 555566666666655444344
No 64
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=88.81 E-value=0.41 Score=51.87 Aligned_cols=106 Identities=17% Similarity=0.206 Sum_probs=63.9
Q ss_pred ceEEEeCcchH--HHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc-cccCCCCCCChhhhccccccCCCCCcccCCCH
Q 007499 322 QKIVVVGAGSA--GLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG-LITKERKNLDPAAAPFAKDPGDFMGLREGASL 398 (601)
Q Consensus 322 ~riv~~GAGsA--g~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G-Li~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L 398 (601)
.||.|+||||. |.|++..|+.. ..+ . ..|+|+|.+- -+.. +......+.+ .++. .....++
T Consensus 6 ~KIaVIGaGs~g~g~~la~~l~~~----~~~----~-geV~L~Di~~e~le~----~~~~~~~l~~--~~~~-I~~TtD~ 69 (450)
T 3fef_A 6 IKIAYIGGGSQGWARSLMSDLSID----ERM----S-GTVALYDLDFEAAQK----NEVIGNHSGN--GRWR-YEAVSTL 69 (450)
T ss_dssp EEEEEETTTCSSHHHHHHHHHHHC----SSC----C-EEEEEECSSHHHHHH----HHHHHTTSTT--SCEE-EEEESSH
T ss_pred CEEEEECCChhHhHHHHHHHHHhc----ccc----C-CeEEEEeCCHHHHHH----HHHHHHHHhc--cCCe-EEEECCH
Confidence 89999999995 68998888752 222 1 3799999852 1100 0000001111 1100 1124679
Q ss_pred HHHhcccCCcEEEeecCCC---------------CC---------------------CCHHHHHHhhhcCCCCCeEEecC
Q 007499 399 LEVVRKVKPHVLLGLSGVG---------------GV---------------------FNEEVLKAMRESDSVKPAIFAMS 442 (601)
Q Consensus 399 ~e~V~~vkptvLIG~S~~~---------------g~---------------------Ft~evv~~Ma~~~~erPIIFaLS 442 (601)
.||+++ +|.+|=.-.++ |. .-.++++.|. +++..-+|+-.|
T Consensus 70 ~eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~-~~~p~a~~i~~t 146 (450)
T 3fef_A 70 KKALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIR-DYAPESWVINYT 146 (450)
T ss_dssp HHHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHH-HHCTTSEEEECC
T ss_pred HHHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHH-HHCCCeEEEEec
Confidence 999998 78887322111 22 1356777775 489999999999
Q ss_pred CCCC
Q 007499 443 NPTM 446 (601)
Q Consensus 443 NPt~ 446 (601)
||..
T Consensus 147 NPvd 150 (450)
T 3fef_A 147 NPMS 150 (450)
T ss_dssp SSHH
T ss_pred CchH
Confidence 9995
No 65
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=88.80 E-value=0.75 Score=48.45 Aligned_cols=158 Identities=15% Similarity=0.162 Sum_probs=96.2
Q ss_pred hHhHHHHHHHHHHhCCCeE-EeeCCCChHHHHHHHHhccC-CccccC---------cchhHHHHHHHHHHHHHHh-CC-C
Q 007499 249 LSIVDEFMEAVHARWPKAI-FEDFQMKWAFETLERYRKRF-CMFNDD---------IQGTAGVALAGLLGTVRAQ-GL-S 315 (601)
Q Consensus 249 ~~~vdefv~av~~~~P~~l-~EDf~~~~Af~iL~ryr~~~-~~FnDD---------iQGTaav~LAgll~Alr~~-g~-~ 315 (601)
++++..|.+++..+....+ =+|++..- +.+...-+++ ++---- ..-||-=+.-++..+++.. |. +
T Consensus 93 ~~~~r~~~~~~~~l~g~~i~A~D~Gt~~--~~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~~~ 170 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGRYITAEDVGTTV--DDMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGSDS 170 (364)
T ss_dssp HHHHHHHHHHHHTTTTSEEBCBCTTCCH--HHHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHHhcCceEEcccCCCCH--HHHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhccccC
Confidence 4577778888888875566 88987644 3455555555 211111 1234444444556666654 65 6
Q ss_pred CCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccC
Q 007499 316 LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREG 395 (601)
Q Consensus 316 l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~ 395 (601)
|+. .+|+|.|+|..|..+|+.+.+. |. ++++.|++ .+.+.++...| ... .
T Consensus 171 L~G---ktV~V~G~G~VG~~~A~~L~~~-----Ga-------kVvv~D~~------~~~l~~~a~~~---ga~------~ 220 (364)
T 1leh_A 171 LEG---LAVSVQGLGNVAKALCKKLNTE-----GA-------KLVVTDVN------KAAVSAAVAEE---GAD------A 220 (364)
T ss_dssp CTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC------HHHHHHHHHHH---CCE------E
T ss_pred CCc---CEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEcCC------HHHHHHHHHHc---CCE------E
Confidence 777 9999999999999999988754 42 57788853 11122222222 111 1
Q ss_pred CCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CC
Q 007499 396 ASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PT 445 (601)
Q Consensus 396 ~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN-Pt 445 (601)
.++.++. ..+.|++|=++ ..+.++++.++.| .-.+|.--+| |+
T Consensus 221 v~~~~ll-~~~~DIvip~a-~~~~I~~~~~~~l-----g~~iV~e~An~p~ 264 (364)
T 1leh_A 221 VAPNAIY-GVTCDIFAPCA-LGAVLNDFTIPQL-----KAKVIAGSADNQL 264 (364)
T ss_dssp CCGGGTT-TCCCSEEEECS-CSCCBSTTHHHHC-----CCSEECCSCSCCB
T ss_pred EChHHHh-ccCCcEeeccc-hHHHhCHHHHHhC-----CCcEEEeCCCCCc
Confidence 1222322 25689999654 5789999988887 2467776777 54
No 66
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=88.33 E-value=1.2 Score=45.61 Aligned_cols=104 Identities=19% Similarity=0.225 Sum_probs=63.3
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCC-CCCChhhhccccccCCCCCcccCCCHHH
Q 007499 323 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 323 riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
||+|+|| |..|..++..|+. .|+ ...++++|.+-. ... .+|.+.. .+. .........++.+
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~~--~~~a~dL~~~~----~~~-~l~~~~~t~d~~~ 64 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAHT--PGVAADLSHIE----TRA-TVKGYLGPEQLPD 64 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSSH--HHHHHHHTTSS----SSC-EEEEEESGGGHHH
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCcc--HHHHHHHhccC----cCc-eEEEecCCCCHHH
Confidence 7999998 9999998876652 454 246999998641 000 0121110 000 0000000136899
Q ss_pred HhcccCCcEEEeecCCC---C-----------CCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 401 VVRKVKPHVLLGLSGVG---G-----------VFNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~---g-----------~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
++++ .|++|=+.+.| | ...+++++.|.+ ++...+|+-.|||..
T Consensus 65 a~~~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~viv~sNPv~ 121 (314)
T 1mld_A 65 CLKG--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQ-HCPDAMICIISNPVN 121 (314)
T ss_dssp HHTT--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHH-HCTTSEEEECSSCHH
T ss_pred HhCC--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHh-hCCCeEEEEECCCcc
Confidence 9998 79887444433 3 235667777754 778888888999986
No 67
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=88.30 E-value=0.27 Score=50.37 Aligned_cols=36 Identities=25% Similarity=0.444 Sum_probs=31.1
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 319 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 319 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
|.+.||+|+|+|..|.-+|..|+.+.+ .+|.++|.+
T Consensus 34 L~~~~VlVvGaGGlGs~va~~La~aGV-----------G~i~lvD~D 69 (292)
T 3h8v_A 34 IRTFAVAIVGVGGVGSVTAEMLTRCGI-----------GKLLLFDYD 69 (292)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHHTC-----------SEEEEECCC
T ss_pred HhCCeEEEECcCHHHHHHHHHHHHcCC-----------CEEEEECCC
Confidence 334999999999999999999988754 689999987
No 68
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=88.22 E-value=0.42 Score=47.64 Aligned_cols=121 Identities=20% Similarity=0.245 Sum_probs=68.4
Q ss_pred HHHHHHHHHHhCCCe----------E-EeeCCCChHHHHH--HHHhccCCccccCcchhHHHHHHHHHHHHHHhCCCCCC
Q 007499 252 VDEFMEAVHARWPKA----------I-FEDFQMKWAFETL--ERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTD 318 (601)
Q Consensus 252 vdefv~av~~~~P~~----------l-~EDf~~~~Af~iL--~ryr~~~~~FnDDiQGTaav~LAgll~Alr~~g~~l~d 318 (601)
+++|++.++.-|-.+ + +=|- ++.|..+= +....+ .=+|-|-. |++.+++.. +
T Consensus 42 l~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~-~~~A~~iGAvNTi~~~-~G~NTD~~--------G~~~~l~~~-----~ 106 (253)
T 3u62_A 42 FDTEIRRILEEYDGFNATIPHKERVMRYVEP-SEDAQRIKAVNCVFRG-KGYNTDWV--------GVVKSLEGV-----E 106 (253)
T ss_dssp HHHHHHHHHHHCSEEEECTTCTTGGGGGSEE-CHHHHHHTCCCEEETT-EEECCHHH--------HHHHHTTTC-----C
T ss_pred HHHHHHHHhhCCCceeecCChHHHHHHHhCC-CHHHHHcCcceEeecC-EEEcchHH--------HHHHHHHhc-----C
Confidence 567777766334322 1 4454 66665540 000001 34555544 577777543 3
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCH
Q 007499 319 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 398 (601)
Q Consensus 319 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L 398 (601)
+.+ +++|+|||.+|.+++..|.. .|. ++|+++|+. .++ -+.+++.-.. ....++
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~-----~G~------~~I~v~nR~----~~k------a~~la~~~~~----~~~~~~ 160 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQ-----MGV------KDIWVVNRT----IER------AKALDFPVKI----FSLDQL 160 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESC----HHH------HHTCCSSCEE----EEGGGH
T ss_pred CCC-eEEEECcHHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHH------HHHHHHHccc----CCHHHH
Confidence 566 99999999998888777664 353 579999984 111 1122221000 012457
Q ss_pred HHHhcccCCcEEEeecC
Q 007499 399 LEVVRKVKPHVLLGLSG 415 (601)
Q Consensus 399 ~e~V~~vkptvLIG~S~ 415 (601)
.++++. +|++|-++.
T Consensus 161 ~~~~~~--aDiVInatp 175 (253)
T 3u62_A 161 DEVVKK--AKSLFNTTS 175 (253)
T ss_dssp HHHHHT--CSEEEECSS
T ss_pred HhhhcC--CCEEEECCC
Confidence 888877 899997653
No 69
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=88.09 E-value=0.59 Score=46.52 Aligned_cols=82 Identities=26% Similarity=0.372 Sum_probs=53.3
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhcc
Q 007499 303 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPF 382 (601)
Q Consensus 303 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~f 382 (601)
.|++.+++..|..++. .+++|+|+|.+|..+|..|... |. +|+++|++- +.-+.+
T Consensus 114 ~G~~~~l~~~~~~~~~---~~v~iiGaG~~g~aia~~L~~~-----g~-------~V~v~~r~~----------~~~~~l 168 (275)
T 2hk9_A 114 IGFLKSLKSLIPEVKE---KSILVLGAGGASRAVIYALVKE-----GA-------KVFLWNRTK----------EKAIKL 168 (275)
T ss_dssp HHHHHHHHHHCTTGGG---SEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSH----------HHHHHH
T ss_pred HHHHHHHHHhCCCcCC---CEEEEECchHHHHHHHHHHHHc-----CC-------EEEEEECCH----------HHHHHH
Confidence 3788888888877777 9999999999999998887653 32 688888741 011122
Q ss_pred ccccCCCCCcccCCCHHHHhcccCCcEEEeecC
Q 007499 383 AKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG 415 (601)
Q Consensus 383 a~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~ 415 (601)
++... . .-..++.++++. +|++|-+..
T Consensus 169 ~~~~g-~---~~~~~~~~~~~~--aDiVi~atp 195 (275)
T 2hk9_A 169 AQKFP-L---EVVNSPEEVIDK--VQVIVNTTS 195 (275)
T ss_dssp TTTSC-E---EECSCGGGTGGG--CSEEEECSS
T ss_pred HHHcC-C---eeehhHHhhhcC--CCEEEEeCC
Confidence 21100 0 011256777765 899997654
No 70
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=88.08 E-value=1.4 Score=44.66 Aligned_cols=114 Identities=11% Similarity=0.126 Sum_probs=64.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhh-----ccccccCCCC-CcccC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAA-----PFAKDPGDFM-GLREG 395 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~-----~fa~~~~~~~-~~~~~ 395 (601)
.||.|+|+|..|..+|..|...... .. ....+++++|++.-... +......++ .|- +...+. +....
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~-~~----~~~~~V~~~~r~~~~~~-~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~ 81 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQ-LA----QFDPRVTMWVFEEDIGG-KKLTEIINTQHENVKYL-PGHKLPPNVVAV 81 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH-CT----TEEEEEEEECCCCBSSS-SBHHHHHHHHSCCTTTS-TTCCCCTTEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCc-cc----CCCCeEEEEEcChhhhh-hHHHHHHHhcCcccccC-CcccCccCeEEE
Confidence 6999999999999999999876420 00 00036888887532110 000111000 000 000000 00112
Q ss_pred CCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 396 ASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 396 ~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
.++.|+++. +|++| ++. +....+++++.++....+..+|..++|-..
T Consensus 82 ~~~~~~~~~--aD~Vi-lav-~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 82 PDVVQAAED--ADILI-FVV-PHQFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp SSHHHHHTT--CSEEE-ECC-CGGGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred cCHHHHHcC--CCEEE-EeC-CHHHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 568888876 78776 333 335778999988643345678889999553
No 71
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=87.88 E-value=1.3 Score=48.40 Aligned_cols=179 Identities=14% Similarity=0.138 Sum_probs=115.0
Q ss_pred ChhhhhHhHHHHHHHHHHhC-CCe-E-EeeCCCChH--HHHHHHHhcc--C--Ccc----------ccCcchhHHHHHHH
Q 007499 244 EGEEYLSIVDEFMEAVHARW-PKA-I-FEDFQMKWA--FETLERYRKR--F--CMF----------NDDIQGTAGVALAG 304 (601)
Q Consensus 244 ~g~~Y~~~vdefv~av~~~~-P~~-l-~EDf~~~~A--f~iL~ryr~~--~--~~F----------nDDiQGTaav~LAg 304 (601)
+..|...|-..||+.+.+.. |.. + =+|++..-. --+.+.|+.. . .|+ .++-.-||-=+.-+
T Consensus 159 S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~ 238 (470)
T 2bma_A 159 SDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYF 238 (470)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHH
Confidence 45667778888888888654 653 4 889987422 1245666531 1 111 11223466656667
Q ss_pred HHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEecCccccCCCCCCChhh----
Q 007499 305 LLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPAA---- 379 (601)
Q Consensus 305 ll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~-lvD~~GLi~~~r~~l~~~k---- 379 (601)
+-.+++..|.+|+. .||+|-|.|..|...|+.|.+. |. +++ +.|++|-|++.. .|+...
T Consensus 239 ~~~~l~~~G~~l~g---~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~G~i~dp~-Gid~edl~~l 302 (470)
T 2bma_A 239 VLEVLKSLNIPVEK---QTAVVSGSGNVALYCVQKLLHL-----NV-------KVLTLSDSNGYVYEPN-GFTHENLEFL 302 (470)
T ss_dssp HHHHHHTTTCCGGG---CEEEEECSSHHHHHHHHHHHHT-----TC-------EECEEEETTEEEECSS-CCCHHHHHHH
T ss_pred HHHHHHhccCCcCC---CEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEEeCCceEECCC-CCCHHHHHHH
Confidence 77888888887777 9999999999999999988763 42 455 899999988753 343331
Q ss_pred -----------hccccccCCCCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007499 380 -----------APFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 446 (601)
Q Consensus 380 -----------~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN-Pt~ 446 (601)
..|+...+ + ....+-.+. -.++.||||=+.. ++..|++-++.+.+ +.-.||.--+| |+.
T Consensus 303 ~~~k~~~~g~v~~~~~~~~---~-a~~v~~~~~-~~~~~DI~iPcA~-~~~I~~~na~~l~~--~~ak~V~EgAN~p~T 373 (470)
T 2bma_A 303 IDLKEEKKGRIKEYLNHSS---T-AKYFPNEKP-WGVPCTLAFPCAT-QNDVDLDQAKLLQK--NGCILVGEGANMPST 373 (470)
T ss_dssp HHHHTTTTCCGGGGGGTCS---S-CEECSSCCT-TSSCCSEEEECSS-TTCBCSHHHHHHHH--TTCCEEECCSSSCBC
T ss_pred HHHHHhcCCcHHHHHhhcC---C-cEEecCcCe-eecCccEEEeccc-cCcCCHHHHHHHHh--cCcEEEEeCCCCCCC
Confidence 11221000 0 000000122 2578999998885 79999999999853 56779999998 653
No 72
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=87.69 E-value=6.7 Score=41.67 Aligned_cols=193 Identities=19% Similarity=0.219 Sum_probs=108.1
Q ss_pred ccCCccccCc---chhHHHHHHHHHHHHHHh---------CC------CCCCCCCceEEEeCcchHHHHHHHHHHHHHHH
Q 007499 285 KRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAAR 346 (601)
Q Consensus 285 ~~~~~FnDDi---QGTaav~LAgll~Alr~~---------g~------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~ 346 (601)
.-+++||--- +.+|=-++|.+|+..|-. |. .-.+|.+.++.|+|-|..|..+|+.+...
T Consensus 91 ~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~~--- 167 (404)
T 1sc6_A 91 RGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESL--- 167 (404)
T ss_dssp TTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHHHHHHHC---
Confidence 3488888644 345556799999888731 10 11345559999999999999999988653
Q ss_pred hcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeec----CCCCCCCH
Q 007499 347 MAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNE 422 (601)
Q Consensus 347 ~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft~ 422 (601)
|+ +++.+|+..- ..+ .-+ ....+|.|+++. .|+++=.- ...+.|++
T Consensus 168 --G~-------~V~~~d~~~~-----~~~-----~~~---------~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~ 217 (404)
T 1sc6_A 168 --GM-------YVYFYDIENK-----LPL-----GNA---------TQVQHLSDLLNM--SDVVSLHVPENPSTKNMMGA 217 (404)
T ss_dssp --TC-------EEEEECSSCC-----CCC-----TTC---------EECSCHHHHHHH--CSEEEECCCSSTTTTTCBCH
T ss_pred --CC-------EEEEEcCCch-----hcc-----CCc---------eecCCHHHHHhc--CCEEEEccCCChHHHHHhhH
Confidence 43 6888887421 000 000 112479999987 78877431 12478999
Q ss_pred HHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEE-----cCCCCCceecCCCeeeecccccccccchhhH
Q 007499 423 EVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA-----SGSPFENVDLGNGKIGHVNQANNMYLFPGIG 497 (601)
Q Consensus 423 evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai~A-----sGSPf~pv~~~~G~~~~p~Q~NN~~iFPGig 497 (601)
+.+..|. +.-++.=.|.=..--|-.-.+|++ +|+.--| ..-|.++=+. -...--+..|+.+-|=+|
T Consensus 218 ~~l~~mk----~ga~lIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDVf~~EP~~~~~~---~~~pL~~~~nvilTPHi~ 288 (404)
T 1sc6_A 218 KEISLMK----PGSLLINASRGTVVDIPALADALA--SKHLAGAAIDVFPTEPATNSDP---FTSPLAEFDNVLLTPHIG 288 (404)
T ss_dssp HHHHHSC----TTEEEEECSCSSSBCHHHHHHHHH--TTSEEEEEEEC---------CT---TTGGGTTCTTEEEECCCS
T ss_pred HHHhhcC----CCeEEEECCCChHHhHHHHHHHHH--cCCccEEEEeecCCCCCCcccc---ccchhhcCCCEEECCCCC
Confidence 9999993 567888888643322222234433 5554311 1112110000 000111345888888775
Q ss_pred HHHHHcCCcccCHHHHHHHHHHHhccC
Q 007499 498 LGTLLSGARFITDGMLQQAAECLASYM 524 (601)
Q Consensus 498 lG~l~~~a~~itd~m~~aAA~aLA~~v 524 (601)
-...-+ -+.|...+++.|.+..
T Consensus 289 ~~T~ea-----~~~~~~~~~~nl~~~l 310 (404)
T 1sc6_A 289 GSTQEA-----QENIGLEVAGKLIKYS 310 (404)
T ss_dssp CCSHHH-----HHHHHHHHHHHHHHHH
T ss_pred CCcHHH-----HHHHHHHHHHHHHHHH
Confidence 322211 2335555666665554
No 73
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=87.50 E-value=0.33 Score=43.07 Aligned_cols=91 Identities=12% Similarity=0.135 Sum_probs=51.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
.+|+|+|+|..|..++..+.. .|. + ++++|++ . +..+.|++.... . .....++.++
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~-----~g~------~-v~v~~r~----~------~~~~~~a~~~~~-~-~~~~~~~~~~ 77 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSY-----PQY------K-VTVAGRN----I------DHVRAFAEKYEY-E-YVLINDIDSL 77 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCT-----TTC------E-EEEEESC----H------HHHHHHHHHHTC-E-EEECSCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------E-EEEEcCC----H------HHHHHHHHHhCC-c-eEeecCHHHH
Confidence 899999999998877765543 232 3 8888874 1 111123321100 0 0123568888
Q ss_pred hcccCCcEEEeecCCCC-CCCHHHHHHhhhcCCCCCeEEecCCCC
Q 007499 402 VRKVKPHVLLGLSGVGG-VFNEEVLKAMRESDSVKPAIFAMSNPT 445 (601)
Q Consensus 402 V~~vkptvLIG~S~~~g-~Ft~evv~~Ma~~~~erPIIFaLSNPt 445 (601)
++. .|++|-+++.+. .++.+. ..+.-+|+-+++|.
T Consensus 78 ~~~--~Divi~at~~~~~~~~~~~-------l~~g~~vid~~~p~ 113 (144)
T 3oj0_A 78 IKN--NDVIITATSSKTPIVEERS-------LMPGKLFIDLGNPP 113 (144)
T ss_dssp HHT--CSEEEECSCCSSCSBCGGG-------CCTTCEEEECCSSC
T ss_pred hcC--CCEEEEeCCCCCcEeeHHH-------cCCCCEEEEccCCc
Confidence 876 799887665432 333321 22455677777764
No 74
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=87.27 E-value=3.1 Score=40.06 Aligned_cols=92 Identities=13% Similarity=0.102 Sum_probs=59.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
.||.|+|+|..|..+|..|... |.. ...+++++|++ ..+ + . - ....++.|+
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~----~~~---------~--g-~-----~~~~~~~~~ 55 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPS----KKN---------T--T-L-----NYMSSNEEL 55 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSS----CCS---------S--S-S-----EECSCHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCC----ccc---------C--c-e-----EEeCCHHHH
Confidence 6899999999999999988754 310 00268888874 111 0 0 0 112467888
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 007499 402 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMN 447 (601)
Q Consensus 402 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~ 447 (601)
++. +|++| ++.. ....+++++.+.. +.+..+|+.++|..+.
T Consensus 56 ~~~--~D~vi-~~v~-~~~~~~v~~~l~~-~l~~~~vv~~~~gi~~ 96 (262)
T 2rcy_A 56 ARH--CDIIV-CAVK-PDIAGSVLNNIKP-YLSSKLLISICGGLNI 96 (262)
T ss_dssp HHH--CSEEE-ECSC-TTTHHHHHHHSGG-GCTTCEEEECCSSCCH
T ss_pred Hhc--CCEEE-EEeC-HHHHHHHHHHHHH-hcCCCEEEEECCCCCH
Confidence 876 78776 3332 3456888888854 3356678888888764
No 75
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=87.08 E-value=1.1 Score=44.84 Aligned_cols=100 Identities=18% Similarity=0.108 Sum_probs=58.5
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec--CccccCCCCCCChhhhccccc--cCCCCCcccCC--
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK--DGLITKERKNLDPAAAPFAKD--PGDFMGLREGA-- 396 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~--~GLi~~~r~~l~~~k~~fa~~--~~~~~~~~~~~-- 396 (601)
||.|+|+|..|..+|..|... | .+++++|+ +.-- +...++...+. ..++....-..
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~ 63 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGTEFDTEI------LKSISAGREHPRLGVKLNGVEIFWPE 63 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECCGGGHHH------HHHHHTTCCBTTTTBCCCSEEEECGG
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEccCCHHH------HHHHHHhCcCcccCccccceEEecHH
Confidence 799999999999999888653 4 36888887 4210 00000000000 00000000112
Q ss_pred CHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCC
Q 007499 397 SLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPT 445 (601)
Q Consensus 397 ~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt 445 (601)
++.|+++. +|++|= +. +.-..+++++.++. ..+..+|..++|-.
T Consensus 64 ~~~~~~~~--~D~vi~-~v-~~~~~~~v~~~i~~-l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 64 QLEKCLEN--AEVVLL-GV-STDGVLPVMSRILP-YLKDQYIVLISKGL 107 (335)
T ss_dssp GHHHHHTT--CSEEEE-CS-CGGGHHHHHHHHTT-TCCSCEEEECCCSE
T ss_pred hHHHHHhc--CCEEEE-cC-ChHHHHHHHHHHhc-CCCCCEEEEEcCcC
Confidence 67788876 787763 32 22367888888865 55567888898876
No 76
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=86.92 E-value=0.35 Score=43.08 Aligned_cols=32 Identities=34% Similarity=0.605 Sum_probs=25.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
..|+|+|||.||+..|..|.. .|+ ++.++|+.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~-----~G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKS 34 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 359999999999999988865 465 47888864
No 77
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=86.86 E-value=0.28 Score=49.79 Aligned_cols=106 Identities=13% Similarity=0.200 Sum_probs=61.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCC-CCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.||.|+|||+.|.++|..+... |+. +++++|.+-=..+. ..++.+. ..+....... ....++ +
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~~------~V~l~D~~~~~~~~~~~~l~~~-~~~~~~~~~i---~~t~d~-~ 68 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NLA------DVVLFDIAEGIPQGKALDITHS-MVMFGSTSKV---IGTDDY-A 68 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC------EEEEECSSSSHHHHHHHHHHHH-HHHHTCCCCE---EEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCc------eEEEEeCCchHHHHHHHHHHhh-hhhcCCCcEE---EECCCH-H
Confidence 6899999999999999988753 431 59999985200000 0001110 0111001000 112456 6
Q ss_pred HhcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 401 VVRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
+++. +|++|=+.+.|.. +.+++++.+.+ +++.-||+-.|||..
T Consensus 69 a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~-~~~~~iii~~sNp~~ 125 (317)
T 2ewd_A 69 DISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKK-YCPNAFVICITNPLD 125 (317)
T ss_dssp GGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHH-HCTTSEEEECCSSHH
T ss_pred HhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHH-HCCCcEEEEeCChHH
Confidence 7776 7887754433321 23567777754 678889999999976
No 78
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=86.74 E-value=0.95 Score=46.98 Aligned_cols=101 Identities=21% Similarity=0.335 Sum_probs=59.1
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCC
Q 007499 318 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 397 (601)
Q Consensus 318 dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~ 397 (601)
++...+++|+|+|..|..+|+.+.. .|. +++++|++- . .+...+..+.... ... .....+
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~-----~Ga-------~V~~~d~~~----~--~~~~~~~~~g~~~-~~~-~~~~~~ 222 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALG-----MGA-------QVTILDVNH----K--RLQYLDDVFGGRV-ITL-TATEAN 222 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----H--HHHHHHHHTTTSE-EEE-ECCHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEECCH----H--HHHHHHHhcCceE-EEe-cCCHHH
Confidence 3555999999999999998887764 342 688888741 0 1111111111100 000 001235
Q ss_pred HHHHhcccCCcEEEeecCCCC-----CCCHHHHHHhhhcCCCCCeEEecCCC
Q 007499 398 LLEVVRKVKPHVLLGLSGVGG-----VFNEEVLKAMRESDSVKPAIFAMSNP 444 (601)
Q Consensus 398 L~e~V~~vkptvLIG~S~~~g-----~Ft~evv~~Ma~~~~erPIIFaLSNP 444 (601)
+.++++. .|++|.+.+.++ .++++.++.|. +.-+|.-+|.+
T Consensus 223 l~~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk----~gg~iV~v~~~ 268 (369)
T 2eez_A 223 IKKSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMK----EGAVIVDVAVD 268 (369)
T ss_dssp HHHHHHH--CSEEEECCC-------CCSCHHHHTTSC----TTCEEEECC--
T ss_pred HHHHHhC--CCEEEECCCCCccccchhHHHHHHHhhc----CCCEEEEEecC
Confidence 7888876 899998876543 47899999993 34566666643
No 79
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=86.66 E-value=1.7 Score=42.00 Aligned_cols=123 Identities=15% Similarity=0.195 Sum_probs=68.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCC-ChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGN-NDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gl-s~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.||.|+|+|..|..+|..|... |. . .++++++|++- +.+. .+++... .....++.|
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~~----~~~V~~~~r~~------~~~~----~~~~~~g----~~~~~~~~e 59 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIVS----SNQIICSDLNT------ANLK----NASEKYG----LTTTTDNNE 59 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSSC----GGGEEEECSCH------HHHH----HHHHHHC----CEECSCHHH
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCCC----CCeEEEEeCCH------HHHH----HHHHHhC----CEEeCChHH
Confidence 5899999999999999888753 42 2 13688888731 1111 2211100 012357889
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCceec
Q 007499 401 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDL 476 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai~AsGSPf~pv~~ 476 (601)
+++. +|++| ++. +..-.+++++.+.....+..+|...++-.+. +..-++....+-+...-|+.|+..
T Consensus 60 ~~~~--aDvVi-lav-~~~~~~~v~~~l~~~l~~~~~vvs~~~gi~~-----~~l~~~~~~~~~~v~~~p~~p~~~ 126 (247)
T 3gt0_A 60 VAKN--ADILI-LSI-KPDLYASIINEIKEIIKNDAIIVTIAAGKSI-----ESTENAFNKKVKVVRVMPNTPALV 126 (247)
T ss_dssp HHHH--CSEEE-ECS-CTTTHHHHC---CCSSCTTCEEEECSCCSCH-----HHHHHHHCSCCEEEEEECCGGGGG
T ss_pred HHHh--CCEEE-EEe-CHHHHHHHHHHHHhhcCCCCEEEEecCCCCH-----HHHHHHhCCCCcEEEEeCChHHHH
Confidence 9987 78877 333 3445677887775323456688877776653 222233221122233357777765
No 80
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=86.54 E-value=3.2 Score=42.37 Aligned_cols=123 Identities=17% Similarity=0.173 Sum_probs=78.4
Q ss_pred CCccccCc---chhHHHHHHHHHHHHHHh---------C----CCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCC
Q 007499 287 FCMFNDDI---QGTAGVALAGLLGTVRAQ---------G----LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGN 350 (601)
Q Consensus 287 ~~~FnDDi---QGTaav~LAgll~Alr~~---------g----~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gl 350 (601)
+.+.|--- +.+|=-+++.+|+..|.. | ..-.+|.+.+|.|+|.|..|..+|+.+... |+
T Consensus 92 i~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~-----G~ 166 (313)
T 2ekl_A 92 IKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTKVGIIANAM-----GM 166 (313)
T ss_dssp CEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHHHT-----TC
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHHHC-----CC
Confidence 55555432 334445788888887742 1 111244559999999999999999988753 43
Q ss_pred ChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecC----CCCCCCHHHHH
Q 007499 351 NDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVFNEEVLK 426 (601)
Q Consensus 351 s~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~----~~g~Ft~evv~ 426 (601)
+++.+|+.. ... . +.... ....+|.|+++. .|+++=+-- ..+.++++.++
T Consensus 167 -------~V~~~d~~~---------~~~--~-~~~~g-----~~~~~l~ell~~--aDvVvl~~P~~~~t~~li~~~~l~ 220 (313)
T 2ekl_A 167 -------KVLAYDILD---------IRE--K-AEKIN-----AKAVSLEELLKN--SDVISLHVTVSKDAKPIIDYPQFE 220 (313)
T ss_dssp -------EEEEECSSC---------CHH--H-HHHTT-----CEECCHHHHHHH--CSEEEECCCCCTTSCCSBCHHHHH
T ss_pred -------EEEEECCCc---------chh--H-HHhcC-----ceecCHHHHHhh--CCEEEEeccCChHHHHhhCHHHHh
Confidence 688888741 111 1 11100 012379999987 798875421 34778899999
Q ss_pred HhhhcCCCCCeEEecCCC
Q 007499 427 AMRESDSVKPAIFAMSNP 444 (601)
Q Consensus 427 ~Ma~~~~erPIIFaLSNP 444 (601)
.|. +..++.-.|.-
T Consensus 221 ~mk----~ga~lIn~arg 234 (313)
T 2ekl_A 221 LMK----DNVIIVNTSRA 234 (313)
T ss_dssp HSC----TTEEEEESSCG
T ss_pred cCC----CCCEEEECCCC
Confidence 993 46788878773
No 81
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=86.46 E-value=0.29 Score=50.30 Aligned_cols=129 Identities=16% Similarity=0.204 Sum_probs=71.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCC-CCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.||.|+|||+.|.++|.++.. .|+- .++|+|.+-=..+. ..++.+...+...+ ... ....++ +
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~-----~g~~------~v~L~Di~~~~l~~~~~~l~~~~~~~~~~-~~i---~~t~d~-~ 68 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQ-----KNLG------DVVLFDIVKNMPHGKALDTSHTNVMAYSN-CKV---SGSNTY-D 68 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSSSHHHHHHHHHHTHHHHHTCC-CCE---EEECCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEeCCHHHHHHHHHHHHhhhhhcCCC-cEE---EECCCH-H
Confidence 589999999999999888875 3541 39999975100000 00111111111111 000 112456 7
Q ss_pred HhcccCCcEEEeecCCC---CC----------------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhccc--
Q 007499 401 VVRKVKPHVLLGLSGVG---GV----------------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA-- 459 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~---g~----------------Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt-- 459 (601)
++++ .|++|=+.+.| |. .-+++.+.|.+ +++.-+|+-.|||.... .+-+.+.+
T Consensus 69 al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~tNP~~~~---t~~~~~~~g~ 142 (322)
T 1t2d_A 69 DLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKK-NCPNAFIIVVTNPVDVM---VQLLHQHSGV 142 (322)
T ss_dssp GGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHH-HCTTSEEEECSSSHHHH---HHHHHHHHCC
T ss_pred HhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHH-HCCCeEEEEecCChHHH---HHHHHHhcCC
Confidence 7887 79887554333 31 34667777754 77888877779998742 33344433
Q ss_pred CCcEEEEcCCCCC
Q 007499 460 GENIVFASGSPFE 472 (601)
Q Consensus 460 ~Grai~AsGSPf~ 472 (601)
.-.-+|.+|+..+
T Consensus 143 ~~~rviG~gt~ld 155 (322)
T 1t2d_A 143 PKNKIIGLGGVLD 155 (322)
T ss_dssp CGGGEEECCHHHH
T ss_pred ChHHEEeccCccc
Confidence 1223556654443
No 82
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=86.32 E-value=0.32 Score=51.05 Aligned_cols=35 Identities=23% Similarity=0.422 Sum_probs=30.6
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 320 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 320 ~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+.||+|+|||..|..+|..|+.+.+ ++|.++|.+
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGV-----------g~ItlvD~D 67 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGV-----------RKITFVDNG 67 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTC-----------CEEEEECCC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCC-----------CEEEEecCC
Confidence 34999999999999999999987644 689999997
No 83
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=86.32 E-value=4.6 Score=42.13 Aligned_cols=194 Identities=15% Similarity=0.198 Sum_probs=108.5
Q ss_pred cCCccccCc---chhHHHHHHHHHHHHHHh---------CC---------CCCCCCCceEEEeCcchHHHHHHHHHHHHH
Q 007499 286 RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL---------SLTDFADQKIVVVGAGSAGLGVLKMAVQAA 344 (601)
Q Consensus 286 ~~~~FnDDi---QGTaav~LAgll~Alr~~---------g~---------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~ 344 (601)
.+++.|--- +.+|=-+++-+|+..|.. |. .-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 117 gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~- 195 (345)
T 4g2n_A 117 GIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGF- 195 (345)
T ss_dssp TCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTT-
T ss_pred CEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHC-
Confidence 355555432 345556788888887742 10 01355569999999999999999988653
Q ss_pred HHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecC----CCCCC
Q 007499 345 ARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVF 420 (601)
Q Consensus 345 ~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~----~~g~F 420 (601)
|+ +++.+|+... +... +.. . ....+|.|+++. .|+++=.-- ..+.|
T Consensus 196 ----G~-------~V~~~dr~~~--------~~~~---~~g-~-----~~~~~l~ell~~--sDvV~l~~Plt~~T~~li 245 (345)
T 4g2n_A 196 ----GL-------AIHYHNRTRL--------SHAL---EEG-A-----IYHDTLDSLLGA--SDIFLIAAPGRPELKGFL 245 (345)
T ss_dssp ----TC-------EEEEECSSCC--------CHHH---HTT-C-----EECSSHHHHHHT--CSEEEECSCCCGGGTTCB
T ss_pred ----CC-------EEEEECCCCc--------chhh---hcC-C-----eEeCCHHHHHhh--CCEEEEecCCCHHHHHHh
Confidence 43 6888887531 1111 111 0 012479999987 798874321 23889
Q ss_pred CHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCC-CCceecCCCeeeecccccccccchhhHHH
Q 007499 421 NEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSP-FENVDLGNGKIGHVNQANNMYLFPGIGLG 499 (601)
Q Consensus 421 t~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai~AsGSP-f~pv~~~~G~~~~p~Q~NN~~iFPGiglG 499 (601)
+++.++.|. +..|+.=.|+-..--|-.-.+|++ +|+.-.| |-. |++-. + ....--+..|+.+-|=+|-.
T Consensus 246 ~~~~l~~mk----~gailIN~aRG~~vde~aL~~aL~--~g~i~gA-~LDVf~~EP-~--~~~pL~~~~nvilTPHia~~ 315 (345)
T 4g2n_A 246 DHDRIAKIP----EGAVVINISRGDLINDDALIEALR--SKHLFAA-GLDVFANEP-A--IDPRYRSLDNIFLTPHIGSA 315 (345)
T ss_dssp CHHHHHHSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEE-EESCCTTTT-S--CCTTGGGCTTEEECCSCTTC
T ss_pred CHHHHhhCC----CCcEEEECCCCchhCHHHHHHHHH--hCCceEE-EecCCCCCC-C--CCchHHhCCCEEEcCccCcC
Confidence 999999993 577888888644322333334443 5664333 211 11000 0 00011234577777766421
Q ss_pred HHHcCCcccCHHHHHHHHHHHhccCC
Q 007499 500 TLLSGARFITDGMLQQAAECLASYMT 525 (601)
Q Consensus 500 ~l~~~a~~itd~m~~aAA~aLA~~v~ 525 (601)
. ..--..|...+++.|.....
T Consensus 316 t-----~e~~~~~~~~~~~ni~~~l~ 336 (345)
T 4g2n_A 316 T-----HETRDAMGWLLIQGIEALNQ 336 (345)
T ss_dssp B-----HHHHHHHHHHHHHHHHHHHT
T ss_pred C-----HHHHHHHHHHHHHHHHHHHc
Confidence 1 11124455556666655543
No 84
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=86.01 E-value=3.3 Score=42.82 Aligned_cols=122 Identities=18% Similarity=0.253 Sum_probs=76.1
Q ss_pred CCccccCc---chhHHHHHHHHHHHHHHh---------C----CC---CCCCCCceEEEeCcchHHHHHHHHHHHHHHHh
Q 007499 287 FCMFNDDI---QGTAGVALAGLLGTVRAQ---------G----LS---LTDFADQKIVVVGAGSAGLGVLKMAVQAAARM 347 (601)
Q Consensus 287 ~~~FnDDi---QGTaav~LAgll~Alr~~---------g----~~---l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~ 347 (601)
+.+.|--- +.+|=-+++-+|+..|.. | .. -.+|.+.+|.|+|.|..|..+|+.+..
T Consensus 111 I~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~----- 185 (333)
T 3ba1_A 111 VRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAERAEA----- 185 (333)
T ss_dssp CEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHHHHHHHT-----
T ss_pred cEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHHHHHHHH-----
Confidence 55555332 234445677777776531 1 00 124555999999999999999998764
Q ss_pred cCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeec----CCCCCCCHH
Q 007499 348 AGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNEE 423 (601)
Q Consensus 348 ~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft~e 423 (601)
.|+ +++.+|+..- . .. .+ ....+|.|+++. .|+++=+- ...+.++++
T Consensus 186 ~G~-------~V~~~dr~~~----~--~~----g~----------~~~~~l~ell~~--aDvVil~vP~~~~t~~li~~~ 236 (333)
T 3ba1_A 186 FDC-------PISYFSRSKK----P--NT----NY----------TYYGSVVELASN--SDILVVACPLTPETTHIINRE 236 (333)
T ss_dssp TTC-------CEEEECSSCC----T--TC----CS----------EEESCHHHHHHT--CSEEEECSCCCGGGTTCBCHH
T ss_pred CCC-------EEEEECCCch----h--cc----Cc----------eecCCHHHHHhc--CCEEEEecCCChHHHHHhhHH
Confidence 343 5888887521 0 10 00 012469999887 78877432 124788899
Q ss_pred HHHHhhhcCCCCCeEEecCCCCC
Q 007499 424 VLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 424 vv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
.++.|. +..+|.-.|.-..
T Consensus 237 ~l~~mk----~gailIn~srG~~ 255 (333)
T 3ba1_A 237 VIDALG----PKGVLINIGRGPH 255 (333)
T ss_dssp HHHHHC----TTCEEEECSCGGG
T ss_pred HHhcCC----CCCEEEECCCCch
Confidence 999993 4668777776443
No 85
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=85.99 E-value=2.4 Score=42.94 Aligned_cols=101 Identities=15% Similarity=0.105 Sum_probs=60.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
.||.|+|+|..|..+|..|..+ |... ..+++++|+.- ++ +....+.+..- .-..+..|+
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~-----G~~~---~~~V~v~~r~~----~~----~~~~~l~~~G~-----~~~~~~~e~ 81 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAA-----GVLA---AHKIMASSPDM----DL----ATVSALRKMGV-----KLTPHNKET 81 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHT-----TSSC---GGGEEEECSCT----TS----HHHHHHHHHTC-----EEESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CCCC---cceEEEECCCc----cH----HHHHHHHHcCC-----EEeCChHHH
Confidence 6899999999999999888653 4210 13588888741 00 01111111110 112467788
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 007499 402 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMN 447 (601)
Q Consensus 402 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~ 447 (601)
++. .|++| ++.. ....+++++.++....+..+|.-+||..+.
T Consensus 82 ~~~--aDvVi-lav~-~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~ 123 (322)
T 2izz_A 82 VQH--SDVLF-LAVK-PHIIPFILDEIGADIEDRHIVVSCAAGVTI 123 (322)
T ss_dssp HHH--CSEEE-ECSC-GGGHHHHHHHHGGGCCTTCEEEECCTTCCH
T ss_pred hcc--CCEEE-EEeC-HHHHHHHHHHHHhhcCCCCEEEEeCCCCCH
Confidence 876 68766 3332 345677888775434456688889988763
No 86
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=85.96 E-value=1.6 Score=47.68 Aligned_cols=101 Identities=12% Similarity=0.189 Sum_probs=60.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhcccc-ccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK-DPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~-~~~~~~~~~~~~~L~e 400 (601)
.+|.|+|+|..|.++|..|.+. |. +++++|+.-- .+ ..+.. .... .+.....++.|
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~~~------~~----~~l~~~~~~~-~gi~~~~s~~e 67 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRTQS------KV----DHFLANEAKG-KSIIGATSIED 67 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSSH------HH----HHHHHTTTTT-SSEECCSSHHH
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCCHH------HH----HHHHcccccC-CCeEEeCCHHH
Confidence 5899999999999999988753 53 5788887411 01 11111 0000 00112356888
Q ss_pred Hhccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 401 VVRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 401 ~V~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
+++.. +||++| ++..++...+++++.+.....+..||.-+||-.+
T Consensus 68 ~v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~ 113 (497)
T 2p4q_A 68 FISKLKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHF 113 (497)
T ss_dssp HHHTSCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred HHhcCCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCCh
Confidence 87653 377766 4433445667777777543344567777887543
No 87
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=85.82 E-value=0.3 Score=50.33 Aligned_cols=129 Identities=15% Similarity=0.190 Sum_probs=71.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCC-CCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.||.|+|||+.|.++|.++.. .|+- .++++|.+-=..+. ..++.+...++... ... ....++ +
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~-----~g~~------~V~L~Di~~~~l~~~~~~l~~~~~~~~~~-~~i---~~t~d~-~ 78 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ-----KDLG------DVYMFDIIEGVPQGKALDLNHCMALIGSP-AKI---FGENNY-E 78 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSTTHHHHHHHHHHHHHHHHTCC-CCE---EEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEECCHHHHHHHHHHHHhHhhccCCC-CEE---EECCCH-H
Confidence 589999999999999977764 3541 39999985210000 00121111111111 111 112456 7
Q ss_pred HhcccCCcEEEeecCC---CCC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhccc--CCcEE
Q 007499 401 VVRKVKPHVLLGLSGV---GGV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA--GENIV 464 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~---~g~-----------Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt--~Grai 464 (601)
++++ .|++|=+.+. +|. .-+++.+.+.+ +++.-+|+-.|||... ..+-+.+.+ .-.-+
T Consensus 79 al~~--aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~-~~p~a~viv~tNP~~~---~t~~~~~~~~~~~~rv 152 (328)
T 2hjr_A 79 YLQN--SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGK-YCPNAFVICITNPLDA---MVYYFKEKSGIPANKV 152 (328)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHHH---HHHHHHHHHCCCGGGE
T ss_pred HHCC--CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHH-HCCCeEEEEecCchHH---HHHHHHHhcCCChhhE
Confidence 7877 7888744322 332 13566777754 6777777667999873 233443333 12235
Q ss_pred EEcCCCCC
Q 007499 465 FASGSPFE 472 (601)
Q Consensus 465 ~AsGSPf~ 472 (601)
|.+|++.+
T Consensus 153 iG~~t~Ld 160 (328)
T 2hjr_A 153 CGMSGVLD 160 (328)
T ss_dssp EESCHHHH
T ss_pred EEeCcHHH
Confidence 57766665
No 88
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=85.58 E-value=2 Score=44.69 Aligned_cols=119 Identities=14% Similarity=0.180 Sum_probs=67.5
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhcc
Q 007499 303 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPF 382 (601)
Q Consensus 303 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~f 382 (601)
++.+++.... +... .++.|+|+|..|..++..+... .+. ++|+++|++ .+ ........|
T Consensus 116 ~s~laa~~la--~~~~---~~v~iIGaG~~a~~~a~al~~~----~~~------~~V~V~~r~----~~--~a~~la~~~ 174 (350)
T 1x7d_A 116 TSLMAAQALA--RPNA---RKMALIGNGAQSEFQALAFHKH----LGI------EEIVAYDTD----PL--ATAKLIANL 174 (350)
T ss_dssp HHHHHHHHHS--CTTC---CEEEEECCSTTHHHHHHHHHHH----SCC------CEEEEECSS----HH--HHHHHHHHH
T ss_pred HHHHHHHHhc--cccC---CeEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HH--HHHHHHHHH
Confidence 3455555443 2345 8999999999998887766542 232 578988873 11 111112222
Q ss_pred ccccCCCCCcccCCCHHHHhcccCCcEEEeecCCC---CCCCHHHHHHhhhcCCCCCeEEecCC--CCCccCCCHHH
Q 007499 383 AKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVG---GVFNEEVLKAMRESDSVKPAIFAMSN--PTMNAECTAAD 454 (601)
Q Consensus 383 a~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~---g~Ft~evv~~Ma~~~~erPIIFaLSN--Pt~~aE~tped 454 (601)
... .... .....++.|+++. .|++|-++..+ -.|+.+++ .+.-.|+.++. |. +.|+.++-
T Consensus 175 ~~~-~g~~-~~~~~~~~eav~~--aDiVi~aTps~~~~pvl~~~~l-------~~G~~V~~vgs~~p~-~~El~~~~ 239 (350)
T 1x7d_A 175 KEY-SGLT-IRRASSVAEAVKG--VDIITTVTADKAYATIITPDML-------EPGMHLNAVGGDCPG-KTELHADV 239 (350)
T ss_dssp TTC-TTCE-EEECSSHHHHHTT--CSEEEECCCCSSEEEEECGGGC-------CTTCEEEECSCCBTT-BEEECHHH
T ss_pred Hhc-cCce-EEEeCCHHHHHhc--CCEEEEeccCCCCCceecHHHc-------CCCCEEEECCCCCCC-ceeeCHHH
Confidence 110 0000 0124679999987 89998766433 13443222 24458888876 66 56887643
No 89
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=85.44 E-value=1.4 Score=44.97 Aligned_cols=120 Identities=20% Similarity=0.248 Sum_probs=71.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCC-CCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.||.|+|||+.|.|+|..++.. |+ -..++|+|.+-= ..+. .++.+ +..+ .. ....++ +
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~-----~~ev~L~Di~~~-~~g~a~dl~~----~~~~--~i---~~t~d~-~ 73 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GI-----ADRLVLLDLSEG-TKGATMDLEI----FNLP--NV---EISKDL-S 73 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECCC------CHHHHHH----HTCT--TE---EEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CC-----CCEEEEEcCCcc-hHHHHHHHhh----hcCC--Ce---EEeCCH-H
Confidence 6899999999999999988642 43 157999998631 1111 01221 1111 11 112456 6
Q ss_pred HhcccCCcEEEeecCCC--CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc---cCCcEE
Q 007499 401 VVRKVKPHVLLGLSGVG--GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH---AGENIV 464 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~--g~-----------Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~w---t~Grai 464 (601)
++++ .|++|=+.+.+ |- .-+++++.|.+ +++.-+|+-.|||.. ...+-+++. ...| +
T Consensus 74 ~l~~--aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~sNP~~---~~t~~~~~~~~~p~~r-v 146 (303)
T 2i6t_A 74 ASAH--SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGH-YSQHSVLLVASQPVE---IMTYVTWKLSTFPANR-V 146 (303)
T ss_dssp GGTT--CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHH-HTTTCEEEECSSSHH---HHHHHHHHHHCCCGGG-E
T ss_pred HHCC--CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEEcCChHH---HHHHHHHHhcCCCHHH-e
Confidence 7777 79888544332 20 13567777854 788999888999986 445555553 2233 4
Q ss_pred EEcCC
Q 007499 465 FASGS 469 (601)
Q Consensus 465 ~AsGS 469 (601)
|.+|.
T Consensus 147 iG~gt 151 (303)
T 2i6t_A 147 IGIGC 151 (303)
T ss_dssp EECTT
T ss_pred eCCCC
Confidence 56653
No 90
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=85.42 E-value=5.9 Score=42.99 Aligned_cols=184 Identities=14% Similarity=0.159 Sum_probs=111.9
Q ss_pred ChhhhhHhHHHHHHHHHHhC-CCe-E-EeeCCCChHH--HHHHHHhc---cC--Ccccc----------CcchhHHHHHH
Q 007499 244 EGEEYLSIVDEFMEAVHARW-PKA-I-FEDFQMKWAF--ETLERYRK---RF--CMFND----------DIQGTAGVALA 303 (601)
Q Consensus 244 ~g~~Y~~~vdefv~av~~~~-P~~-l-~EDf~~~~Af--~iL~ryr~---~~--~~FnD----------DiQGTaav~LA 303 (601)
+..|-..|-..||..+.+.. |.. + =+|++..-.. -+.+.|+. .. -++-. .-.-||-=+.-
T Consensus 136 s~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~ 215 (449)
T 1bgv_A 136 SDREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVY 215 (449)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHH
Confidence 34566777777888886555 654 4 8898876211 13344443 11 22211 11335555556
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCC-Chhh---
Q 007499 304 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNL-DPAA--- 379 (601)
Q Consensus 304 gll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l-~~~k--- 379 (601)
++-.+++..|.+++. .||+|-|.|..|...|++|.+. |. +=+-+.|++|-|++.. .| ++.+
T Consensus 216 ~~~~~~~~~G~~l~g---~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~-Gi~d~edi~~ 280 (449)
T 1bgv_A 216 YVEAVMKHENDTLVG---KTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE-GITTEEKINY 280 (449)
T ss_dssp HHHHHHHHTTCCSTT---CEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT-CSCSHHHHHH
T ss_pred HHHHHHHHccCCcCC---CEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC-cCCCHHHHHH
Confidence 677788888987777 9999999999999999888764 32 2344799999988753 35 3221
Q ss_pred -hcccccc-CCCCCc-----ccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007499 380 -APFAKDP-GDFMGL-----REGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 446 (601)
Q Consensus 380 -~~fa~~~-~~~~~~-----~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN-Pt~ 446 (601)
..+.... ..|... ....+-.+. -.++.|+|+=+. .++..|++-.+.+.+ |...||.-=+| |+.
T Consensus 281 l~~~k~~~~g~v~~y~~~~~a~~i~~~e~-~~~~~Dil~P~A-~~~~I~~~na~~l~a--~g~kiV~EgAN~p~T 351 (449)
T 1bgv_A 281 MLEMRASGRNKVQDYADKFGVQFFPGEKP-WGQKVDIIMPCA-TQNDVDLEQAKKIVA--NNVKYYIEVANMPTT 351 (449)
T ss_dssp HHHHHHHCCCCTHHHHHHHTCEEEETCCG-GGSCCSEEECCS-CTTCBCHHHHHHHHH--TTCCEEECCSSSCBC
T ss_pred HHHHHhccCCChhhcccccCCEEeCchhh-hcCCcceeeccc-cccccchhhHHHHHh--cCCeEEEeCCCCcCC
Confidence 0111000 000000 000000112 256899999877 479999999999953 44579998888 654
No 91
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=85.41 E-value=0.31 Score=49.51 Aligned_cols=123 Identities=20% Similarity=0.246 Sum_probs=65.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCC-CCCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
||.|+|||+.|.++|..+.. .|+- ..++++|.+---... ..++.+.. +|..+. .. ...+ .++
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~~-----~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~~-~i----~~~~-~~a 64 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGSC-----SELVLVDRDEDRAQAEAEDIAHAA-PVSHGT-RV----WHGG-HSE 64 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSSHHHHHHHHHHHTTSC-CTTSCC-EE----EEEC-GGG
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCCHHHHHHHHHhhhhhh-hhcCCe-EE----EECC-HHH
Confidence 79999999999999977654 3531 379999985210000 00111110 111110 00 0123 356
Q ss_pred hcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEc
Q 007499 402 VRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFAS 467 (601)
Q Consensus 402 V~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai~As 467 (601)
+++ .|++|=+.+.|.. .-+++++.|.+ +++.-+|+-.|||.. .....+.+.+.-.-+|.+
T Consensus 65 ~~~--aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~~~vi~~tNP~~---~~~~~~~~~~~~~rviG~ 138 (304)
T 2v6b_A 65 LAD--AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITR-AAPDAVLLVTSNPVD---LLTDLATQLAPGQPVIGS 138 (304)
T ss_dssp GTT--CSEEEECC------------CHHHHHHHHHHHHHHHHH-HCSSSEEEECSSSHH---HHHHHHHHHSCSSCEEEC
T ss_pred hCC--CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHH-hCCCeEEEEecCchH---HHHHHHHHhCChhcEEeC
Confidence 766 7888754433321 12677888865 677778877999986 333334444333334555
Q ss_pred C
Q 007499 468 G 468 (601)
Q Consensus 468 G 468 (601)
|
T Consensus 139 g 139 (304)
T 2v6b_A 139 G 139 (304)
T ss_dssp T
T ss_pred C
Confidence 4
No 92
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=85.30 E-value=0.27 Score=53.17 Aligned_cols=131 Identities=12% Similarity=0.144 Sum_probs=75.7
Q ss_pred ceEEEeCcchH-HHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCC-CCCChhhhcccc-ccCCCCCcccCCCH
Q 007499 322 QKIVVVGAGSA-GLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAK-DPGDFMGLREGASL 398 (601)
Q Consensus 322 ~riv~~GAGsA-g~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fa~-~~~~~~~~~~~~~L 398 (601)
.||.|+|||+. |.+++..|+.. ..++. -..|+|+|.+--. ++ +.+.+....+.. -..+.. .....++
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~----~~ev~L~Di~~~~--e~~~~~~~~~~~~~~~~~~~~~-i~~t~D~ 77 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELP----VGELWLVDIPEGK--EKLEIVGALAKRMVEKAGVPIE-IHLTLDR 77 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCC----EEEEEEECCGGGH--HHHHHHHHHHHHHHHHTTCCCE-EEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCC----CCEEEEEEcCCCh--HHHHHHHHHHHHHHhhcCCCcE-EEEeCCH
Confidence 69999999997 55554444431 14442 1579999985300 11 001111112211 000100 1123679
Q ss_pred HHHhcccCCcEEEeecCCCCC----------------------------------CCHHHHHHhhhcCCCCCeEEecCCC
Q 007499 399 LEVVRKVKPHVLLGLSGVGGV----------------------------------FNEEVLKAMRESDSVKPAIFAMSNP 444 (601)
Q Consensus 399 ~e~V~~vkptvLIG~S~~~g~----------------------------------Ft~evv~~Ma~~~~erPIIFaLSNP 444 (601)
.+++++ .|++|=+.+.++. .=.++++.|. ++|..-+|+-.|||
T Consensus 78 ~eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~-~~~P~a~ii~~tNP 154 (450)
T 1s6y_A 78 RRALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDME-ELCPDAWLINFTNP 154 (450)
T ss_dssp HHHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHH-HHCTTCEEEECSSS
T ss_pred HHHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHH-HHCCCeEEEEeCCc
Confidence 999998 7988855544321 1257888885 49999999999999
Q ss_pred CCccCCCHHHHhcccCCcEEEEcC
Q 007499 445 TMNAECTAADAFKHAGENIVFASG 468 (601)
Q Consensus 445 t~~aE~tpeda~~wt~Grai~AsG 468 (601)
.. +..+-+++.+.-.-+|.+|
T Consensus 155 vd---ivT~a~~k~~p~~rViG~c 175 (450)
T 1s6y_A 155 AG---MVTEAVLRYTKQEKVVGLC 175 (450)
T ss_dssp HH---HHHHHHHHHCCCCCEEECC
T ss_pred HH---HHHHHHHHhCCCCCEEEeC
Confidence 96 5556666776442455554
No 93
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=84.99 E-value=1 Score=44.63 Aligned_cols=32 Identities=22% Similarity=0.350 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||.|+|+|..|.++|..+... |. +++++|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 5899999999999999988753 42 68888874
No 94
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=84.93 E-value=1 Score=47.02 Aligned_cols=99 Identities=19% Similarity=0.290 Sum_probs=60.5
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCC
Q 007499 318 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 397 (601)
Q Consensus 318 dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~ 397 (601)
++...+++|+|+|..|..+|+.+... |. +++.+|++.- .+...+..+.... ... .....+
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~-----Ga-------~V~~~d~~~~------~l~~~~~~~g~~~-~~~-~~~~~~ 224 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGM-----GA-------TVTVLDINID------KLRQLDAEFCGRI-HTR-YSSAYE 224 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCHH------HHHHHHHHTTTSS-EEE-ECCHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCCHH------HHHHHHHhcCCee-Eec-cCCHHH
Confidence 45569999999999999998877643 42 6888887410 1111111121100 000 001235
Q ss_pred HHHHhcccCCcEEEeecCCC-----CCCCHHHHHHhhhcCCCCCeEEecC
Q 007499 398 LLEVVRKVKPHVLLGLSGVG-----GVFNEEVLKAMRESDSVKPAIFAMS 442 (601)
Q Consensus 398 L~e~V~~vkptvLIG~S~~~-----g~Ft~evv~~Ma~~~~erPIIFaLS 442 (601)
+.+.++. .|++|.+...+ ..++++.++.|. +.-+|.=+|
T Consensus 225 l~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk----~g~~iV~va 268 (377)
T 2vhw_A 225 LEGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMK----PGAVLVDIA 268 (377)
T ss_dssp HHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSC----TTCEEEEGG
T ss_pred HHHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCC----CCcEEEEEe
Confidence 7788876 89999876544 457899999983 345666666
No 95
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=84.90 E-value=0.91 Score=45.86 Aligned_cols=104 Identities=19% Similarity=0.218 Sum_probs=58.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhcccc-ccCC--CCCcccCCCH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK-DPGD--FMGLREGASL 398 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~-~~~~--~~~~~~~~~L 398 (601)
.||.|+|+|+-|..+|..|..+ | .+++++|+.-. + .+...-..+-. ...+ +....-..++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~--~---~i~~~Gl~~~~~~~g~~~~~~~~~~~~~ 65 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRSDY--E---TVKAKGIRIRSATLGDYTFRPAAVVRSA 65 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECSTTH--H---HHHHHCEEEEETTTCCEEECCSCEESCG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCChH--H---HHHhCCcEEeecCCCcEEEeeeeeECCH
Confidence 5899999999999999888653 4 36888887531 0 01000000000 0000 0000012345
Q ss_pred HHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 399 LEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 399 ~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
.++.+ .+|++| ++.. --.++++++.++....+..+|+.+.|-..
T Consensus 66 ~~~~~--~~DlVi-lavK-~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 66 AELET--KPDCTL-LCIK-VVEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp GGCSS--CCSEEE-ECCC-CCTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred HHcCC--CCCEEE-EecC-CCChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 55443 378777 5543 33456889988654455678888999765
No 96
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=84.53 E-value=0.73 Score=46.49 Aligned_cols=106 Identities=16% Similarity=0.206 Sum_probs=59.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCC-CCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.||.|+|||+.|..+|..|... |+. ..++++|++---.+. ..++.+. ..+... ... ....++ +
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~~-----~~V~l~d~~~~~~~~~~~~l~~~-~~~~~~--~~~--~~~~d~-~ 65 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GVA-----DDYVFIDANEAKVKADQIDFQDA-MANLEA--HGN--IVINDW-A 65 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSSHHHHHHHHHHHHHH-GGGSSS--CCE--EEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC-----CEEEEEcCCHHHHHHHHHHHHhh-hhhcCC--CeE--EEeCCH-H
Confidence 4899999999999998888653 441 479999985200000 0001100 011110 000 002356 6
Q ss_pred HhcccCCcEEEeecCC-------CCCC-----------CHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 401 VVRKVKPHVLLGLSGV-------GGVF-----------NEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~-------~g~F-----------t~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
+++. .|++|=+... +|-. -+++++.|.+ ++...+|+-+|||..
T Consensus 66 ~~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~-~~~~~~ii~~tNp~~ 126 (309)
T 1hyh_A 66 ALAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKE-SGFHGVLVVISNPVD 126 (309)
T ss_dssp GGTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHH-TTCCSEEEECSSSHH
T ss_pred HhCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCcEEEEEcCcHH
Confidence 7766 7887744332 2211 1578888854 677778888999986
No 97
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=84.52 E-value=0.25 Score=53.75 Aligned_cols=130 Identities=20% Similarity=0.209 Sum_probs=74.9
Q ss_pred ceEEEeCcchH-HHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccc-cccCCCCCcccCCCHH
Q 007499 322 QKIVVVGAGSA-GLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA-KDPGDFMGLREGASLL 399 (601)
Q Consensus 322 ~riv~~GAGsA-g~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa-~~~~~~~~~~~~~~L~ 399 (601)
.||.|+|||+. +.++|..|+.. ..++. -..++|+|.+-=..+ .+.+....+. .-..+.. .....++.
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~---~~~l~----~~eV~L~Di~~e~~~---~~~~~~~~~l~~~~~~~~-I~~t~D~~ 97 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDH---LEEFP----IRKLKLYDNDKERQD---RIAGACDVFIREKAPDIE-FAATTDPE 97 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHT---TTTSC----EEEEEEECSCHHHHH---HHHHHHHHHHHHHCTTSE-EEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHhC---CCCCC----CCEEEEEeCCHHHHH---HHHHHHHHHhccCCCCCE-EEEECCHH
Confidence 69999999996 44556555431 12442 147999998531111 1111111221 1000100 11235799
Q ss_pred HHhcccCCcEEEeecCCCC---------------C-------------------CCHHHHHHhhhcCCCCCeEEecCCCC
Q 007499 400 EVVRKVKPHVLLGLSGVGG---------------V-------------------FNEEVLKAMRESDSVKPAIFAMSNPT 445 (601)
Q Consensus 400 e~V~~vkptvLIG~S~~~g---------------~-------------------Ft~evv~~Ma~~~~erPIIFaLSNPt 445 (601)
+++++ .|++|=+.+.++ . .=+++++.|.+ +|+.-+|+-.|||.
T Consensus 98 eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~-~~P~A~ii~~TNPv 174 (472)
T 1u8x_X 98 EAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEK-YSPDAWMLNYSNPA 174 (472)
T ss_dssp HHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSCH
T ss_pred HHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHH-HCCCeEEEEeCCcH
Confidence 99998 798885544321 1 13588888854 99999999999999
Q ss_pred CccCCCHHHHhcccCCcEEEEcC
Q 007499 446 MNAECTAADAFKHAGENIVFASG 468 (601)
Q Consensus 446 ~~aE~tpeda~~wt~Grai~AsG 468 (601)
. +..+-+++.+.-.-+|.+|
T Consensus 175 d---i~T~~~~k~~p~~rViG~c 194 (472)
T 1u8x_X 175 A---IVAEATRRLRPNSKILNIC 194 (472)
T ss_dssp H---HHHHHHHHHSTTCCEEECC
T ss_pred H---HHHHHHHHhCCCCCEEEeC
Confidence 6 4555566655432345543
No 98
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=84.26 E-value=4.5 Score=42.11 Aligned_cols=127 Identities=18% Similarity=0.235 Sum_probs=71.6
Q ss_pred hHHHHHHHHHHHHHHh---------C----C---C-CCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeE
Q 007499 297 TAGVALAGLLGTVRAQ---------G----L---S-LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKF 359 (601)
Q Consensus 297 Taav~LAgll~Alr~~---------g----~---~-l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i 359 (601)
+|=-+++-+|+..|.. | . + -.+|.+.+|.|+|.|..|..+|+.+... |+ ++
T Consensus 130 vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~~-----G~-------~V 197 (340)
T 4dgs_A 130 VADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEAF-----GM-------SV 197 (340)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHTT-----TC-------EE
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHHC-----CC-------EE
Confidence 4555677777777631 1 0 1 1355569999999999999999988643 43 68
Q ss_pred EEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCC
Q 007499 360 FLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVK 435 (601)
Q Consensus 360 ~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft~evv~~Ma~~~~er 435 (601)
+.+|+..- . .. .+ ....+|.|+++. .|+++=+- ...+.++++.++.|. +.
T Consensus 198 ~~~dr~~~----~-~~-----~~----------~~~~sl~ell~~--aDvVil~vP~t~~t~~li~~~~l~~mk----~g 251 (340)
T 4dgs_A 198 RYWNRSTL----S-GV-----DW----------IAHQSPVDLARD--SDVLAVCVAASAATQNIVDASLLQALG----PE 251 (340)
T ss_dssp EEECSSCC----T-TS-----CC----------EECSSHHHHHHT--CSEEEECC----------CHHHHHHTT----TT
T ss_pred EEEcCCcc----c-cc-----Cc----------eecCCHHHHHhc--CCEEEEeCCCCHHHHHHhhHHHHhcCC----CC
Confidence 88887421 0 00 01 012579999987 79887432 124788999999994 56
Q ss_pred CeEEecCCCCCccCCCHHHHhcccCCcE
Q 007499 436 PAIFAMSNPTMNAECTAADAFKHAGENI 463 (601)
Q Consensus 436 PIIFaLSNPt~~aE~tpeda~~wt~Gra 463 (601)
-++.=.|+=..--|-.-.+|++ +|+.
T Consensus 252 ailIN~aRG~vvde~aL~~aL~--~g~i 277 (340)
T 4dgs_A 252 GIVVNVARGNVVDEDALIEALK--SGTI 277 (340)
T ss_dssp CEEEECSCC----------------CCS
T ss_pred CEEEECCCCcccCHHHHHHHHH--cCCc
Confidence 7888888755433444445543 4553
No 99
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=84.19 E-value=1.6 Score=46.96 Aligned_cols=101 Identities=15% Similarity=0.163 Sum_probs=61.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
.+|.|+|+|..|..+|..|.. .|. +++++|+.-- .+...+..+. . .+.....++.|+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~-----~G~-------~V~v~dr~~~------~~~~l~~~~~--~---~gi~~~~s~~e~ 62 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVES-----RGY-------TVAIYNRTTS------KTEEVFKEHQ--D---KNLVFTKTLEEF 62 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSHH------HHHHHHHHTT--T---SCEEECSSHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHh-----CCC-------EEEEEcCCHH------HHHHHHHhCc--C---CCeEEeCCHHHH
Confidence 689999999999999988865 343 5778886411 1111111110 0 001123578888
Q ss_pred hccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 402 VRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 402 V~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
++.. ++|++| ++..++...+++++.+.....+..||.-+||-.+
T Consensus 63 v~~l~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~~ 107 (474)
T 2iz1_A 63 VGSLEKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTHF 107 (474)
T ss_dssp HHTBCSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred HhhccCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCCH
Confidence 8753 478777 4444455567788777543345568888888653
No 100
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=84.15 E-value=2.8 Score=44.16 Aligned_cols=132 Identities=21% Similarity=0.205 Sum_probs=80.8
Q ss_pred hhHHHHHHHHHHHHHH---------hCC---------CCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcC
Q 007499 296 GTAGVALAGLLGTVRA---------QGL---------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARN 357 (601)
Q Consensus 296 GTaav~LAgll~Alr~---------~g~---------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~ 357 (601)
.+|=-+++-+|+..|- .|. .-.+|.+.+|.|+|.|..|-.+|+.+.. .|+
T Consensus 133 ~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~-----fG~------- 200 (365)
T 4hy3_A 133 PVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSG-----FRA------- 200 (365)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTT-----SCC-------
T ss_pred HHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhh-----CCC-------
Confidence 3455577777777762 121 1235666999999999999999997754 243
Q ss_pred eEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEee----cCCCCCCCHHHHHHhhhcCC
Q 007499 358 KFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGL----SGVGGVFNEEVLKAMRESDS 433 (601)
Q Consensus 358 ~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~----S~~~g~Ft~evv~~Ma~~~~ 433 (601)
+++.+|+.. ... ....... ...+|.|+++. .|+++=. ....+.++++.++.|.
T Consensus 201 ~V~~~d~~~---------~~~--~~~~~g~------~~~~l~ell~~--aDvV~l~~Plt~~T~~li~~~~l~~mk---- 257 (365)
T 4hy3_A 201 RIRVFDPWL---------PRS--MLEENGV------EPASLEDVLTK--SDFIFVVAAVTSENKRFLGAEAFSSMR---- 257 (365)
T ss_dssp EEEEECSSS---------CHH--HHHHTTC------EECCHHHHHHS--CSEEEECSCSSCC---CCCHHHHHTSC----
T ss_pred EEEEECCCC---------CHH--HHhhcCe------eeCCHHHHHhc--CCEEEEcCcCCHHHHhhcCHHHHhcCC----
Confidence 688888641 111 0011100 12479999987 7998842 2235789999999994
Q ss_pred CCCeEEecCCCCCccCCCHHHHhcccCCcEE
Q 007499 434 VKPAIFAMSNPTMNAECTAADAFKHAGENIV 464 (601)
Q Consensus 434 erPIIFaLSNPt~~aE~tpeda~~wt~Grai 464 (601)
+..|+.=.|.-..--|-.-.+|++ +|+.-
T Consensus 258 ~gailIN~aRG~~vde~aL~~aL~--~g~i~ 286 (365)
T 4hy3_A 258 RGAAFILLSRADVVDFDALMAAVS--SGHIV 286 (365)
T ss_dssp TTCEEEECSCGGGSCHHHHHHHHH--TTSSE
T ss_pred CCcEEEECcCCchhCHHHHHHHHH--cCCce
Confidence 577888888644322333334443 56644
No 101
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=84.09 E-value=1.3 Score=45.56 Aligned_cols=114 Identities=15% Similarity=0.217 Sum_probs=62.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhh-----ccccccCCCC-CcccC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAA-----PFAKDPGDFM-GLREG 395 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~-----~fa~~~~~~~-~~~~~ 395 (601)
.||.|+|+|..|.++|..|..+... .. .-..+++++|+..-+. .+..+...+. .|-. ...+. +..-.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~-~~----~~~~~V~~~~r~~~~~-~~~~~~~l~~~~~~~~~~~-~~~~~~~i~~~ 94 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKN-NY----LFENEVRMWIRDEFVN-GERMVDIINNKHENTKYLK-GVPLPHNIVAH 94 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHH-CT----TBCSCEEEECCSCC----CCHHHHHHHHCBCTTTST-TCBCCTTEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCc-cC----CCCCeEEEEECChhhh-hHHHHHHHHhcCcccccCC-cccCcCCeEEE
Confidence 4799999999999999999876421 00 0003688888753210 0000111000 0000 00000 00112
Q ss_pred CCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhh----cCCCCCeEEecCCCCC
Q 007499 396 ASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRE----SDSVKPAIFAMSNPTM 446 (601)
Q Consensus 396 ~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~----~~~erPIIFaLSNPt~ 446 (601)
.++.|+++. +|++| ++. +.-..+++++.+.. ...+..+|..++|-.+
T Consensus 95 ~~~~ea~~~--aDvVi-lav-~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 95 SDLASVIND--ADLLI-FIV-PCQYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp SSTHHHHTT--CSEEE-ECC-CHHHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred CCHHHHHcC--CCEEE-EcC-CHHHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 467888876 78766 332 33567888888753 2345668888998654
No 102
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=84.04 E-value=1.7 Score=46.99 Aligned_cols=101 Identities=17% Similarity=0.221 Sum_probs=60.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhcccc-ccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK-DPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~-~~~~~~~~~~~~~L~e 400 (601)
.+|.|+|+|..|..+|..|.. .|. +++++|+..= .+. .+.. .... .+.....++.|
T Consensus 3 m~IgvIG~G~mG~~lA~~La~-----~G~-------~V~v~dr~~~------~~~----~l~~~~~~g-~gi~~~~~~~e 59 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMND-----HGF-------VVCAFNRTVS------KVD----DFLANEAKG-TKVLGAHSLEE 59 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSTH------HHH----HHHHTTTTT-SSCEECSSHHH
T ss_pred CeEEEEChHHHHHHHHHHHHH-----CCC-------eEEEEeCCHH------HHH----HHHhccccC-CCeEEeCCHHH
Confidence 579999999999999988865 343 5888887411 111 1111 0000 00112357888
Q ss_pred Hhccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 401 VVRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 401 ~V~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
+++.+ ++|++| ++..++...+++++.+.....+.-||+-+||-.+
T Consensus 60 ~v~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~ 105 (482)
T 2pgd_A 60 MVSKLKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEY 105 (482)
T ss_dssp HHHHBCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCCH
T ss_pred HHhhccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCCH
Confidence 88632 488877 4444454567788776543344568888988664
No 103
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=83.97 E-value=4.1 Score=41.45 Aligned_cols=114 Identities=22% Similarity=0.248 Sum_probs=73.5
Q ss_pred hhHHHHHHHHHHHHHHh---------C------CCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEE
Q 007499 296 GTAGVALAGLLGTVRAQ---------G------LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF 360 (601)
Q Consensus 296 GTaav~LAgll~Alr~~---------g------~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~ 360 (601)
.+|=-+++.+|+..|.. | ..-.+|.+.+|.|+|.|..|..+|+.+... |+ +++
T Consensus 102 ~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-----G~-------~V~ 169 (307)
T 1wwk_A 102 SVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANAL-----GM-------NIL 169 (307)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEE
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHHHHHC-----CC-------EEE
Confidence 34445788888877631 1 011345559999999999999999988653 43 688
Q ss_pred EEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecC----CCCCCCHHHHHHhhhcCCCCC
Q 007499 361 LLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKP 436 (601)
Q Consensus 361 lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~----~~g~Ft~evv~~Ma~~~~erP 436 (601)
.+|+.. .. ..+.... ....+|.|+++. .|+++=+-- ..+.++++.++.|. +.-
T Consensus 170 ~~d~~~---------~~---~~~~~~g-----~~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~mk----~ga 226 (307)
T 1wwk_A 170 LYDPYP---------NE---ERAKEVN-----GKFVDLETLLKE--SDVVTIHVPLVESTYHLINEERLKLMK----KTA 226 (307)
T ss_dssp EECSSC---------CH---HHHHHTT-----CEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHHHSC----TTC
T ss_pred EECCCC---------Ch---hhHhhcC-----ccccCHHHHHhh--CCEEEEecCCChHHhhhcCHHHHhcCC----CCe
Confidence 888741 11 0111100 012369999886 798874421 24789999999993 467
Q ss_pred eEEecCCC
Q 007499 437 AIFAMSNP 444 (601)
Q Consensus 437 IIFaLSNP 444 (601)
++.=.|.-
T Consensus 227 ~lin~arg 234 (307)
T 1wwk_A 227 ILINTSRG 234 (307)
T ss_dssp EEEECSCG
T ss_pred EEEECCCC
Confidence 88877773
No 104
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=83.90 E-value=2.3 Score=44.22 Aligned_cols=105 Identities=17% Similarity=0.164 Sum_probs=59.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhh--hccccccCCCC-CcccCCCH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAA--APFAKDPGDFM-GLREGASL 398 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k--~~fa~~~~~~~-~~~~~~~L 398 (601)
.||.|+|+|+-|..+|..|... | .+++++|++--..+ .+.... ..|-.. ..+. ...-..++
T Consensus 30 mkI~VIGaG~mG~alA~~La~~-----G-------~~V~l~~r~~~~~~---~i~~~~~~~~~l~g-~~l~~~i~~t~d~ 93 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK-----G-------QKVRLWSYESDHVD---EMQAEGVNNRYLPN-YPFPETLKAYCDL 93 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT-----T-------CCEEEECSCHHHHH---HHHHHSSBTTTBTT-CCCCTTEEEESCH
T ss_pred CeEEEECccHHHHHHHHHHHHC-----C-------CeEEEEeCCHHHHH---HHHHcCCCcccCCC-CccCCCeEEECCH
Confidence 6899999999999999888753 4 25778887421100 010000 001000 0000 00113578
Q ss_pred HHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 399 LEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 399 ~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
.|+++. +|++| ++. |-.+.+++++.++....+..+|..++|-..
T Consensus 94 ~ea~~~--aDvVi-laV-p~~~~~~vl~~i~~~l~~~~ivvs~~kGi~ 137 (356)
T 3k96_A 94 KASLEG--VTDIL-IVV-PSFAFHEVITRMKPLIDAKTRIAWGTKGLA 137 (356)
T ss_dssp HHHHTT--CCEEE-ECC-CHHHHHHHHHHHGGGCCTTCEEEECCCSCB
T ss_pred HHHHhc--CCEEE-ECC-CHHHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 888876 67766 332 334677888887654445667888888654
No 105
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=83.79 E-value=4.1 Score=41.69 Aligned_cols=124 Identities=19% Similarity=0.211 Sum_probs=76.2
Q ss_pred cCCccccCc---chhHHHHHHHHHHHHHHh---------CC-----C----CCCCCCceEEEeCcchHHHHHHHHHHHHH
Q 007499 286 RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL-----S----LTDFADQKIVVVGAGSAGLGVLKMAVQAA 344 (601)
Q Consensus 286 ~~~~FnDDi---QGTaav~LAgll~Alr~~---------g~-----~----l~dl~~~riv~~GAGsAg~GiA~ll~~~~ 344 (601)
.+++.|--- +.+|=-+++.+|+..|.. |. + -.+|.+.+|.|+|.|..|..+|+.+..
T Consensus 99 gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~-- 176 (330)
T 2gcg_A 99 GIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKP-- 176 (330)
T ss_dssp TCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECCSHHHHHHHHHHGG--
T ss_pred CceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECcCHHHHHHHHHHHH--
Confidence 366666532 334445788888887732 11 0 035566999999999999999988764
Q ss_pred HHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeec-C---CCCCC
Q 007499 345 ARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS-G---VGGVF 420 (601)
Q Consensus 345 ~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S-~---~~g~F 420 (601)
.|+ +++.+|++.- .....+ .+ .. ...++.|+++. .|++|=+- . ..+.+
T Consensus 177 ---~G~-------~V~~~d~~~~------~~~~~~-~~---g~------~~~~l~e~l~~--aDvVi~~vp~~~~t~~~i 228 (330)
T 2gcg_A 177 ---FGV-------QRFLYTGRQP------RPEEAA-EF---QA------EFVSTPELAAQ--SDFIVVACSLTPATEGLC 228 (330)
T ss_dssp ---GTC-------CEEEEESSSC------CHHHHH-TT---TC------EECCHHHHHHH--CSEEEECCCCCTTTTTCB
T ss_pred ---CCC-------EEEEECCCCc------chhHHH-hc---Cc------eeCCHHHHHhh--CCEEEEeCCCChHHHHhh
Confidence 343 5888887411 011110 00 00 11278898887 78877432 1 24678
Q ss_pred CHHHHHHhhhcCCCCCeEEecCC
Q 007499 421 NEEVLKAMRESDSVKPAIFAMSN 443 (601)
Q Consensus 421 t~evv~~Ma~~~~erPIIFaLSN 443 (601)
++++++.|. +..++.-.|+
T Consensus 229 ~~~~~~~mk----~gailIn~sr 247 (330)
T 2gcg_A 229 NKDFFQKMK----ETAVFINISR 247 (330)
T ss_dssp SHHHHHHSC----TTCEEEECSC
T ss_pred CHHHHhcCC----CCcEEEECCC
Confidence 888888883 4567766665
No 106
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=83.78 E-value=0.56 Score=52.84 Aligned_cols=35 Identities=23% Similarity=0.415 Sum_probs=30.6
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 321 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 321 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
+.||+|+|||..|.-+|+.|+.+++ .+|.++|.+=
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGV-----------G~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGV-----------RKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-----------CEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-----------CEEEEEcCCC
Confidence 3999999999999999999987644 6899999973
No 107
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=83.59 E-value=2.5 Score=46.15 Aligned_cols=102 Identities=16% Similarity=0.187 Sum_probs=63.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
.+|.|+|+|..|..+|..|... |. +++++|++- +.-..++.....-.......++.|+
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~~----------~~~~~l~~~g~~g~~i~~~~s~~e~ 62 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTV----------SKVDDFLANEAKGTKVVGAQSLKEM 62 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSST----------HHHHHHHHTTTTTSSCEECSSHHHH
T ss_pred CEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCCH----------HHHHHHHhcccCCCceeccCCHHHH
Confidence 6899999999999999888753 53 588888741 1111222110000000113678998
Q ss_pred hccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 402 VRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 402 V~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
++.+ +||++| ++..++...+++++.+.....+..||.-.||-.+
T Consensus 63 v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~~ 107 (484)
T 4gwg_A 63 VSKLKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEY 107 (484)
T ss_dssp HHTBCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred HhhccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCCc
Confidence 8754 478776 4434455667888887654567789998988653
No 108
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=83.43 E-value=1.3 Score=45.25 Aligned_cols=121 Identities=18% Similarity=0.148 Sum_probs=68.1
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC--cc---ccCCCCCCChhhhccccccCCCCCcccC
Q 007499 322 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD--GL---ITKERKNLDPAAAPFAKDPGDFMGLREG 395 (601)
Q Consensus 322 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~--GL---i~~~r~~l~~~k~~fa~~~~~~~~~~~~ 395 (601)
.||+|.|| |..|..++..|+. .|+-..+-...++++|.+ .. +.....+|.+.-.+|..+. ...
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i------~~~ 74 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGM------TAH 74 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEE------EEE
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcE------EEe
Confidence 69999998 9999888776654 343111112369999975 10 0000001111000121110 123
Q ss_pred CCHHHHhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCC-CCCeEEecCCCCCccCCCHHHHhccc
Q 007499 396 ASLLEVVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDS-VKPAIFAMSNPTMNAECTAADAFKHA 459 (601)
Q Consensus 396 ~~L~e~V~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~~-erPIIFaLSNPt~~aE~tpeda~~wt 459 (601)
.++.+++++ .|++|=+.+.+ |- .++++++.+.+ ++ ...+|+-.|||.. .+..-+.+.+
T Consensus 75 ~~~~~al~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~-~~~p~a~ii~~SNPv~---~~t~~~~~~~ 147 (329)
T 1b8p_A 75 ADPMTAFKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDA-VASRNIKVLVVGNPAN---TNAYIAMKSA 147 (329)
T ss_dssp SSHHHHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HSCTTCEEEECSSSHH---HHHHHHHHTC
T ss_pred cCcHHHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hcCCCeEEEEccCchH---HHHHHHHHHc
Confidence 568999988 78888555443 31 25678888864 65 7777777899984 3344444433
No 109
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=83.40 E-value=8.2 Score=39.22 Aligned_cols=160 Identities=16% Similarity=0.169 Sum_probs=93.2
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCC
Q 007499 317 TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGA 396 (601)
Q Consensus 317 ~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~ 396 (601)
.+|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+..- ... .++ ...
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~dr~~~------~~~-----~~~---------~~~ 165 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYTRSSV------DQN-----VDV---------ISE 165 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSCC------CTT-----CSE---------ECS
T ss_pred eeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEecccc------ccc-----ccc---------ccC
Confidence 456669999999999999999998764 43 6888887521 010 011 124
Q ss_pred CHHHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCC
Q 007499 397 SLLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFE 472 (601)
Q Consensus 397 ~L~e~V~~vkptvLIG~S----~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai~AsGSPf~ 472 (601)
+|.|+++. .|+++=+- ...+.++++.++.|. +..+|.=.|.-..--|---.+|++ +|+.-.|.=--|.
T Consensus 166 ~l~ell~~--aDiV~l~~P~t~~t~~li~~~~l~~mk----~gailIN~aRG~~vd~~aL~~aL~--~g~i~ga~lDV~~ 237 (290)
T 3gvx_A 166 SPADLFRQ--SDFVLIAIPLTDKTRGMVNSRLLANAR----KNLTIVNVARADVVSKPDMIGFLK--ERSDVWYLSDVWW 237 (290)
T ss_dssp SHHHHHHH--CSEEEECCCCCTTTTTCBSHHHHTTCC----TTCEEEECSCGGGBCHHHHHHHHH--HCTTCEEEESCCT
T ss_pred ChHHHhhc--cCeEEEEeeccccchhhhhHHHHhhhh----cCceEEEeehhcccCCcchhhhhh--hccceEEeecccc
Confidence 79999987 78877432 224789999999993 577888888644422333334443 3443332111111
Q ss_pred ceecCCCeeeecccccccccchhhHHHHHHcCCcccCHHHHHHHHHHHhccCC
Q 007499 473 NVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMT 525 (601)
Q Consensus 473 pv~~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~itd~m~~aAA~aLA~~v~ 525 (601)
+ +- . ..--+..|+.+-|=++= .....-.+.|...+++-|.....
T Consensus 238 ~-EP--~--~pL~~~~nvilTPHiag----~~t~e~~~~~~~~~~~ni~~~~~ 281 (290)
T 3gvx_A 238 N-EP--E--ITETNLRNAILSPHVAG----GMSGEIMDIAIQLAFENVRNFFE 281 (290)
T ss_dssp T-TT--S--CCSCCCSSEEECCSCSS----CBTTBCCHHHHHHHHHHHHHHTC
T ss_pred C-Cc--c--cchhhhhhhhcCccccC----CccchHHHHHHHHHHHHHHhhhc
Confidence 0 00 0 11123457777776631 11234456677777777666554
No 110
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=83.33 E-value=1.1 Score=45.15 Aligned_cols=48 Identities=17% Similarity=0.336 Sum_probs=34.6
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 303 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 303 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.|+..+++..|.. .. .+++|+|||.+|.+++..|.. .|. ++|+++++.
T Consensus 105 ~G~~~~l~~~~~~-~~---~~vlvlGaGgaarav~~~L~~-----~G~------~~i~v~nRt 152 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KN---AKVIVHGSGGMAKAVVAAFKN-----SGF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHHTTCC-TT---SCEEEECSSTTHHHHHHHHHH-----TTC------CCEEEECSC
T ss_pred HHHHHHHHHhCCC-CC---CEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 3455666655543 44 899999999999888877654 354 579988874
No 111
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=83.32 E-value=1.9 Score=45.92 Aligned_cols=105 Identities=13% Similarity=0.288 Sum_probs=54.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChh-hhcCeEEEEecCc-------cccCCCC---CCChhhhccccccCCCC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDA-FARNKFFLLDKDG-------LITKERK---NLDPAAAPFAKDPGDFM 390 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~e-eA~~~i~lvD~~G-------Li~~~r~---~l~~~k~~fa~~~~~~~ 390 (601)
.||.|+|||+=|+.+|..|.+... +...- +-.=++|..|..= .|...+. .|+..+.+ +.
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~---~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp-----~~-- 104 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCK---GYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLP-----DN-- 104 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHH---HCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCC-----SS--
T ss_pred CeEEEECcCHHHHHHHHHHHHcCC---CccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCC-----CC--
Confidence 599999999999999999988643 11000 0001466555420 0112111 12222211 00
Q ss_pred CcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEec
Q 007499 391 GLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAM 441 (601)
Q Consensus 391 ~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaL 441 (601)
..-..+|.|++++ .|++|= . +|-.|-+++++.+.....+..+|..+
T Consensus 105 -i~~t~dl~~al~~--ad~ii~-a-vPs~~~r~~l~~l~~~~~~~~~iv~~ 150 (391)
T 4fgw_A 105 -LVANPDLIDSVKD--VDIIVF-N-IPHQFLPRICSQLKGHVDSHVRAISC 150 (391)
T ss_dssp -EEEESCHHHHHTT--CSEEEE-C-SCGGGHHHHHHHHTTTSCTTCEEEEC
T ss_pred -cEEeCCHHHHHhc--CCEEEE-E-CChhhhHHHHHHhccccCCCceeEEe
Confidence 1123578888887 566552 1 24457778888775422333334333
No 112
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=83.31 E-value=0.52 Score=46.48 Aligned_cols=34 Identities=29% Similarity=0.494 Sum_probs=29.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.||+|+|+|..|..+|..|+.+ |+ ++|.++|.+-
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCCC
Confidence 8999999999999999988875 43 5899999973
No 113
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=83.10 E-value=7.6 Score=40.44 Aligned_cols=133 Identities=14% Similarity=0.173 Sum_probs=85.4
Q ss_pred CCccccCc---chhHHHHHHHHHHHHHH----------hCC-------CCCCCCCceEEEeCcchHHHHHHHHHHHHHHH
Q 007499 287 FCMFNDDI---QGTAGVALAGLLGTVRA----------QGL-------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAAR 346 (601)
Q Consensus 287 ~~~FnDDi---QGTaav~LAgll~Alr~----------~g~-------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~ 346 (601)
+.+.|--- +.+|=-+++-+|+..|- .|. .-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 94 I~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~--- 170 (343)
T 2yq5_A 94 LLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAM--- 170 (343)
T ss_dssp CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhC---
Confidence 66666522 34555678888887762 231 12345569999999999999999988753
Q ss_pred hcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeec----CCCCCCCH
Q 007499 347 MAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNE 422 (601)
Q Consensus 347 ~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft~ 422 (601)
|+ +++.+|+..- +. . ... ....+|.|+++. .|+++=.- ...+.|++
T Consensus 171 --G~-------~V~~~d~~~~---------~~---~-~~~------~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~ 220 (343)
T 2yq5_A 171 --GA-------KVIAYDVAYN---------PE---F-EPF------LTYTDFDTVLKE--ADIVSLHTPLFPSTENMIGE 220 (343)
T ss_dssp --TC-------EEEEECSSCC---------GG---G-TTT------CEECCHHHHHHH--CSEEEECCCCCTTTTTCBCH
T ss_pred --CC-------EEEEECCChh---------hh---h-hcc------ccccCHHHHHhc--CCEEEEcCCCCHHHHHHhhH
Confidence 43 6888888521 10 0 000 012479999987 79888542 12488999
Q ss_pred HHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHh
Q 007499 423 EVLKAMRESDSVKPAIFAMSNPTMNAECTAADAF 456 (601)
Q Consensus 423 evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~ 456 (601)
+.++.|. +..++.=.|.-..--|-.-.+|+
T Consensus 221 ~~l~~mk----~gailIN~aRg~~vd~~aL~~aL 250 (343)
T 2yq5_A 221 KQLKEMK----KSAYLINCARGELVDTGALIKAL 250 (343)
T ss_dssp HHHHHSC----TTCEEEECSCGGGBCHHHHHHHH
T ss_pred HHHhhCC----CCcEEEECCCChhhhHHHHHHHH
Confidence 9999993 57788877764442233333444
No 114
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=82.94 E-value=0.9 Score=44.15 Aligned_cols=96 Identities=15% Similarity=0.146 Sum_probs=57.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
.||.|+|+|..|..+|..+... |. +.++++|++.- .+. .+++... .....++.|+
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~~~------~~~----~~~~~~g----~~~~~~~~~~ 65 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRTEE------SAR----ELAQKVE----AEYTTDLAEV 65 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSHH------HHH----HHHHHTT----CEEESCGGGS
T ss_pred CeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCCHH------HHH----HHHHHcC----CceeCCHHHH
Confidence 7899999999999999887653 43 24788886410 111 1111100 0012356666
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 402 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 402 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
++. +|++|=+. .+.. .+++++.+.....+..+|.-+||-.+
T Consensus 66 ~~~--~Dvvi~av-~~~~-~~~v~~~l~~~~~~~~ivv~~s~~~~ 106 (266)
T 3d1l_A 66 NPY--AKLYIVSL-KDSA-FAELLQGIVEGKREEALMVHTAGSIP 106 (266)
T ss_dssp CSC--CSEEEECC-CHHH-HHHHHHHHHTTCCTTCEEEECCTTSC
T ss_pred hcC--CCEEEEec-CHHH-HHHHHHHHHhhcCCCcEEEECCCCCc
Confidence 664 78877433 3333 37888877542335678888888555
No 115
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=82.91 E-value=1.3 Score=45.00 Aligned_cols=113 Identities=17% Similarity=0.205 Sum_probs=66.3
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec--CccccCC-CCCCChhhhccccccCCCCCcccCCCH
Q 007499 323 KIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK--DGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASL 398 (601)
Q Consensus 323 riv~~G-AGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~--~GLi~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L 398 (601)
||+|.| +|..|..++..|+. .|+- ..++|+|. +-=-.+. ..+|.+... +.++. .. ...+
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~-----~~~~-----~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~-~v----~~~~- 64 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIAL-----RDIA-----DEVVFVDIPDKEDDTVGQAADTNHGIA-YDSNT-RV----RQGG- 64 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TTCC-----SEEEEECCGGGHHHHHHHHHHHHHHHT-TTCCC-EE----EECC-
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCCC-----CEEEEEcCCCChhhHHHHHHHHHHHHh-hCCCc-EE----EeCC-
Confidence 899999 99999998877654 3431 46999997 3100000 012222211 11110 00 0122
Q ss_pred HHHhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007499 399 LEVVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 458 (601)
Q Consensus 399 ~e~V~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~w 458 (601)
.+++++ .|++|=+.+.+ |- .++++++.|.+ ++.+.+|+--|||.. ...+-+++.
T Consensus 65 ~~a~~~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~-~~p~~~viv~SNPv~---~~~~~~~~~ 132 (303)
T 1o6z_A 65 YEDTAG--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDE-HNDDYISLTTSNPVD---LLNRHLYEA 132 (303)
T ss_dssp GGGGTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHT-TCSCCEEEECCSSHH---HHHHHHHHH
T ss_pred HHHhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCcEEEEeCChHH---HHHHHHHHH
Confidence 566777 78888555544 32 35678888854 888999999999985 444555453
No 116
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=82.87 E-value=3.4 Score=41.65 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=27.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||.|+|+|..|.++|..|... |. ++++++|++
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCC
Confidence 6899999999999999998764 42 378889884
No 117
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=82.83 E-value=0.52 Score=46.65 Aligned_cols=33 Identities=24% Similarity=0.448 Sum_probs=28.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||+|+|+|..|.-+|..|+.+ |+ ++|.++|.+
T Consensus 29 ~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d 61 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDD 61 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCC
T ss_pred CcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 9999999999999998888765 44 689999997
No 118
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=82.81 E-value=2.6 Score=44.09 Aligned_cols=144 Identities=17% Similarity=0.232 Sum_probs=85.4
Q ss_pred cCCccccCc---chhHHHHHHHHHHHHHH--------------------hCCCCCCCCCceEEEeCcchHHHHHHHHHHH
Q 007499 286 RFCMFNDDI---QGTAGVALAGLLGTVRA--------------------QGLSLTDFADQKIVVVGAGSAGLGVLKMAVQ 342 (601)
Q Consensus 286 ~~~~FnDDi---QGTaav~LAgll~Alr~--------------------~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~ 342 (601)
.+.+.|--- +.+|=-+++.+|+..|- .+. +|.+.+|.|+|.|..|..+|+.+..
T Consensus 109 gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~---~l~g~tvgIIG~G~IG~~vA~~l~~ 185 (364)
T 2j6i_A 109 KISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAY---DIEGKTIATIGAGRIGYRVLERLVP 185 (364)
T ss_dssp CCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCC---CSTTCEEEEECCSHHHHHHHHHHGG
T ss_pred CEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcc---cCCCCEEEEECcCHHHHHHHHHHHh
Confidence 355555322 34455578888888762 233 4455999999999999999998764
Q ss_pred HHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecC----CCC
Q 007499 343 AAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGG 418 (601)
Q Consensus 343 ~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~----~~g 418 (601)
. |+ ++++.+|+... ... .+.... .....+|.|+++. .|+++=+-- ..+
T Consensus 186 ~-----G~------~~V~~~d~~~~--------~~~---~~~~~g----~~~~~~l~ell~~--aDvV~l~~P~t~~t~~ 237 (364)
T 2j6i_A 186 F-----NP------KELLYYDYQAL--------PKD---AEEKVG----ARRVENIEELVAQ--ADIVTVNAPLHAGTKG 237 (364)
T ss_dssp G-----CC------SEEEEECSSCC--------CHH---HHHHTT----EEECSSHHHHHHT--CSEEEECCCCSTTTTT
T ss_pred C-----CC------cEEEEECCCcc--------chh---HHHhcC----cEecCCHHHHHhc--CCEEEECCCCChHHHH
Confidence 3 43 23888886421 111 111000 0012469999886 798874321 127
Q ss_pred CCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEE
Q 007499 419 VFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA 466 (601)
Q Consensus 419 ~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai~A 466 (601)
.++++.+..|. +..+|.-.|+-..--|-.-.+|++ +|+.--|
T Consensus 238 li~~~~l~~mk----~ga~lIn~arG~~vd~~aL~~aL~--~g~i~gA 279 (364)
T 2j6i_A 238 LINKELLSKFK----KGAWLVNTARGAICVAEDVAAALE--SGQLRGY 279 (364)
T ss_dssp CBCHHHHTTSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEE
T ss_pred HhCHHHHhhCC----CCCEEEECCCCchhCHHHHHHHHH--cCCCcEE
Confidence 89999999983 567888888744322332334433 4554433
No 119
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=82.79 E-value=2 Score=41.65 Aligned_cols=100 Identities=16% Similarity=0.117 Sum_probs=56.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHh
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVV 402 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V 402 (601)
||.|+|+|..|..+|..|... | .+++++|++- . .+...+.... ....+.......+ .+++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~----~--~~~~l~~~~~-~~~~~~~~~~~~~-~~~~ 61 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----G-------HEVQGWLRVP----Q--PYCSVNLVET-DGSIFNESLTAND-PDFL 61 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSC----C--SEEEEEEECT-TSCEEEEEEEESC-HHHH
T ss_pred eEEEECcCHHHHHHHHHHHhC-----C-------CCEEEEEcCc----c--ceeeEEEEcC-CCceeeeeeeecC-cccc
Confidence 799999999999999888653 4 2688888752 1 1111000000 0000000001122 4666
Q ss_pred cccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 403 RKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 403 ~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
+. +|++| ++..+. ..+++++.++....+..+|..++|...
T Consensus 62 ~~--~d~vi-~~v~~~-~~~~v~~~l~~~l~~~~~vv~~~~g~~ 101 (291)
T 1ks9_A 62 AT--SDLLL-VTLKAW-QVSDAVKSLASTLPVTTPILLIHNGMG 101 (291)
T ss_dssp HT--CSEEE-ECSCGG-GHHHHHHHHHTTSCTTSCEEEECSSSC
T ss_pred CC--CCEEE-EEecHH-hHHHHHHHHHhhCCCCCEEEEecCCCC
Confidence 65 78877 333333 358999888653445667777899764
No 120
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=82.73 E-value=3.1 Score=43.00 Aligned_cols=178 Identities=14% Similarity=0.232 Sum_probs=100.5
Q ss_pred hHHHHHHHHHHHHHHh---------C----CCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEe
Q 007499 297 TAGVALAGLLGTVRAQ---------G----LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD 363 (601)
Q Consensus 297 Taav~LAgll~Alr~~---------g----~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD 363 (601)
+|=-+++.+|+..|-. | ....+|.+.+|.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 170 (324)
T 3hg7_A 103 MSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHF-----GM-------KVLGVS 170 (324)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhC-----CC-------EEEEEc
Confidence 3445677777766621 1 122345559999999999999999998654 43 688888
Q ss_pred cCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEE
Q 007499 364 KDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIF 439 (601)
Q Consensus 364 ~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft~evv~~Ma~~~~erPIIF 439 (601)
+.. +. .. .+... ....+|.|+++. .|+++=.- ...+.|+++.++.|. +..|+.
T Consensus 171 r~~---~~---~~----~~~~~-------~~~~~l~ell~~--aDvV~l~lPlt~~T~~li~~~~l~~mk----~gailI 227 (324)
T 3hg7_A 171 RSG---RE---RA----GFDQV-------YQLPALNKMLAQ--ADVIVSVLPATRETHHLFTASRFEHCK----PGAILF 227 (324)
T ss_dssp SSC---CC---CT----TCSEE-------ECGGGHHHHHHT--CSEEEECCCCCSSSTTSBCTTTTTCSC----TTCEEE
T ss_pred CCh---HH---hh----hhhcc-------cccCCHHHHHhh--CCEEEEeCCCCHHHHHHhHHHHHhcCC----CCcEEE
Confidence 764 11 11 11100 012569999987 79887431 224788888888883 577888
Q ss_pred ecCCCCCccCCCHHHHhcccCCcEEEEc-----CCCCCceecCCCeeeecccccccccchhhHHHHHHcCCcccCHHHHH
Q 007499 440 AMSNPTMNAECTAADAFKHAGENIVFAS-----GSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQ 514 (601)
Q Consensus 440 aLSNPt~~aE~tpeda~~wt~Grai~As-----GSPf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~itd~m~~ 514 (601)
=.|.-..--|-.-.+|++ +|+.-.|. .-|.++ . ..--+..|+.+-|=++- .+. ...|..
T Consensus 228 N~aRG~~vde~aL~~aL~--~g~i~ga~lDV~~~EPl~~-----~--~pL~~~~nvilTPHia~------~t~-~~~~~~ 291 (324)
T 3hg7_A 228 NVGRGNAINEGDLLTALR--TGKLGMAVLDVFEQEPLPA-----D--SPLWGQPNLIITPHNSA------YSF-PDDVAQ 291 (324)
T ss_dssp ECSCGGGBCHHHHHHHHH--TTSSSEEEESCCSSSSCCT-----T--CTTTTCTTEEECCSCSS------CCC-HHHHHH
T ss_pred ECCCchhhCHHHHHHHHH--cCCceEEEeccCCCCCCCC-----C--ChhhcCCCEEEeCCCcc------ccH-HHHHHH
Confidence 888644432333334443 45432221 111111 0 00113456777776532 221 245666
Q ss_pred HHHHHHhccCC
Q 007499 515 QAAECLASYMT 525 (601)
Q Consensus 515 aAA~aLA~~v~ 525 (601)
.+++-|.....
T Consensus 292 ~~~~nl~~~~~ 302 (324)
T 3hg7_A 292 IFVRNYIRFID 302 (324)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHc
Confidence 66666666554
No 121
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=82.73 E-value=4.9 Score=41.32 Aligned_cols=123 Identities=18% Similarity=0.153 Sum_probs=80.0
Q ss_pred ccCCccccCcc---hhHHHHHHHHHHHHHH---------hCC-------CCCCCCCceEEEeCcchHHHHHHHHHHHHHH
Q 007499 285 KRFCMFNDDIQ---GTAGVALAGLLGTVRA---------QGL-------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAA 345 (601)
Q Consensus 285 ~~~~~FnDDiQ---GTaav~LAgll~Alr~---------~g~-------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~ 345 (601)
..+.+.|---. .+|=-+++.+|+..|. .|. .-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 91 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 168 (331)
T 1xdw_A 91 LGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGVVGLGRIGRVAAQIFHGM-- 168 (331)
T ss_dssp TTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred CCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEEECcCHHHHHHHHHHHHC--
Confidence 34666664332 3455578888888762 121 11345669999999999999999988753
Q ss_pred HhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEee-c---CCCCCCC
Q 007499 346 RMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGL-S---GVGGVFN 421 (601)
Q Consensus 346 ~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~-S---~~~g~Ft 421 (601)
|+ +++.+|+.. .. .+. .++ ...+|.|+++. .|+++=+ . ...+.++
T Consensus 169 ---G~-------~V~~~d~~~----~~-~~~----~~~----------~~~~l~ell~~--aDvV~~~~p~t~~t~~li~ 217 (331)
T 1xdw_A 169 ---GA-------TVIGEDVFE----IK-GIE----DYC----------TQVSLDEVLEK--SDIITIHAPYIKENGAVVT 217 (331)
T ss_dssp ---TC-------EEEEECSSC----CC-SCT----TTC----------EECCHHHHHHH--CSEEEECCCCCTTTCCSBC
T ss_pred ---CC-------EEEEECCCc----cH-HHH----hcc----------ccCCHHHHHhh--CCEEEEecCCchHHHHHhC
Confidence 43 688888742 11 110 111 12369999987 7988863 1 2347899
Q ss_pred HHHHHHhhhcCCCCCeEEecCCC
Q 007499 422 EEVLKAMRESDSVKPAIFAMSNP 444 (601)
Q Consensus 422 ~evv~~Ma~~~~erPIIFaLSNP 444 (601)
++.++.|. +..++.=.|.-
T Consensus 218 ~~~l~~mk----~ga~lin~srg 236 (331)
T 1xdw_A 218 RDFLKKMK----DGAILVNCARG 236 (331)
T ss_dssp HHHHHTSC----TTEEEEECSCG
T ss_pred HHHHhhCC----CCcEEEECCCc
Confidence 99999993 46788888853
No 122
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=82.49 E-value=1.7 Score=47.83 Aligned_cols=183 Identities=17% Similarity=0.256 Sum_probs=111.0
Q ss_pred CCChhhhhHhHHHHHHHHHHh-C--CCe-E-EeeCCCChH--HHHHHHHhccCC---------ccccCc---------ch
Q 007499 242 RLEGEEYLSIVDEFMEAVHAR-W--PKA-I-FEDFQMKWA--FETLERYRKRFC---------MFNDDI---------QG 296 (601)
Q Consensus 242 R~~g~~Y~~~vdefv~av~~~-~--P~~-l-~EDf~~~~A--f~iL~ryr~~~~---------~FnDDi---------QG 296 (601)
..+..|-..|.-.||+.+.++ + |.. + =+|++..-. --+.+.|+...- +--.-+ .-
T Consensus 135 ~~s~~El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eA 214 (501)
T 3mw9_A 135 NYTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISA 214 (501)
T ss_dssp GSCHHHHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTH
T ss_pred cCCHHHHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCc
Confidence 346678889999999999862 4 654 4 889987532 126778864321 111111 12
Q ss_pred hHHHHHHHHHH------HHHHhCC--CCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccc
Q 007499 297 TAGVALAGLLG------TVRAQGL--SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 368 (601)
Q Consensus 297 Taav~LAgll~------Alr~~g~--~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 368 (601)
||-=+.-++-. +++..|. .|+. .||+|-|.|..|...|+.|.+. |. +-+-+.|++|-|
T Consensus 215 Tg~GV~~~~~~~l~~~~~~~~~G~~~~l~g---~tVaVQG~GNVG~~aa~~L~e~-----Ga------kVVavsDs~G~i 280 (501)
T 3mw9_A 215 TGRGVFHGIENFINEASYMSILGMTPGFGD---KTFVVQGFGNVGLHSMRYLHRF-----GA------KCITVGESDGSI 280 (501)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHTTCCSSSTT---CEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEE
T ss_pred hHHHHHHHHHHHHhhhHHHHHcCCCCCcCC---CEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEcCCceE
Confidence 44333333332 3445675 3566 9999999999999999988763 42 345689999999
Q ss_pred cCCCCCCChhhh-ccccccCCCCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CC
Q 007499 369 TKERKNLDPAAA-PFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PT 445 (601)
Q Consensus 369 ~~~r~~l~~~k~-~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN-Pt 445 (601)
++.. +++..+. .+........+.+....+.+.+-.++.||||=+.. .+..|++-++.+ .-.||.--+| |+
T Consensus 281 yd~~-Gid~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~~DIliPcA~-~n~I~~~na~~l-----~akiV~EgAN~p~ 352 (501)
T 3mw9_A 281 WNPD-GIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAAS-EKQLTKSNAPRV-----KAKIIAEGANGPT 352 (501)
T ss_dssp ECTT-CCCHHHHHHHHHHHSSSTTCTTSEEECSCGGGSCCSEEEECSS-SCCBCTTTGGGC-----CCSEEECCSSSCB
T ss_pred ECCC-CCCHHHHHHHHHhcCCeecccCceeeccccccccceEEeeccc-cCccCHhHHHHc-----CceEEEeCCCCcC
Confidence 9754 3443221 11111000000000000011244678999998887 499999998887 3679999998 54
No 123
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=82.44 E-value=1.8 Score=43.61 Aligned_cols=32 Identities=16% Similarity=0.259 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||.|+|+|..|.++|..|... |. +++++|++
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 53 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRT 53 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 7899999999999999998763 42 68888874
No 124
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=82.44 E-value=5.3 Score=41.05 Aligned_cols=90 Identities=14% Similarity=0.241 Sum_probs=58.8
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCC
Q 007499 318 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 397 (601)
Q Consensus 318 dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~ 397 (601)
+|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+..- . +....+ .. ...+
T Consensus 143 ~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~d~~~~------~--~~~~~~--g~-------~~~~ 193 (333)
T 2d0i_A 143 SLYGKKVGILGMGAIGKAIARRLIP-----FGV-------KLYYWSRHRK------V--NVEKEL--KA-------RYMD 193 (333)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSCC------H--HHHHHH--TE-------EECC
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEECCCcc------h--hhhhhc--Cc-------eecC
Confidence 4555999999999999999998754 343 6888887421 0 110011 00 1136
Q ss_pred HHHHhcccCCcEEEeec-C---CCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 007499 398 LLEVVRKVKPHVLLGLS-G---VGGVFNEEVLKAMRESDSVKPAIFAMSN 443 (601)
Q Consensus 398 L~e~V~~vkptvLIG~S-~---~~g~Ft~evv~~Ma~~~~erPIIFaLSN 443 (601)
|.|+++. .|+++=+- . ..+.++++.++.|. +. ++.-.|.
T Consensus 194 l~e~l~~--aDiVil~vp~~~~t~~~i~~~~~~~mk----~g-ilin~sr 236 (333)
T 2d0i_A 194 IDELLEK--SDIVILALPLTRDTYHIINEERVKKLE----GK-YLVNIGR 236 (333)
T ss_dssp HHHHHHH--CSEEEECCCCCTTTTTSBCHHHHHHTB----TC-EEEECSC
T ss_pred HHHHHhh--CCEEEEcCCCChHHHHHhCHHHHhhCC----CC-EEEECCC
Confidence 8898887 79877432 1 13678888899883 35 7777774
No 125
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=82.43 E-value=6.9 Score=39.90 Aligned_cols=120 Identities=23% Similarity=0.241 Sum_probs=78.3
Q ss_pred CCccccCc---chhHHHHHHHHHHHHHHh---------CC---------CCCCCCCceEEEeCcchHHHHHHHHHHHHHH
Q 007499 287 FCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL---------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAA 345 (601)
Q Consensus 287 ~~~FnDDi---QGTaav~LAgll~Alr~~---------g~---------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~ 345 (601)
+.+.|--- +.+|=-+++.+|+..|.. |. .-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 89 i~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~-- 166 (311)
T 2cuk_A 89 IRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALAF-- 166 (311)
T ss_dssp CEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred cEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHC--
Confidence 55555432 234445788888876632 10 01345669999999999999999988643
Q ss_pred HhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeec----CCCCCCC
Q 007499 346 RMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFN 421 (601)
Q Consensus 346 ~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft 421 (601)
|+ +++.+|+.. .. .. + ...+|.|+++. .|+++=+- ...+.++
T Consensus 167 ---G~-------~V~~~d~~~----~~--~~------~----------~~~~l~ell~~--aDvV~l~~p~~~~t~~li~ 212 (311)
T 2cuk_A 167 ---GM-------RVVYHARTP----KP--LP------Y----------PFLSLEELLKE--ADVVSLHTPLTPETHRLLN 212 (311)
T ss_dssp ---TC-------EEEEECSSC----CS--SS------S----------CBCCHHHHHHH--CSEEEECCCCCTTTTTCBC
T ss_pred ---CC-------EEEEECCCC----cc--cc------c----------ccCCHHHHHhh--CCEEEEeCCCChHHHhhcC
Confidence 43 688888742 11 11 1 12468899887 79888541 2247888
Q ss_pred HHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 422 EEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 422 ~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
++.++.|. +..++.=.|.-..
T Consensus 213 ~~~l~~mk----~ga~lin~srg~~ 233 (311)
T 2cuk_A 213 RERLFAMK----RGAILLNTARGAL 233 (311)
T ss_dssp HHHHTTSC----TTCEEEECSCGGG
T ss_pred HHHHhhCC----CCcEEEECCCCCc
Confidence 88888883 5778888887443
No 126
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=82.23 E-value=5.5 Score=41.58 Aligned_cols=176 Identities=19% Similarity=0.184 Sum_probs=100.1
Q ss_pred cCCccccCc---chhHHHHHHHHHHHHHHh---------C--------CCCCCCCCceEEEeCcchHHHHHHHHHHHHHH
Q 007499 286 RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------G--------LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAA 345 (601)
Q Consensus 286 ~~~~FnDDi---QGTaav~LAgll~Alr~~---------g--------~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~ 345 (601)
.+.+.|--- +.+|=-+++-+|+..|-. | ..-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 109 gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~-- 186 (351)
T 3jtm_A 109 GLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPF-- 186 (351)
T ss_dssp TCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGG--
T ss_pred CeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHHC--
Confidence 355555322 334555788888887631 1 111244459999999999999999988653
Q ss_pred HhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeec----CCCCCCC
Q 007499 346 RMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFN 421 (601)
Q Consensus 346 ~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft 421 (601)
|+ +++.+|+... +.. .+.... .....+|.|+++. .|+++=.- ...+.|+
T Consensus 187 ---G~-------~V~~~dr~~~--------~~~---~~~~~g----~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~ 239 (351)
T 3jtm_A 187 ---GC-------NLLYHDRLQM--------APE---LEKETG----AKFVEDLNEMLPK--CDVIVINMPLTEKTRGMFN 239 (351)
T ss_dssp ---CC-------EEEEECSSCC--------CHH---HHHHHC----CEECSCHHHHGGG--CSEEEECSCCCTTTTTCBS
T ss_pred ---CC-------EEEEeCCCcc--------CHH---HHHhCC----CeEcCCHHHHHhc--CCEEEECCCCCHHHHHhhc
Confidence 43 5888887521 111 111000 0012479999988 79887431 2247899
Q ss_pred HHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCceecCCCeeeecccccccccchhhHH
Q 007499 422 EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGL 498 (601)
Q Consensus 422 ~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai~AsGSPf~pv~~~~G~~~~p~Q~NN~~iFPGigl 498 (601)
++.++.|. +..+|.=.|+-..--|-.-.+|++ +|+.--|.--=|.+-..+.. ..--+..|+.+-|=++-
T Consensus 240 ~~~l~~mk----~gailIN~aRG~~vde~aL~~aL~--~g~i~ga~lDV~~~EP~~~~--~pL~~~~nvilTPHia~ 308 (351)
T 3jtm_A 240 KELIGKLK----KGVLIVNNARGAIMERQAVVDAVE--SGHIGGYSGDVWDPQPAPKD--HPWRYMPNQAMTPHTSG 308 (351)
T ss_dssp HHHHHHSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSSCCTT--CGGGTSTTBCCCCSCGG
T ss_pred HHHHhcCC----CCCEEEECcCchhhCHHHHHHHHH--hCCccEEEeCCCCCCCCCCC--ChhhcCCCEEECCcCCC
Confidence 99999994 577888888754433433444543 56654343222221111101 01123457777787643
No 127
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=82.14 E-value=1.9 Score=43.24 Aligned_cols=100 Identities=14% Similarity=0.103 Sum_probs=54.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhcc---cccc-CC--CCCcccC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPF---AKDP-GD--FMGLREG 395 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~f---a~~~-~~--~~~~~~~ 395 (601)
.||.|+|+|..|..+|..|.. .| .+++++|++.-- +...+... .... .+ .......
T Consensus 5 mki~iiG~G~~G~~~a~~L~~-----~g-------~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLAL-----KG-------QSVLAWDIDAQR------IKEIQDRGAIIAEGPGLAGTAHPDLLT 66 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSCHHH------HHHHHHHTSEEEESSSCCEEECCSEEE
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeCCHHH------HHHHHhcCCeEEeccccccccccceec
Confidence 689999999999999988764 34 258888874210 11111000 0000 00 0000013
Q ss_pred CCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 007499 396 ASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 443 (601)
Q Consensus 396 ~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN 443 (601)
.++.++++. +|++|=+. +....+++++.++....+..+|+.+.|
T Consensus 67 ~~~~~~~~~--~D~vi~~v--~~~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 67 SDIGLAVKD--ADVILIVV--PAIHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp SCHHHHHTT--CSEEEECS--CGGGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred CCHHHHHhc--CCEEEEeC--CchHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 468888765 78776332 233348888887543444566666655
No 128
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=82.08 E-value=2.5 Score=43.15 Aligned_cols=112 Identities=21% Similarity=0.204 Sum_probs=64.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccC---CCCCcccCCCH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPG---DFMGLREGASL 398 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~---~~~~~~~~~~L 398 (601)
.||.|+|||+.|..+|-+|.. .|+- ..|+++|.+ .++ +......+.+..+ ++. . ...+
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~-----~~~~-----~ev~L~Di~----~~~--~~g~~~dl~~~~~~~~~~~-i-~~~~- 68 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMAL-----RQTA-----NELVLIDVF----KEK--AIGEAMDINHGLPFMGQMS-L-YAGD- 68 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCS-----SEEEEECCC---------CCHHHHHHTTSCCCTTCEE-E-C--C-
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCC----hHH--HHHHHHHHHHhHHhcCCeE-E-EECC-
Confidence 689999999999998877654 3431 479999985 111 2211112211100 000 0 0122
Q ss_pred HHHhcccCCcEEEeecCCC---CC-------C----CHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007499 399 LEVVRKVKPHVLLGLSGVG---GV-------F----NEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 458 (601)
Q Consensus 399 ~e~V~~vkptvLIG~S~~~---g~-------F----t~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~w 458 (601)
.+++++ .|++|=+.+.| |- + -+++++.|.+ ++..-+|+-.|||.. .+.+-+++.
T Consensus 69 ~~a~~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~viv~tNPv~---~~~~~~~k~ 136 (318)
T 1y6j_A 69 YSDVKD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMK-YYNHGVILVVSNPVD---IITYMIQKW 136 (318)
T ss_dssp GGGGTT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHH-HCCSCEEEECSSSHH---HHHHHHHHH
T ss_pred HHHhCC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHH-hCCCcEEEEecCcHH---HHHHHHHHH
Confidence 556777 78887544433 31 1 1678888864 788889988999985 444455454
No 129
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=81.99 E-value=1.6 Score=43.16 Aligned_cols=32 Identities=28% Similarity=0.409 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||.|+|+|..|..+|..+... | -+++++|++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----G-------CSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 5899999999999999988753 4 268888874
No 130
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=81.99 E-value=1.5 Score=47.39 Aligned_cols=105 Identities=14% Similarity=0.158 Sum_probs=60.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
.||.|+|+|..|..+|..|.. .|. +++++|+..-- +......+-..... .......++.|+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~-----~G~-------~V~v~dr~~~~------~~~l~~~~g~~~~~-~~i~~~~~~~e~ 62 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAE-----KGF-------KVAVFNRTYSK------SEEFMKANASAPFA-GNLKAFETMEAF 62 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSHHH------HHHHHHHTTTSTTG-GGEEECSCHHHH
T ss_pred CEEEEEChHHHHHHHHHHHHH-----CCC-------EEEEEeCCHHH------HHHHHHhcCCCCCC-CCeEEECCHHHH
Confidence 379999999999999988865 343 58888874210 11111000000000 000123578888
Q ss_pred hccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 402 VRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 402 V~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
++.. ++|++| ++..++...+++++.+.....+.-||.-+||-.+
T Consensus 63 v~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~ 107 (478)
T 1pgj_A 63 AASLKKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHF 107 (478)
T ss_dssp HHHBCSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCH
T ss_pred HhcccCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCCh
Confidence 8753 478877 4433444567788776543445668888998654
No 131
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=81.88 E-value=1.4 Score=44.02 Aligned_cols=49 Identities=18% Similarity=0.218 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 301 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 301 ~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
...|++.+++..+.+++. .+++|+|||.+|.++|..|.+ .| +++++|++
T Consensus 111 d~~G~~~~L~~~~~~l~~---k~vlV~GaGgiG~aia~~L~~-----~G--------~V~v~~r~ 159 (287)
T 1nvt_A 111 DGIGARMALEEEIGRVKD---KNIVIYGAGGAARAVAFELAK-----DN--------NIIIANRT 159 (287)
T ss_dssp HHHHHHHHHHHHHCCCCS---CEEEEECCSHHHHHHHHHHTS-----SS--------EEEEECSS
T ss_pred CHHHHHHHHHHhCCCcCC---CEEEEECchHHHHHHHHHHHH-----CC--------CEEEEECC
Confidence 678899999988887777 999999998665555555432 33 58888874
No 132
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=81.83 E-value=0.77 Score=47.85 Aligned_cols=33 Identities=27% Similarity=0.529 Sum_probs=29.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||+|+|+|..|..+|..|+.+.+ .+|.++|.+
T Consensus 119 ~~VlvvG~GglGs~va~~La~aGv-----------g~i~lvD~D 151 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSGI-----------GEIILIDND 151 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-----------SEEEEEECC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-----------CeEEEECCC
Confidence 999999999999999999887644 689999986
No 133
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=81.75 E-value=2.7 Score=43.54 Aligned_cols=84 Identities=19% Similarity=0.370 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCC
Q 007499 298 AGVALAGLLGTVRAQGLSLTDFADQKIVVVGAG-SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLD 376 (601)
Q Consensus 298 aav~LAgll~Alr~~g~~l~dl~~~riv~~GAG-sAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~ 376 (601)
.-+|-.|++--|+..+.+++- .++|++|.+ --|.-+|.||.. .| ..+.++.|+
T Consensus 159 ~PcTp~gv~~lL~~~~i~l~G---k~vvViGRS~iVGkPla~LL~~-----~~-------ATVTi~Hs~----------- 212 (303)
T 4b4u_A 159 GSATPAGIMTILKENNIEIAG---KHAVVVGRSAILGKPMAMMLLQ-----AN-------ATVTICHSR----------- 212 (303)
T ss_dssp CCHHHHHHHHHHHHTTCCCTT---CEEEEECCCTTTHHHHHHHHHH-----TT-------CEEEEECTT-----------
T ss_pred cCccHHHHHHHHHHHCCCCCC---CEEEEEeccccccchHHHHHHh-----cC-------CEEEEecCC-----------
Confidence 346788999999999998888 999999975 457777777654 23 246655542
Q ss_pred hhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHH
Q 007499 377 PAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKA 427 (601)
Q Consensus 377 ~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~ 427 (601)
..+|.+.+++ +|+||...+.|+.++.++||.
T Consensus 213 ------------------T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk~ 243 (303)
T 4b4u_A 213 ------------------TQNLPELVKQ--ADIIVGAVGKAELIQKDWIKQ 243 (303)
T ss_dssp ------------------CSSHHHHHHT--CSEEEECSCSTTCBCGGGSCT
T ss_pred ------------------CCCHHHHhhc--CCeEEeccCCCCccccccccC
Confidence 2458888988 899999999999999998874
No 134
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=81.40 E-value=2.1 Score=45.71 Aligned_cols=71 Identities=18% Similarity=0.357 Sum_probs=47.0
Q ss_pred CceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHH
Q 007499 321 DQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 399 (601)
Q Consensus 321 ~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~ 399 (601)
..|++|+|+ |-+|.|-++.+... |.. ..++..+|.+= +. + . . .+
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~l-----Ga~----~~~V~v~D~~~--~~-~------------g-~---------~~- 258 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKV-----GIP----DANILKWDIKE--TS-R------------G-G---------PF- 258 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHT-----TCC----GGGEEEECHHH--HT-T------------C-S---------CC-
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhC-----CCC----cCceEEeeccc--cc-c------------C-C---------ch-
Confidence 368999999 99999998887754 421 11466666641 00 0 0 0 01
Q ss_pred HHhcccCCcEEEeecCC----CCCCCHHHHHHh
Q 007499 400 EVVRKVKPHVLLGLSGV----GGVFNEEVLKAM 428 (601)
Q Consensus 400 e~V~~vkptvLIG~S~~----~g~Ft~evv~~M 428 (601)
+.++. .|++||+--. |-++|+|+|+.|
T Consensus 259 ~~i~~--aDivIn~vlig~~aP~Lvt~e~v~~m 289 (394)
T 2qrj_A 259 DEIPQ--ADIFINCIYLSKPIAPFTNMEKLNNP 289 (394)
T ss_dssp THHHH--SSEEEECCCCCSSCCCSCCHHHHCCT
T ss_pred hhHhh--CCEEEECcCcCCCCCcccCHHHHhcC
Confidence 12443 6999987654 788999999999
No 135
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=81.20 E-value=2 Score=46.19 Aligned_cols=179 Identities=13% Similarity=0.109 Sum_probs=111.3
Q ss_pred ChhhhhHhHHHHHHHHHHhC-CCe-E-EeeCCCChHHH---HHHHHhc---c--CCccccC----------cchhHHHHH
Q 007499 244 EGEEYLSIVDEFMEAVHARW-PKA-I-FEDFQMKWAFE---TLERYRK---R--FCMFNDD----------IQGTAGVAL 302 (601)
Q Consensus 244 ~g~~Y~~~vdefv~av~~~~-P~~-l-~EDf~~~~Af~---iL~ryr~---~--~~~FnDD----------iQGTaav~L 302 (601)
+.+|-..|...|++++.+.- |+. + =+|++.. +.. +.+.|+. . ..++--+ -.-||-=+.
T Consensus 116 s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~-~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 194 (421)
T 1v9l_A 116 SQRELEELSRGYARAIAPLIGDVVDIPAPDVGTN-AQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVA 194 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCC-HHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-HHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHHH
Confidence 44566788999999998877 654 5 8999873 222 3355532 1 1222221 123555555
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEecCccccCCCCCCChhh-h
Q 007499 303 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPAA-A 380 (601)
Q Consensus 303 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~-lvD~~GLi~~~r~~l~~~k-~ 380 (601)
-++-.+++..|.+++. .||+|.|.|..|...|++|.+ .|. +++ +.|++|-|++.. .|+... +
T Consensus 195 ~~~~~~~~~~g~~l~g---k~vaVqG~GnVG~~aa~~L~e-----~Ga-------kVVavsD~~G~i~dp~-GlD~~~l~ 258 (421)
T 1v9l_A 195 VATREMAKKLWGGIEG---KTVAIQGMGNVGRWTAYWLEK-----MGA-------KVIAVSDINGVAYRKE-GLNVELIQ 258 (421)
T ss_dssp HHHHHHHHHHHSCCTT---CEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSSCEEECTT-CCCTHHHH
T ss_pred HHHHHHHHhcCCCcCC---CEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEECCCcEEECCC-CCCHHHHH
Confidence 5677788888988877 999999999999999987765 342 455 999999998754 232211 1
Q ss_pred ccccccCC--CCCcc-----cCC-CHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007499 381 PFAKDPGD--FMGLR-----EGA-SLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 446 (601)
Q Consensus 381 ~fa~~~~~--~~~~~-----~~~-~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN-Pt~ 446 (601)
.+...... |..-. ... +-.| +-.++.|+|+=+. .++..|++-++.+ .-.||.--+| |+.
T Consensus 259 ~~k~~~g~~~v~~y~~~~~~~~~~~~~~-~~~~~~Dil~P~A-~~~~I~~~~a~~l-----~ak~V~EgAN~p~t 326 (421)
T 1v9l_A 259 KNKGLTGPALVELFTTKDNAEFVKNPDA-IFKLDVDIFVPAA-IENVIRGDNAGLV-----KARLVVEGANGPTT 326 (421)
T ss_dssp HTTTSCHHHHHHHHHHTSCCCCCSSTTG-GGGCCCSEEEECS-CSSCBCTTTTTTC-----CCSEEECCSSSCBC
T ss_pred HHHHhhCCccccccccccCceEeCCchh-hhcCCccEEEecC-cCCccchhhHHHc-----CceEEEecCCCcCC
Confidence 11111000 00000 000 1122 3457889999777 4788998888776 3678888888 653
No 136
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=80.86 E-value=1.1 Score=46.05 Aligned_cols=114 Identities=17% Similarity=0.200 Sum_probs=65.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCC-CCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.||.|+|||+.|..+|-+|+. .++ ...|+|+|.+-=-.++ ..+|.+.. +|..+. . -..+..+
T Consensus 10 ~KI~IiGaG~vG~~la~~l~~-----~~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~-~-----i~~~~~~ 72 (326)
T 2zqz_A 10 QKVILVGDGAVGSSYAYAMVL-----QGI-----AQEIGIVDIFKDKTKGDAIDLSNAL-PFTSPK-K-----IYSAEYS 72 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HTC-----CSEEEEECSCHHHHHHHHHHHHTTG-GGSCCC-E-----EEECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHc-----CCC-----CCEEEEEeCCchHhHHHHHHHHHHH-HhcCCe-E-----EEECCHH
Confidence 689999999999998887643 243 2579999984100000 00122211 232211 0 0113466
Q ss_pred HhcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007499 401 VVRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 458 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~w 458 (601)
++++ .|++|=+.+.+.. .-+++++.|. +++..-+|+-.|||.. ...+-+++.
T Consensus 73 a~~~--aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~-~~~p~a~iiv~tNPv~---~~t~~~~k~ 138 (326)
T 2zqz_A 73 DAKD--ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIV-DSGFNGIFLVAANPVD---ILTYATWKL 138 (326)
T ss_dssp GGGG--CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHH-HHTCCSEEEECSSSHH---HHHHHHHHH
T ss_pred HhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HHCCCeEEEEeCCcHH---HHHHHHHHH
Confidence 7777 7988855444422 1234556664 3788999999999996 344555553
No 137
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=80.85 E-value=1.6 Score=46.72 Aligned_cols=126 Identities=17% Similarity=0.163 Sum_probs=76.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHH-hcCCChhhhcCeEEEEecCccccCCCCC-CChhhhccccccCCCCCcccCCCHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAAR-MAGNNDAFARNKFFLLDKDGLITKERKN-LDPAAAPFAKDPGDFMGLREGASLL 399 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~-~~Gls~eeA~~~i~lvD~~GLi~~~r~~-l~~~k~~fa~~~~~~~~~~~~~~L~ 399 (601)
.||.|+|||+. .+..++..+.. ..++. -..|+|+|.+- +|-. ..+....+++..... ....++.
T Consensus 3 ~KI~IIGaG~v---~~~~l~~~l~~~~~~l~----~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v---~~t~d~~ 68 (417)
T 1up7_A 3 MRIAVIGGGSS---YTPELVKGLLDISEDVR----IDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKV---LISDTFE 68 (417)
T ss_dssp CEEEEETTTCT---THHHHHHHHHHHTTTSC----CCEEEEECSCH----HHHHHHHHHHHHHHTTSSEE---EECSSHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHhcccCCC----cCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEE---EEeCCHH
Confidence 69999999994 66665554542 14542 25799999753 1100 001111111111111 1235788
Q ss_pred HHhcccCCcEEEeecCCCC---------------CC-------------------CHHHHHHhhhcCCCCCeEEecCCCC
Q 007499 400 EVVRKVKPHVLLGLSGVGG---------------VF-------------------NEEVLKAMRESDSVKPAIFAMSNPT 445 (601)
Q Consensus 400 e~V~~vkptvLIG~S~~~g---------------~F-------------------t~evv~~Ma~~~~erPIIFaLSNPt 445 (601)
+++++ .|++|=..++++ .+ =.++++.|. ++| .-+|+-.|||.
T Consensus 69 ~al~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~-~~~-~A~lin~TNPv 144 (417)
T 1up7_A 69 GAVVD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVR-KTS-NATIVNFTNPS 144 (417)
T ss_dssp HHHTT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHH-HTT-CCEEEECSSSH
T ss_pred HHhCC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHH-HHC-CEEEEEeCChH
Confidence 99998 899986665542 21 258889995 499 99999999998
Q ss_pred CccCCCHHHHhcccCCcEEEEcC
Q 007499 446 MNAECTAADAFKHAGENIVFASG 468 (601)
Q Consensus 446 ~~aE~tpeda~~wt~Grai~AsG 468 (601)
. +..+-+++.+.-.-+|.+|
T Consensus 145 d---i~t~a~~k~~p~~rviG~c 164 (417)
T 1up7_A 145 G---HITEFVRNYLEYEKFIGLC 164 (417)
T ss_dssp H---HHHHHHHHTTCCSSEEECC
T ss_pred H---HHHHHHHHhCCCCCEEEeC
Confidence 6 5556666777442455554
No 138
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=80.82 E-value=1.5 Score=42.95 Aligned_cols=47 Identities=28% Similarity=0.508 Sum_probs=35.9
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 303 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 303 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.|++.+++..+. +|.+ +++|+|+|.+|..+|..+.. .|. +++++|++
T Consensus 102 ~g~~~~l~~~~~---~l~~-~v~iiG~G~~g~~~a~~l~~-----~g~-------~v~v~~r~ 148 (263)
T 2d5c_A 102 PGFLEALKAGGI---PLKG-PALVLGAGGAGRAVAFALRE-----AGL-------EVWVWNRT 148 (263)
T ss_dssp HHHHHHHHHTTC---CCCS-CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred HHHHHHHHHhCC---CCCC-eEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 478888887765 4666 99999999999988887654 342 58888874
No 139
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=80.58 E-value=4.2 Score=41.14 Aligned_cols=98 Identities=16% Similarity=0.203 Sum_probs=57.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccC-CCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPG-DFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~-~~~~~~~~~~L~e 400 (601)
.+|.|+|+|..|..++..+... .|. ++++++|+. . +....|++... .. ....++.|
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----~------~~~~~l~~~~~~~~---~~~~~~~e 192 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----K------ENAEKFADTVQGEV---RVCSSVQE 192 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----H------HHHHHHHHHSSSCC---EECSSHHH
T ss_pred cEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----H------HHHHHHHHHhhCCe---EEeCCHHH
Confidence 8999999999999998887653 243 478888873 1 11122332210 00 12367999
Q ss_pred HhcccCCcEEEeecCC-CCCCCHHHHHHhhhcCCCCCeEEecCC--CCCccCCCH
Q 007499 401 VVRKVKPHVLLGLSGV-GGVFNEEVLKAMRESDSVKPAIFAMSN--PTMNAECTA 452 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~-~g~Ft~evv~~Ma~~~~erPIIFaLSN--Pt~~aE~tp 452 (601)
+++. +|++|=+... ..+|.+ .. ..+.-+|+.+|+ |.. .|+.+
T Consensus 193 ~v~~--aDiVi~atp~~~~v~~~---~~----l~~g~~vi~~g~~~p~~-~el~~ 237 (312)
T 2i99_A 193 AVAG--ADVIITVTLATEPILFG---EW----VKPGAHINAVGASRPDW-RELDD 237 (312)
T ss_dssp HHTT--CSEEEECCCCSSCCBCG---GG----SCTTCEEEECCCCSTTC-CSBCH
T ss_pred HHhc--CCEEEEEeCCCCcccCH---HH----cCCCcEEEeCCCCCCCc-eeccH
Confidence 9987 7988854321 223333 12 234568888853 533 45554
No 140
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=80.55 E-value=1.6 Score=43.01 Aligned_cols=32 Identities=19% Similarity=0.232 Sum_probs=26.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||.|+|+|..|..+|..+... | -+++++|++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----G-------FDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 4799999999999999998764 4 258888874
No 141
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=80.49 E-value=0.93 Score=46.25 Aligned_cols=113 Identities=19% Similarity=0.309 Sum_probs=63.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCC-CCCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
||.|+|||+.|.++|-.++. .|+ ..++|+|.+-=-.++ -.+|.+...++..+ ... ....+. ++
T Consensus 1 KI~IiGaG~vG~~~a~~l~~-----~~l------~el~L~Di~~~~~~g~~~dl~~~~~~~~~~-~~i---~~t~d~-~a 64 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMM-----RGY------DDLLLIARTPGKPQGEALDLAHAAAELGVD-IRI---SGSNSY-ED 64 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECSSTTHHHHHHHHHHHHHHHHTCC-CCE---EEESCG-GG
T ss_pred CEEEECcCHHHHHHHHHHHh-----CCC------CEEEEEcCChhhHHHHHHHHHHhhhhcCCC-eEE---EECCCH-HH
Confidence 68999999999999976654 254 269999985100000 00122111111111 111 111344 67
Q ss_pred hcccCCcEEEeecCCCC---C-----------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhc
Q 007499 402 VRKVKPHVLLGLSGVGG---V-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFK 457 (601)
Q Consensus 402 V~~vkptvLIG~S~~~g---~-----------Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~ 457 (601)
+++ .|++|=+.+.+. - .-+++++.|.+ +++.-+|+-.|||.. ...+-+++
T Consensus 65 ~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~tNPv~---~~t~~~~k 128 (308)
T 2d4a_B 65 MRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKA-YAKDAIVVITTNPVD---AMTYVMYK 128 (308)
T ss_dssp GTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHH---HHHHHHHH
T ss_pred hCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHH-HCCCeEEEEeCCchH---HHHHHHHH
Confidence 777 799885544443 1 13567777754 778887777899986 33444444
No 142
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=80.47 E-value=7.5 Score=40.16 Aligned_cols=143 Identities=15% Similarity=0.095 Sum_probs=88.8
Q ss_pred cCCcccc-Cc--chhHHHHHHHHHHHHHHh---------C-------CCCCCCCCceEEEeCcchHHHHHHHHHHHHHHH
Q 007499 286 RFCMFND-DI--QGTAGVALAGLLGTVRAQ---------G-------LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAAR 346 (601)
Q Consensus 286 ~~~~FnD-Di--QGTaav~LAgll~Alr~~---------g-------~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~ 346 (601)
.+++.|- +. ..+|=-+++-+|+..|.. | ..-.+|.+.+|.|+|.|..|-.+|+.+...
T Consensus 87 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~--- 163 (334)
T 2pi1_A 87 GILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAF--- 163 (334)
T ss_dssp TCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred CeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHHHHC---
Confidence 3666654 22 235556788888877621 1 012245559999999999999999988754
Q ss_pred hcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeec----CCCCCCCH
Q 007499 347 MAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNE 422 (601)
Q Consensus 347 ~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft~ 422 (601)
|+ +++.+|+.. .+.. .... ....+|.|+++. .|+++=.- ...+.|++
T Consensus 164 --G~-------~V~~~d~~~---------~~~~---~~~g------~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~ 214 (334)
T 2pi1_A 164 --GM-------KVLCYDVVK---------REDL---KEKG------CVYTSLDELLKE--SDVISLHVPYTKETHHMINE 214 (334)
T ss_dssp --TC-------EEEEECSSC---------CHHH---HHTT------CEECCHHHHHHH--CSEEEECCCCCTTTTTCBCH
T ss_pred --cC-------EEEEECCCc---------chhh---HhcC------ceecCHHHHHhh--CCEEEEeCCCChHHHHhhCH
Confidence 43 688888742 1111 0100 012459999987 79887431 23478999
Q ss_pred HHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEE
Q 007499 423 EVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA 466 (601)
Q Consensus 423 evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai~A 466 (601)
+.++.|. +..|+.=.|.-..--|-.-.+|++ +|+.-.|
T Consensus 215 ~~l~~mk----~gailIN~aRg~~vd~~aL~~aL~--~g~i~gA 252 (334)
T 2pi1_A 215 ERISLMK----DGVYLINTARGKVVDTDALYRAYQ--RGKFSGL 252 (334)
T ss_dssp HHHHHSC----TTEEEEECSCGGGBCHHHHHHHHH--TTCEEEE
T ss_pred HHHhhCC----CCcEEEECCCCcccCHHHHHHHHH--hCCceEE
Confidence 9999993 577888888755433433444443 5655433
No 143
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=80.30 E-value=1.2 Score=45.58 Aligned_cols=114 Identities=18% Similarity=0.231 Sum_probs=65.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCC-CCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.||.|+|||+.|..+|-+|+.. ++ ...|+|+|.+-=-.++ ..+|.+.. +|.++. . -..+..+
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~-~-----v~~~~~~ 68 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GI-----AEEFVIVDVVKDRTKGDALDLEDAQ-AFTAPK-K-----IYSGEYS 68 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHGGG-GGSCCC-E-----EEECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHHHHHHHHHHHHH-HhcCCe-E-----EEECCHH
Confidence 6899999999999988776542 43 2579999984100000 01222221 232211 0 0113456
Q ss_pred HhcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007499 401 VVRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 458 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~w 458 (601)
++++ .|++|=+.+.+.. .-+++++.|. +++..-+|+-.|||.. ...+-+++.
T Consensus 69 a~~~--aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~-~~~p~a~iiv~tNPv~---~~t~~~~k~ 134 (318)
T 1ez4_A 69 DCKD--ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVV-DSGFDGIFLVAANPVD---ILTYATWKF 134 (318)
T ss_dssp GGTT--CSEEEECCCC----------CHHHHHHHHHHHHHHHH-HTTCCSEEEECSSSHH---HHHHHHHHH
T ss_pred HhCC--CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HhCCCeEEEEeCCcHH---HHHHHHHHH
Confidence 6777 7888854443321 1244666664 4889999999999986 344555553
No 144
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=80.27 E-value=1.2 Score=45.31 Aligned_cols=103 Identities=16% Similarity=0.122 Sum_probs=58.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCC-CCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.||.|+|+|+.|..+|..|..+ | .++.++|+.--+..-+ ..+... .+........ .-..++.+
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~-----g-------~~V~~~~r~~~~~~~~~~g~~~~-~~~~~~~~~~---~~~~~~~~ 67 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA-----G-------EAINVLARGATLQALQTAGLRLT-EDGATHTLPV---RATHDAAA 67 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT-----T-------CCEEEECCHHHHHHHHHTCEEEE-ETTEEEEECC---EEESCHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----C-------CEEEEEEChHHHHHHHHCCCEEe-cCCCeEEEee---eEECCHHH
Confidence 7899999999999999888753 4 2588888731110000 001000 0000000000 01245666
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCC
Q 007499 401 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPT 445 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt 445 (601)
++. +|++| ++. +.-..+++++.++....+..+|..++|..
T Consensus 68 -~~~--~D~Vi-lav-k~~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 68 -LGE--QDVVI-VAV-KAPALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp -HCC--CSEEE-ECC-CHHHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred -cCC--CCEEE-EeC-CchhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 444 78877 443 23456888888864345677999999995
No 145
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=80.09 E-value=0.66 Score=52.08 Aligned_cols=37 Identities=24% Similarity=0.447 Sum_probs=31.4
Q ss_pred CCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 315 SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 315 ~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
+|++ .||+|+|||..|..+|..|+.+ |+ ++|.++|.+
T Consensus 324 kL~~---~kVLIVGaGGLGs~va~~La~a-----GV------G~ItLvD~D 360 (598)
T 3vh1_A 324 IIKN---TKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 360 (598)
T ss_dssp HHHT---CEEEEECCSHHHHHHHHHHHTT-----TC------CEEEEECCS
T ss_pred HHhC---CeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 4455 9999999999999999998875 43 689999987
No 146
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=80.09 E-value=2.4 Score=43.15 Aligned_cols=34 Identities=26% Similarity=0.411 Sum_probs=27.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||.|+|+|..|..+|..+.. .|.. .+|+++|++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~-----~G~~-----~~V~~~dr~ 67 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRR-----SGFK-----GKIYGYDIN 67 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHH-----TTCC-----SEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHh-----CCCC-----CEEEEEECC
Confidence 799999999999999988875 3542 378888874
No 147
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=79.93 E-value=8.2 Score=39.70 Aligned_cols=142 Identities=18% Similarity=0.174 Sum_probs=86.8
Q ss_pred cCCccccCcc---hhHHHHHHHHHHHHHH----------------hCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHH
Q 007499 286 RFCMFNDDIQ---GTAGVALAGLLGTVRA----------------QGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAAR 346 (601)
Q Consensus 286 ~~~~FnDDiQ---GTaav~LAgll~Alr~----------------~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~ 346 (601)
.+.+.|---. .+|=-+++.+|+..|. .+..-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 91 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~--- 167 (333)
T 1dxy_A 91 GIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGF--- 167 (333)
T ss_dssp TCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHHC---
Confidence 4666664322 3444578888887661 11112345559999999999999999988753
Q ss_pred hcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecC----CCCCCCH
Q 007499 347 MAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVFNE 422 (601)
Q Consensus 347 ~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~----~~g~Ft~ 422 (601)
|+ +++.+|+..- .... .++ ...+|.|+++. .|+++=+-- ..+.|++
T Consensus 168 --G~-------~V~~~d~~~~-----~~~~----~~~----------~~~~l~ell~~--aDvV~~~~P~~~~t~~li~~ 217 (333)
T 1dxy_A 168 --GA-------KVIAYDPYPM-----KGDH----PDF----------DYVSLEDLFKQ--SDVIDLHVPGIEQNTHIINE 217 (333)
T ss_dssp --TC-------EEEEECSSCC-----SSCC----TTC----------EECCHHHHHHH--CSEEEECCCCCGGGTTSBCH
T ss_pred --CC-------EEEEECCCcc-----hhhH----hcc----------ccCCHHHHHhc--CCEEEEcCCCchhHHHHhCH
Confidence 43 6888887521 1110 111 12368999987 788875421 2378999
Q ss_pred HHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEE
Q 007499 423 EVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA 466 (601)
Q Consensus 423 evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai~A 466 (601)
+.++.|. +..++.=.|.-..--|-.-.+|++ +|+.--|
T Consensus 218 ~~l~~mk----~ga~lIn~srg~~vd~~aL~~aL~--~g~i~gA 255 (333)
T 1dxy_A 218 AAFNLMK----PGAIVINTARPNLIDTQAMLSNLK--SGKLAGV 255 (333)
T ss_dssp HHHHHSC----TTEEEEECSCTTSBCHHHHHHHHH--TTSEEEE
T ss_pred HHHhhCC----CCcEEEECCCCcccCHHHHHHHHH--hCCccEE
Confidence 9999993 467888787754432333333333 5554433
No 148
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=79.41 E-value=1 Score=46.87 Aligned_cols=33 Identities=21% Similarity=0.421 Sum_probs=29.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||+|+|+|..|.-||..|+.+++ ++|.++|.+
T Consensus 37 ~~VlivG~GGlG~~ia~~La~~Gv-----------g~itlvD~d 69 (346)
T 1y8q_A 37 SRVLLVGLKGLGAEIAKNLILAGV-----------KGLTMLDHE 69 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-----------SEEEEECCC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCC-----------CEEEEEECC
Confidence 999999999999999999987644 689999976
No 149
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=79.23 E-value=2 Score=42.33 Aligned_cols=32 Identities=22% Similarity=0.302 Sum_probs=25.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||.|+|+|..|..+|..+.. .|. +++++|++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLK-----EGV-------TVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHH-----CCC-------eEEEEeCC
Confidence 689999999999999988764 242 58888874
No 150
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=79.19 E-value=8.2 Score=39.78 Aligned_cols=142 Identities=12% Similarity=0.217 Sum_probs=87.8
Q ss_pred ccCCccccCc---chhHHHHHHHHHHHHHHh----------C----C-CCCCCCCceEEEeCcchHHHHHHHHHHHHHHH
Q 007499 285 KRFCMFNDDI---QGTAGVALAGLLGTVRAQ----------G----L-SLTDFADQKIVVVGAGSAGLGVLKMAVQAAAR 346 (601)
Q Consensus 285 ~~~~~FnDDi---QGTaav~LAgll~Alr~~----------g----~-~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~ 346 (601)
..+++.|--- +.+|=-+++.+|+..|-. | . .-.+|.+.+|.|+|.|..|-.+|+.+...
T Consensus 83 ~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~~--- 159 (324)
T 3evt_A 83 AGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASAL--- 159 (324)
T ss_dssp TTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHhC---
Confidence 3477777643 334445678888776521 0 0 12345559999999999999999988653
Q ss_pred hcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeec----CCCCCCCH
Q 007499 347 MAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNE 422 (601)
Q Consensus 347 ~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft~ 422 (601)
|+ +++.+|+..-- .+.+.. .+ ...+|.|+++. .|+++=+- ...+.|++
T Consensus 160 --G~-------~V~~~dr~~~~---~~~~~~---~~-----------~~~~l~ell~~--aDvV~l~lPlt~~t~~li~~ 211 (324)
T 3evt_A 160 --GM-------HVIGVNTTGHP---ADHFHE---TV-----------AFTATADALAT--ANFIVNALPLTPTTHHLFST 211 (324)
T ss_dssp --TC-------EEEEEESSCCC---CTTCSE---EE-----------EGGGCHHHHHH--CSEEEECCCCCGGGTTCBSH
T ss_pred --CC-------EEEEECCCcch---hHhHhh---cc-----------ccCCHHHHHhh--CCEEEEcCCCchHHHHhcCH
Confidence 43 68888875310 011110 01 12468888887 78887431 22588999
Q ss_pred HHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcE
Q 007499 423 EVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENI 463 (601)
Q Consensus 423 evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Gra 463 (601)
+.+..|. +..++.=.|.-..--|-.-.+|++ +|+.
T Consensus 212 ~~l~~mk----~gailIN~aRG~~vd~~aL~~aL~--~g~i 246 (324)
T 3evt_A 212 ELFQQTK----QQPMLINIGRGPAVDTTALMTALD--HHQL 246 (324)
T ss_dssp HHHHTCC----SCCEEEECSCGGGBCHHHHHHHHH--TTSC
T ss_pred HHHhcCC----CCCEEEEcCCChhhhHHHHHHHHH--hCCc
Confidence 9999993 577888888744433333334443 4553
No 151
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=79.13 E-value=1.4 Score=44.75 Aligned_cols=105 Identities=18% Similarity=0.283 Sum_probs=59.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCC-CCCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
||.|+|||+.|.++|..|... |.. ..++++|++---... ..++.+. .++... ... ...+ .++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~~-----~~V~l~D~~~~~~~~~~~~l~~~-~~~~~~-~~i----~~~d-~~~ 64 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GFA-----REMVLIDVDKKRAEGDALDLIHG-TPFTRR-ANI----YAGD-YAD 64 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSSHHHHHHHHHHHHHH-GGGSCC-CEE----EECC-GGG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEeCChHHHHHHHHHHHhh-hhhcCC-cEE----EeCC-HHH
Confidence 799999999999998887653 431 479999985210000 0001110 011111 000 0123 345
Q ss_pred hcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 007499 402 VRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTMN 447 (601)
Q Consensus 402 V~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~~erPIIFaLSNPt~~ 447 (601)
++. .|++|=+-..+.. .-+++++.|.+ +++.-+|+-.|||...
T Consensus 65 ~~~--aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~~~~~ii~~tNp~~~ 121 (319)
T 1a5z_A 65 LKG--SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSK-YAPDSIVIVVTNPVDV 121 (319)
T ss_dssp GTT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECSSSHHH
T ss_pred hCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh-hCCCeEEEEeCCcHHH
Confidence 665 7887744333331 12688888854 6777788889999874
No 152
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=79.06 E-value=8.2 Score=39.64 Aligned_cols=144 Identities=17% Similarity=0.118 Sum_probs=88.4
Q ss_pred ccCCccccCcc---hhHHHHHHHHHHHHHH---------hC------CCCCCCCCceEEEeCcchHHHHHHHHHHHHHHH
Q 007499 285 KRFCMFNDDIQ---GTAGVALAGLLGTVRA---------QG------LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAAR 346 (601)
Q Consensus 285 ~~~~~FnDDiQ---GTaav~LAgll~Alr~---------~g------~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~ 346 (601)
..+.+.|---- .+|=-+++.+|+..|. .| ..-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 92 ~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~--- 168 (333)
T 1j4a_A 92 LGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEGF--- 168 (333)
T ss_dssp TTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHHC---
Confidence 34666665332 3444578888888772 12 111355669999999999999999988653
Q ss_pred hcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecC----CCCCCCH
Q 007499 347 MAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVFNE 422 (601)
Q Consensus 347 ~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~----~~g~Ft~ 422 (601)
|+ +++.+|+.. ......++.. ..+|.|+++. .|+++=+-. ..+.+++
T Consensus 169 --G~-------~V~~~d~~~---------~~~~~~~~~~---------~~~l~ell~~--aDvV~l~~p~~~~t~~li~~ 219 (333)
T 1j4a_A 169 --GA-------KVITYDIFR---------NPELEKKGYY---------VDSLDDLYKQ--ADVISLHVPDVPANVHMIND 219 (333)
T ss_dssp --TC-------EEEEECSSC---------CHHHHHTTCB---------CSCHHHHHHH--CSEEEECSCCCGGGTTCBSH
T ss_pred --CC-------EEEEECCCc---------chhHHhhCee---------cCCHHHHHhh--CCEEEEcCCCcHHHHHHHhH
Confidence 43 688888742 1100112111 1368999887 788875421 2478999
Q ss_pred HHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEE
Q 007499 423 EVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA 466 (601)
Q Consensus 423 evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai~A 466 (601)
+.++.|. +..++.-.|.-..--|-.-.+|++ +|+.--|
T Consensus 220 ~~l~~mk----~ga~lIn~arg~~vd~~aL~~aL~--~g~i~gA 257 (333)
T 1j4a_A 220 ESIAKMK----QDVVIVNVSRGPLVDTDAVIRGLD--SGKIFGY 257 (333)
T ss_dssp HHHHHSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEE
T ss_pred HHHhhCC----CCcEEEECCCCcccCHHHHHHHHH--hCCceEE
Confidence 9999993 567888888754433333334443 4554433
No 153
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=78.81 E-value=1.5 Score=44.91 Aligned_cols=104 Identities=15% Similarity=0.164 Sum_probs=62.9
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccC--CCCCcccCCCH
Q 007499 322 QKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPG--DFMGLREGASL 398 (601)
Q Consensus 322 ~riv~~G-AGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~--~~~~~~~~~~L 398 (601)
.||+|+| +|..|..++..|.. .|+ ...|+++|.+.- . .....+.+... .+.......++
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~-----~~ev~l~Di~~~----~----~~~~dL~~~~~~~~v~~~~~t~d~ 70 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPL-----VSVLHLYDVVNA----P----GVTADISHMDTGAVVRGFLGQQQL 70 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTT-----EEEEEEEESSSH----H----HHHHHHHTSCSSCEEEEEESHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEeCCCc----H----hHHHHhhcccccceEEEEeCCCCH
Confidence 6899999 79999988877643 343 136999996421 0 00001111000 00000012358
Q ss_pred HHHhcccCCcEEEeecCCC---C-----------CCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 399 LEVVRKVKPHVLLGLSGVG---G-----------VFNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 399 ~e~V~~vkptvLIG~S~~~---g-----------~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
.+++++ .|++|=+.+.+ | ..++++++.|.+ ++.+.+|+--|||..
T Consensus 71 ~~al~g--aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~-~~p~~~viv~SNPv~ 129 (326)
T 1smk_A 71 EAALTG--MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAK-CCPRAIVNLISNPVN 129 (326)
T ss_dssp HHHHTT--CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHH-HCTTSEEEECCSSHH
T ss_pred HHHcCC--CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-hCCCeEEEEECCchH
Confidence 889988 79888555443 2 235677788754 778889999999986
No 154
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=78.67 E-value=1.6 Score=41.62 Aligned_cols=93 Identities=14% Similarity=0.134 Sum_probs=55.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEE-EecCccccCCCCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFL-LDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~l-vD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.||.|+|+|..|..+|..+... |. ++.+ +|++ . +.+......+-- ....+..|
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-----g~-------~V~~v~~r~----~--~~~~~l~~~~g~--------~~~~~~~~ 77 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-----QI-------PAIIANSRG----P--ASLSSVTDRFGA--------SVKAVELK 77 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-----TC-------CEEEECTTC----G--GGGHHHHHHHTT--------TEEECCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCC----H--HHHHHHHHHhCC--------CcccChHH
Confidence 6899999999999999887653 43 3554 5553 1 112221111110 01123456
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 401 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
+++. +|++| ++. +....+++++.++. .+..+|+-+|||.+
T Consensus 78 ~~~~--aDvVi-lav-p~~~~~~v~~~l~~--~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 78 DALQ--ADVVI-LAV-PYDSIADIVTQVSD--WGGQIVVDASNAID 117 (220)
T ss_dssp HHTT--SSEEE-EES-CGGGHHHHHTTCSC--CTTCEEEECCCCBC
T ss_pred HHhc--CCEEE-EeC-ChHHHHHHHHHhhc--cCCCEEEEcCCCCC
Confidence 6665 78877 333 44456778887743 34569999999984
No 155
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=78.65 E-value=1.8 Score=43.72 Aligned_cols=32 Identities=28% Similarity=0.515 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||.|+|+|..|.++|..+... |. +++++|++
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 63 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNRT 63 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 7999999999999999988753 42 58888874
No 156
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=78.65 E-value=1.3 Score=45.08 Aligned_cols=115 Identities=21% Similarity=0.300 Sum_probs=67.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCC-CCCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
||.|+|||+.|.++|..|... |+- ..+.++|.+-=..++ ..+|.+....|-.+. .. ....+ .++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~~-----~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~-~i---~~t~d-~~a 66 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LDV-----DEIALVDIAEDLAVGEAMDLAHAAAGIDKYP-KI---VGGAD-YSL 66 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SCC-----SEEEEECSSHHHHHHHHHHHHHHHHTTTCCC-EE---EEESC-GGG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEECChHHHHHHHHHHHhhhhhcCCCC-EE---EEeCC-HHH
Confidence 799999999999999887653 431 479999985311110 002222222221111 11 11235 778
Q ss_pred hcccCCcEEEeecCC---CCC-----C--C----HHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007499 402 VRKVKPHVLLGLSGV---GGV-----F--N----EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 458 (601)
Q Consensus 402 V~~vkptvLIG~S~~---~g~-----F--t----~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~w 458 (601)
+++ .|++|=+.+. +|- | | +++++.|. +++..-+|+-.|||.. ....-+++.
T Consensus 67 ~~~--aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~-~~~p~a~iivvsNPvd---~~t~~~~k~ 131 (294)
T 1oju_A 67 LKG--SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIV-ENAPESKILVVTNPMD---VMTYIMWKE 131 (294)
T ss_dssp GTT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHH-TTSTTCEEEECSSSHH---HHHHHHHHH
T ss_pred hCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHH-hhCCCeEEEEeCCcch---HHHHHHHHh
Confidence 887 7887744433 332 1 2 45666775 4899999999999985 445555543
No 157
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=78.34 E-value=4.9 Score=42.70 Aligned_cols=144 Identities=18% Similarity=0.166 Sum_probs=83.8
Q ss_pred cCCccccCc---chhHHHHHHHHHHHHHHh---------C--------CCCCCCCCceEEEeCcchHHHHHHHHHHHHHH
Q 007499 286 RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------G--------LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAA 345 (601)
Q Consensus 286 ~~~~FnDDi---QGTaav~LAgll~Alr~~---------g--------~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~ 345 (601)
.+.+.|--- +.+|=-+++-+|+..|.. | ....+|.+.+|.|+|.|..|..+|+.+...
T Consensus 136 gI~V~n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~a~-- 213 (393)
T 2nac_A 136 NVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPF-- 213 (393)
T ss_dssp TCEEEECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHHGGG--
T ss_pred CEEEEeCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCccccccCCccCCCCEEEEEeECHHHHHHHHHHHhC--
Confidence 355555221 234555677777777621 1 011245559999999999999999987643
Q ss_pred HhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeec----CCCCCCC
Q 007499 346 RMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFN 421 (601)
Q Consensus 346 ~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft 421 (601)
|+ +++.+|+... .. ..+.... .....+|.|+++. .|+++=.- ...+.|+
T Consensus 214 ---G~-------~V~~~d~~~~--------~~---~~~~~~G----~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~ 266 (393)
T 2nac_A 214 ---DV-------HLHYTDRHRL--------PE---SVEKELN----LTWHATREDMYPV--CDVVTLNCPLHPETEHMIN 266 (393)
T ss_dssp ---TC-------EEEEECSSCC--------CH---HHHHHHT----CEECSSHHHHGGG--CSEEEECSCCCTTTTTCBS
T ss_pred ---CC-------EEEEEcCCcc--------ch---hhHhhcC----ceecCCHHHHHhc--CCEEEEecCCchHHHHHhh
Confidence 43 6888886421 11 1111100 0012469999987 79887431 2247899
Q ss_pred HHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEE
Q 007499 422 EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIV 464 (601)
Q Consensus 422 ~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai 464 (601)
++.++.|. +..+|.=.|.-..--|-.-.+|++ +|+.-
T Consensus 267 ~~~l~~mk----~gailIN~aRG~~vde~aL~~aL~--~g~i~ 303 (393)
T 2nac_A 267 DETLKLFK----RGAYIVNTARGKLCDRDAVARALE--SGRLA 303 (393)
T ss_dssp HHHHTTSC----TTEEEEECSCGGGBCHHHHHHHHH--TTSEE
T ss_pred HHHHhhCC----CCCEEEECCCchHhhHHHHHHHHH--cCCee
Confidence 99999993 467888788643322222333433 56543
No 158
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=78.32 E-value=0.67 Score=47.32 Aligned_cols=114 Identities=17% Similarity=0.281 Sum_probs=64.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCC-CCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.||.|+|||..|.++|..+.. .|+- ..|+++|.+--..+.. .++.+. .++...... -..+..+
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~-----~~~~-----~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~~~~-----i~~~~~~ 70 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMN-----QGIA-----DEIVLIDANESKAIGDAMDFNHG-KVFAPKPVD-----IWHGDYD 70 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HTCC-----SEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCE-----EEECCGG
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCCC-----CEEEEEeCCcchHHHHHhhHHHH-hhhcCCCeE-----EEcCcHH
Confidence 689999999999999876643 2432 4799999862111100 012211 111110000 0112346
Q ss_pred HhcccCCcEEEeecCCC---C-----------CCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhc
Q 007499 401 VVRKVKPHVLLGLSGVG---G-----------VFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFK 457 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~---g-----------~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~ 457 (601)
++++ .|++|=+.+.+ | ...+++++.|.+ +++.-++|-.|||.. ...+-+++
T Consensus 71 al~~--aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~~iv~tNPv~---~~~~~~~~ 135 (316)
T 1ldn_A 71 DCRD--ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMA-SGFQGLFLVATNPVD---ILTYATWK 135 (316)
T ss_dssp GTTT--CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHH-HTCCSEEEECSSSHH---HHHHHHHH
T ss_pred HhCC--CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHH-HCCCCEEEEeCCchH---HHHHHHHH
Confidence 6776 78887444333 2 123567777754 777778888899985 34444444
No 159
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=77.74 E-value=2.1 Score=42.05 Aligned_cols=97 Identities=11% Similarity=0.011 Sum_probs=55.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
.||.|+|+|..|..+|..|... |.. .+++++|++.- .+.. +.+.... .....++.|+
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~-----g~~-----~~V~~~d~~~~------~~~~----~~~~g~~---~~~~~~~~~~ 63 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRD-----HPH-----YKIVGYNRSDR------SRDI----ALERGIV---DEATADFKVF 63 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CTT-----SEEEEECSSHH------HHHH----HHHTTSC---SEEESCTTTT
T ss_pred ceEEEEeeCHHHHHHHHHHHhC-----CCC-----cEEEEEcCCHH------HHHH----HHHcCCc---ccccCCHHHh
Confidence 6899999999999999988653 211 36888887411 0111 1110000 0012345566
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhc-CCCCCeEEecCCCC
Q 007499 402 VRKVKPHVLLGLSGVGGVFNEEVLKAMRES-DSVKPAIFAMSNPT 445 (601)
Q Consensus 402 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~-~~erPIIFaLSNPt 445 (601)
++. +|++| ++..+... +++++.+... ..+..||.-+||-.
T Consensus 64 ~~~--aDvVi-lavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~~ 104 (290)
T 3b1f_A 64 AAL--ADVII-LAVPIKKT-IDFIKILADLDLKEDVIITDAGSTK 104 (290)
T ss_dssp GGG--CSEEE-ECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSCH
T ss_pred hcC--CCEEE-EcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCCc
Confidence 665 78776 44333443 7888887542 34566777677643
No 160
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=77.54 E-value=1.4 Score=44.68 Aligned_cols=106 Identities=19% Similarity=0.185 Sum_probs=59.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCC-CCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.||.|+|||..|.++|..+.. .|+ + .++++|.+-=-.+. ..+|.+...+...+ ... ....++ +
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~----~--~v~L~Di~~~~~~g~~~dl~~~~~~~~~~-~~i---~~t~d~-~ 66 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KEL----G--DIVLLDIVEGVPQGKALDLYEASPIEGFD-VRV---TGTNNY-A 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC----S--EEEEECSSSSHHHHHHHHHHTTHHHHTCC-CCE---EEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC----C--eEEEEeCCccHHHHHHHhHHHhHhhcCCC-eEE---EECCCH-H
Confidence 589999999999999987754 343 1 39999975100000 00111111001011 000 112456 6
Q ss_pred HhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 401 VVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
++++ .|++|=+.+.| |- .-+++.+.+. ++++.-+|+-.|||..
T Consensus 67 a~~~--aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~-~~~p~a~vi~~tNPv~ 123 (309)
T 1ur5_A 67 DTAN--SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAA-PLSPNAVIIMVNNPLD 123 (309)
T ss_dssp GGTT--CSEEEECCCC--------CHHHHHHHHHHHHHHHHHG-GGCTTCEEEECCSSHH
T ss_pred HHCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-hhCCCeEEEEcCCchH
Confidence 7777 79887554433 31 1246777775 4778888877899986
No 161
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=77.52 E-value=0.91 Score=46.05 Aligned_cols=106 Identities=21% Similarity=0.255 Sum_probs=58.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCC-CCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
||.|+|||+.|.++|..+... ++ -..++++|.+-=..+.. .++.+....+... ... ....++.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~-~~i---~~t~d~~~- 66 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVVEGIPQGKALDMYESGPVGLFD-TKV---TGSNDYAD- 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSSSHHHHHHHHHHTTHHHHTCC-CEE---EEESCGGG-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHHHHHhHHhhhhcccCC-cEE---EECCCHHH-
Confidence 799999999999999887642 21 14799999862100000 0011100001001 000 11234544
Q ss_pred hcccCCcEEEeecCCC---CC-------C----CHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 402 VRKVKPHVLLGLSGVG---GV-------F----NEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 402 V~~vkptvLIG~S~~~---g~-------F----t~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
++. .|++|=+.+.| |- . -+++++.|.+ +++.-+|+-+|||..
T Consensus 67 l~~--aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~~~~~viv~tNP~~ 122 (310)
T 1guz_A 67 TAN--SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMK-HSKNPIIIVVSNPLD 122 (310)
T ss_dssp GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCSSCEEEECCSSHH
T ss_pred HCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCcEEEEEcCchH
Confidence 666 78877443322 32 1 1466677754 678888888999985
No 162
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=77.42 E-value=5.7 Score=40.76 Aligned_cols=185 Identities=14% Similarity=0.129 Sum_probs=104.8
Q ss_pred chhHHHHHHHHHHHHHHh---------C----CCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEE
Q 007499 295 QGTAGVALAGLLGTVRAQ---------G----LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFL 361 (601)
Q Consensus 295 QGTaav~LAgll~Alr~~---------g----~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~l 361 (601)
+.+|=-+++.+|+..|.. | .+..+|.+.+|.|+|.|..|..+|+.+... |+ +++.
T Consensus 100 ~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~~-----G~-------~V~~ 167 (315)
T 3pp8_A 100 LQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQAW-----GF-------PLRC 167 (315)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHTT-----TC-------CEEE
T ss_pred HHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEE
Confidence 455666788888887731 1 123345559999999999999999988653 43 5888
Q ss_pred EecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCe
Q 007499 362 LDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPA 437 (601)
Q Consensus 362 vD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft~evv~~Ma~~~~erPI 437 (601)
+|+..- ...... .+. ...+|.|+++. .|+++=.- ...+.|+++.++.|. +..|
T Consensus 168 ~dr~~~------~~~~~~-~~~----------~~~~l~ell~~--aDiV~l~~Plt~~t~~li~~~~l~~mk----~gai 224 (315)
T 3pp8_A 168 WSRSRK------SWPGVE-SYV----------GREELRAFLNQ--TRVLINLLPNTAQTVGIINSELLDQLP----DGAY 224 (315)
T ss_dssp EESSCC------CCTTCE-EEE----------SHHHHHHHHHT--CSEEEECCCCCGGGTTCBSHHHHTTSC----TTEE
T ss_pred EcCCch------hhhhhh-hhc----------ccCCHHHHHhh--CCEEEEecCCchhhhhhccHHHHhhCC----CCCE
Confidence 887421 111100 010 11468999987 79887431 124789999999993 5778
Q ss_pred EEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCceecCCCeeeecccccccccchhhHHHHHHcCCcccCHHHHHHHH
Q 007499 438 IFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAA 517 (601)
Q Consensus 438 IFaLSNPt~~aE~tpeda~~wt~Grai~AsGSPf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~itd~m~~aAA 517 (601)
+.=.|+-..--|---.+|++ +|+.-.|.=-=|++-..+.. ..--+..|+.+-|=++ ..+. .+.|...++
T Consensus 225 lIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~~~--~pL~~~~nvilTPHia------~~t~-~~~~~~~~~ 293 (315)
T 3pp8_A 225 VLNLARGVHVQEADLLAALD--SGKLKGAMLDVFSQEPLPQE--SPLWRHPRVAMTPHIA------AVTR-PAEAIDYIS 293 (315)
T ss_dssp EEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSSCCTT--CGGGGCTTEEECSSCS------SCCC-HHHHHHHHH
T ss_pred EEECCCChhhhHHHHHHHHH--hCCccEEEcCCCCCCCCCCC--ChhhcCCCEEECCCCC------cccH-HHHHHHHHH
Confidence 88787754433333334443 56544332111111111101 0112345777777664 2222 245666666
Q ss_pred HHHhccCC
Q 007499 518 ECLASYMT 525 (601)
Q Consensus 518 ~aLA~~v~ 525 (601)
+-|.....
T Consensus 294 ~ni~~~~~ 301 (315)
T 3pp8_A 294 RTITQLEK 301 (315)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 66655543
No 163
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=77.32 E-value=4.6 Score=41.49 Aligned_cols=123 Identities=20% Similarity=0.222 Sum_probs=75.6
Q ss_pred cCCccccCc---chhHHHHHHHHHHHHHHh-----------------CC-C----CCCCCCceEEEeCcchHHHHHHHHH
Q 007499 286 RFCMFNDDI---QGTAGVALAGLLGTVRAQ-----------------GL-S----LTDFADQKIVVVGAGSAGLGVLKMA 340 (601)
Q Consensus 286 ~~~~FnDDi---QGTaav~LAgll~Alr~~-----------------g~-~----l~dl~~~riv~~GAGsAg~GiA~ll 340 (601)
.+++.|--- +.+|=-+++.+|+..|.. +. + -.+|.+.+|.|+|.|..|..+|..+
T Consensus 90 gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l 169 (334)
T 2dbq_A 90 GIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRA 169 (334)
T ss_dssp TCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSHHHHHHHHHH
T ss_pred CCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccCHHHHHHHHHH
Confidence 356665432 233444788888877631 10 0 1345569999999999999999988
Q ss_pred HHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEee-cCC---
Q 007499 341 VQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGL-SGV--- 416 (601)
Q Consensus 341 ~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~-S~~--- 416 (601)
... |+ +++.+|+..- . +....+ .. ...+|.|+++. .|+++=+ ...
T Consensus 170 ~~~-----G~-------~V~~~d~~~~------~--~~~~~~---g~------~~~~l~~~l~~--aDvVil~vp~~~~t 218 (334)
T 2dbq_A 170 KGF-----NM-------RILYYSRTRK------E--EVEREL---NA------EFKPLEDLLRE--SDFVVLAVPLTRET 218 (334)
T ss_dssp HHT-----TC-------EEEEECSSCC------H--HHHHHH---CC------EECCHHHHHHH--CSEEEECCCCCTTT
T ss_pred HhC-----CC-------EEEEECCCcc------h--hhHhhc---Cc------ccCCHHHHHhh--CCEEEECCCCChHH
Confidence 653 42 6888887421 0 100011 00 12468898887 7887643 222
Q ss_pred CCCCCHHHHHHhhhcCCCCCeEEecCC
Q 007499 417 GGVFNEEVLKAMRESDSVKPAIFAMSN 443 (601)
Q Consensus 417 ~g~Ft~evv~~Ma~~~~erPIIFaLSN 443 (601)
.+.++++.++.|. +..+|.-.|.
T Consensus 219 ~~~i~~~~~~~mk----~~ailIn~sr 241 (334)
T 2dbq_A 219 YHLINEERLKLMK----KTAILINIAR 241 (334)
T ss_dssp TTCBCHHHHHHSC----TTCEEEECSC
T ss_pred HHhhCHHHHhcCC----CCcEEEECCC
Confidence 2678888888883 4667776774
No 164
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=77.26 E-value=1.9 Score=42.46 Aligned_cols=32 Identities=25% Similarity=0.411 Sum_probs=25.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||.|+|+|..|..+|..|.. .|. +++++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLK-----AGY-------SLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-----TTC-------EEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 389999999999999988764 242 58888874
No 165
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=76.96 E-value=2.8 Score=41.82 Aligned_cols=32 Identities=16% Similarity=0.158 Sum_probs=25.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||.|+|+|..|.++|..|... |. +++++|++
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 47 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW-----PG-------GVTVYDIR 47 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS-----TT-------CEEEECSS
T ss_pred CeEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 5899999999999999888653 43 57888874
No 166
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=76.88 E-value=2 Score=42.33 Aligned_cols=93 Identities=10% Similarity=0.099 Sum_probs=56.6
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.||.|+|+ |..|..+|..|.. .|. +++++|++-- .+. .+....- ...++.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-----~g~-------~V~~~~r~~~------~~~----~~~~~g~------~~~~~~~ 63 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-----SAH-------HLAAIEIAPE------GRD----RLQGMGI------PLTDGDG 63 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----SSS-------EEEEECCSHH------HHH----HHHHTTC------CCCCSSG
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCC-------EEEEEECCHH------HHH----HHHhcCC------CcCCHHH
Confidence 48999999 9999999988864 342 6888886410 011 1111100 0124556
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 401 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
+++. +|++| ++..+.. .+++++.+.....+..||.-+|+..+
T Consensus 64 ~~~~--aDvVi-~av~~~~-~~~v~~~l~~~l~~~~ivv~~s~~~~ 105 (286)
T 3c24_A 64 WIDE--ADVVV-LALPDNI-IEKVAEDIVPRVRPGTIVLILDAAAP 105 (286)
T ss_dssp GGGT--CSEEE-ECSCHHH-HHHHHHHHGGGSCTTCEEEESCSHHH
T ss_pred HhcC--CCEEE-EcCCchH-HHHHHHHHHHhCCCCCEEEECCCCch
Confidence 6765 78877 3333333 58888887543345667777888654
No 167
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=76.75 E-value=1.1 Score=48.56 Aligned_cols=103 Identities=14% Similarity=0.143 Sum_probs=63.8
Q ss_pred hHHHHHHHHHHhCCCeEEeeCCCChHHHHHHHHhcc-CCcc--ccCcchhHHHHHHHHHHHHHHhCC-----CCCCCCCc
Q 007499 251 IVDEFMEAVHARWPKAIFEDFQMKWAFETLERYRKR-FCMF--NDDIQGTAGVALAGLLGTVRAQGL-----SLTDFADQ 322 (601)
Q Consensus 251 ~vdefv~av~~~~P~~l~EDf~~~~Af~iL~ryr~~-~~~F--nDDiQGTaav~LAgll~Alr~~g~-----~l~dl~~~ 322 (601)
.+..+++.+...+|+.-++-+....-.++-++|.-. +|++ |+..-+.|.....-++..+..... ++.+-...
T Consensus 134 ~~~~~l~~~a~~~~~v~~~~vd~~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 213 (521)
T 1hyu_A 134 DVVQALNLMAVLNPRIKHTAIDGGTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKRDAY 213 (521)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTSCCE
T ss_pred HHHHHHHHHHhHcCceEEEEEechhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhcccccccccccccCcc
Confidence 455566666667785445444344556678888643 6643 666667777776777766532210 01111126
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
+|+|+|||.||+..|..+.. .|+ ++.++|++
T Consensus 214 dVvIIGgG~AGl~aA~~la~-----~G~-------~v~lie~~ 244 (521)
T 1hyu_A 214 DVLIVGSGPAGAAAAVYSAR-----KGI-------RTGLMGER 244 (521)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 89999999999999888754 353 57777753
No 168
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=76.63 E-value=2.9 Score=44.81 Aligned_cols=110 Identities=22% Similarity=0.277 Sum_probs=73.7
Q ss_pred ChhhhhHhHHHHHHHHHHhC-CCe-E-EeeCCCChHHH---HHHHHhc---cC-C---ccccC----------cchhHHH
Q 007499 244 EGEEYLSIVDEFMEAVHARW-PKA-I-FEDFQMKWAFE---TLERYRK---RF-C---MFNDD----------IQGTAGV 300 (601)
Q Consensus 244 ~g~~Y~~~vdefv~av~~~~-P~~-l-~EDf~~~~Af~---iL~ryr~---~~-~---~FnDD----------iQGTaav 300 (601)
+.+|-..|...|++++.+.- |.. + =+|++.. ... +.+.|.. .. + ++--+ -.-||-=
T Consensus 115 s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~G 193 (419)
T 1gtm_A 115 SDREKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARG 193 (419)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhhH
Confidence 44566788899999998876 644 5 8899874 222 3355532 21 2 33222 1236655
Q ss_pred HHHHHHHHHHHhCCC-CCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEE-ecCccc
Q 007499 301 ALAGLLGTVRAQGLS-LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLL-DKDGLI 368 (601)
Q Consensus 301 ~LAgll~Alr~~g~~-l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lv-D~~GLi 368 (601)
+.-++..+++..|.. |+. .+|.|+|.|..|..+|+++.. +.|+ +++.+ |+.|-+
T Consensus 194 v~~~~~~~~~~~G~~~l~g---ktvgI~G~G~VG~~vA~~l~~----~~G~-------kVv~~sD~~g~~ 249 (419)
T 1gtm_A 194 ASYTIREAAKVLGWDTLKG---KTIAIQGYGNAGYYLAKIMSE----DFGM-------KVVAVSDSKGGI 249 (419)
T ss_dssp HHHHHHHHHHHTTCSCSTT---CEEEEECCSHHHHHHHHHHHH----TTCC-------EEEEEECSSCEE
T ss_pred HHHHHHHHHHHhCCcccCC---CEEEEEcCCHHHHHHHHHHHH----hcCC-------EEEEEeCCCccc
Confidence 666777888888987 777 999999999999999998765 0243 45544 887644
No 169
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=76.43 E-value=13 Score=37.77 Aligned_cols=120 Identities=19% Similarity=0.235 Sum_probs=78.7
Q ss_pred ccCCcccc-Ccch--hHHHHHHHHHHHHHHh---------C----C-CCCCCCCceEEEeCcchHHHHHHHHHHHHHHHh
Q 007499 285 KRFCMFND-DIQG--TAGVALAGLLGTVRAQ---------G----L-SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARM 347 (601)
Q Consensus 285 ~~~~~FnD-DiQG--Taav~LAgll~Alr~~---------g----~-~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~ 347 (601)
..+++.|- +... +|=-+++.+|+..|.. | . +..+|.+.+|.|+|.|..|..+|+.+...
T Consensus 71 ~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~---- 146 (303)
T 1qp8_A 71 PHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAAL---- 146 (303)
T ss_dssp TTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHHT----
T ss_pred cCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHHHC----
Confidence 34666653 3333 3345788888877632 1 1 22356669999999999999999988653
Q ss_pred cCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeec----CCCCCCCHH
Q 007499 348 AGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNEE 423 (601)
Q Consensus 348 ~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft~e 423 (601)
|+ +++.+|+..- +. .. . ...+|.|+++. .|+++=+- ...+.|+++
T Consensus 147 -G~-------~V~~~dr~~~-----~~------~~-~---------~~~~l~ell~~--aDvV~l~~P~~~~t~~~i~~~ 195 (303)
T 1qp8_A 147 -GA-------QVRGFSRTPK-----EG------PW-R---------FTNSLEEALRE--ARAAVCALPLNKHTRGLVKYQ 195 (303)
T ss_dssp -TC-------EEEEECSSCC-----CS------SS-C---------CBSCSHHHHTT--CSEEEECCCCSTTTTTCBCHH
T ss_pred -CC-------EEEEECCCcc-----cc------Cc-c---------cCCCHHHHHhh--CCEEEEeCcCchHHHHHhCHH
Confidence 43 6888887532 00 00 0 12468888887 79887542 234678889
Q ss_pred HHHHhhhcCCCCCeEEecCC
Q 007499 424 VLKAMRESDSVKPAIFAMSN 443 (601)
Q Consensus 424 vv~~Ma~~~~erPIIFaLSN 443 (601)
.++.|. +..++.=.|+
T Consensus 196 ~l~~mk----~gailin~sr 211 (303)
T 1qp8_A 196 HLALMA----EDAVFVNVGR 211 (303)
T ss_dssp HHTTSC----TTCEEEECSC
T ss_pred HHhhCC----CCCEEEECCC
Confidence 998883 5678888887
No 170
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=76.41 E-value=1.8 Score=43.46 Aligned_cols=103 Identities=17% Similarity=0.167 Sum_probs=58.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCC--CCCcccCCCHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGD--FMGLREGASLL 399 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~--~~~~~~~~~L~ 399 (601)
.||.|+|||+-|..+|..|..+ | .+++++|+.-+ + .+...-..+...... +....-..++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~--~---~i~~~g~~~~~~~g~~~~~~~~~~~~~~ 65 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-----G-------EDVHFLLRRDY--E---AIAGNGLKVFSINGDFTLPHVKGYRAPE 65 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-----S-------CCEEEECSTTH--H---HHHHTCEEEEETTCCEEESCCCEESCHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEEcCcH--H---HHHhCCCEEEcCCCeEEEeeceeecCHH
Confidence 5899999999999999888653 4 26888887531 1 010000000000000 00001123454
Q ss_pred HHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 400 EVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 400 e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
+ ++ .+|++| ++.. .-..+++++.++....+..+|+.+.|-..
T Consensus 66 ~-~~--~~D~vi-lavk-~~~~~~~l~~l~~~l~~~~~iv~l~nGi~ 107 (312)
T 3hn2_A 66 E-IG--PMDLVL-VGLK-TFANSRYEELIRPLVEEGTQILTLQNGLG 107 (312)
T ss_dssp H-HC--CCSEEE-ECCC-GGGGGGHHHHHGGGCCTTCEEEECCSSSS
T ss_pred H-cC--CCCEEE-EecC-CCCcHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 4 44 378877 5543 33456888888654556778888999875
No 171
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=76.38 E-value=1.9 Score=44.02 Aligned_cols=35 Identities=29% Similarity=0.437 Sum_probs=27.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 321 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 321 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
..||||+|+|.||+..|..|... |-+ -+|.++|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~~-----~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DPS-----IEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CTT-----SEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----CcC-----CeEEEEeCC
Confidence 47999999999999999988653 211 268888875
No 172
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=76.30 E-value=3.1 Score=41.47 Aligned_cols=32 Identities=22% Similarity=0.455 Sum_probs=25.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||.|+|+|..|..+|..+.. .|. +++++|++
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~-----~g~-------~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLK-----MGH-------TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 689999999999999988764 343 58888874
No 173
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=75.74 E-value=11 Score=38.95 Aligned_cols=121 Identities=17% Similarity=0.123 Sum_probs=75.4
Q ss_pred CCccccCcc---hhHHHHHHHHHHHHHHh---------CC-------CCCCCCCceEEEeCcchHHHHHHHHHHHHHHHh
Q 007499 287 FCMFNDDIQ---GTAGVALAGLLGTVRAQ---------GL-------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARM 347 (601)
Q Consensus 287 ~~~FnDDiQ---GTaav~LAgll~Alr~~---------g~-------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~ 347 (601)
+.+.|---- .+|=-+++.+|+..|.. |. .-.+|.+.++.|+|.|..|..+|+.+...
T Consensus 88 I~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~g~tvGIiG~G~IG~~va~~~~~f---- 163 (334)
T 3kb6_A 88 ILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAF---- 163 (334)
T ss_dssp CEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT----
T ss_pred CEEEECCCcCcHHHHHHHHHHHHHHhhccccccccccccccccccccccceecCcEEEEECcchHHHHHHHhhccc----
Confidence 555554332 34445577777765521 10 11345559999999999999999888664
Q ss_pred cCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEee----cCCCCCCCHH
Q 007499 348 AGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGL----SGVGGVFNEE 423 (601)
Q Consensus 348 ~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~----S~~~g~Ft~e 423 (601)
|+ +++.+|+.. + .......+ ...+|.|+++. .|+++=. ...-+.|+++
T Consensus 164 -g~-------~v~~~d~~~-----~---~~~~~~~~----------~~~~l~ell~~--sDivslh~Plt~~T~~li~~~ 215 (334)
T 3kb6_A 164 -GM-------KVLCYDVVK-----R---EDLKEKGC----------VYTSLDELLKE--SDVISLHVPYTKETHHMINEE 215 (334)
T ss_dssp -TC-------EEEEECSSC-----C---HHHHHTTC----------EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHH
T ss_pred -Cc-------eeeecCCcc-----c---hhhhhcCc----------eecCHHHHHhh--CCEEEEcCCCChhhccCcCHH
Confidence 33 677788631 1 11111111 23579999988 7887742 1224899999
Q ss_pred HHHHhhhcCCCCCeEEecCC
Q 007499 424 VLKAMRESDSVKPAIFAMSN 443 (601)
Q Consensus 424 vv~~Ma~~~~erPIIFaLSN 443 (601)
.++.|. +..++.=.|.
T Consensus 216 ~l~~mk----~~a~lIN~aR 231 (334)
T 3kb6_A 216 RISLMK----DGVYLINTAR 231 (334)
T ss_dssp HHHHSC----TTEEEEECSC
T ss_pred HHhhcC----CCeEEEecCc
Confidence 999993 4667776555
No 174
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=75.69 E-value=5.4 Score=41.11 Aligned_cols=143 Identities=15% Similarity=0.100 Sum_probs=86.8
Q ss_pred cCCccccCc---chhHHHHHHHHHHHHHHh---------CC--------CCCCCCCceEEEeCcchHHHHHHHHHHHHHH
Q 007499 286 RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL--------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAA 345 (601)
Q Consensus 286 ~~~~FnDDi---QGTaav~LAgll~Alr~~---------g~--------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~ 345 (601)
.+.+.|--- +.+|=-+++-+|+..|.. |. .-.+|.+.+|.|+|.|..|..+|+.+..
T Consensus 90 gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~--- 166 (330)
T 4e5n_A 90 GVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQG--- 166 (330)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTT---
T ss_pred CcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHH---
Confidence 455555422 334556788888777631 10 1134556999999999999999988754
Q ss_pred HhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeec----CCCCCCC
Q 007499 346 RMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFN 421 (601)
Q Consensus 346 ~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft 421 (601)
.|+ +++.+|+... .....+..-+ ...+|.|+++. .|+++=.- ...+.++
T Consensus 167 --~G~-------~V~~~d~~~~------~~~~~~~~g~----------~~~~l~ell~~--aDvV~l~~P~t~~t~~li~ 219 (330)
T 4e5n_A 167 --WGA-------TLQYHEAKAL------DTQTEQRLGL----------RQVACSELFAS--SDFILLALPLNADTLHLVN 219 (330)
T ss_dssp --SCC-------EEEEECSSCC------CHHHHHHHTE----------EECCHHHHHHH--CSEEEECCCCSTTTTTCBC
T ss_pred --CCC-------EEEEECCCCC------cHhHHHhcCc----------eeCCHHHHHhh--CCEEEEcCCCCHHHHHHhC
Confidence 343 6888887531 0101110001 12479999987 78887532 2347899
Q ss_pred HHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEE
Q 007499 422 EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIV 464 (601)
Q Consensus 422 ~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai 464 (601)
++.++.|. +..+|.=.|+-..--|---.+|++ +|+.-
T Consensus 220 ~~~l~~mk----~gailIN~arg~~vd~~aL~~aL~--~g~i~ 256 (330)
T 4e5n_A 220 AELLALVR----PGALLVNPCRGSVVDEAAVLAALE--RGQLG 256 (330)
T ss_dssp HHHHTTSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSEE
T ss_pred HHHHhhCC----CCcEEEECCCCchhCHHHHHHHHH--hCCcc
Confidence 99999993 577888888744422333344443 55544
No 175
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=75.37 E-value=1.6 Score=43.68 Aligned_cols=32 Identities=19% Similarity=0.352 Sum_probs=25.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
-||+|+|||.||+-.|-.|.. .|+ ++.++|++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~-----~G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK-----HGI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 589999999999999888765 465 47777764
No 176
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=75.32 E-value=2.6 Score=43.65 Aligned_cols=114 Identities=18% Similarity=0.245 Sum_probs=67.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCC-CCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.||.|+|||..|..+|..|+.. |+- ..+.++|.+-=..++- .+|.+.. +|..+. . -..+..+
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~-----~~~-----~el~l~D~~~~k~~g~a~DL~~~~-~~~~~~-~-----i~~~~~~ 72 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQ-----GIA-----QEIGIVDIFKDKTKGDAIDLEDAL-PFTSPK-K-----IYSAEYS 72 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSCHHHHHHHHHHHHTTG-GGSCCC-E-----EEECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEeCChHHHHHHHhhHhhhh-hhcCCc-E-----EEECcHH
Confidence 7999999999999999887753 432 4799999831100000 1222221 232111 0 0122345
Q ss_pred HhcccCCcEEEeecCCC---C-----CC------CHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007499 401 VVRKVKPHVLLGLSGVG---G-----VF------NEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 458 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~---g-----~F------t~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~w 458 (601)
++++ .|++|=+.+.+ | +| -+++++.|.+ ++..-+|+-.|||.. +..+-+++.
T Consensus 73 a~~~--aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~-~~p~a~ilvvtNPvd---i~t~~~~k~ 138 (326)
T 3vku_A 73 DAKD--ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVD-SGFNGIFLVAANPVD---ILTYATWKL 138 (326)
T ss_dssp GGTT--CSEEEECCCCC----------------CHHHHHHHHHT-TTCCSEEEECSSSHH---HHHHHHHHH
T ss_pred HhcC--CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHh-cCCceEEEEccCchH---HHHHHHHHh
Confidence 6666 78776444332 2 23 2577788854 899999999999985 445555543
No 177
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=75.25 E-value=6.4 Score=40.73 Aligned_cols=111 Identities=16% Similarity=0.176 Sum_probs=67.0
Q ss_pred CCCCceEEEeCcchHHHHHHHHHH-HHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCC
Q 007499 318 DFADQKIVVVGAGSAGLGVLKMAV-QAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGA 396 (601)
Q Consensus 318 dl~~~riv~~GAGsAg~GiA~ll~-~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~ 396 (601)
+|.+.+|.|+|.|..|..+|+.+. . .|+ +|+.+|+..- .....+ .+ .. ....
T Consensus 160 ~l~g~~vgIIG~G~IG~~vA~~l~~~-----~G~-------~V~~~d~~~~------~~~~~~-~~---g~-----~~~~ 212 (348)
T 2w2k_A 160 NPRGHVLGAVGLGAIQKEIARKAVHG-----LGM-------KLVYYDVAPA------DAETEK-AL---GA-----ERVD 212 (348)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHT-----TCC-------EEEEECSSCC------CHHHHH-HH---TC-----EECS
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHh-----cCC-------EEEEECCCCc------chhhHh-hc---Cc-----EEeC
Confidence 455599999999999999999886 3 243 6888887421 111111 00 00 0113
Q ss_pred CHHHHhcccCCcEEEeec-C---CCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcE
Q 007499 397 SLLEVVRKVKPHVLLGLS-G---VGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENI 463 (601)
Q Consensus 397 ~L~e~V~~vkptvLIG~S-~---~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Gra 463 (601)
+|.|+++. .|+++=+- . ..+.++++.++.|. +..||.-.|.-..--|-.-.+|++ +|+.
T Consensus 213 ~l~ell~~--aDvVil~vp~~~~t~~li~~~~l~~mk----~gailin~srg~~vd~~aL~~aL~--~~~i 275 (348)
T 2w2k_A 213 SLEELARR--SDCVSVSVPYMKLTHHLIDEAFFAAMK----PGSRIVNTARGPVISQDALIAALK--SGKL 275 (348)
T ss_dssp SHHHHHHH--CSEEEECCCCSGGGTTCBCHHHHHHSC----TTEEEEECSCGGGBCHHHHHHHHH--TTSE
T ss_pred CHHHHhcc--CCEEEEeCCCChHHHHHhhHHHHhcCC----CCCEEEECCCCchhCHHHHHHHHH--hCCc
Confidence 68898887 78877432 1 23788999999883 466777666643222323334443 4553
No 178
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=75.01 E-value=1.6 Score=44.06 Aligned_cols=43 Identities=16% Similarity=0.329 Sum_probs=30.6
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 304 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 304 gll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
|++.+++..| . .+++|+|||.+|.+++..|.+ .| .+|+++++.
T Consensus 108 Gf~~~L~~~~----~---k~vlvlGaGGaaraia~~L~~-----~G-------~~v~V~nRt 150 (269)
T 3phh_A 108 GFYLSLKQKN----Y---QNALILGAGGSAKALACELKK-----QG-------LQVSVLNRS 150 (269)
T ss_dssp HHHHHCC-------C---CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSS
T ss_pred HHHHHHHHcC----C---CEEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 4666665433 5 899999999998888877765 34 379988884
No 179
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=74.92 E-value=15 Score=38.18 Aligned_cols=192 Identities=17% Similarity=0.156 Sum_probs=109.4
Q ss_pred cCCccccCc---chhHHHHHHHHHHHHHHh---------CC-------------CCCCCCCceEEEeCcchHHHHHHHHH
Q 007499 286 RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL-------------SLTDFADQKIVVVGAGSAGLGVLKMA 340 (601)
Q Consensus 286 ~~~~FnDDi---QGTaav~LAgll~Alr~~---------g~-------------~l~dl~~~riv~~GAGsAg~GiA~ll 340 (601)
.+.+.|--- ..+|=-+++.+|+..|.. |. ...+|.+.+|.|+|.|..|..+|+.+
T Consensus 108 gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l 187 (347)
T 1mx3_A 108 GIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRA 187 (347)
T ss_dssp TCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTTCEEEEECCSHHHHHHHHHH
T ss_pred CceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCCCCEEEEEeECHHHHHHHHHH
Confidence 466666432 344555788888887721 21 01356669999999999999999987
Q ss_pred HHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeec----CC
Q 007499 341 VQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GV 416 (601)
Q Consensus 341 ~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~ 416 (601)
... |+ +++.+|++- . + .....+ .. ....+|.|+++. .|+++=.- ..
T Consensus 188 ~~~-----G~-------~V~~~d~~~----~-~---~~~~~~---g~-----~~~~~l~ell~~--aDvV~l~~P~t~~t 237 (347)
T 1mx3_A 188 KAF-----GF-------NVLFYDPYL----S-D---GVERAL---GL-----QRVSTLQDLLFH--SDCVTLHCGLNEHN 237 (347)
T ss_dssp HTT-----TC-------EEEEECTTS----C-T---THHHHH---TC-----EECSSHHHHHHH--CSEEEECCCCCTTC
T ss_pred HHC-----CC-------EEEEECCCc----c-h---hhHhhc---CC-----eecCCHHHHHhc--CCEEEEcCCCCHHH
Confidence 643 43 688888641 1 0 001111 00 012469999887 78877432 22
Q ss_pred CCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEE-----cCCCCCceecCCCeeeecccccccc
Q 007499 417 GGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA-----SGSPFENVDLGNGKIGHVNQANNMY 491 (601)
Q Consensus 417 ~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai~A-----sGSPf~pv~~~~G~~~~p~Q~NN~~ 491 (601)
.+.++++.++.|. +..++.=.|+=..--|..-.+|++ +|+.--| ..-|+++ . +. .--..+|+.
T Consensus 238 ~~li~~~~l~~mk----~gailIN~arg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EP~~~---~-~~--~L~~~~nvi 305 (347)
T 1mx3_A 238 HHLINDFTVKQMR----QGAFLVNTARGGLVDEKALAQALK--EGRIRGAALDVHESEPFSF---S-QG--PLKDAPNLI 305 (347)
T ss_dssp TTSBSHHHHTTSC----TTEEEEECSCTTSBCHHHHHHHHH--HTSEEEEEESCCSSSSCCT---T-SS--TTTTCSSEE
T ss_pred HHHhHHHHHhcCC----CCCEEEECCCChHHhHHHHHHHHH--hCCCcEEEEeecccCCCCC---C-Cc--hHHhCCCEE
Confidence 4788899999883 467888888755433433444443 4554433 2222210 0 11 112468888
Q ss_pred cchhhHHHHHHcCCcccCHHHHHHHHHHHhccC
Q 007499 492 LFPGIGLGTLLSGARFITDGMLQQAAECLASYM 524 (601)
Q Consensus 492 iFPGiglG~l~~~a~~itd~m~~aAA~aLA~~v 524 (601)
+-|=++- -+.....+|...+++.+....
T Consensus 306 ~tPHia~-----~t~~~~~~~~~~~~~ni~~~~ 333 (347)
T 1mx3_A 306 CTPHAAW-----YSEQASIEMREEAAREIRRAI 333 (347)
T ss_dssp ECSSCTT-----CCHHHHHHHHHHHHHHHHHHH
T ss_pred EEchHHH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 8887752 222223455555566555554
No 180
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=74.90 E-value=5 Score=40.07 Aligned_cols=32 Identities=31% Similarity=0.468 Sum_probs=25.5
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~G-AGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||.|+| +|..|..+|..+.. .|. +++++|++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~-----~G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRA-----SGY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHT-----TTC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 5899999 99999999988764 343 58888864
No 181
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=74.82 E-value=6.2 Score=35.55 Aligned_cols=74 Identities=30% Similarity=0.371 Sum_probs=41.1
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.+|+|.|| |-.|..+++.|++ .| -+++.++++.-- ...+......+..- +. .+..++.+
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~-----~g-------~~V~~~~r~~~~---~~~~~~~~~~~~~~--D~---~~~~~~~~ 63 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQ-----AG-------YEVTVLVRDSSR---LPSEGPRPAHVVVG--DV---LQAADVDK 63 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEESCGGG---SCSSSCCCSEEEES--CT---TSHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHH-----CC-------CeEEEEEeChhh---cccccCCceEEEEe--cC---CCHHHHHH
Confidence 78999998 7666666666654 34 368888875210 01110111111111 00 12245788
Q ss_pred HhcccCCcEEEeecCCC
Q 007499 401 VVRKVKPHVLLGLSGVG 417 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~ 417 (601)
+++. +|++|=+.+..
T Consensus 64 ~~~~--~d~vi~~a~~~ 78 (206)
T 1hdo_A 64 TVAG--QDAVIVLLGTR 78 (206)
T ss_dssp HHTT--CSEEEECCCCT
T ss_pred HHcC--CCEEEECccCC
Confidence 8876 79999777643
No 182
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=74.51 E-value=2.2 Score=44.09 Aligned_cols=115 Identities=17% Similarity=0.241 Sum_probs=65.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCC-CCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.||.|+|||+.|.++|.+|.. .|+. .+.++|.+-=..++ ..+|.+.. .|....... ....+. +
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~-----~~~~------~v~L~Di~~~~~~g~~~dl~~~~-~~~~~~~~v---~~t~d~-~ 71 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGL-----KELG------DVVLFDIAEGTPQGKGLDIAESS-PVDGFDAKF---TGANDY-A 71 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSSSHHHHHHHHHHHHH-HHHTCCCCE---EEESSG-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEeCCchhHHHHHHHHhchh-hhcCCCCEE---EEeCCH-H
Confidence 799999999999999887765 3541 59999985211100 01222221 122111111 112344 7
Q ss_pred HhcccCCcEEEeecC---CCCC-----C--C----HHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007499 401 VVRKVKPHVLLGLSG---VGGV-----F--N----EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 458 (601)
Q Consensus 401 ~V~~vkptvLIG~S~---~~g~-----F--t----~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~w 458 (601)
++++ .|++|=+.+ .+|- | + +++++.|.+ ++..-+|+-.|||.. ....-+++.
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~-~~p~a~iivvtNPvd---~~t~~~~k~ 137 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKK-YAPEAFVICITNPLD---AMVWALQKF 137 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHH---HHHHHHHHH
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHH-HCCCeEEEecCCCcH---HHHHHHHHh
Confidence 7887 788774443 3342 1 2 456666644 788889999999985 334444443
No 183
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=74.41 E-value=12 Score=38.72 Aligned_cols=126 Identities=14% Similarity=0.140 Sum_probs=79.2
Q ss_pred cCCccccCc---chhHHHHHHHHHHHHHHh---------CC------CCCCCCCceEEEeCcchHHHHHHHHHHHHHHHh
Q 007499 286 RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARM 347 (601)
Q Consensus 286 ~~~~FnDDi---QGTaav~LAgll~Alr~~---------g~------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~ 347 (601)
.+++.|--- +.+|=-+++.+|+..|.. |. .-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 112 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~~---- 187 (335)
T 2g76_A 112 GILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSF---- 187 (335)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHTT----
T ss_pred CeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHHC----
Confidence 466666432 234555788888877641 10 11345559999999999999999887643
Q ss_pred cCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeec----CCCCCCCHH
Q 007499 348 AGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNEE 423 (601)
Q Consensus 348 ~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft~e 423 (601)
|+ +++.+|+.. ++. .+.... ....+|.|+++. .|+++=+- ...+.|+++
T Consensus 188 -G~-------~V~~~d~~~---------~~~---~~~~~g-----~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~ 240 (335)
T 2g76_A 188 -GM-------KTIGYDPII---------SPE---VSASFG-----VQQLPLEEIWPL--CDFITVHTPLLPSTTGLLNDN 240 (335)
T ss_dssp -TC-------EEEEECSSS---------CHH---HHHHTT-----CEECCHHHHGGG--CSEEEECCCCCTTTTTSBCHH
T ss_pred -CC-------EEEEECCCc---------chh---hhhhcC-----ceeCCHHHHHhc--CCEEEEecCCCHHHHHhhCHH
Confidence 42 688888641 111 111100 012479999987 79887542 124678899
Q ss_pred HHHHhhhcCCCCCeEEecCCCCC
Q 007499 424 VLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 424 vv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
.++.|. +..++.=.|.-..
T Consensus 241 ~l~~mk----~gailIN~arg~v 259 (335)
T 2g76_A 241 TFAQCK----KGVRVVNCARGGI 259 (335)
T ss_dssp HHTTSC----TTEEEEECSCTTS
T ss_pred HHhhCC----CCcEEEECCCccc
Confidence 999883 5678888887443
No 184
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=74.33 E-value=1.8 Score=42.21 Aligned_cols=31 Identities=13% Similarity=0.305 Sum_probs=24.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||.|+|+|..|..+|..+.. |. +++++|++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~------g~-------~V~~~~~~ 32 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR------RF-------PTLVWNRT 32 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT------TS-------CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHhC------CC-------eEEEEeCC
Confidence 379999999999999887753 42 47788864
No 185
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=74.30 E-value=1.6 Score=43.64 Aligned_cols=32 Identities=28% Similarity=0.465 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||.|+|+|..|.++|..|... |. +++++|++
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 39 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA-----GL-------STWGADLN 39 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 6899999999999999988753 43 58888874
No 186
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=74.12 E-value=2.9 Score=40.94 Aligned_cols=21 Identities=19% Similarity=0.221 Sum_probs=18.6
Q ss_pred ceEEEeCcchHHHHHHHHHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQ 342 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~ 342 (601)
.||.|+|+|..|..+|..|..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~ 24 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLAR 24 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHh
Confidence 489999999999999988764
No 187
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=73.66 E-value=1.4 Score=47.53 Aligned_cols=33 Identities=33% Similarity=0.559 Sum_probs=29.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||+|+|+|..|.-+|..|+.+ |+ .+|.++|.+
T Consensus 41 ~~VlvvG~GGlGs~va~~La~a-----Gv------g~i~ivD~D 73 (434)
T 1tt5_B 41 CKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 73 (434)
T ss_dssp CCEEEECSSTHHHHHHHHHHHT-----TC------CCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 9999999999999999999875 44 689999987
No 188
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=73.34 E-value=1.4 Score=44.88 Aligned_cols=113 Identities=19% Similarity=0.245 Sum_probs=64.3
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCC-CCCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
||.|+|||+.|..+|-+|+. .++- ..|+|+|.+-=-.++ ..+|.+. .+|.++. .. ...+ .++
T Consensus 2 KI~IiGaG~vG~~~a~~l~~-----~~~~-----~el~L~Di~~~k~~g~a~dl~~~-~~~~~~~-~v----~~~~-~~a 64 (310)
T 2xxj_A 2 KVGIVGSGMVGSATAYALAL-----LGVA-----REVVLVDLDRKLAQAHAEDILHA-TPFAHPV-WV----WAGS-YGD 64 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSSHHHHHHHHHHHHTT-GGGSCCC-EE----EECC-GGG
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCChhHHHHHHHHHHHh-HhhcCCe-EE----EECC-HHH
Confidence 89999999999998876654 2432 479999985200000 0012211 1222111 00 0123 566
Q ss_pred hcccCCcEEEeecCC---CCC-------C----CHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007499 402 VRKVKPHVLLGLSGV---GGV-------F----NEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 458 (601)
Q Consensus 402 V~~vkptvLIG~S~~---~g~-------F----t~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~w 458 (601)
+++ .|++|=+.+. +|- + -+++++.|.+ ++..-+|+-.|||.. .+.+-+++.
T Consensus 65 ~~~--aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~tNPv~---~~t~~~~k~ 129 (310)
T 2xxj_A 65 LEG--ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLE-AAPEAVLLVATNPVD---VMTQVAYAL 129 (310)
T ss_dssp GTT--EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECSSSHH---HHHHHHHHH
T ss_pred hCC--CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHH-HCCCcEEEEecCchH---HHHHHHHHH
Confidence 777 7888744333 332 1 2456666643 788999999999986 444555553
No 189
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=72.16 E-value=11 Score=39.15 Aligned_cols=197 Identities=15% Similarity=0.099 Sum_probs=110.7
Q ss_pred cCCcccc-C-cchhHHHHHHHHHHHHHHh---------C---C-------------CCCCCCCceEEEeCcchHHHHHHH
Q 007499 286 RFCMFND-D-IQGTAGVALAGLLGTVRAQ---------G---L-------------SLTDFADQKIVVVGAGSAGLGVLK 338 (601)
Q Consensus 286 ~~~~FnD-D-iQGTaav~LAgll~Alr~~---------g---~-------------~l~dl~~~riv~~GAGsAg~GiA~ 338 (601)
.+++.|. + -..+|=-+++-+|+..|.. | . .-.+|.+.+|.|+|.|..|..+|+
T Consensus 98 gI~V~n~pg~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA~ 177 (352)
T 3gg9_A 98 GVVVLEGKGSPVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVAG 177 (352)
T ss_dssp TCEEECCCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECCSHHHHHHHH
T ss_pred CeEEEECCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCCCCEEEEEeECHHHHHHHH
Confidence 4666652 1 2345556778888777631 1 0 123556699999999999999999
Q ss_pred HHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeec----
Q 007499 339 MAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS---- 414 (601)
Q Consensus 339 ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S---- 414 (601)
.+... |+ +++.+|+..- . ..+... +.....+|.|+++. .|+++=.-
T Consensus 178 ~l~~~-----G~-------~V~~~d~~~~---------~---~~~~~~----g~~~~~~l~ell~~--aDiV~l~~Plt~ 227 (352)
T 3gg9_A 178 YGRAF-----GM-------NVLVWGRENS---------K---ERARAD----GFAVAESKDALFEQ--SDVLSVHLRLND 227 (352)
T ss_dssp HHHHT-----TC-------EEEEECSHHH---------H---HHHHHT----TCEECSSHHHHHHH--CSEEEECCCCST
T ss_pred HHHhC-----CC-------EEEEECCCCC---------H---HHHHhc----CceEeCCHHHHHhh--CCEEEEeccCcH
Confidence 88653 43 6888887420 0 011110 00112479999988 78887431
Q ss_pred CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCceecCCCeeeecccccccccch
Q 007499 415 GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFP 494 (601)
Q Consensus 415 ~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai~AsGSPf~pv~~~~G~~~~p~Q~NN~~iFP 494 (601)
...+.|+++.++.|. +..++.=.|+-..--|-.-.+|++ +|+.-.|.=-=|++-..+ ....--+..|+.+-|
T Consensus 228 ~t~~li~~~~l~~mk----~gailIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~--~~~pL~~~~nvilTP 299 (352)
T 3gg9_A 228 ETRSIITVADLTRMK----PTALFVNTSRAELVEENGMVTALN--RGRPGMAAIDVFETEPIL--QGHTLLRMENCICTP 299 (352)
T ss_dssp TTTTCBCHHHHTTSC----TTCEEEECSCGGGBCTTHHHHHHH--HTSSSEEEECCCSSSCCC--SCCGGGGCTTEEECC
T ss_pred HHHHhhCHHHHhhCC----CCcEEEECCCchhhcHHHHHHHHH--hCCccEEEecccCCCCCC--CCChhhcCCCEEECC
Confidence 234789999999993 578998888755444555556654 455322210011110000 001112345788888
Q ss_pred hhHHHHHHcCCcccCHHHHHHHHHHHhccCC
Q 007499 495 GIGLGTLLSGARFITDGMLQQAAECLASYMT 525 (601)
Q Consensus 495 GiglG~l~~~a~~itd~m~~aAA~aLA~~v~ 525 (601)
=+|- ....--+.|...+++-|.....
T Consensus 300 Hia~-----~t~e~~~~~~~~~~~ni~~~~~ 325 (352)
T 3gg9_A 300 HIGY-----VERESYEMYFGIAFQNILDILQ 325 (352)
T ss_dssp SCTT-----CBHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCC-----CCHHHHHHHHHHHHHHHHHHHc
Confidence 7632 1111224566666666666653
No 190
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=71.99 E-value=2.3 Score=40.58 Aligned_cols=32 Identities=22% Similarity=0.400 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.||+..|..|.. .|. ++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGR-----ARK-------NILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCC
Confidence 689999999999999988765 343 69999974
No 191
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=71.91 E-value=2.3 Score=42.37 Aligned_cols=34 Identities=29% Similarity=0.588 Sum_probs=27.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.||+..|..|.. .|. .++.++|+..
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 689999999999999998854 343 2699999874
No 192
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=71.31 E-value=2.3 Score=43.14 Aligned_cols=116 Identities=19% Similarity=0.291 Sum_probs=67.2
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec--Cc-cccCCCCCCChhhhccccccCCCCCcccCCCH
Q 007499 323 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK--DG-LITKERKNLDPAAAPFAKDPGDFMGLREGASL 398 (601)
Q Consensus 323 riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~--~G-Li~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L 398 (601)
||+|.|| |..|..++..|+. .|+- ..+.|+|. +- .+.....+|.+.. ++.....+.. ....++
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~~-----~el~L~Di~~~~~~~~~~~~dl~~~~-~~~~~~~~i~--~~~d~l 68 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPFM-----KDLVLIGREHSINKLEGLREDIYDAL-AGTRSDANIY--VESDEN 68 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTTC-----CEEEEEECGGGHHHHHHHHHHHHHHH-TTSCCCCEEE--EEETTC
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCCC-----CEEEEEcCCCchhhhHHHHHHHHHhH-HhcCCCeEEE--eCCcch
Confidence 7999999 9999888777653 3431 46999997 31 0000000122211 2221100100 001237
Q ss_pred HHHhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007499 399 LEVVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 458 (601)
Q Consensus 399 ~e~V~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~w 458 (601)
.+++++ .|++|=+.+.+ |- .+++++++|.+ ++ +.+|+-.|||.. ...+-+++.
T Consensus 69 ~~al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~-~~-~~~vlv~SNPv~---~~t~~~~k~ 135 (313)
T 1hye_A 69 LRIIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAE-IC-DTKIFVITNPVD---VMTYKALVD 135 (313)
T ss_dssp GGGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HC-CCEEEECSSSHH---HHHHHHHHH
T ss_pred HHHhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHH-hC-CeEEEEecCcHH---HHHHHHHHh
Confidence 788888 78888665544 32 35678888854 77 889999999985 444555553
No 193
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=71.21 E-value=8 Score=38.24 Aligned_cols=104 Identities=16% Similarity=0.230 Sum_probs=58.6
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCCh----hhhccccccCCCCCcccCC
Q 007499 322 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP----AAAPFAKDPGDFMGLREGA 396 (601)
Q Consensus 322 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~----~k~~fa~~~~~~~~~~~~~ 396 (601)
.+|+|.|| |-.|..+++.|++. |-. -+++.+|+...-.. ...+.. ....+..- + ..+..
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~-----g~~-----~~v~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~--D---l~d~~ 88 (346)
T 4egb_A 25 MNILVTGGAGFIGSNFVHYMLQS-----YET-----YKIINFDALTYSGN-LNNVKSIQDHPNYYFVKG--E---IQNGE 88 (346)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHH-----CTT-----EEEEEEECCCTTCC-GGGGTTTTTCTTEEEEEC--C---TTCHH
T ss_pred CeEEEECCccHHHHHHHHHHHhh-----CCC-----cEEEEEeccccccc-hhhhhhhccCCCeEEEEc--C---CCCHH
Confidence 89999998 77787777777653 421 26777877532111 011111 01111111 1 11234
Q ss_pred CHHHHhcccCCcEEEeecCCCCCC----------------CHHHHHHhhhcCCCCCeEEecC
Q 007499 397 SLLEVVRKVKPHVLLGLSGVGGVF----------------NEEVLKAMRESDSVKPAIFAMS 442 (601)
Q Consensus 397 ~L~e~V~~vkptvLIG~S~~~g~F----------------t~evv~~Ma~~~~erPIIFaLS 442 (601)
++.++++..++|++|=+.+....- |..+++++.+ ..-+-+||.=|
T Consensus 89 ~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~~~~~v~~SS 149 (346)
T 4egb_A 89 LLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKK-YPHIKLVQVST 149 (346)
T ss_dssp HHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHH-STTSEEEEEEE
T ss_pred HHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEeCc
Confidence 688889888899999877643321 3567888754 44445887543
No 194
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=70.77 E-value=3.9 Score=42.65 Aligned_cols=121 Identities=18% Similarity=0.171 Sum_probs=66.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
.||+|+|+|.+|-.+|+.|.+. .++.++|++ .++ +......+....-+. .+..+|.++
T Consensus 17 ~~v~IiGaG~iG~~ia~~L~~~-------------~~V~V~~R~----~~~--a~~la~~~~~~~~d~---~~~~~l~~l 74 (365)
T 2z2v_A 17 MKVLILGAGNIGRAIAWDLKDE-------------FDVYIGDVN----NEN--LEKVKEFATPLKVDA---SNFDKLVEV 74 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-------------SEEEEEESC----HHH--HHHHTTTSEEEECCT---TCHHHHHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHcC-------------CeEEEEECC----HHH--HHHHHhhCCeEEEec---CCHHHHHHH
Confidence 8999999999998888877542 268888874 111 111111111000000 123468888
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCce
Q 007499 402 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENV 474 (601)
Q Consensus 402 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt~Grai~AsGSPf~pv 474 (601)
+++ +|++|-+. |..+..+++++-.+ ..=.++-+|.-.+.++.--++|.+ .|. .+..|+=|+|-
T Consensus 75 l~~--~DvVIn~~--P~~~~~~v~~a~l~---~G~~~vD~s~~~~~~~~l~~~Ak~--aG~-~~l~g~G~dPG 137 (365)
T 2z2v_A 75 MKE--FELVIGAL--PGFLGFKSIKAAIK---SKVDMVDVSFMPENPLELRDEAEK--AQV-TIVFDAGFAPG 137 (365)
T ss_dssp HTT--CSCEEECC--CHHHHHHHHHHHHH---TTCCEEECCCCSSCGGGGHHHHHH--TTC-EEECSCBTTTB
T ss_pred HhC--CCEEEECC--ChhhhHHHHHHHHH---hCCeEEEccCCcHHHHHHHHHHHH--cCC-EEEECCCCcch
Confidence 886 89999763 44456677665433 233466678632222222344433 453 34566656664
No 195
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=70.66 E-value=3.3 Score=36.92 Aligned_cols=32 Identities=28% Similarity=0.547 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|+|..|..+|+.+.. .| .+++++|++
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~-----~g-------~~V~vid~~ 51 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASS-----SG-------HSVVVVDKN 51 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 899999999999999888764 34 268999885
No 196
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=70.62 E-value=1.9 Score=48.71 Aligned_cols=33 Identities=36% Similarity=0.518 Sum_probs=29.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||+|+|+|..|.-+|..|+.+++ .+|.++|.+
T Consensus 18 s~VlVVGaGGLGsevak~La~aGV-----------G~ItlvD~D 50 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLTGF-----------SHIDLIDLD 50 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-----------CEEEEEECC
T ss_pred CeEEEECcCHHHHHHHHHHHHcCC-----------CeEEEecCC
Confidence 999999999999999999987644 689999987
No 197
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=70.51 E-value=4.5 Score=43.52 Aligned_cols=45 Identities=27% Similarity=0.225 Sum_probs=30.1
Q ss_pred CcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCH
Q 007499 407 PHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTA 452 (601)
Q Consensus 407 ptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tp 452 (601)
.+++|-.||.+--.|+++.+.+.+...... ++-+|||....|-++
T Consensus 122 g~iVV~~STv~pgtt~~l~~~l~e~~~~~d-~~v~~~Pe~a~eG~a 166 (446)
T 4a7p_A 122 PSVIVTKSTVPVGTGDEVERIIAEVAPNSG-AKVVSNPEFLREGAA 166 (446)
T ss_dssp CCEEEECSCCCTTHHHHHHHHHHHHSTTSC-CEEEECCCCCCTTSH
T ss_pred CCEEEEeCCCCchHHHHHHHHHHHhCCCCC-ceEEeCcccccccch
Confidence 467778888876677887776654222222 456789988777776
No 198
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=70.47 E-value=2.6 Score=40.63 Aligned_cols=32 Identities=19% Similarity=0.335 Sum_probs=27.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.||+..|..+.. .|. ++.++|++
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 47 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSAR-----YML-------KTLVIGET 47 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred cCEEEECccHHHHHHHHHHHH-----CCC-------cEEEEecc
Confidence 689999999999999988765 343 59999997
No 199
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=70.33 E-value=2.9 Score=42.59 Aligned_cols=115 Identities=15% Similarity=0.224 Sum_probs=67.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCC-CCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.||.|+|||+.|..+|-.|.. .|+- ..|+|+|.+-=..++ ..+|.+. .+|....... ..+..+
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~-----~~~~-----~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v-----~~~~~~ 70 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVN-----QSIV-----DELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRV-----KAGEYS 70 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HCSC-----SEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEE-----EECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEE-----EeCCHH
Confidence 699999999999998887653 2441 479999975200000 0123322 2333111000 113466
Q ss_pred HhcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007499 401 VVRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 458 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~w 458 (601)
++++ .|++|=+.+.|.. .=+++++.|.+ ++..-+|+-.|||.. ...+-+++.
T Consensus 71 a~~~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~viv~tNPv~---~~t~~~~k~ 136 (317)
T 3d0o_A 71 DCHD--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMA-SKFDGIFLVATNPVD---ILAYATWKF 136 (317)
T ss_dssp GGTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-TTCCSEEEECSSSHH---HHHHHHHHH
T ss_pred HhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHH-hCCCcEEEEecCcHH---HHHHHHHHH
Confidence 7777 7888755444422 11356666644 788999999999985 344455453
No 200
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=70.32 E-value=2 Score=42.08 Aligned_cols=33 Identities=27% Similarity=0.564 Sum_probs=27.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.||+..|..|.. .|+ ++.++|+..
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 689999999999999988764 353 699999864
No 201
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=70.02 E-value=5 Score=39.15 Aligned_cols=99 Identities=20% Similarity=0.175 Sum_probs=56.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
.||.|+|+|..|..+|..+.. .|.. .+++++|++. .+...++...- . .....++.++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~-----~g~~-----~~V~~~d~~~-----------~~~~~~~~~g~-~-~~~~~~~~~~ 58 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR-----SGFK-----GKIYGYDINP-----------ESISKAVDLGI-I-DEGTTSIAKV 58 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-----TTCC-----SEEEEECSCH-----------HHHHHHHHTTS-C-SEEESCGGGG
T ss_pred cEEEEEecCHHHHHHHHHHHh-----cCCC-----cEEEEEeCCH-----------HHHHHHHHCCC-c-ccccCCHHHH
Confidence 479999999999999988764 3431 3688888741 11111111000 0 0012356677
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 402 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 402 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
++. ++|++| ++. |...+.++++.+.....+..||.-+||-..
T Consensus 59 ~~~-~aDvVi-lav-p~~~~~~v~~~l~~~l~~~~iv~~~~~~~~ 100 (281)
T 2g5c_A 59 EDF-SPDFVM-LSS-PVRTFREIAKKLSYILSEDATVTDQGSVKG 100 (281)
T ss_dssp GGT-CCSEEE-ECS-CHHHHHHHHHHHHHHSCTTCEEEECCSCCT
T ss_pred hcC-CCCEEE-EcC-CHHHHHHHHHHHHhhCCCCcEEEECCCCcH
Confidence 761 378877 333 323456777766433345667777777543
No 202
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=70.00 E-value=1.9 Score=43.60 Aligned_cols=106 Identities=15% Similarity=0.204 Sum_probs=55.6
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCC-CcccCCCHH
Q 007499 321 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFM-GLREGASLL 399 (601)
Q Consensus 321 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~-~~~~~~~L~ 399 (601)
..||.|+|+|+-|..+|..|..+ |. +++++ ++.--. +.+.........+..+.. ...-..++.
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~-----G~-------~V~l~-~~~~~~---~~i~~~g~~~~~~~~~~~~~~~~~~~~~ 82 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARA-----GH-------EVILI-ARPQHV---QAIEATGLRLETQSFDEQVKVSASSDPS 82 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHT-----TC-------EEEEE-CCHHHH---HHHHHHCEEEECSSCEEEECCEEESCGG
T ss_pred CCcEEEECcCHHHHHHHHHHHHC-----CC-------eEEEE-EcHhHH---HHHHhCCeEEEcCCCcEEEeeeeeCCHH
Confidence 38999999999999999988653 42 45555 321100 000000000000000000 000112343
Q ss_pred HHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 007499 400 EVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMN 447 (601)
Q Consensus 400 e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~ 447 (601)
+ ++ .+|++| ++. +-...+++++.++....+..+|..++|....
T Consensus 83 ~-~~--~~D~vi-lav-k~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~ 125 (318)
T 3hwr_A 83 A-VQ--GADLVL-FCV-KSTDTQSAALAMKPALAKSALVLSLQNGVEN 125 (318)
T ss_dssp G-GT--TCSEEE-ECC-CGGGHHHHHHHHTTTSCTTCEEEEECSSSSH
T ss_pred H-cC--CCCEEE-EEc-ccccHHHHHHHHHHhcCCCCEEEEeCCCCCc
Confidence 3 33 378766 443 2336789999986534556788889998864
No 203
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=69.97 E-value=1.5 Score=45.17 Aligned_cols=114 Identities=19% Similarity=0.279 Sum_probs=66.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc--cccCCC-CCCChhhhccccccCCCCCcccCCCH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG--LITKER-KNLDPAAAPFAKDPGDFMGLREGASL 398 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G--Li~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L 398 (601)
.||.|+|||..|.++|..+.. .|+ ..+.++|.+- -..++. .+|.+. .++........ ...+
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~-----~g~------~~v~l~D~~~~~~~~~g~a~dl~~~-~~~~~~~~~i~---~t~d- 72 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQ-----KEL------ADVVLVDIPQLENPTKGKALDMLEA-SPVQGFDANII---GTSD- 72 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECCGGGHHHHHHHHHHHHHH-HHHHTCCCCEE---EESC-
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEeccchHHHHHHhhhhHHHh-hhhccCCCEEE---EcCC-
Confidence 799999999999999988865 344 2799999861 111110 123222 13322111110 1122
Q ss_pred HHHhcccCCcEEEeecCC---CCC-----C------CHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhc
Q 007499 399 LEVVRKVKPHVLLGLSGV---GGV-----F------NEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFK 457 (601)
Q Consensus 399 ~e~V~~vkptvLIG~S~~---~g~-----F------t~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~ 457 (601)
.+++++ .|++|=+.+. ||- | -+++++.+.+ ++..-+|+-.|||.. ....-+++
T Consensus 73 ~~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~-~~p~a~vlvvsNPvd---~~t~~~~k 139 (315)
T 3tl2_A 73 YADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAK-HSPNAIIVVLTNPVD---AMTYSVFK 139 (315)
T ss_dssp GGGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHH---HHHHHHHH
T ss_pred HHHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEECCChHH---HHHHHHHH
Confidence 456766 7887744433 331 2 2466777754 788889999999985 44444544
No 204
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=69.97 E-value=4.3 Score=42.30 Aligned_cols=118 Identities=14% Similarity=0.215 Sum_probs=67.0
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCC-CCCCChhhhccccccCCCCCcccCC
Q 007499 319 FADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGA 396 (601)
Q Consensus 319 l~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fa~~~~~~~~~~~~~ 396 (601)
+...||.|+|| |..|..+|..++. .|+. ..+.++|.+-=..++ ..+|.+. .|.. ... ....
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~~-----~evvLiDi~~~k~~g~a~DL~~~--~~~~--~~i---~~t~ 68 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRLT-----PNLCLYDPFAVGLEGVAEEIRHC--GFEG--LNL---TFTS 68 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTCC-----SCEEEECSCHHHHHHHHHHHHHH--CCTT--CCC---EEES
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCCC-----CEEEEEeCCchhHHHHHHhhhhC--cCCC--Cce---EEcC
Confidence 44589999998 9999998855443 4652 369999974110000 0123332 2311 111 1235
Q ss_pred CHHHHhcccCCcEEEeecCC---CCC-----------CCHHHHHHhhhcCCCCCe-EEecCCCCCccCCCHHHHhccc
Q 007499 397 SLLEVVRKVKPHVLLGLSGV---GGV-----------FNEEVLKAMRESDSVKPA-IFAMSNPTMNAECTAADAFKHA 459 (601)
Q Consensus 397 ~L~e~V~~vkptvLIG~S~~---~g~-----------Ft~evv~~Ma~~~~erPI-IFaLSNPt~~aE~tpeda~~wt 459 (601)
++.+++++ .|++|=+.+. +|- .-+++++.+.+ ++..-+ |+-.|||.. .+..-+++.+
T Consensus 69 d~~~al~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~-~~p~a~~vlvvsNPvd---~~t~i~~k~s 140 (343)
T 3fi9_A 69 DIKEALTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKS-YCPDCKHVIIIFNPAD---ITGLVTLIYS 140 (343)
T ss_dssp CHHHHHTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHH-HCTTCCEEEECSSSHH---HHHHHHHHHH
T ss_pred CHHHHhCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hccCcEEEEEecCchH---HHHHHHHHHc
Confidence 78899988 7988744433 331 12355566643 777785 888999974 4444454443
No 205
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=69.27 E-value=1.6 Score=45.03 Aligned_cols=117 Identities=19% Similarity=0.265 Sum_probs=65.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCC-CCCChhhhccccccCCCCCcccCCCHH
Q 007499 321 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLL 399 (601)
Q Consensus 321 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~ 399 (601)
..||.|+|||..|.++|..|.. .|+. .+.++|.+-=..++- .+|.+.. .+....... ....+ .
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~-----~~~~------~v~l~Di~~~~~~g~a~dL~~~~-~~~~~~~~v---~~t~d-~ 68 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALI-----KQLG------DVVLFDIAQGMPNGKALDLLQTC-PIEGVDFKV---RGTND-Y 68 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSSSHHHHHHHHHHTTH-HHHTCCCCE---EEESC-G
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCCc------eEEEEeCChHHHHHHHHHHHhhh-hhcCCCcEE---EEcCC-H
Confidence 3799999999999999887764 3541 699999852110000 0122111 111111111 01123 4
Q ss_pred HHhcccCCcEEEeecCCC---CC-----C--C----HHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhccc
Q 007499 400 EVVRKVKPHVLLGLSGVG---GV-----F--N----EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA 459 (601)
Q Consensus 400 e~V~~vkptvLIG~S~~~---g~-----F--t----~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt 459 (601)
+++++ .|++|=+.+.| |- | + +++++.+.+ ++..-+|+-.|||.. ...+-+++.+
T Consensus 69 ~a~~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~-~~p~a~vivvtNPvd---~~t~~~~k~s 136 (321)
T 3p7m_A 69 KDLEN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKH-NCPNAFVICITNPLD---IMVNMLQKFS 136 (321)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHH---HHHHHHHHHH
T ss_pred HHHCC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHH-HCCCcEEEEecCchH---HHHHHHHHhc
Confidence 67777 78877444433 32 1 2 456666644 788889999999985 3444455543
No 206
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=69.16 E-value=21 Score=36.44 Aligned_cols=102 Identities=10% Similarity=0.089 Sum_probs=64.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccc-cCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKD-PGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~-~~~~~~~~~~~~L~e 400 (601)
.+++|+|+|..|-.+++.+... .+. ++|+++|+. + .......|.+. .-+. ... ++.|
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~----~----a~~la~~l~~~~g~~~---~~~-~~~e 179 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSAR----FAL------EAILVHDPY----A----SPEILERIGRRCGVPA---RMA-APAD 179 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECTT----C----CHHHHHHHHHHHTSCE---EEC-CHHH
T ss_pred cEEEEECccHHHHHHHHHHHHh----CCC------cEEEEECCc----H----HHHHHHHHHHhcCCeE---EEe-CHHH
Confidence 8999999999988887766542 232 689999996 1 12222222211 1010 123 8999
Q ss_pred HhcccCCcEEEeecCCC-CCCCHHHHHHhhhcCCCCCeEEecCC--CCCccCCCHHHH
Q 007499 401 VVRKVKPHVLLGLSGVG-GVFNEEVLKAMRESDSVKPAIFAMSN--PTMNAECTAADA 455 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~-g~Ft~evv~~Ma~~~~erPIIFaLSN--Pt~~aE~tpeda 455 (601)
+++. .|++|-++... -.|..++ ..+..+|..++. |. +.|+.++-.
T Consensus 180 av~~--aDIVi~aT~s~~pvl~~~~-------l~~G~~V~~vGs~~p~-~~El~~~~~ 227 (313)
T 3hdj_A 180 IAAQ--ADIVVTATRSTTPLFAGQA-------LRAGAFVGAIGSSLPH-TRELDDEAL 227 (313)
T ss_dssp HHHH--CSEEEECCCCSSCSSCGGG-------CCTTCEEEECCCSSTT-CCCCCHHHH
T ss_pred HHhh--CCEEEEccCCCCcccCHHH-------cCCCcEEEECCCCCCc-hhhcCHHHH
Confidence 9988 89999765432 3444332 335778988876 44 469998754
No 207
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=69.16 E-value=2.9 Score=41.09 Aligned_cols=33 Identities=27% Similarity=0.316 Sum_probs=26.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.||+..|..+.. .|. ++.++|++.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 38 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGM-----RGL-------SFRFVDPLP 38 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 689999999999999987753 343 689999864
No 208
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=69.10 E-value=2.7 Score=43.33 Aligned_cols=141 Identities=13% Similarity=0.109 Sum_probs=80.3
Q ss_pred CCeeEEEEecCccccccCCCCCccccccchhhhHHHhhcCCCCCceecEEeeccCCchhcccCccccccccCCCChhhhh
Q 007499 170 QQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYL 249 (601)
Q Consensus 170 ~~v~viVVTDG~rILGLGDlG~~Gm~I~iGKl~LY~a~gGI~P~~~lPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~ 249 (601)
...++.||||.+.=|- .- +..-=||. .+|+.+-+| ++..+++- +
T Consensus 33 ~~Mki~IvTDSt~dL~------------~e----~~~~~~I~---vvPL~v~~~--~~~Y~D~~---------------d 76 (315)
T 3fys_A 33 GSMNIAVVTDSTAYIP------------KE----MREQHQIH---MIPLQVVFR--EETYREEI---------------E 76 (315)
T ss_dssp -CCCEEEEEEGGGCCC------------HH----HHHHHTEE---EECCEEECS--SCEEEBTT---------------T
T ss_pred CCCcEEEEEECCCCCC------------HH----HHHhCCeE---EEeEEEEEC--CEEEECCC---------------C
Confidence 3457999999987442 11 11122677 899888884 44444331 1
Q ss_pred HhHHHHHHHHHH--hCCCeEEeeCCCChHHHHHHHHhccCCccccCcch-hHHHHHHHHHHHHHHhCCCCCCCCCceEEE
Q 007499 250 SIVDEFMEAVHA--RWPKAIFEDFQMKWAFETLERYRKRFCMFNDDIQG-TAGVALAGLLGTVRAQGLSLTDFADQKIVV 326 (601)
Q Consensus 250 ~~vdefv~av~~--~~P~~l~EDf~~~~Af~iL~ryr~~~~~FnDDiQG-Taav~LAgll~Alr~~g~~l~dl~~~riv~ 326 (601)
--.+||.+.+++ ..|+. |.|+--++++.|++-.-= .||+=. |=+-.|.|-+++.+.....+.+ .+|-+
T Consensus 77 i~~~efy~~m~~~~~~p~T-----SqPs~~~~~~~fe~l~~~-~~~Ii~I~iSS~LSGTy~sA~~Aa~~~~~---~~I~V 147 (315)
T 3fys_A 77 LDWKSFYEEVKKHNELPTT-----SQPPIGELVALYEELGKS-YDAVISIHLSSGISGTFSSAAAADSMVDN---IDVYP 147 (315)
T ss_dssp BCHHHHHHHHHTTTCCCEE-----ECCCHHHHHHHHHHHTTT-CSEEEEEESCTTTCSHHHHHHHGGGGCSS---CEEEE
T ss_pred CCHHHHHHHHHhCCCCccc-----CCCCHHHHHHHHHHHHhc-CCcEEEEeCCCcHhHHHHHHHHHHHhCCC---CCEEE
Confidence 236788888874 35754 334444444444331100 111110 1122344455555555555566 89999
Q ss_pred eCcchHHHHHHHHHHHH--HHHhcCC-Chhhhc
Q 007499 327 VGAGSAGLGVLKMAVQA--AARMAGN-NDAFAR 356 (601)
Q Consensus 327 ~GAGsAg~GiA~ll~~~--~~~~~Gl-s~eeA~ 356 (601)
+=..+++.|.+-++..+ |. ++|. |.+|..
T Consensus 148 iDS~~~s~g~g~lv~~Aa~l~-~~G~~s~eeI~ 179 (315)
T 3fys_A 148 FDSEISCLAQGFYALKAAELI-KNGASSPEDII 179 (315)
T ss_dssp EECSSCHHHHHHHHHHHHHHH-HTTCCCHHHHH
T ss_pred ECCchhHHHHHHHHHHHHHHH-HcCCCCHHHHH
Confidence 99988888888777664 44 6899 888654
No 209
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=69.00 E-value=3.1 Score=41.73 Aligned_cols=32 Identities=16% Similarity=0.423 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||.|+|+|..|.++|..|... |. +++++|++
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 41 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRS 41 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 7999999999999999988753 43 57778874
No 210
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=68.89 E-value=2.8 Score=40.67 Aligned_cols=32 Identities=16% Similarity=0.205 Sum_probs=26.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.||+..|..|.. .|. ++.++|+.
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 39 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGM-----RQA-------SVKIIESL 39 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred ceEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcC
Confidence 589999999999999887754 343 68999986
No 211
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=68.77 E-value=5.4 Score=42.96 Aligned_cols=183 Identities=15% Similarity=0.188 Sum_probs=100.3
Q ss_pred ccccccCChhhHHHHHhcCCCCCeeEEEEec--------------------CccccccCCCCCccccccchhhhHHHh--
Q 007499 149 GMYFSAKDKGEMMSMIYNWPAQQVDMIVLTD--------------------GSRILGLGDLGVQGIGIPIGKLDVYVA-- 206 (601)
Q Consensus 149 Glyis~~d~g~i~~~l~nwp~~~v~viVVTD--------------------G~rILGLGDlG~~Gm~I~iGKl~LY~a-- 206 (601)
|.|++..|-..+.++|+.. .++++++.| |+.+=-+-++|..-.-|.++....+++
T Consensus 177 G~~~~~~D~~eik~lL~~~---Gi~v~~~~d~s~~ld~~~~~~~~~~~~~gg~~~~ei~~~~~A~~ni~~~~~~~~~A~~ 253 (458)
T 3pdi_B 177 SANLTPGDLEYIAESIESF---GLRPLLIPDLSGSLDGHLDENRFNALTTGGLSVAELATAGQSVATLVVGQSLAGAADA 253 (458)
T ss_dssp CTTCCHHHHHHHHHHHHTT---TCEEEEESCHHHHSSSCCCSSCCTTCCSCSBCHHHHGGGSSCSCEEEESGGGHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHc---CCEEEEecCccccccCccccccccccCCCCCCHHHHHhhhhCcEEEEecHHHHHHHHH
Confidence 7777777778888888864 688888854 445555555565555566666654432
Q ss_pred ---hcCCCCCceecEEeeccCCchhcccCccccccccCCCChhhhhHhHHHHHHHHHHhCCCeEEeeCCCChHHHHHHHH
Q 007499 207 ---AAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIFEDFQMKWAFETLERY 283 (601)
Q Consensus 207 ---~gGI~P~~~lPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P~~l~EDf~~~~Af~iL~ry 283 (601)
=-||. .+-+ |..+|+ +-.|+|+.++.+.+.. + .+ +.+++.
T Consensus 254 Le~~~GiP---~~~~--------------~~p~G~-----------~~T~~~l~~la~~~g~----~--~~---~~i~~e 296 (458)
T 3pdi_B 254 LAERTGVP---DRRF--------------GMLYGL-----------DAVDAWLMALAEISGN----P--VP---DRYKRQ 296 (458)
T ss_dssp HHHHSCCC---EEEE--------------CCSCHH-----------HHHHHHHHHHHHHHSS----C--CC---HHHHHH
T ss_pred HHHHHCCC---EEec--------------CCCcCH-----------HHHHHHHHHHHHHHCC----c--hH---HHHHHH
Confidence 13555 2211 112222 2367888888877642 1 11 234444
Q ss_pred hccCCccccCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEe
Q 007499 284 RKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD 363 (601)
Q Consensus 284 r~~~~~FnDDiQGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD 363 (601)
|.+ ++.++.-....|.. .|++|+|.+.-..++++.|. +.|+.. +.+.-
T Consensus 297 r~r------------------~~~~~~d~~~~l~G---krv~i~~~~~~~~~l~~~L~-----elGm~v------v~~~~ 344 (458)
T 3pdi_B 297 RAQ------------------LQDAMLDTHFMLSS---ARTAIAADPDLLLGFDALLR-----SMGAHT------VAAVV 344 (458)
T ss_dssp HHH------------------HHHHHHHHHHHHTT---CEEEEECCHHHHHHHHHHHH-----TTTCEE------EEEEE
T ss_pred HHH------------------HHHHHHHHHHhcCC---CEEEEECCcHHHHHHHHHHH-----HCCCEE------EEEEE
Confidence 433 12222222233445 99999999998899988884 356632 22221
Q ss_pred cCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeecC
Q 007499 364 KDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG 415 (601)
Q Consensus 364 ~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~ 415 (601)
.. ..+.+... +. .++. ..+...|++.++..+||.+||-|-
T Consensus 345 ~~-----~~~~~~~~--~~----~~v~-~~D~~~le~~i~~~~pDllig~~~ 384 (458)
T 3pdi_B 345 PA-----RAAALVDS--PL----PSVR-VGDLEDLEHAARAGQAQLVIGNSH 384 (458)
T ss_dssp SS-----CCSCCTTT--TS----SCEE-ESHHHHHHHHHHHHTCSEEEECTT
T ss_pred CC-----CChhhhhC--cc----CcEE-eCCHHHHHHHHHhcCCCEEEEChh
Confidence 11 11111111 00 0000 012234778899999999999663
No 212
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=68.73 E-value=3.3 Score=42.54 Aligned_cols=36 Identities=14% Similarity=0.161 Sum_probs=27.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|||+|||.||+..|..|.+.. ..| .+|.++|++-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~--~~g-------~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLV--GSK-------ADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHH--GGG-------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhC--CCC-------CeEEEEeCCC
Confidence 47999999999999999887621 123 3788888764
No 213
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=68.35 E-value=3 Score=43.01 Aligned_cols=36 Identities=25% Similarity=0.400 Sum_probs=28.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~ 37 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQ-----AKYP-----GRIALINDEKH 37 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEECCSSS
T ss_pred CCEEEEcChHHHHHHHHHHHh-----hCcC-----CCEEEEeCCCC
Confidence 689999999999999988865 3542 37999998753
No 214
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=68.28 E-value=1.7 Score=44.80 Aligned_cols=114 Identities=18% Similarity=0.270 Sum_probs=64.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCC-CCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
||.|+|||..|.++|..|+.. |+- +.+.++|.+-=..++. .+|.+.. .|....... ...+..++
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~~-----~el~l~D~~~~k~~g~a~DL~~~~-~~~~~~~~v----~~~~~~~a 66 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DVA-----KEVVMVDIKDGMPQGKALDMRESS-PIHGFDTRV----TGTNDYGP 66 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TCS-----SEEEEECSSTTHHHHHHHHHHHHH-HHHTCCCEE----EEESSSGG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CCC-----CEEEEEeCchHHHHHHHHHHhccc-cccCCCcEE----EECCCHHH
Confidence 799999999999999888753 431 4799999853111100 1222211 111111000 00134567
Q ss_pred hcccCCcEEEeecCC---CCC-------CC----HHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhc
Q 007499 402 VRKVKPHVLLGLSGV---GGV-------FN----EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFK 457 (601)
Q Consensus 402 V~~vkptvLIG~S~~---~g~-------Ft----~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~ 457 (601)
+++ .|++|=+.+. ||- .| +++++.+. ++++..+|+-.|||.. .+..-+++
T Consensus 67 ~~~--aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~-~~~p~a~vivvtNPvd---~~t~~~~k 130 (314)
T 3nep_X 67 TED--SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFV-EGSPDSTIIVVANPLD---VMTYVAYE 130 (314)
T ss_dssp GTT--CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHH-TTCTTCEEEECCSSHH---HHHHHHHH
T ss_pred hCC--CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHH-HhCCCcEEEecCCchh---HHHHHHHH
Confidence 777 7887644333 332 12 45666665 4899999999999985 44444554
No 215
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=68.12 E-value=2.7 Score=35.92 Aligned_cols=32 Identities=22% Similarity=0.448 Sum_probs=25.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|+|..|..+|+.+.. .|. +++++|++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~-----~g~-------~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHR-----MGH-------EVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 789999999999988887754 342 57888875
No 216
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=67.56 E-value=3.4 Score=43.51 Aligned_cols=36 Identities=17% Similarity=0.203 Sum_probs=27.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
.+|||+|||.||+..|..|.... .| .+|.++|+..-
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~---~g-------~~Vtvie~~~~ 39 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLD---PE-------AHVTMIDQASR 39 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHC---TT-------SEEEEECCC--
T ss_pred CcEEEECCCHHHHHHHHHHHhhC---cC-------CCEEEEECCCc
Confidence 78999999999999999887641 13 36888888654
No 217
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=67.30 E-value=3 Score=41.37 Aligned_cols=30 Identities=30% Similarity=0.564 Sum_probs=24.2
Q ss_pred EEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 324 IVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 324 iv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
|+|+|||.||+-.|..|.. .|+ ++.++|++
T Consensus 7 ViIVGaGpaGl~~A~~La~-----~G~-------~V~v~Er~ 36 (397)
T 3oz2_A 7 VLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKR 36 (397)
T ss_dssp EEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred EEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 8999999999999887764 465 47788864
No 218
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=67.05 E-value=4.1 Score=37.15 Aligned_cols=35 Identities=14% Similarity=0.297 Sum_probs=27.1
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 320 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 320 ~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+.+|+|+|+|..|..+|+.|... .| -+++++|++
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~----~g-------~~V~vid~~ 72 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRAR----YG-------KISLGIEIR 72 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHH----HC-------SCEEEEESC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhc----cC-------CeEEEEECC
Confidence 347999999999999999888642 14 268888874
No 219
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=66.92 E-value=2.5 Score=41.21 Aligned_cols=32 Identities=22% Similarity=0.279 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.||+..|..|.. .|+ ++.++|+.
T Consensus 23 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~vie~~ 54 (338)
T 3itj_A 23 NKVTIIGSGPAAHTAAIYLAR-----AEI-------KPILYEGM 54 (338)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 789999999999999988865 353 58889984
No 220
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=66.74 E-value=5.5 Score=40.35 Aligned_cols=33 Identities=15% Similarity=0.151 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||.|+|+|..|.++|..+... |. -+++++|++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 5899999999999999888753 41 268888876
No 221
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=66.73 E-value=7.2 Score=38.15 Aligned_cols=31 Identities=19% Similarity=0.303 Sum_probs=24.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
||.|+|+|..|..+|..|.. .|. +++++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~-----~g~-------~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMK-----HGY-------PLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 68999999999999988864 342 58888874
No 222
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=66.69 E-value=3.8 Score=36.83 Aligned_cols=32 Identities=34% Similarity=0.590 Sum_probs=26.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
-+++|+|+|.+|+-.|..+... | .++.++|+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g-------~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----G-------LKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCC
Confidence 4799999999999998887653 4 368899876
No 223
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=66.69 E-value=4.8 Score=41.66 Aligned_cols=32 Identities=28% Similarity=0.355 Sum_probs=27.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
..|||+|||.+|+.+|..|.+..- .++.++|+
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~-----------~~V~vlE~ 55 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSG-----------GSVLVVDA 55 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHC-----------SCEEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHhCCC-----------CcEEEEcc
Confidence 789999999999999998876430 26999998
No 224
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=66.49 E-value=4.3 Score=42.38 Aligned_cols=34 Identities=21% Similarity=0.328 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||||+|+|.||+..|..|... +-. -+|.++|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~~-----~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MPD-----LKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CTT-----CEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----CcC-----CeEEEEcCC
Confidence 5899999999999999988653 211 268888875
No 225
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=66.43 E-value=7.5 Score=39.45 Aligned_cols=58 Identities=24% Similarity=0.328 Sum_probs=36.6
Q ss_pred cCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 292 DDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 292 DDiQGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
++.++.....++..+.+++..+.+. . ++|+|+|||..|...+.+.. ..|. ++|+.+|+
T Consensus 155 s~~~aa~~~~~~ta~~~l~~~~~~~-g---~~VlV~GaG~vG~~aiqlak-----~~Ga------~~Vi~~~~ 212 (363)
T 3m6i_A 155 SYENGAMLEPLSVALAGLQRAGVRL-G---DPVLICGAGPIGLITMLCAK-----AAGA------CPLVITDI 212 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCCT-T---CCEEEECCSHHHHHHHHHHH-----HTTC------CSEEEEES
T ss_pred CHHHHHhhhHHHHHHHHHHHcCCCC-C---CEEEEECCCHHHHHHHHHHH-----HcCC------CEEEEECC
Confidence 4445554445666677777666544 3 68999999877655544333 2453 46888876
No 226
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=66.35 E-value=2.8 Score=42.47 Aligned_cols=110 Identities=15% Similarity=0.130 Sum_probs=62.4
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc---ccCCCCCCChhhhccccccCCCCCcccCCC
Q 007499 322 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL---ITKERKNLDPAAAPFAKDPGDFMGLREGAS 397 (601)
Q Consensus 322 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL---i~~~r~~l~~~k~~fa~~~~~~~~~~~~~~ 397 (601)
.||+|.|| |..|..++..|+. .|.-...-...++++|...- ......++.+...+|..+. ....+
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di------~~~~~ 73 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGL------EATDD 73 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEE------EEESC
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCe------EeccC
Confidence 58999997 9999988887654 34210000126999997420 0000001111111222111 12256
Q ss_pred HHHHhcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCC-CCCeEEecCCCC
Q 007499 398 LLEVVRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDS-VKPAIFAMSNPT 445 (601)
Q Consensus 398 L~e~V~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~~-erPIIFaLSNPt 445 (601)
+.+++++ +|++|=+.+.+.. .|.++++++.+ ++ ...+++-.|||.
T Consensus 74 ~~~a~~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~-~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 74 PKVAFKD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAE-VAKKDVKVLVVGNPA 133 (327)
T ss_dssp HHHHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HSCTTCEEEECSSSH
T ss_pred hHHHhCC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-hcCCCeEEEEeCCch
Confidence 8889886 8999876665432 34567778754 54 555788899996
No 227
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=65.98 E-value=3.8 Score=35.64 Aligned_cols=32 Identities=31% Similarity=0.634 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|+|..|..+|+.|.+ .|. +++++|++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~-----~g~-------~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTA-----AGK-------KVLAVDKS 38 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEECC
Confidence 689999999999999888865 343 68889874
No 228
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=65.94 E-value=3.5 Score=33.95 Aligned_cols=85 Identities=19% Similarity=0.155 Sum_probs=49.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccc-cCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKD-PGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~-~~~~~~~~~~~~L~e 400 (601)
.+|+|+|+|..|..+++.+.. .|. .+++++|++.- .+...+..-.+. ..+. .+..++.+
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~-----~g~------~~v~~~~r~~~------~~~~~~~~~~~~~~~d~---~~~~~~~~ 65 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKT-----SSN------YSVTVADHDLA------ALAVLNRMGVATKQVDA---KDEAGLAK 65 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----CSS------EEEEEEESCHH------HHHHHHTTTCEEEECCT---TCHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CCC------ceEEEEeCCHH------HHHHHHhCCCcEEEecC---CCHHHHHH
Confidence 799999999999888887764 341 36888887411 111111000000 0000 11235777
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhh
Q 007499 401 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRE 430 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~ 430 (601)
+++. +|++|=+. |..++..+++.+.+
T Consensus 66 ~~~~--~d~vi~~~--~~~~~~~~~~~~~~ 91 (118)
T 3ic5_A 66 ALGG--FDAVISAA--PFFLTPIIAKAAKA 91 (118)
T ss_dssp HTTT--CSEEEECS--CGGGHHHHHHHHHH
T ss_pred HHcC--CCEEEECC--CchhhHHHHHHHHH
Confidence 7764 89998655 45567888887754
No 229
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=65.75 E-value=4.5 Score=34.38 Aligned_cols=32 Identities=28% Similarity=0.522 Sum_probs=25.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~-----~g-------~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSE-----KG-------HDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 689999999999999887764 34 368889874
No 230
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=65.47 E-value=2.4 Score=43.78 Aligned_cols=115 Identities=16% Similarity=0.254 Sum_probs=67.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCC-CCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.||.|+|||..|..+|..|... |+- ..+.++|.+-=..++ ..+|.+. .+|....-. -..+..+
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~-----~~~-----~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~-----i~~~~~~ 69 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ-----GIT-----DELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVK-----TSYGTYE 69 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCE-----EEEECGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC-----ceEEEEecchHHHHHHHHHHHhc-cccccCCeE-----EEeCcHH
Confidence 6899999999999999888753 432 479999974100000 0023332 233311100 0111235
Q ss_pred HhcccCCcEEEeecCC---CCC-------CC----HHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007499 401 VVRKVKPHVLLGLSGV---GGV-------FN----EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 458 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~---~g~-------Ft----~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~w 458 (601)
++++ .|++|=+.+. +|- .+ +++++.+.+ ++..-+|+-.|||.. +..+-+++.
T Consensus 70 a~~~--aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~-~~p~a~vlvvtNPvd---~~t~~~~k~ 135 (326)
T 3pqe_A 70 DCKD--ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMA-SGFDGIFLVATNPVD---ILTYATWKF 135 (326)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-TTCCSEEEECSSSHH---HHHHHHHHH
T ss_pred HhCC--CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHH-hcCCeEEEEcCChHH---HHHHHHHHh
Confidence 6766 7887644333 332 12 566677754 889999999999985 455555554
No 231
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=65.39 E-value=3.8 Score=40.21 Aligned_cols=32 Identities=28% Similarity=0.459 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.||+..|..+.. .|. ++.++|+.
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 40 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGR-----AQL-------STLILEKG 40 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----cCC-------cEEEEeCC
Confidence 689999999999999887764 353 69999987
No 232
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=65.26 E-value=4 Score=41.65 Aligned_cols=34 Identities=26% Similarity=0.327 Sum_probs=27.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 321 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 321 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.-+|+|+|||.||+..|..|.. .|+ ++.++|+.-
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQ-----SGI-------DCDVYEAVK 56 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 3789999999999999988865 354 588888764
No 233
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=65.23 E-value=12 Score=38.46 Aligned_cols=109 Identities=17% Similarity=0.272 Sum_probs=58.2
Q ss_pred CcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCC
Q 007499 293 DIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER 372 (601)
Q Consensus 293 DiQGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r 372 (601)
+.++.....++..+.+++..+.+. . ++|+|+|||..|...+.+.. ..|. ++++.+|+.
T Consensus 159 ~~~aal~~~~~ta~~~l~~~~~~~-g---~~VlV~GaG~vG~~aiqlak-----~~Ga------~~Vi~~~~~------- 216 (370)
T 4ej6_A 159 PVHGAFCEPLACCLHGVDLSGIKA-G---STVAILGGGVIGLLTVQLAR-----LAGA------TTVILSTRQ------- 216 (370)
T ss_dssp TTGGGGHHHHHHHHHHHHHHTCCT-T---CEEEEECCSHHHHHHHHHHH-----HTTC------SEEEEECSC-------
T ss_pred HHHHhhhhHHHHHHHHHHhcCCCC-C---CEEEEECCCHHHHHHHHHHH-----HcCC------CEEEEECCC-------
Confidence 345544455666677777666544 4 69999999866655443332 2453 478877763
Q ss_pred CCCChhhhcccccc-CCCCCcccCCCHHHHhcc---c---CCcEEEeecCCCCCCCHHHHHHh
Q 007499 373 KNLDPAAAPFAKDP-GDFMGLREGASLLEVVRK---V---KPHVLLGLSGVGGVFNEEVLKAM 428 (601)
Q Consensus 373 ~~l~~~k~~fa~~~-~~~~~~~~~~~L~e~V~~---v---kptvLIG~S~~~g~Ft~evv~~M 428 (601)
+.+..+++.- .+..-.....++.+.++. . +.|++|=+++. +..-++.++.+
T Consensus 217 ----~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G~-~~~~~~~~~~l 274 (370)
T 4ej6_A 217 ----ATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGV-AETVKQSTRLA 274 (370)
T ss_dssp ----HHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSCC-HHHHHHHHHHE
T ss_pred ----HHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCCC-HHHHHHHHHHh
Confidence 3334444321 000000112456666654 1 57888877653 22234455555
No 234
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=65.21 E-value=3.7 Score=41.96 Aligned_cols=33 Identities=24% Similarity=0.560 Sum_probs=27.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.||+..|..|.. .|+ ++.++|+..
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDN 59 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 789999999999999887764 453 688999864
No 235
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=65.15 E-value=3.5 Score=43.28 Aligned_cols=35 Identities=31% Similarity=0.382 Sum_probs=27.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 368 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 368 (601)
.+|+|+|||.||+..|..|.+ .| .++.++++..-+
T Consensus 12 ~~v~IIGaG~aGl~aA~~L~~-----~g-------~~v~v~E~~~~~ 46 (489)
T 2jae_A 12 HSVVVLGGGPAGLCSAFELQK-----AG-------YKVTVLEARTRP 46 (489)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEeccCCC
Confidence 799999999999999988765 34 268888876443
No 236
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=65.13 E-value=3.6 Score=40.31 Aligned_cols=33 Identities=33% Similarity=0.576 Sum_probs=26.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
..|+|+|||.+|+..|..|.. .|+ ++.++|+..
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~-----~G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEECCC
Confidence 469999999999999988865 354 588888763
No 237
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=65.07 E-value=11 Score=34.41 Aligned_cols=50 Identities=14% Similarity=0.282 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 301 ALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 301 ~LAgll~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.++..+.+++....--.. ++++|.|| |..|..+++++.. .| -+++.+|++
T Consensus 22 ~~~ta~~~l~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~~~~-----~G-------~~V~~~~~~ 72 (198)
T 1pqw_A 22 AYLTAWHSLCEVGRLSPG---ERVLIHSATGGVGMAAVSIAKM-----IG-------ARIYTTAGS 72 (198)
T ss_dssp HHHHHHHHHHTTSCCCTT---CEEEETTTTSHHHHHHHHHHHH-----HT-------CEEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCC---CEEEEeeCCChHHHHHHHHHHH-----cC-------CEEEEEeCC
Confidence 445555566433332334 79999994 7777777665543 34 268888764
No 238
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=65.06 E-value=4 Score=41.37 Aligned_cols=34 Identities=29% Similarity=0.295 Sum_probs=27.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
.+|+|+|||.||+..|..|.. .|+ ++.++|+.-.
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~-----~G~-------~v~viE~~~~ 45 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQ-----NGW-------DVRLHEKSSE 45 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecCCC
Confidence 789999999999999888765 353 6888887643
No 239
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=65.05 E-value=3.7 Score=41.13 Aligned_cols=34 Identities=18% Similarity=0.323 Sum_probs=28.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
..|+|+|||.+|+.+|..|.+ .|+ ++.++|+...
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~-----~G~-------~V~llE~~~~ 51 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAK-----ENK-------NTALFESGTM 51 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSST
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCCC
Confidence 689999999999999998875 353 6999998643
No 240
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=64.87 E-value=4 Score=40.14 Aligned_cols=32 Identities=22% Similarity=0.519 Sum_probs=27.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
..|+|+|||.+|+.+|..|.+ .|. ++.++|+.
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~-----~G~-------~V~vlE~~ 36 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAA-----GGH-------EVLVAEAA 36 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 679999999999999988865 353 68999987
No 241
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=64.49 E-value=4.7 Score=35.81 Aligned_cols=33 Identities=12% Similarity=0.231 Sum_probs=26.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 321 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 321 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
+.+|+|+|+|..|..++++|.. .| .++.++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~-----~g-------~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQ-----RG-------QNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 4789999999999999988865 34 368899985
No 242
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=64.46 E-value=4.3 Score=35.68 Aligned_cols=32 Identities=13% Similarity=0.251 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|+|..|..+|+.|.. .| -+++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~-----~g-------~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLA-----SD-------IPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 589999999999999998875 34 368999984
No 243
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=64.43 E-value=5.7 Score=40.64 Aligned_cols=87 Identities=15% Similarity=0.186 Sum_probs=51.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
.+|.|+|+|..|..+|..|.. .|. +++++|++.- .. ...++... . ...++.|+
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~-----~G~-------~V~~~~~~~~---------~~-~~~a~~~G-~----~~~~~~e~ 69 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKD-----SGV-------DVTVGLRSGS---------AT-VAKAEAHG-L----KVADVKTA 69 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECCTTC---------HH-HHHHHHTT-C----EEECHHHH
T ss_pred CEEEEECchHHHHHHHHHHHH-----CcC-------EEEEEECChH---------HH-HHHHHHCC-C----EEccHHHH
Confidence 789999999999999988765 343 5777776421 10 11121110 0 11268888
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHH-HhhhcCCCCCeEE
Q 007499 402 VRKVKPHVLLGLSGVGGVFNEEVLK-AMRESDSVKPAIF 439 (601)
Q Consensus 402 V~~vkptvLIG~S~~~g~Ft~evv~-~Ma~~~~erPIIF 439 (601)
++. +|++| ++..+.. .+++++ .++....+..+|.
T Consensus 70 ~~~--aDvVi-lavp~~~-~~~v~~~~i~~~l~~~~ivi 104 (338)
T 1np3_A 70 VAA--ADVVM-ILTPDEF-QGRLYKEEIEPNLKKGATLA 104 (338)
T ss_dssp HHT--CSEEE-ECSCHHH-HHHHHHHHTGGGCCTTCEEE
T ss_pred Hhc--CCEEE-EeCCcHH-HHHHHHHHHHhhCCCCCEEE
Confidence 876 78877 4443333 378887 6643233344444
No 244
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=64.34 E-value=3.7 Score=39.53 Aligned_cols=32 Identities=28% Similarity=0.493 Sum_probs=25.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEE-EecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFL-LDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~l-vD~~ 365 (601)
.+|+|+|||.||+..|..|... |. ++.+ +|+.
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 6899999999999999888653 43 4566 8873
No 245
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=64.30 E-value=9.8 Score=38.62 Aligned_cols=49 Identities=29% Similarity=0.439 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 301 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 301 ~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
.++..+.|++..+.+. . ++|+|+|||+.|...+.+.. ..|. ++++.+|+
T Consensus 156 ~~~ta~~al~~~~~~~-g---~~VlV~GaG~vG~~aiqlak-----~~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 156 PLSVGIHACRRGGVTL-G---HKVLVCGAGPIGMVTLLVAK-----AMGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHTCCT-T---CEEEEECCSHHHHHHHHHHH-----HTTC------SEEEEEES
T ss_pred hHHHHHHHHHhcCCCC-C---CEEEEECCCHHHHHHHHHHH-----HcCC------CEEEEECC
Confidence 4455566666655443 3 69999999877665544433 2353 47888876
No 246
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=64.26 E-value=3.9 Score=41.01 Aligned_cols=34 Identities=26% Similarity=0.443 Sum_probs=27.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
-.|+|+|||.||+..|..|.. .|+ ++.++|++-.
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~-----~G~-------~V~l~E~~~~ 38 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKRPE 38 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCCC
Confidence 679999999999999988765 353 5888888753
No 247
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=64.22 E-value=4.3 Score=41.45 Aligned_cols=115 Identities=17% Similarity=0.242 Sum_probs=66.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCC-CCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
||.|+|||..|..+|-+|.. .|+- ..+.|+|..-=...+- -||++.. .|....... ...+-.++
T Consensus 2 KV~IiGaG~VG~~~a~~l~~-----~~~~-----~el~L~Di~~~~~~G~a~DL~h~~-~~~~~~~~i----~~~~d~~~ 66 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLL-----NLDV-----DEIALVDIAEDLAVGEAMDLAHAA-AGIDKYPKI----VGGADYSL 66 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----HSCC-----SEEEEECSSHHHHHHHHHHHHHHH-GGGTCCCEE----EEESCGGG
T ss_pred EEEEECcCHHHHHHHHHHHh-----CCCC-----CEEEEEeCCCCcchhhhhhhhccc-ccCCCCCeE----ecCCCHHH
Confidence 79999999999888887764 2432 4699999752111111 1344322 221111110 01112345
Q ss_pred hcccCCcEEEeecCCC---CC-----C--C----HHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007499 402 VRKVKPHVLLGLSGVG---GV-----F--N----EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 458 (601)
Q Consensus 402 V~~vkptvLIG~S~~~---g~-----F--t----~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~w 458 (601)
+++ .|++|=+.+.| |- | + +++++.++ +++...||+-.|||.. .+..-+++.
T Consensus 67 ~~~--aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~-~~~p~aivlvvsNPvd---~~t~i~~k~ 131 (294)
T 2x0j_A 67 LKG--SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIV-ENAPESKILVVTNPMD---VMTYIMWKE 131 (294)
T ss_dssp GTT--CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHH-TTSTTCEEEECSSSHH---HHHHHHHHH
T ss_pred hCC--CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHH-hcCCceEEEEecCcch---hhHHhhHHH
Confidence 666 78887555543 42 1 1 35666665 4899999999999985 455555553
No 248
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=64.14 E-value=4.2 Score=39.81 Aligned_cols=32 Identities=38% Similarity=0.593 Sum_probs=26.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|+|.||+..|..+.+ .|+ ++.++|+.
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 48 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAAR-----SGF-------SVAILDKA 48 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CcEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCC
Confidence 689999999999999988764 353 68999985
No 249
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=64.07 E-value=3.9 Score=40.93 Aligned_cols=35 Identities=31% Similarity=0.372 Sum_probs=28.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 368 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 368 (601)
..|+|+|||.+|+.+|..|.+ .|. ++.++|+....
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~-----~G~-------~V~vie~~~~~ 38 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAK-----QGV-------KTLLVDAFDPP 38 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCCCC
Confidence 579999999999999998865 353 69999987543
No 250
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=64.01 E-value=12 Score=37.43 Aligned_cols=49 Identities=22% Similarity=0.280 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 301 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 301 ~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
.....+.+++..+.+. . ++++|+|||+.|.-.+.++..+ .| .+++.+|+
T Consensus 148 ~~~ta~~~l~~~~~~~-g---~~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~ 196 (348)
T 4eez_A 148 AGVTTYKAIKVSGVKP-G---DWQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDI 196 (348)
T ss_dssp HHHHHHHHHHHHTCCT-T---CEEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEES
T ss_pred ceeeEEeeecccCCCC-C---CEEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEEC
Confidence 3444567788777654 3 6999999998885444333322 23 47888887
No 251
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=63.98 E-value=4.8 Score=41.86 Aligned_cols=39 Identities=26% Similarity=0.411 Sum_probs=29.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
.+|||+|||.||+..|..|.+... ..+ . -++.++|+..-
T Consensus 31 ~dVvIIGaG~aGl~aA~~L~~~g~-~~~-----~-~~v~liE~~~~ 69 (463)
T 3s5w_A 31 HDLIGVGFGPSNIALAIALQERAQ-AQG-----A-LEVLFLDKQGD 69 (463)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHHH-HHC-----C-CCEEEEESCSS
T ss_pred CCEEEECCCHHHHHHHHHHHhccc-ccC-----c-ccEEEEecCCC
Confidence 479999999999999999987643 100 0 36899998753
No 252
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=63.71 E-value=3.8 Score=41.09 Aligned_cols=33 Identities=24% Similarity=0.471 Sum_probs=27.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
..|+|+|||.+|+.+|..|.+ .|. ++.++|+..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~-----~G~-------~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAK-----RGE-------EVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 679999999999999998875 353 599999874
No 253
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=63.05 E-value=4.2 Score=42.03 Aligned_cols=32 Identities=22% Similarity=0.380 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||.|+|||..|.|||..++.+ |+ ++.++|.+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~~ 38 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 6899999999999999888764 54 58888853
No 254
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=62.92 E-value=4.5 Score=41.35 Aligned_cols=33 Identities=33% Similarity=0.521 Sum_probs=26.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
-+|+|+|||.||+..|..|.++ |. ++.+++++.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~-----G~-------~V~vlE~~~ 34 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA-----GK-------KVLLLEGGE 34 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHc-----CC-------eEEEEecCC
Confidence 3699999999999999988753 53 588888753
No 255
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=62.91 E-value=4.7 Score=43.00 Aligned_cols=34 Identities=26% Similarity=0.409 Sum_probs=27.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 321 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 321 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
..+|+|+|+|.||+..|..|... |. ++.++|+..
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~~ 155 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRYD 155 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeccC
Confidence 37899999999999999998753 43 588998853
No 256
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=62.86 E-value=23 Score=38.69 Aligned_cols=122 Identities=24% Similarity=0.224 Sum_probs=74.9
Q ss_pred CCccccCc---chhHHHHHHHHHHHHHHh---------CC------CCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhc
Q 007499 287 FCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMA 348 (601)
Q Consensus 287 ~~~FnDDi---QGTaav~LAgll~Alr~~---------g~------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~ 348 (601)
+.+.|--- ..+|=-+++.+|+..|.. |+ .-.+|.+.++.|+|.|..|..+|+.+...
T Consensus 90 i~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~----- 164 (529)
T 1ygy_A 90 VLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAF----- 164 (529)
T ss_dssp CEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHTT-----
T ss_pred eEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHhC-----
Confidence 55555322 234555788888877631 10 01245559999999999999999887643
Q ss_pred CCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEeec----CCCCCCCHHH
Q 007499 349 GNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNEEV 424 (601)
Q Consensus 349 Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft~ev 424 (601)
|+ +++.+|+.- +..+ +.... . ...++.|+++. .|+++=+- ...+.++++.
T Consensus 165 G~-------~V~~~d~~~---------~~~~---a~~~g----~-~~~~l~e~~~~--aDvV~l~~P~~~~t~~~i~~~~ 218 (529)
T 1ygy_A 165 GA-------YVVAYDPYV---------SPAR---AAQLG----I-ELLSLDDLLAR--ADFISVHLPKTPETAGLIDKEA 218 (529)
T ss_dssp TC-------EEEEECTTS---------CHHH---HHHHT----C-EECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHH
T ss_pred CC-------EEEEECCCC---------ChhH---HHhcC----c-EEcCHHHHHhc--CCEEEECCCCchHHHHHhCHHH
Confidence 43 688888741 1111 11100 0 11369999987 78877442 2346788878
Q ss_pred HHHhhhcCCCCCeEEecCC
Q 007499 425 LKAMRESDSVKPAIFAMSN 443 (601)
Q Consensus 425 v~~Ma~~~~erPIIFaLSN 443 (601)
+..|. +..+|.=.|.
T Consensus 219 ~~~~k----~g~ilin~ar 233 (529)
T 1ygy_A 219 LAKTK----PGVIIVNAAR 233 (529)
T ss_dssp HTTSC----TTEEEEECSC
T ss_pred HhCCC----CCCEEEECCC
Confidence 87773 4678887774
No 257
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=62.84 E-value=4.9 Score=41.60 Aligned_cols=37 Identities=14% Similarity=0.373 Sum_probs=29.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 368 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 368 (601)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~-----~g~~-----~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRA-----EGFE-----GRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHc-----cCcC-----CeEEEEECCCCC
Confidence 589999999999999988865 3542 369999986543
No 258
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=62.73 E-value=5 Score=41.00 Aligned_cols=33 Identities=27% Similarity=0.391 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.||+..|..|.. .|+ ++.++|+.-
T Consensus 6 ~~V~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 38 (397)
T 2vou_A 6 DRIAVVGGSISGLTAALMLRD-----AGV-------DVDVYERSP 38 (397)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 789999999999999988765 354 577888753
No 259
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=62.63 E-value=4.5 Score=40.42 Aligned_cols=33 Identities=9% Similarity=0.183 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.||+..|..+.. .|+ ++.++|+..
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 47 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGM-----NNI-------SCRIIESMP 47 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 789999999999999887754 353 689999864
No 260
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=62.58 E-value=5.4 Score=39.92 Aligned_cols=33 Identities=27% Similarity=0.530 Sum_probs=27.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
..|+|+|||.+|+.+|..|.+ .| .++.++|+..
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~-----~G-------~~V~vle~~~ 39 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILAR-----KG-------YSVHILARDL 39 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeccC
Confidence 689999999999999998854 35 3799999864
No 261
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=62.57 E-value=5.4 Score=41.36 Aligned_cols=37 Identities=24% Similarity=0.326 Sum_probs=29.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 368 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 368 (601)
.+|||+|||.||+..|..|.+. |.+ .+|.++|+..-+
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~-----g~~-----~~V~lie~~~~~ 44 (408)
T 2gqw_A 8 APVVVLGAGLASVSFVAELRQA-----GYQ-----GLITVVGDEAER 44 (408)
T ss_dssp SSEEEECCSHHHHHHHHHHHHH-----TCC-----SCEEEEESSCSC
T ss_pred CcEEEECChHHHHHHHHHHHcc-----CCC-----CeEEEEECCCCC
Confidence 6799999999999999988753 432 369999987543
No 262
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=62.34 E-value=4.5 Score=41.72 Aligned_cols=36 Identities=22% Similarity=0.410 Sum_probs=28.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 10 ~~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~ 45 (415)
T 3lxd_A 10 ADVVIVGAGHGGAQAAIALRQ-----NGFE-----GRVLVIGREPE 45 (415)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEEESSSS
T ss_pred CcEEEECChHHHHHHHHHHHc-----cCcC-----CCEEEEecCCC
Confidence 789999999999999998865 3542 36999998643
No 263
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=62.31 E-value=4.1 Score=40.61 Aligned_cols=35 Identities=23% Similarity=0.357 Sum_probs=28.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 368 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 368 (601)
..|+|+|||.+|+.+|..|.+ .|+ ++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~-----~G~-------~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATR-----AGL-------NVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHH-----TTC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecCCCC
Confidence 579999999999999988875 353 69999987543
No 264
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=62.10 E-value=5.8 Score=41.43 Aligned_cols=36 Identities=17% Similarity=0.321 Sum_probs=27.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 321 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 321 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
..+|||+|||.||+..|..|.... .| .+|.++|+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~---~~-------~~V~vie~~~ 38 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLK---PE-------WDVKVFEATE 38 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC---TT-------SEEEEECSSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHhC---cC-------CCEEEEECCC
Confidence 378999999999999998886541 12 3678887764
No 265
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=62.05 E-value=4.8 Score=41.30 Aligned_cols=34 Identities=35% Similarity=0.470 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.||+..|..|.. .|+ +++.++|+..
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~-----~G~------~~v~v~E~~~ 38 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQ-----AGI------GKVTLLESSS 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCC
Confidence 689999999999999988765 454 2377888754
No 266
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=61.86 E-value=4.5 Score=41.10 Aligned_cols=33 Identities=12% Similarity=0.345 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.||+..|..|.. .|+ ++.++|+..
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~-----~G~-------~V~viE~~~ 39 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGR-----QGH-------RVVVVEQAR 39 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCC
Confidence 689999999999999988765 354 588888754
No 267
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=61.81 E-value=4.7 Score=40.58 Aligned_cols=35 Identities=23% Similarity=0.385 Sum_probs=28.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
..|+|+|||.+|+.+|..|.+. .|. .++.++|+..
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~----~G~------~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKN----HGI------TNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH----HCC------CCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHh----cCC------CcEEEEeCCC
Confidence 6899999999999999988761 241 2699999875
No 268
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=61.56 E-value=3.9 Score=41.61 Aligned_cols=33 Identities=27% Similarity=0.475 Sum_probs=26.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.||+..|-.|.+ .|+ ++.++|++-
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 589999999999999987754 454 588999873
No 269
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=61.45 E-value=4.8 Score=40.75 Aligned_cols=35 Identities=26% Similarity=0.564 Sum_probs=28.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 368 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 368 (601)
..|+|+|||.+|+.+|..|.+ .|. ++.++|+....
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~-----~G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAE-----RGH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCCCC
Confidence 579999999999999988875 353 69999987654
No 270
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=60.84 E-value=5.9 Score=40.26 Aligned_cols=34 Identities=35% Similarity=0.402 Sum_probs=25.5
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
+|+|+|||.||+..|-.|... .-|+ ++.++|+.-
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~---~~G~-------~V~v~E~~~ 35 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQA---RPLW-------AIDIVEKND 35 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHH---CTTS-------EEEEECSSC
T ss_pred eEEEECCCHHHHHHHHHHHhc---CCCC-------CEEEEECCC
Confidence 699999999999999887653 0143 577787653
No 271
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=60.77 E-value=5.2 Score=39.79 Aligned_cols=32 Identities=28% Similarity=0.652 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5799999999999999988753 43 68899874
No 272
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=60.26 E-value=6 Score=42.96 Aligned_cols=36 Identities=22% Similarity=0.370 Sum_probs=28.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
.+|||+|||.||+..|..|... ..| -+|.++|+..-
T Consensus 37 ~~VvIIGgG~AGl~aA~~L~~~---~~g-------~~V~vie~~~~ 72 (588)
T 3ics_A 37 RKIVVVGGVAGGASVAARLRRL---SEE-------DEIIMVERGEY 72 (588)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---CSS-------SEEEEECSSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhh---CcC-------CCEEEEECCCC
Confidence 7899999999999999888764 113 37899998754
No 273
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=60.16 E-value=7.6 Score=38.65 Aligned_cols=37 Identities=19% Similarity=0.193 Sum_probs=27.0
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhh-cCeEEEEecCc
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFA-RNKFFLLDKDG 366 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA-~~~i~lvD~~G 366 (601)
.|+|+|||.+|+.+|-.|.+.. .+. . ..++.++|+.-
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G-----~~~--~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERY-----HSV--LQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHH-----TTT--SSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhc-----ccc--CCCceEEEEECCC
Confidence 5899999999999998887643 000 0 03799999873
No 274
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=59.87 E-value=5.8 Score=41.65 Aligned_cols=32 Identities=25% Similarity=0.535 Sum_probs=26.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 36 (467)
T 1zk7_A 5 VQVAVIGSGGAAMAAALKAVE-----QG-------AQVTLIERG 36 (467)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 689999999999999977754 34 379999987
No 275
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=59.79 E-value=7.1 Score=40.06 Aligned_cols=38 Identities=16% Similarity=0.284 Sum_probs=27.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||-+|+..|..|.++.. +.+- ..++.++++.
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~-~~~~-----~~~V~vlEa~ 43 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIK-EKNL-----PLELTLVEAS 43 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHT-TTTC-----SEEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhcc-ccCC-----CCCEEEEECC
Confidence 689999999999999999988651 0010 1267777775
No 276
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=59.73 E-value=4.2 Score=39.83 Aligned_cols=31 Identities=26% Similarity=0.375 Sum_probs=25.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
.+|+|+|||.||+..|..|.. .|+ ++.++|+
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~lie~ 39 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAAR-----AEL-------KPLLFEG 39 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEec
Confidence 689999999999999988865 353 5888987
No 277
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=59.69 E-value=3 Score=45.99 Aligned_cols=33 Identities=24% Similarity=0.464 Sum_probs=29.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 33 ~~VlvvG~GGlGseiak~La~a-----GV------g~itlvD~D 65 (531)
T 1tt5_A 33 AHVCLINATATGTEILKNLVLP-----GI------GSFTIIDGN 65 (531)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECCC
T ss_pred CeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 9999999999999999988865 44 689999986
No 278
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=59.64 E-value=5.6 Score=40.24 Aligned_cols=33 Identities=24% Similarity=0.505 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.||+..|..|... |+ ++.++|+..
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 5799999999999999887653 53 578888754
No 279
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=59.61 E-value=5 Score=42.53 Aligned_cols=38 Identities=24% Similarity=0.462 Sum_probs=28.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.||+..|..|.+.. ..|++. .++.++|+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~--~~G~~~----~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQ--EKGAEI----PELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH--HTTCCC----CEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhhh--hcCCCC----CcEEEEEcC
Confidence 58999999999999999987632 145421 138899886
No 280
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=59.57 E-value=7.6 Score=41.25 Aligned_cols=36 Identities=33% Similarity=0.531 Sum_probs=28.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|||+|||.||+..|..+.+... . ..++.++|+..
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~--~-------~~~V~lie~~~ 71 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYG--D-------ANEIVVFDQNS 71 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHG--G-------GSEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCC--C-------CCeEEEEECCC
Confidence 789999999999999999877530 0 14789999864
No 281
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=59.56 E-value=5.5 Score=38.59 Aligned_cols=33 Identities=27% Similarity=0.455 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|+|.||+..|..+.. .|. .++.++|++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-----GGV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-----CCC------CcEEEEcCC
Confidence 479999999999999988764 353 168999985
No 282
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=59.45 E-value=5.3 Score=42.35 Aligned_cols=37 Identities=22% Similarity=0.319 Sum_probs=27.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
.+|||+|||.||+..|-.|..... .|+ +|.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G~-------~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DRI-------DVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GGS-------EEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEEecCCC
Confidence 479999999999999998876431 343 6889988643
No 283
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=59.11 E-value=6.7 Score=40.37 Aligned_cols=35 Identities=31% Similarity=0.506 Sum_probs=27.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
..|+|+|||.+|+.+|..|.+. .-|+ ++.++|+..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~---~pG~-------~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQL---APGR-------SLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhc---CCCC-------eEEEEeCCC
Confidence 5799999999999999888753 0143 689999863
No 284
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=59.10 E-value=6.1 Score=42.01 Aligned_cols=38 Identities=16% Similarity=0.124 Sum_probs=28.4
Q ss_pred CceEEEeCcchHHHHHHHHHHH-HHHH-hcCCChhhhcCeEEEEecC
Q 007499 321 DQKIVVVGAGSAGLGVLKMAVQ-AAAR-MAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 321 ~~riv~~GAGsAg~GiA~ll~~-~~~~-~~Gls~eeA~~~i~lvD~~ 365 (601)
..+|+|+|||.||+..|..|.. .... ..| -+|.++|+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g-------~~V~lie~~ 42 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLD-------MAVDMLEML 42 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCC-------EEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCC-------CeEEEEecC
Confidence 3789999999999999999876 4210 002 369999986
No 285
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=59.00 E-value=5.3 Score=42.00 Aligned_cols=34 Identities=29% Similarity=0.433 Sum_probs=26.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
||||+|+|.||+..|..+.+. |.+ -+|.++|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~~-----~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DKE-----SDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CSS-----SCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CCC-----CcEEEEeCCC
Confidence 799999999999999877543 432 3689998753
No 286
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=58.95 E-value=3.4 Score=44.59 Aligned_cols=32 Identities=13% Similarity=0.296 Sum_probs=24.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||||+|+|.||+..|+.|.. .+ -+|.++|++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 589999999999988766532 12 279999985
No 287
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=58.71 E-value=18 Score=38.74 Aligned_cols=32 Identities=31% Similarity=0.395 Sum_probs=26.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||.|+|+|..|..+|..+... | -+++++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-----G-------~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-----G-------ANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhc-----C-------CEEEEEECC
Confidence 5899999999999999888753 4 268888875
No 288
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=58.67 E-value=6 Score=40.71 Aligned_cols=36 Identities=22% Similarity=0.325 Sum_probs=28.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 368 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 368 (601)
..|||+|||.+|+..|-.|.+ .|. +++.++|+....
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~-----~G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLAR-----RGY------TNVTVLDPYPVP 42 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----cCC------CcEEEEeCCCCC
Confidence 579999999999999988765 454 269999987654
No 289
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=58.66 E-value=8.4 Score=38.82 Aligned_cols=54 Identities=19% Similarity=0.326 Sum_probs=32.1
Q ss_pred chhHHHHHHHHHHHHH-HhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 295 QGTAGVALAGLLGTVR-AQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 295 QGTaav~LAgll~Alr-~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
++.....++..+.+++ ..+. .. ++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 143 ~aa~~~~~~ta~~~l~~~~~~--~g---~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~ 197 (343)
T 2dq4_A 143 VAAILEPFGNAVHTVYAGSGV--SG---KSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDP 197 (343)
T ss_dssp HHTTHHHHHHHHHHHHSTTCC--TT---SCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECS
T ss_pred HHHhhhHHHHHHHHHHHhCCC--CC---CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 3333334444556665 3333 55 899999998777655544332 353 36888876
No 290
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=58.63 E-value=6.3 Score=41.29 Aligned_cols=36 Identities=28% Similarity=0.402 Sum_probs=28.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
.+|||+|||.||+..|..|.+. ..| .+|.++|+.--
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~---~~g-------~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKK---YPQ-------AEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---CSS-------SEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhh---CcC-------CcEEEEECCCC
Confidence 5899999999999999988763 113 37999988653
No 291
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=58.61 E-value=19 Score=36.01 Aligned_cols=55 Identities=18% Similarity=0.266 Sum_probs=31.7
Q ss_pred chhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 295 QGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 295 QGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
++...-.++..+.+.+..+.. .. ++++|.|||+.|...+.++ . ..|. +.++.+|+
T Consensus 139 ~aa~l~~~~~~~~~~~~~~~~-~g---~~VlV~GaG~vG~~aiq~a-k----~~G~------~~vi~~~~ 193 (346)
T 4a2c_A 139 DGAFIEPITVGLHAFHLAQGC-EN---KNVIIIGAGTIGLLAIQCA-V----ALGA------KSVTAIDI 193 (346)
T ss_dssp GGGGHHHHHHHHHHHHHTTCC-TT---SEEEEECCSHHHHHHHHHH-H----HTTC------SEEEEEES
T ss_pred HHHhchHHHHHHHHHHHhccC-CC---CEEEEECCCCcchHHHHHH-H----HcCC------cEEEEEec
Confidence 443333344445555555554 34 7999999998775444333 2 2343 46777776
No 292
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=58.17 E-value=6.1 Score=37.56 Aligned_cols=32 Identities=28% Similarity=0.391 Sum_probs=26.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
-.|+|+|+|.+|+..|..+.. .| .++.++++.
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~-----~g-------~~v~lie~~ 35 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQ-----KG-------VRVGLLTQS 35 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CC-------CCEEEEecC
Confidence 679999999999999988765 34 368889885
No 293
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=57.98 E-value=6.3 Score=43.04 Aligned_cols=34 Identities=29% Similarity=0.327 Sum_probs=28.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
.+|||+|||.||+..|..|.+ .|+ +|.++|+..-
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~~ 43 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGED 43 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 789999999999999998864 353 5999998743
No 294
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=57.87 E-value=6.5 Score=40.01 Aligned_cols=32 Identities=31% Similarity=0.406 Sum_probs=26.0
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
+|+|+|||.+|+..|..|.+ .| .++.++++..
T Consensus 2 dVvVIGaGiaGLsaA~~La~-----~G-------~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSK-----AG-------HEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHH-----TT-------CEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHh-----CC-------CceEEEeCCC
Confidence 69999999999999988875 34 3688888763
No 295
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=57.70 E-value=6.9 Score=41.53 Aligned_cols=36 Identities=19% Similarity=0.406 Sum_probs=27.5
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 318 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 318 dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
++..+||+|+|.|.+|+++|++|.+. | -++...|.+
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~-----G-------~~V~~~D~~ 41 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKL-----G-------AIVTVNDGK 41 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHT-----T-------CEEEEEESS
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhC-----C-------CEEEEEeCC
Confidence 34559999999999999998888753 4 256777763
No 296
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=57.65 E-value=6.4 Score=43.57 Aligned_cols=34 Identities=18% Similarity=0.352 Sum_probs=27.8
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 320 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 320 ~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+.+|+|+|||.||+..|-.|.. .|+ ++.++|+.
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar-----~G~-------~V~LiEr~ 55 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHK-----LGH-------DVTIYERS 55 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHc-----CCC-------CEEEEcCC
Confidence 34899999999999999987754 353 68899987
No 297
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=57.49 E-value=3.6 Score=46.91 Aligned_cols=35 Identities=31% Similarity=0.525 Sum_probs=30.0
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 320 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 320 ~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d 444 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 444 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCC
Confidence 349999999999999999988765 54 689999987
No 298
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=57.47 E-value=6.6 Score=40.25 Aligned_cols=33 Identities=33% Similarity=0.564 Sum_probs=26.3
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
+|+|+|||.+|+..|..|.+ .| .++.++++..-
T Consensus 2 dVvVIGaGiaGLsaA~~La~-----~G-------~~V~vlE~~~~ 34 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLAR-----NG-------HEIIVLEKSAM 34 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCCC
Confidence 69999999999999988865 34 36888887643
No 299
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=57.40 E-value=5.9 Score=41.34 Aligned_cols=32 Identities=28% Similarity=0.356 Sum_probs=26.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.||+..|-.|.. .|+ ++.++|++
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~-----~G~-------~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQ-----HDV-------DVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------eEEEEcCC
Confidence 579999999999999888765 353 68888875
No 300
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=57.32 E-value=6.8 Score=42.01 Aligned_cols=36 Identities=14% Similarity=0.351 Sum_probs=27.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
.+|||+|||.||+..|..|.... .| -+|.++|+..-
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~---~~-------~~V~lie~~~~ 37 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLS---ET-------AEIIMFERGEY 37 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC---SS-------SEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhhC---cC-------CCEEEEECCCC
Confidence 48999999999999998886531 12 37899998744
No 301
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=57.18 E-value=6.2 Score=40.95 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=27.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|||+|||.||+..|..|... ..| -+|.++|+.-
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~---~~g-------~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL---MPD-------LKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH---CTT-------CEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcC---CCC-------CeEEEECCCC
Confidence 6899999999999999988762 123 3788888864
No 302
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=57.18 E-value=4.4 Score=39.36 Aligned_cols=32 Identities=25% Similarity=0.385 Sum_probs=25.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 37 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAAR-----ANL-------QPVLITGM 37 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CCEEECCS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEccC
Confidence 689999999999999988764 353 57788854
No 303
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=56.84 E-value=7.4 Score=40.76 Aligned_cols=32 Identities=28% Similarity=0.422 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 7 ~dvvIIGaG~aGl~aA~~l~~~-----g~-------~V~liE~~ 38 (470)
T 1dxl_A 7 NDVVIIGGGPGGYVAAIKAAQL-----GF-------KTTCIEKR 38 (470)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 6799999999999999877653 43 69999987
No 304
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=56.56 E-value=6.1 Score=46.96 Aligned_cols=37 Identities=16% Similarity=0.393 Sum_probs=31.7
Q ss_pred CCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 315 SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 315 ~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
+|+. .||+|+|+|..|.-||+.|+.+++ ++|.++|.+
T Consensus 24 rL~~---s~VlIvG~GGlGseiak~La~aGV-----------g~itlvD~D 60 (1015)
T 3cmm_A 24 KMQT---SNVLILGLKGLGVEIAKNVVLAGV-----------KSMTVFDPE 60 (1015)
T ss_dssp HHTT---CEEEEECCSHHHHHHHHHHHHHCC-----------SEEEEECCS
T ss_pred HHhc---CEEEEECCChHHHHHHHHHHHcCC-----------CeEEEecCC
Confidence 3455 999999999999999999987644 689999987
No 305
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=56.55 E-value=7.2 Score=41.44 Aligned_cols=36 Identities=28% Similarity=0.489 Sum_probs=27.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|||+|||.||+..|..+.+.- ..|. ++.++|+..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~--~~G~-------~V~liE~~~ 38 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSH--PETT-------QVTVIDCDG 38 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC--TTTE-------EEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--CCcC-------EEEEEeCCC
Confidence 57999999999999999887630 0042 799999874
No 306
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=56.45 E-value=7.8 Score=40.52 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=27.3
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
+|||+|||.||+..|..+.+.. .| .++.++|+..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADH---PD-------ADVTAYEMND 35 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCC
Confidence 6999999999999999887641 13 4799999864
No 307
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=56.38 E-value=25 Score=34.73 Aligned_cols=21 Identities=29% Similarity=0.509 Sum_probs=17.3
Q ss_pred ceEEEeCcchHHHHHHHHHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQ 342 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~ 342 (601)
.||+++|+|..|.-+++.+.+
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~ 24 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEE 24 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHH
T ss_pred eEEEEECcCHHHHHHHHHHHh
Confidence 689999999998877776654
No 308
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=56.34 E-value=9.7 Score=37.83 Aligned_cols=34 Identities=24% Similarity=0.484 Sum_probs=27.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.-|+|+|||.||+..|..|.+. +.|+ ++.++|+.
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~---r~G~-------~V~viEk~ 99 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKN---RPDL-------KVCIIESS 99 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHh---CCCC-------eEEEEECC
Confidence 6699999999999999888653 3464 58889875
No 309
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=56.24 E-value=7.6 Score=41.14 Aligned_cols=36 Identities=19% Similarity=0.381 Sum_probs=28.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
.+|||+|||.||+..|..+.+.. .| .++.++|+...
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~ 72 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRND---EN-------ANVVTLEKGEI 72 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEECSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCC
Confidence 57999999999999999886531 13 37999998644
No 310
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=56.19 E-value=6.3 Score=42.68 Aligned_cols=37 Identities=27% Similarity=0.382 Sum_probs=28.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
.+|||+|||.||...|..|..... .|+ +|.++|+.-.
T Consensus 26 ~dVvIVGgG~aGl~aA~~La~~~~--~G~-------~V~liE~~~~ 62 (550)
T 2e4g_A 26 DKILIVGGGTAGWMAASYLGKALQ--GTA-------DITLLQAPDI 62 (550)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTT--TSS-------EEEEEECCCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhcC--CCC-------cEEEEeCCCC
Confidence 679999999999999988876320 343 7999998643
No 311
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=56.13 E-value=6.5 Score=40.96 Aligned_cols=36 Identities=22% Similarity=0.466 Sum_probs=27.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|||+|||.||+..|..|...+. .| -+|.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~--~g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALG--SG-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHG--GG-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCC--Cc-------CEEEEEeCCC
Confidence 689999999999999999877331 23 3688888754
No 312
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=56.10 E-value=6.5 Score=38.35 Aligned_cols=31 Identities=29% Similarity=0.532 Sum_probs=24.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
-|+|+|||+||+-.|..+.. .|+ ++.++|+.
T Consensus 8 DvvIIG~GpAGl~aA~~l~~-----~g~-------~V~liE~~ 38 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASR-----ANL-------KTVMIERG 38 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 47999999999998876653 453 58889874
No 313
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=56.07 E-value=8.1 Score=39.02 Aligned_cols=48 Identities=23% Similarity=0.376 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 301 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 301 ~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
.++..+.|++..+. .. ++|+|+|||..|..++.+... .|. ++++.+|+
T Consensus 153 ~~~ta~~~l~~~~~--~g---~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~ 200 (348)
T 2d8a_A 153 PLGNAVDTVLAGPI--SG---KSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEP 200 (348)
T ss_dssp HHHHHHHHHTTSCC--TT---CCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECS
T ss_pred HHHHHHHHHHhcCC--CC---CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 34444556643332 55 899999998777666554432 353 36887776
No 314
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=56.03 E-value=6.5 Score=41.67 Aligned_cols=33 Identities=27% Similarity=0.445 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
-+|+|+|||.||+..|..+.+ .| .++.++|++.
T Consensus 26 ~dVvVIGgG~aGl~aA~~la~-----~G-------~~V~liEk~~ 58 (491)
T 3urh_A 26 YDLIVIGSGPGGYVCAIKAAQ-----LG-------MKVAVVEKRS 58 (491)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCC
Confidence 579999999999999988764 35 3699999754
No 315
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=55.95 E-value=8.2 Score=40.28 Aligned_cols=34 Identities=15% Similarity=0.338 Sum_probs=27.0
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
+|||+|||.||+..|..+.+.. .| .++.++|+..
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLH---PD-------AEIQWYEKGD 35 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC---TT-------SEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHHhC---cC-------CeEEEEECCC
Confidence 6999999999999999887631 13 3789999864
No 316
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=55.91 E-value=6.4 Score=43.02 Aligned_cols=34 Identities=29% Similarity=0.313 Sum_probs=28.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
.+|||+|||.||+..|..|.+ .|+ +|.++|+..-
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~~ 55 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAASG 55 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 789999999999999988864 353 6999998643
No 317
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=55.55 E-value=4.6 Score=40.19 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=26.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.+|+.+|..|.+.. ..|+ ++.++|+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~--~~G~-------~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT--SGPL-------YLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC---CCE-------EEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc--cCCc-------eEEEEECC
Confidence 47999999999999998886410 0343 68889876
No 318
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=55.48 E-value=6.4 Score=42.01 Aligned_cols=33 Identities=24% Similarity=0.539 Sum_probs=27.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
-.|+|+|||.+|+++|..+.. .|+ ++.++|+..
T Consensus 4 ~DVvIIGgGi~G~~~A~~La~-----~G~-------~V~llE~~~ 36 (501)
T 2qcu_A 4 KDLIVIGGGINGAGIAADAAG-----RGL-------SVLMLEAQD 36 (501)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEECCC
Confidence 579999999999999998865 354 588999864
No 319
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=55.42 E-value=11 Score=40.32 Aligned_cols=35 Identities=14% Similarity=0.388 Sum_probs=28.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|||+|||.||+..|..|... ..| .+|.++|+..
T Consensus 12 ~~vvIIGgG~AGl~aA~~L~~~---~~g-------~~V~lie~~~ 46 (493)
T 1m6i_A 12 VPFLLIGGGTAAFAAARSIRAR---DPG-------ARVLIVSEDP 46 (493)
T ss_dssp EEEEEESCSHHHHHHHHHHHHH---STT-------CEEEEEESSS
T ss_pred CCEEEECChHHHHHHHHHHHhc---CCC-------CeEEEEeCCC
Confidence 7899999999999999988653 112 4799999874
No 320
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=55.25 E-value=8.3 Score=43.11 Aligned_cols=33 Identities=27% Similarity=0.461 Sum_probs=27.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|||+|+|.||+..|..+... |. ++.++|+..
T Consensus 392 ~~VvIIGgG~AGl~aA~~La~~-----G~-------~V~liE~~~ 424 (690)
T 3k30_A 392 ARVLVVGAGPSGLEAARALGVR-----GY-------DVVLAEAGR 424 (690)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCC
Confidence 6899999999999999988753 43 699999863
No 321
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=54.70 E-value=7.8 Score=36.67 Aligned_cols=33 Identities=18% Similarity=0.274 Sum_probs=26.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 321 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 321 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
..||.|+|+|..|..+|..+... | -+++++|++
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~-----g-------~~V~~~~~~ 51 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIA-----G-------HEVTYYGSK 51 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEcCC
Confidence 38999999999999999888653 4 268888764
No 322
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=54.61 E-value=7.1 Score=41.06 Aligned_cols=33 Identities=27% Similarity=0.415 Sum_probs=27.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 7 ~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~liE~~~ 39 (474)
T 1zmd_A 7 ADVTVIGSGPGGYVAAIKAAQ-----LGF-------KTVCIEKNE 39 (474)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCC
Confidence 579999999999999988765 343 699999874
No 323
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=54.56 E-value=6 Score=39.14 Aligned_cols=32 Identities=22% Similarity=0.413 Sum_probs=25.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.||+..|..+.. .|+ ++.++|+.
T Consensus 15 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 46 (335)
T 2a87_A 15 RDVIVIGSGPAGYTAALYAAR-----AQL-------APLVFEGT 46 (335)
T ss_dssp EEEEEECCHHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEecC
Confidence 789999999999999988764 353 57888864
No 324
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=54.47 E-value=8.1 Score=39.08 Aligned_cols=49 Identities=18% Similarity=0.318 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 301 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 301 ~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
.++..+.|++..+.+. . ++|+|+|||..|...+.+.. ..|. ++|+.+|+
T Consensus 151 ~~~ta~~al~~~~~~~-g---~~VlV~GaG~vG~~a~qla~-----~~Ga------~~Vi~~~~ 199 (352)
T 3fpc_A 151 MMTTGFHGAELANIKL-G---DTVCVIGIGPVGLMSVAGAN-----HLGA------GRIFAVGS 199 (352)
T ss_dssp HHHHHHHHHHHTTCCT-T---CCEEEECCSHHHHHHHHHHH-----TTTC------SSEEEECC
T ss_pred hhHHHHHHHHhcCCCC-C---CEEEEECCCHHHHHHHHHHH-----HcCC------cEEEEECC
Confidence 4445566676655443 4 68999999876655443332 2453 46888876
No 325
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=54.44 E-value=9.9 Score=39.51 Aligned_cols=35 Identities=29% Similarity=0.395 Sum_probs=27.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||-+|+..|..|.+. |- ..++.++++..
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~-----g~-----~~~v~v~E~~~ 39 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERA-----FP-----DLNITLLEAGE 39 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHH-----CT-----TSEEEEECSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHh-----CC-----CCCEEEEECCC
Confidence 7899999999999999988764 31 03688888753
No 326
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=54.34 E-value=6.6 Score=41.40 Aligned_cols=34 Identities=29% Similarity=0.537 Sum_probs=27.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
.+|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 28 ~dViIIGgG~AGl~aA~~La~-----~G~-------~V~llEk~~~ 61 (417)
T 3v76_A 28 QDVVIIGAGAAGMMCAIEAGK-----RGR-------RVLVIDHARA 61 (417)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCCC
Confidence 579999999999999877764 353 6999998654
No 327
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=54.33 E-value=7.9 Score=37.76 Aligned_cols=40 Identities=18% Similarity=0.115 Sum_probs=23.3
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 318 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 318 dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
+|.+.+++|.||.+. -||...|+..+. +.| -+++++|++-
T Consensus 23 ~l~~k~vlVTGasg~-~GIG~~ia~~l~-~~G-------~~V~~~~r~~ 62 (280)
T 3nrc_A 23 FLAGKKILITGLLSN-KSIAYGIAKAMH-REG-------AELAFTYVGQ 62 (280)
T ss_dssp TTTTCEEEECCCCST-TCHHHHHHHHHH-HTT-------CEEEEEECTT
T ss_pred ccCCCEEEEECCCCC-CCHHHHHHHHHH-HcC-------CEEEEeeCch
Confidence 345599999998431 123333444444 345 2689998864
No 328
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=54.20 E-value=7.4 Score=40.72 Aligned_cols=33 Identities=30% Similarity=0.429 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
-+|+|+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQ-----LGM-------KVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 479999999999999977754 343 699999873
No 329
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=54.20 E-value=6.9 Score=41.44 Aligned_cols=33 Identities=27% Similarity=0.500 Sum_probs=27.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.||+..|..+.. .| .++.++|+.-
T Consensus 12 ~dVvVIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 44 (479)
T 2hqm_A 12 YDYLVIGGGSGGVASARRAAS-----YG-------AKTLLVEAKA 44 (479)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TS-------CCEEEEESSC
T ss_pred CCEEEEcCCHHHHHHHHHHHH-----CC-------CcEEEEeCCC
Confidence 689999999999999988765 34 3699999863
No 330
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=54.14 E-value=7.1 Score=41.92 Aligned_cols=36 Identities=28% Similarity=0.442 Sum_probs=27.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|||+|||.||+..|-.|..... .|+ +|.++|+.-
T Consensus 6 ~dVvIVGgG~aGl~aA~~La~~~~--~G~-------~V~liE~~~ 41 (538)
T 2aqj_A 6 KNIVIVGGGTAGWMAASYLVRALQ--QQA-------NITLIESAA 41 (538)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCC--SSC-------EEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEECCCC
Confidence 689999999999999988865210 353 699999853
No 331
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=54.13 E-value=3.5 Score=42.88 Aligned_cols=116 Identities=14% Similarity=0.108 Sum_probs=67.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCC-CCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.||.|+|||..|.++|..+... |+- ..+.++|.+-=..++ ..+|.+. ..|.... .. ....++.+
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~-----g~~-----~ev~L~Di~~~~~~g~a~DL~~~-~~~~~~~-~i---~~t~d~~~ 86 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMK-----DLA-----DEVALVDVMEDKLKGEMMDLEHG-SLFLHTA-KI---VSGKDYSV 86 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHH-----CCC-----SEEEEECSCHHHHHHHHHHHHHH-GGGSCCS-EE---EEESSSCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEECCHHHHHHHHHHhhhh-hhcccCC-eE---EEcCCHHH
Confidence 6999999999999999888753 441 379999973100000 0123322 1232211 00 01234443
Q ss_pred HhcccCCcEEE---eecCCCCC-----C------CHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhccc
Q 007499 401 VVRKVKPHVLL---GLSGVGGV-----F------NEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA 459 (601)
Q Consensus 401 ~V~~vkptvLI---G~S~~~g~-----F------t~evv~~Ma~~~~erPIIFaLSNPt~~aE~tpeda~~wt 459 (601)
+++ .|++| |....+|- | -+++++.+.+ +++.-+|+-.|||.. ....-+++.+
T Consensus 87 -~~d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k-~~P~a~ilvvtNPvd---i~t~~~~k~s 152 (330)
T 3ldh_A 87 -SAG--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVK-HSPDCLKELHPELGT---DKNKQDWKLS 152 (330)
T ss_dssp -CSS--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHH-HCTTCEEEECSSSHH---HHHHHHHHHH
T ss_pred -hCC--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHh-hCCCceEEeCCCccH---HHHHHHHHHh
Confidence 666 78887 33333331 1 2456667754 799999999999985 5555666654
No 332
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=53.88 E-value=7.5 Score=40.83 Aligned_cols=33 Identities=33% Similarity=0.443 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 3 ~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~lie~~~ 35 (468)
T 2qae_A 3 YDVVVIGGGPGGYVASIKAAQ-----LGM-------KTACVEKRG 35 (468)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 689999999999999977654 353 699999873
No 333
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=53.85 E-value=6.7 Score=37.96 Aligned_cols=32 Identities=22% Similarity=0.407 Sum_probs=24.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.||+..|..+.. .|+ ++.+++++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR-----KGI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 579999999999999887754 353 57777653
No 334
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=53.80 E-value=7.3 Score=41.89 Aligned_cols=33 Identities=18% Similarity=0.253 Sum_probs=27.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 44 ~dVvIIGgG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 76 (523)
T 1mo9_A 44 YDAIFIGGGAAGRFGSAYLRAM-----G-------GRQLIVDRWP 76 (523)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCCC
Confidence 6899999999999999888653 4 3699999875
No 335
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=53.76 E-value=8 Score=40.83 Aligned_cols=32 Identities=28% Similarity=0.568 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.||+..|..+.. .| .++.++|+.
T Consensus 5 ~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (463)
T 2r9z_A 5 FDLIAIGGGSGGLAVAEKAAA-----FG-------KRVALIESK 36 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CC-------CcEEEEcCC
Confidence 689999999999999988765 34 369999986
No 336
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=53.73 E-value=8.9 Score=40.00 Aligned_cols=35 Identities=29% Similarity=0.533 Sum_probs=27.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.||+..|..|.. .|.. .++.++|+..
T Consensus 7 ~dV~IIGaG~aGl~aA~~L~~-----~G~~-----~~V~v~E~~~ 41 (447)
T 2gv8_A 7 RKIAIIGAGPSGLVTAKALLA-----EKAF-----DQVTLFERRG 41 (447)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TTCC-----SEEEEECSSS
T ss_pred CEEEEECccHHHHHHHHHHHh-----cCCC-----CCeEEEecCC
Confidence 789999999999999988764 4542 2689999863
No 337
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=53.30 E-value=16 Score=37.42 Aligned_cols=105 Identities=23% Similarity=0.360 Sum_probs=61.9
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCC-CCCChhhhccccccCCCCCcccCCCHHH
Q 007499 323 KIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 323 riv~~G-AGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
||.|+| +|..|..+|.+|... +++- ..+.|+|..-. ..+. .+|.+. ++ +. ...+. ...+..+
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~----~~~~-----~el~L~Di~~~-~~G~a~Dl~~~--~~--~~-~v~~~-~~~~~~~ 65 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQ----LPSG-----SELSLYDIAPV-TPGVAVDLSHI--PT--AV-KIKGF-SGEDATP 65 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH----SCTT-----EEEEEECSSTT-HHHHHHHHHTS--CS--SE-EEEEE-CSSCCHH
T ss_pred EEEEECCCCHHHHHHHHHHHhC----CCCC-----ceEEEEecCCC-chhHHHHhhCC--CC--Cc-eEEEe-cCCCcHH
Confidence 799999 799999998777542 2432 47999999741 1110 112211 11 00 00000 0124677
Q ss_pred HhcccCCcEEEeecCCC---CC-----C--C----HHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 401 VVRKVKPHVLLGLSGVG---GV-----F--N----EEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~---g~-----F--t----~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
+.++ .|+.|=+.+.| |- | | +++++.+.+ ++..-+|+-.|||..
T Consensus 66 ~~~~--aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~-~~p~a~vlvvtNPvd 122 (312)
T 3hhp_A 66 ALEG--ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAK-TCPKACIGIITNPVN 122 (312)
T ss_dssp HHTT--CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTSEEEECSSCHH
T ss_pred HhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCcEEEEecCcch
Confidence 8888 79887554433 31 1 2 455666654 788889999999985
No 338
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=53.24 E-value=6.6 Score=42.72 Aligned_cols=35 Identities=31% Similarity=0.512 Sum_probs=20.1
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 319 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 319 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
+.+.+++|.|||.+|.++|..+ . +.|. +|+++++.
T Consensus 362 l~~k~vlV~GaGGig~aia~~L----~-~~G~-------~V~i~~R~ 396 (523)
T 2o7s_A 362 LASKTVVVIGAGGAGKALAYGA----K-EKGA-------KVVIANRT 396 (523)
T ss_dssp ----CEEEECCSHHHHHHHHHH----H-HHCC--------CEEEESS
T ss_pred cCCCEEEEECCcHHHHHHHHHH----H-HCCC-------EEEEEECC
Confidence 3348999999985555555444 4 3452 58888874
No 339
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=53.22 E-value=8.6 Score=41.24 Aligned_cols=35 Identities=31% Similarity=0.412 Sum_probs=28.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 368 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 368 (601)
.+|+|+|||.||+..|..+.. .|+ ++.++|+..-+
T Consensus 93 ~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liEk~~~~ 127 (497)
T 2bry_A 93 TKCLVVGAGPCGLRAAVELAL-----LGA-------RVVLVEKRIKF 127 (497)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCSSC
T ss_pred CCEEEECccHHHHHHHHHHHH-----CCC-------eEEEEEecccc
Confidence 789999999999999888764 353 68899986443
No 340
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=53.13 E-value=6.9 Score=40.92 Aligned_cols=32 Identities=34% Similarity=0.492 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQ-----LGQ-------KVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 569999999999999977764 343 69999986
No 341
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=52.94 E-value=24 Score=34.70 Aligned_cols=95 Identities=19% Similarity=0.217 Sum_probs=54.4
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCC
Q 007499 319 FADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 397 (601)
Q Consensus 319 l~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~ 397 (601)
+...+|+|.|| |-.|..+++.|++ .|. +++.+|+.. ....+ .+..- ++ .+..+
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~-----~G~-------~V~~~~r~~----~~~~~-----~~~~~--Dl---~d~~~ 70 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRT-----QGR-------TVRGFDLRP----SGTGG-----EEVVG--SL---EDGQA 70 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHH-----TTC-------CEEEEESSC----CSSCC-----SEEES--CT---TCHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----CCC-------EEEEEeCCC----CCCCc-----cEEec--Cc---CCHHH
Confidence 44499999998 7777777776654 352 688888752 11111 12111 00 12245
Q ss_pred HHHHhcccCCcEEEeecCCCCCC--------------CHHHHHHhhhcCCCCCeEEecC
Q 007499 398 LLEVVRKVKPHVLLGLSGVGGVF--------------NEEVLKAMRESDSVKPAIFAMS 442 (601)
Q Consensus 398 L~e~V~~vkptvLIG~S~~~g~F--------------t~evv~~Ma~~~~erPIIFaLS 442 (601)
+.++++ ++|++|=+.+....- |..+++++.+ ..-+.|||.=|
T Consensus 71 ~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~~~~~V~~SS 126 (347)
T 4id9_A 71 LSDAIM--GVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASA-AGVRRFVFASS 126 (347)
T ss_dssp HHHHHT--TCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHH-TTCSEEEEEEE
T ss_pred HHHHHh--CCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEECC
Confidence 788887 489999776643221 2457888754 55567888655
No 342
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=52.91 E-value=6.7 Score=41.14 Aligned_cols=32 Identities=28% Similarity=0.374 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~ 35 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQ-----LGL-------STAIVEPK 35 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 679999999999999977654 353 68999986
No 343
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=52.88 E-value=20 Score=36.56 Aligned_cols=47 Identities=23% Similarity=0.350 Sum_probs=30.1
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 303 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 303 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
...+.+++..+..... ++|+|+|||..|..++.+... .| -+++.+|+
T Consensus 173 ~ta~~al~~~~~~~~g---~~VlV~GaG~vG~~~~q~a~~-----~G-------a~Vi~~~~ 219 (366)
T 1yqd_A 173 ITVYSPLKYFGLDEPG---KHIGIVGLGGLGHVAVKFAKA-----FG-------SKVTVIST 219 (366)
T ss_dssp HHHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEES
T ss_pred HHHHHHHHhcCcCCCC---CEEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeC
Confidence 3445667666554345 899999998777666554432 34 26887775
No 344
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=52.77 E-value=7.8 Score=41.88 Aligned_cols=34 Identities=29% Similarity=0.447 Sum_probs=27.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
.+|+|+|||.||+..|..|.+ .|+ ++.++|+..-
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~~ 50 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRE-----LGR-------SVHVIETAGD 50 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 689999999999999988875 354 5889998643
No 345
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=52.50 E-value=18 Score=36.48 Aligned_cols=54 Identities=24% Similarity=0.306 Sum_probs=31.6
Q ss_pred chhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 295 QGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 295 QGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
++.....++..+.|++..+.+. . ++|+|+|||..|...+.+.. ..|. +++.+|+
T Consensus 147 ~aa~~~~~~ta~~al~~~~~~~-g---~~VlV~GaG~vG~~a~qla~-----~~Ga-------~Vi~~~~ 200 (352)
T 1e3j_A 147 EGALLEPLSVGVHACRRAGVQL-G---TTVLVIGAGPIGLVSVLAAK-----AYGA-------FVVCTAR 200 (352)
T ss_dssp HHHTHHHHHHHHHHHHHHTCCT-T---CEEEEECCSHHHHHHHHHHH-----HTTC-------EEEEEES
T ss_pred HHHhhchHHHHHHHHHhcCCCC-C---CEEEEECCCHHHHHHHHHHH-----HcCC-------EEEEEcC
Confidence 4433334455566676655443 4 69999999866655544333 2342 4887775
No 346
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=52.38 E-value=8.2 Score=40.71 Aligned_cols=33 Identities=24% Similarity=0.418 Sum_probs=27.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 7 ~dvvIIG~G~aG~~aA~~l~~-----~g-------~~V~lie~~~ 39 (464)
T 2eq6_A 7 YDLIVIGTGPGGYHAAIRAAQ-----LG-------LKVLAVEAGE 39 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 689999999999999988854 34 3699999863
No 347
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=52.37 E-value=8.9 Score=35.55 Aligned_cols=95 Identities=15% Similarity=0.212 Sum_probs=52.9
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChh-----hhccccccCCCCCcccC
Q 007499 322 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPA-----AAPFAKDPGDFMGLREG 395 (601)
Q Consensus 322 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~-----k~~fa~~~~~~~~~~~~ 395 (601)
.+|+|.|| |-.|..+++.|++ +.| -++++++++.- ..+... +..+..- ++ .+.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~----~~g-------~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~--D~---~d~ 64 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLT----YTD-------MHITLYGRQLK-----TRIPPEIIDHERVTVIEG--SF---QNP 64 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHH----HCC-------CEEEEEESSHH-----HHSCHHHHTSTTEEEEEC--CT---TCH
T ss_pred EEEEEEeCCcHHHHHHHHHHHh----cCC-------ceEEEEecCcc-----ccchhhccCCCceEEEEC--CC---CCH
Confidence 45999996 7777777777762 244 26888887521 011111 1111110 10 123
Q ss_pred CCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEe
Q 007499 396 ASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFA 440 (601)
Q Consensus 396 ~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFa 440 (601)
.++.++++. +|++|=+.+..+.-++.+++.|.+ ..-+-|||.
T Consensus 65 ~~~~~~~~~--~d~vv~~ag~~n~~~~~~~~~~~~-~~~~~iv~i 106 (221)
T 3r6d_A 65 GXLEQAVTN--AEVVFVGAMESGSDMASIVKALSR-XNIRRVIGV 106 (221)
T ss_dssp HHHHHHHTT--CSEEEESCCCCHHHHHHHHHHHHH-TTCCEEEEE
T ss_pred HHHHHHHcC--CCEEEEcCCCCChhHHHHHHHHHh-cCCCeEEEE
Confidence 457888875 799997765432226778888854 333345553
No 348
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=52.23 E-value=9.1 Score=40.01 Aligned_cols=36 Identities=25% Similarity=0.364 Sum_probs=28.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
.+|||+|||.||+..|..+.+ .|.+ .+|.++|+..-
T Consensus 5 ~~vvIIGgG~aGl~aA~~l~~-----~g~~-----~~V~lie~~~~ 40 (431)
T 1q1r_A 5 DNVVIVGTGLAGVEVAFGLRA-----SGWE-----GNIRLVGDATV 40 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSCCS
T ss_pred CcEEEEcCHHHHHHHHHHHHc-----cCcC-----CCEEEEECCCC
Confidence 689999999999999988764 3542 37999997643
No 349
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=52.11 E-value=7.1 Score=40.99 Aligned_cols=32 Identities=25% Similarity=0.500 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (450)
T 1ges_A 5 YDYIAIGGGSGGIASINRAAM-----YG-------QKCALIEAK 36 (450)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEcCC
Confidence 689999999999999988764 34 369999986
No 350
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=51.95 E-value=15 Score=35.80 Aligned_cols=87 Identities=16% Similarity=0.271 Sum_probs=51.6
Q ss_pred CceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHH
Q 007499 321 DQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 399 (601)
Q Consensus 321 ~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~ 399 (601)
..+|+|.|| |-.|..+++.|++ .|. +++.+++. ..-++. +..++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~-------~v~~~~r~-----~~~D~~-----------------d~~~~~ 48 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGD-------VELVLRTR-----DELNLL-----------------DSRAVH 48 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CTT-------EEEECCCT-----TTCCTT-----------------CHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEecC-----ccCCcc-----------------CHHHHH
Confidence 378999996 6666666665543 342 46666543 001111 123577
Q ss_pred HHhcccCCcEEEeecCCCCC-----------------CCHHHHHHhhhcCCCCCeEEecC
Q 007499 400 EVVRKVKPHVLLGLSGVGGV-----------------FNEEVLKAMRESDSVKPAIFAMS 442 (601)
Q Consensus 400 e~V~~vkptvLIG~S~~~g~-----------------Ft~evv~~Ma~~~~erPIIFaLS 442 (601)
++++.+++|++|=+.+..+. .+..+++++.+ ..-+.+||.=|
T Consensus 49 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~SS 107 (321)
T 1e6u_A 49 DFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQ-NDVNKLLFLGS 107 (321)
T ss_dssp HHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCEEEEECC
T ss_pred HHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEEcc
Confidence 88886679999988775431 13456666643 44456777544
No 351
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=51.69 E-value=9.2 Score=40.20 Aligned_cols=33 Identities=30% Similarity=0.465 Sum_probs=27.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.||+..|..+.+ .|+ ++.++|+..
T Consensus 6 ~dVvIIGgG~aGl~aA~~l~~-----~G~-------~V~liE~~~ 38 (478)
T 1v59_A 6 HDVVIIGGGPAGYVAAIKAAQ-----LGF-------NTACVEKRG 38 (478)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecCC
Confidence 579999999999999988765 353 699999853
No 352
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=51.54 E-value=34 Score=33.26 Aligned_cols=94 Identities=19% Similarity=0.329 Sum_probs=54.4
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.+|+|.|| |-.|..+++.|++ .| -+++.+++. .+...+. ...+..- + .. ..++.+
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~----~~~~~~~--~~~~~~~--D---l~-~~~~~~ 58 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKN-----DG-------NTPIILTRS----IGNKAIN--DYEYRVS--D---YT-LEDLIN 58 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESC----CC-------CCEEEEC--C---CC-HHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCC----CCcccCC--ceEEEEc--c---cc-HHHHHH
Confidence 68999996 7777777766654 34 268888886 1111122 1122111 1 11 245777
Q ss_pred HhcccCCcEEEeecCCCCC------------CCHHHHHHhhhcCCCCCeEEecC
Q 007499 401 VVRKVKPHVLLGLSGVGGV------------FNEEVLKAMRESDSVKPAIFAMS 442 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~g~------------Ft~evv~~Ma~~~~erPIIFaLS 442 (601)
+++ ++|++|=+.+..+. -+..+++++.+ ..-+-+||.=|
T Consensus 59 ~~~--~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~-~~~~r~v~~SS 109 (311)
T 3m2p_A 59 QLN--DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYE-NNISNIVYAST 109 (311)
T ss_dssp HTT--TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHH-TTCCEEEEEEE
T ss_pred hhc--CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHH-cCCCEEEEEcc
Confidence 887 59999987765332 14677888754 44455887543
No 353
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=51.44 E-value=16 Score=39.95 Aligned_cols=97 Identities=9% Similarity=0.212 Sum_probs=55.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCCh-hhhccccccCCCCCcccCCC---
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP-AAAPFAKDPGDFMGLREGAS--- 397 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~-~k~~fa~~~~~~~~~~~~~~--- 397 (601)
.||||+|||+.|-++|.+|++- .++.. .+|.+.|++-.. .++.+ ....+..-. . ...+
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~----~dv~~----~~I~vaD~~~~~----~~~~~~~g~~~~~~~--V----dadnv~~ 75 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEK----FDIKP----SQVTIIAAEGTK----VDVAQQYGVSFKLQQ--I----TPQNYLE 75 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH----BCCCG----GGEEEEESSCCS----CCHHHHHTCEEEECC--C----CTTTHHH
T ss_pred CCEEEECcCHHHHHHHHHHHhC----CCCce----eEEEEeccchhh----hhHHhhcCCceeEEe--c----cchhHHH
Confidence 6899999999999999999773 44422 368888875211 11111 111221110 0 1122
Q ss_pred -HHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 007499 398 -LLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 443 (601)
Q Consensus 398 -L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN 443 (601)
|..+|+. +|++|=+| +..++.+++++-.+ ..=-.+-++|
T Consensus 76 ~l~aLl~~--~DvVIN~s--~~~~~l~Im~acle---aGv~YlDTa~ 115 (480)
T 2ph5_A 76 VIGSTLEE--NDFLIDVS--IGISSLALIILCNQ---KGALYINAAT 115 (480)
T ss_dssp HTGGGCCT--TCEEEECC--SSSCHHHHHHHHHH---HTCEEEESSC
T ss_pred HHHHHhcC--CCEEEECC--ccccCHHHHHHHHH---cCCCEEECCC
Confidence 2335554 49999655 56677788877644 2234555665
No 354
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=51.41 E-value=6.8 Score=38.48 Aligned_cols=35 Identities=20% Similarity=0.360 Sum_probs=27.9
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 319 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 319 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
|.+.++||+|+|..|..-+++|+.+ | -++.+++.+
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~-----G-------A~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQE-----G-------AAITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGG-----C-------CCEEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEECCC
Confidence 4459999999999999988888764 3 368888864
No 355
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=51.36 E-value=9.4 Score=38.46 Aligned_cols=101 Identities=19% Similarity=0.287 Sum_probs=54.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhh-ccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAA-PFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~-~fa~~~~~~~~~~~~~~L~e 400 (601)
.||.|+|+|+.|..+|..|..+ | .+++++|+..--. +.+...-. .|- +...+ +..-..++.|
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~~~~~---~~l~~~g~~~~~-~~~~~-~~~~~~~~~~ 77 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARRKEIV---DLINVSHTSPYV-EESKI-TVRATNDLEE 77 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSHHHH---HHHHHHSCBTTB-TTCCC-CSEEESCGGG
T ss_pred CcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCCHHHH---HHHHHhCCcccC-CCCee-eEEEeCCHHH
Confidence 8999999999999999988753 4 3688888742100 00100000 000 00000 0001234555
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 007499 401 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMN 447 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~ 447 (601)
++. .|++| ++. +....+++++.++ . +..+|..++|..+.
T Consensus 78 -~~~--aDvVi-l~v-k~~~~~~v~~~l~--~-~~~~vv~~~nGi~~ 116 (335)
T 1z82_A 78 -IKK--EDILV-IAI-PVQYIREHLLRLP--V-KPSMVLNLSKGIEI 116 (335)
T ss_dssp -CCT--TEEEE-ECS-CGGGHHHHHTTCS--S-CCSEEEECCCCCCT
T ss_pred -hcC--CCEEE-EEC-CHHHHHHHHHHhC--c-CCCEEEEEeCCCCC
Confidence 544 67655 332 2356677777763 2 45578888886553
No 356
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=51.08 E-value=9 Score=40.34 Aligned_cols=34 Identities=29% Similarity=0.385 Sum_probs=27.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
-.|+|+|||.||+..|..+.+ .|+ ++.++|+++-
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~-----~G~-------~V~liEk~~~ 38 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAK-----AKY-------NVLMADPKGE 38 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECTTSS
T ss_pred ceEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEECCCC
Confidence 579999999999999988754 353 6999996553
No 357
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=51.01 E-value=19 Score=35.91 Aligned_cols=52 Identities=10% Similarity=-0.031 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 299 GVALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 299 av~LAgll~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+.++..+.+++....--.. ++++|.|| |..|..+++++.. .| -+++.+|++
T Consensus 127 ~~~~~ta~~~l~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~a~~-----~G-------~~Vi~~~~~ 179 (333)
T 1wly_A 127 MLKGMTAQYLLHQTHKVKPG---DYVLIHAAAGGMGHIMVPWARH-----LG-------ATVIGTVST 179 (333)
T ss_dssp HHHHHHHHHHHHTTSCCCTT---CEEEETTTTSTTHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred hhhHHHHHHHHHHhhCCCCC---CEEEEECCccHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 33445556666533333345 89999996 8777777666543 34 268888874
No 358
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=50.95 E-value=8 Score=41.51 Aligned_cols=23 Identities=26% Similarity=0.361 Sum_probs=19.5
Q ss_pred eEEEeCcchHHHHHHHHHHHHHH
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAA 345 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~ 345 (601)
-||++|||.+|+++|-.|.+...
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~ 63 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALD 63 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHC
T ss_pred cEEEEcccHHHHHHHHHHHhcCC
Confidence 38999999999999988877643
No 359
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=50.90 E-value=7.2 Score=42.54 Aligned_cols=34 Identities=26% Similarity=0.292 Sum_probs=27.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.||+..|..|.. +.|+ ++.++|+..
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 689999999999999988862 2453 699999864
No 360
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=50.83 E-value=9.4 Score=37.21 Aligned_cols=108 Identities=17% Similarity=0.113 Sum_probs=55.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
.||.|+|+|..|..+|..|... | .+++++|++.--. +.+.....................+..|+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 68 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----G-------NDVTLIDQWPAHI---EAIRKNGLIADFNGEEVVANLPIFSPEEI 68 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHHHH---HHHHHHCEEEEETTEEEEECCCEECGGGC
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEECCHHHH---HHHHhCCEEEEeCCCeeEecceeecchhh
Confidence 4899999999999999888653 4 2688888752100 00100000000000000000000122222
Q ss_pred hccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 402 VRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 402 V~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
.+.+ +.|++| ++..+. ..+++++.++....+..+|..++|...
T Consensus 69 ~~~~~~~d~vi-~~v~~~-~~~~v~~~l~~~l~~~~~iv~~~~g~~ 112 (316)
T 2ew2_A 69 DHQNEQVDLII-ALTKAQ-QLDAMFKAIQPMITEKTYVLCLLNGLG 112 (316)
T ss_dssp CTTSCCCSEEE-ECSCHH-HHHHHHHHHGGGCCTTCEEEECCSSSC
T ss_pred cccCCCCCEEE-EEeccc-cHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 2211 368776 333222 458888888654455678888998764
No 361
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=50.83 E-value=47 Score=33.32 Aligned_cols=94 Identities=15% Similarity=0.146 Sum_probs=52.1
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~G-AGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.||+++| .|..|--+++++.+ ..++ +=+..+|+++--..++ ++. .++.-.. +..-..++.+
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~----~~~~------eLv~~~d~~~~~~~G~-d~g----el~g~~~---gv~v~~dl~~ 69 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLA----APDA------TLVGALDRTGSPQLGQ-DAG----AFLGKQT---GVALTDDIER 69 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHH----CTTE------EEEEEBCCTTCTTTTS-BTT----TTTTCCC---SCBCBCCHHH
T ss_pred cEEEEECCCCHHHHHHHHHHHh----CCCC------EEEEEEEecCcccccc-cHH----HHhCCCC---CceecCCHHH
Confidence 7999999 79999888887765 2332 2244567653211111 111 1110000 1123467999
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEE
Q 007499 401 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIF 439 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIF 439 (601)
+++. |||+|=+|. |.+. .+.++...+ +..|+|.
T Consensus 70 ll~~--~DVVIDfT~-p~a~-~~~~~~al~--~G~~vVi 102 (272)
T 4f3y_A 70 VCAE--ADYLIDFTL-PEGT-LVHLDAALR--HDVKLVI 102 (272)
T ss_dssp HHHH--CSEEEECSC-HHHH-HHHHHHHHH--HTCEEEE
T ss_pred HhcC--CCEEEEcCC-HHHH-HHHHHHHHH--cCCCEEE
Confidence 9875 999998874 3332 345554433 4567765
No 362
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=50.82 E-value=8.4 Score=41.10 Aligned_cols=33 Identities=27% Similarity=0.535 Sum_probs=27.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAAR-----HN-------AKVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHH-----CC-------CcEEEEeCCC
Confidence 579999999999999988865 34 3699999863
No 363
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=50.72 E-value=9.4 Score=40.06 Aligned_cols=32 Identities=34% Similarity=0.617 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.||+..|..|.++ |. ++.++++.
T Consensus 45 ~~V~IIGAGiaGL~aA~~L~~~-----G~-------~V~VlE~~ 76 (376)
T 2e1m_A 45 KRILIVGAGIAGLVAGDLLTRA-----GH-------DVTILEAN 76 (376)
T ss_dssp CEEEEECCBHHHHHHHHHHHHT-----SC-------EEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEecc
Confidence 7999999999999999888753 53 68888876
No 364
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=50.62 E-value=7.9 Score=41.41 Aligned_cols=33 Identities=24% Similarity=0.518 Sum_probs=27.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
..|+|+|||.+|+..|-.|.. .|+ ++.++|++-
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~-----~G~-------~v~viEr~~ 38 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLAR-----QGV-------RVLVVERRP 38 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 689999999999999988764 454 588888864
No 365
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=50.01 E-value=9.8 Score=40.26 Aligned_cols=32 Identities=22% Similarity=0.464 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
-.|+|+|||.||+..|..+.+ .|+ ++.++|++
T Consensus 27 ~DVvVIGgG~aGl~aA~~la~-----~G~-------~V~liEk~ 58 (484)
T 3o0h_A 27 FDLFVIGSGSGGVRAARLAGA-----LGK-------RVAIAEEY 58 (484)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CcC-------EEEEEeCC
Confidence 689999999999999988765 353 68999984
No 366
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=49.78 E-value=7.6 Score=37.56 Aligned_cols=31 Identities=16% Similarity=0.209 Sum_probs=23.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
-|+|+|+|.||+-.|..+.. .|+ ++.++|+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~-----~g~-------~v~liE~~ 36 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGR-----SSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 59999999999988866543 454 57788874
No 367
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=49.75 E-value=9.1 Score=40.27 Aligned_cols=32 Identities=22% Similarity=0.355 Sum_probs=26.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.||+..|..+... | .++.++|+.
T Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~ 37 (458)
T 1lvl_A 6 TTLLIIGGGPGGYVAAIRAGQL-----G-------IPTVLVEGQ 37 (458)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEccC
Confidence 5799999999999999777553 4 369999984
No 368
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=49.70 E-value=10 Score=37.64 Aligned_cols=107 Identities=16% Similarity=0.201 Sum_probs=59.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCC-CCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.||.|+|||+.|..+|..|.. .|.- ..++++|++---.+. .-++.+ ...+..+. .. ....+. +
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~-----~g~~-----~~V~l~d~~~~~~~~~~~~~~~-~~~~~~~~-~v---~~~~~~-~ 71 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQ-----RGIA-----REIVLEDIAKERVEAEVLDMQH-GSSFYPTV-SI---DGSDDP-E 71 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSSHHHHHHHHHHHHH-TGGGSTTC-EE---EEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCChhHHHHHHHHHHh-hhhhcCCe-EE---EeCCCH-H
Confidence 689999999999999887754 3431 379999986310000 000111 01111110 00 001122 4
Q ss_pred HhcccCCcEEEeecCCCCCC--------------CHHHHHHhhhcCCCCCeEEecCCCCCc
Q 007499 401 VVRKVKPHVLLGLSGVGGVF--------------NEEVLKAMRESDSVKPAIFAMSNPTMN 447 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~g~F--------------t~evv~~Ma~~~~erPIIFaLSNPt~~ 447 (601)
+++. .|++|=+...+..- -+++++.|++ +++..+|+.++||...
T Consensus 72 ~~~~--aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~-~~~~~~vi~~~Np~~~ 129 (319)
T 1lld_A 72 ICRD--ADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVK-VAPNAIYMLITNPVDI 129 (319)
T ss_dssp GGTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTSEEEECCSSHHH
T ss_pred HhCC--CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCceEEEecCchHH
Confidence 5555 78877444322211 1178888865 6778899999999863
No 369
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=49.61 E-value=9.1 Score=40.72 Aligned_cols=22 Identities=36% Similarity=0.613 Sum_probs=19.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQA 343 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~ 343 (601)
.+|+|+|||.||+..|..|.++
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~ 30 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQN 30 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT
T ss_pred CcEEEECCCHHHHHHHHHHHhc
Confidence 7899999999999999998764
No 370
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=49.49 E-value=9.9 Score=40.19 Aligned_cols=33 Identities=24% Similarity=0.416 Sum_probs=26.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 7 ~dVvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~~ 39 (482)
T 1ojt_A 7 YDVVVLGGGPGGYSAAFAAAD-----EGL-------KVAIVERYK 39 (482)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCC
Confidence 579999999999999977654 353 599999853
No 371
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=49.38 E-value=15 Score=37.45 Aligned_cols=124 Identities=16% Similarity=0.108 Sum_probs=76.1
Q ss_pred cCCccccCc---chhHHHHHHHHHHHHHHh---------CC---------CCCCCCCceEEEeCcchHHHHHHHHHHHHH
Q 007499 286 RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL---------SLTDFADQKIVVVGAGSAGLGVLKMAVQAA 344 (601)
Q Consensus 286 ~~~~FnDDi---QGTaav~LAgll~Alr~~---------g~---------~l~dl~~~riv~~GAGsAg~GiA~ll~~~~ 344 (601)
.+.+.|--- +.+|=-+++.+|+..|.. |. .-.+|.+.+|.|+|.|..|-.+|+.+...
T Consensus 90 gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~- 168 (320)
T 1gdh_A 90 GIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGF- 168 (320)
T ss_dssp TCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHTT-
T ss_pred CcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHHC-
Confidence 355555432 334445788888877632 10 11356669999999999999999887643
Q ss_pred HHhcCCChhhhcCeEEEEec-CccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEee-c---CCCCC
Q 007499 345 ARMAGNNDAFARNKFFLLDK-DGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGL-S---GVGGV 419 (601)
Q Consensus 345 ~~~~Gls~eeA~~~i~lvD~-~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~-S---~~~g~ 419 (601)
|+ +++.+|+ .. ... .+.... .....+|.|+++. .|+++=+ . ...+.
T Consensus 169 ----G~-------~V~~~d~~~~---------~~~---~~~~~g----~~~~~~l~ell~~--aDvVil~~p~~~~t~~~ 219 (320)
T 1gdh_A 169 ----DM-------DIDYFDTHRA---------SSS---DEASYQ----ATFHDSLDSLLSV--SQFFSLNAPSTPETRYF 219 (320)
T ss_dssp ----TC-------EEEEECSSCC---------CHH---HHHHHT----CEECSSHHHHHHH--CSEEEECCCCCTTTTTC
T ss_pred ----CC-------EEEEECCCCc---------Chh---hhhhcC----cEEcCCHHHHHhh--CCEEEEeccCchHHHhh
Confidence 42 6888887 41 110 111100 0012368899887 7887743 2 12367
Q ss_pred CCHHHHHHhhhcCCCCCeEEecCC
Q 007499 420 FNEEVLKAMRESDSVKPAIFAMSN 443 (601)
Q Consensus 420 Ft~evv~~Ma~~~~erPIIFaLSN 443 (601)
++++.++.|. +.-+|.-.|.
T Consensus 220 i~~~~l~~mk----~gailIn~ar 239 (320)
T 1gdh_A 220 FNKATIKSLP----QGAIVVNTAR 239 (320)
T ss_dssp BSHHHHTTSC----TTEEEEECSC
T ss_pred cCHHHHhhCC----CCcEEEECCC
Confidence 8888888883 4667877776
No 372
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=49.24 E-value=10 Score=40.67 Aligned_cols=32 Identities=31% Similarity=0.461 Sum_probs=25.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.+|+..|-.|.. .|+ ++.++|++
T Consensus 13 ~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 44 (499)
T 2qa2_A 13 ASVIVVGAGPAGLMLAGELRL-----GGV-------DVMVLEQL 44 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 789999999999999988765 454 47777764
No 373
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=49.05 E-value=3.8 Score=42.41 Aligned_cols=120 Identities=18% Similarity=0.180 Sum_probs=69.9
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHHhcCC-ChhhhcCeEEEEecCc---cccCCCCCCChhhhccccccCCCCCcccCC
Q 007499 322 QKIVVVG-AGSAGLGVLKMAVQAAARMAGN-NDAFARNKFFLLDKDG---LITKERKNLDPAAAPFAKDPGDFMGLREGA 396 (601)
Q Consensus 322 ~riv~~G-AGsAg~GiA~ll~~~~~~~~Gl-s~eeA~~~i~lvD~~G---Li~~~r~~l~~~k~~fa~~~~~~~~~~~~~ 396 (601)
.||+|.| ||..|..+|.+|+. .|+ +++.-. .+.|+|.+. .+.-...+|.+.-.+|.++. ....
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~-----~~~~~e~~~~-~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~------~~~~ 71 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGN-----GSVFGKDQPI-ILVLLDITPMMGVLDGVLMELQDCALPLLKDV------IATD 71 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHT-----TTTTCTTCCE-EEEEECCGGGHHHHHHHHHHHHHTCCTTEEEE------EEES
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CCCccccCCC-EEEEEeCCCccccchhhHhhhHhhhhcccCCE------EEcC
Confidence 6899999 69999888877764 333 111111 299999852 11110112333222333221 1235
Q ss_pred CHHHHhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCCCCCe-EEecCCCCCccCCCHHHHhccc
Q 007499 397 SLLEVVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPA-IFAMSNPTMNAECTAADAFKHA 459 (601)
Q Consensus 397 ~L~e~V~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~~erPI-IFaLSNPt~~aE~tpeda~~wt 459 (601)
++.+++++ .|++|=+.+.+ |- ..+++++.+.+ ++.+-+ |+-.|||.. .+..-+++.+
T Consensus 72 ~~~~~~~d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~-~~~~~~~vivvsNPvd---~~t~~~~~~~ 143 (333)
T 5mdh_A 72 KEEIAFKD--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDK-YAKKSVKVIVVGNPAN---TNCLTASKSA 143 (333)
T ss_dssp CHHHHTTT--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHH-HSCTTCEEEECSSSHH---HHHHHHHHTC
T ss_pred CcHHHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCCeEEEEcCCchH---HHHHHHHHHc
Confidence 68888988 79887444433 21 23567777754 676664 899999974 5666665544
No 374
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=48.96 E-value=19 Score=36.72 Aligned_cols=32 Identities=28% Similarity=0.501 Sum_probs=21.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
++|+|+|||..|...+.+... .|. ++|+.+|+
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~-----~Ga------~~Vi~~~~ 226 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKT-----AGA------SRIIGIDI 226 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 799999998777655544432 353 47888875
No 375
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=48.80 E-value=8.2 Score=41.25 Aligned_cols=33 Identities=21% Similarity=0.590 Sum_probs=26.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.||+..|-.|.. .|+ ++.++|+.-
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAM-----RGH-------RVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEccCC
Confidence 689999999999999887753 454 688899874
No 376
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=48.79 E-value=11 Score=39.03 Aligned_cols=33 Identities=27% Similarity=0.551 Sum_probs=27.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.+|+..|..|.+ .| .++.++|+..
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~-----~g-------~~v~v~E~~~ 36 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAE-----KG-------HQVHIIDQRD 36 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CC-------CcEEEEEecC
Confidence 689999999999999988864 24 4788998853
No 377
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=48.79 E-value=8.8 Score=37.67 Aligned_cols=36 Identities=28% Similarity=0.365 Sum_probs=27.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 368 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 368 (601)
..|+|+|||.||+..|..+.+. .|+ ++.++|+..-+
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~----~G~-------~V~viEk~~~~ 75 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKN----PNV-------QVAIIEQSVSP 75 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTS----TTS-------CEEEEESSSSC
T ss_pred cCEEEECccHHHHHHHHHHHHc----CCC-------eEEEEECCCCC
Confidence 6899999999999998877541 143 68899987433
No 378
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=48.75 E-value=10 Score=37.10 Aligned_cols=32 Identities=31% Similarity=0.427 Sum_probs=23.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
--++|+|||.||+-.|-.+. +.|+ ++.++|+.
T Consensus 7 yDVvIIGaGpAGlsAA~~la-----r~g~-------~v~lie~~ 38 (304)
T 4fk1_A 7 IDCAVIGAGPAGLNASLVLG-----RARK-------QIALFDNN 38 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHH-----HTTC-------CEEEEECS
T ss_pred cCEEEECCCHHHHHHHHHHH-----HCCC-------CEEEEeCC
Confidence 35899999999988775443 3454 68899975
No 379
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=48.69 E-value=10 Score=42.75 Aligned_cols=33 Identities=24% Similarity=0.519 Sum_probs=27.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|||+|||.||+..|..+.. .|. ++.++|+..
T Consensus 390 ~~VvIIGgGpAGl~aA~~L~~-----~G~-------~Vtlie~~~ 422 (729)
T 1o94_A 390 DSVLIVGAGPSGSEAARVLME-----SGY-------TVHLTDTAE 422 (729)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 789999999999999988865 342 699999863
No 380
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=48.38 E-value=12 Score=39.92 Aligned_cols=34 Identities=26% Similarity=0.430 Sum_probs=27.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|+|.||+..|..+... |- ..+|.++|+.
T Consensus 7 ~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~vie~~ 40 (460)
T 1cjc_A 7 PQICVVGSGPAGFYTAQHLLKH-----HS-----RAHVDIYEKQ 40 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CS-----SCEEEEECSS
T ss_pred ceEEEECcCHHHHHHHHHHHhc-----CC-----CCCEEEEeCC
Confidence 6899999999999999988753 31 1479999986
No 381
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=48.33 E-value=10 Score=40.60 Aligned_cols=32 Identities=31% Similarity=0.468 Sum_probs=25.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
..|+|+|||.+|+..|-.|.. .|+ ++.++|++
T Consensus 12 ~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 43 (500)
T 2qa1_A 12 AAVIVVGAGPAGMMLAGELRL-----AGV-------EVVVLERL 43 (500)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 789999999999999988765 454 46777764
No 382
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=48.16 E-value=7.2 Score=38.69 Aligned_cols=32 Identities=22% Similarity=0.379 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
..|+|+|||.+|+.+|..|.. | .++.++|+..
T Consensus 10 ~dv~IIGaGi~Gls~A~~La~------G-------~~V~vlE~~~ 41 (381)
T 3nyc_A 10 ADYLVIGAGIAGASTGYWLSA------H-------GRVVVLEREA 41 (381)
T ss_dssp CSEEEECCSHHHHHHHHHHTT------T-------SCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHhC------C-------CCEEEEECCC
Confidence 679999999999999988762 4 3689999874
No 383
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=47.85 E-value=30 Score=35.11 Aligned_cols=33 Identities=21% Similarity=0.388 Sum_probs=23.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 321 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 321 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.++|+|.|||..|..++.++.. .| -+++.+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~-----~G-------a~Vi~~~~~ 213 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRT-----YG-------LEVWMANRR 213 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHH-----HT-------CEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeCC
Confidence 3899999997777666555443 34 268888874
No 384
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=47.84 E-value=44 Score=34.70 Aligned_cols=133 Identities=12% Similarity=0.027 Sum_probs=87.2
Q ss_pred HHHhCCCeE-EeeCCCChHHHHHHHHhccCCccc--cCcchhHHHHHHHHHHHHHHhC------CCCCCCCCceEEEeCc
Q 007499 259 VHARWPKAI-FEDFQMKWAFETLERYRKRFCMFN--DDIQGTAGVALAGLLGTVRAQG------LSLTDFADQKIVVVGA 329 (601)
Q Consensus 259 v~~~~P~~l-~EDf~~~~Af~iL~ryr~~~~~Fn--DDiQGTaav~LAgll~Alr~~g------~~l~dl~~~riv~~GA 329 (601)
|..+|.+++ +..++. .+.+.|.+| ..+|+.| || .---+=+||=++.-.+..| ++++. .+|+++|-
T Consensus 96 vls~~~D~iviR~~~~-~~~~~lA~~-~~vPVINag~~-~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~g---l~va~vGD 169 (328)
T 3grf_A 96 VFSRMVDICTARLATK-EMMREMAQH-ASVPCINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNGFKG---IKFAYCGD 169 (328)
T ss_dssp HHTTTCSEEEEECSSH-HHHHHHHHH-CSSCEEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTTGGG---CCEEEESC
T ss_pred HHHhhCCEEEEecCCh-hHHHHHHHh-CCCCEEeCCCC-CCCcHHHHHHHHHHHHHhCCccccccccCC---cEEEEeCC
Confidence 445678888 888864 455566666 4689998 66 5556667777777666666 25666 99999999
Q ss_pred chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccc---cCCCCCcccCCCHHHHhcccC
Q 007499 330 GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKD---PGDFMGLREGASLLEVVRKVK 406 (601)
Q Consensus 330 GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~---~~~~~~~~~~~~L~e~V~~vk 406 (601)
+. + .+|+-++.++. +-|+ +|.++-.+|+..+-.+++.+.-+.++.. ... .....++.|+|++
T Consensus 170 ~~-~-~va~Sl~~~~~-~~G~-------~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~---v~~~~d~~eav~~-- 234 (328)
T 3grf_A 170 SM-N-NVTYDLMRGCA-LLGM-------ECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGS---IKIFHDCKKGCEG-- 234 (328)
T ss_dssp CS-S-HHHHHHHHHHH-HHTC-------EEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCE---EEEESSHHHHHTT--
T ss_pred CC-c-chHHHHHHHHH-HcCC-------EEEEECChHhhhCCCHHHHHHHHHHHhhccCCCe---EEEEcCHHHHhcC--
Confidence 85 3 58888888877 5675 6999999888632111122122223221 111 1124689999998
Q ss_pred CcEEEe
Q 007499 407 PHVLLG 412 (601)
Q Consensus 407 ptvLIG 412 (601)
.||+.-
T Consensus 235 aDvvyt 240 (328)
T 3grf_A 235 VDVVYT 240 (328)
T ss_dssp CSEEEE
T ss_pred CCEEEe
Confidence 799974
No 385
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=47.82 E-value=9.8 Score=41.65 Aligned_cols=33 Identities=27% Similarity=0.464 Sum_probs=27.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
..|+|+|+|.+|+++|..+.. .|+ ++.++|+..
T Consensus 33 ~DVvVIGgGi~G~~~A~~La~-----rG~-------~V~LlE~~~ 65 (571)
T 2rgh_A 33 LDLLIIGGGITGAGVAVQAAA-----SGI-------KTGLIEMQD 65 (571)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCC
Confidence 569999999999999988765 364 588999764
No 386
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=47.66 E-value=17 Score=37.79 Aligned_cols=21 Identities=43% Similarity=0.697 Sum_probs=18.8
Q ss_pred ceEEEeCcchHHHHHHHHHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQ 342 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~ 342 (601)
--|+|+|||-+|+..|..|.+
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k 31 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQ 31 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHh
Confidence 469999999999999998865
No 387
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=47.59 E-value=1.5e+02 Score=30.20 Aligned_cols=125 Identities=14% Similarity=0.150 Sum_probs=86.5
Q ss_pred HHHhC-CCeE-EeeCCCChHHHHHHHHhccCCccc--cCcchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCc--chH
Q 007499 259 VHARW-PKAI-FEDFQMKWAFETLERYRKRFCMFN--DDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGA--GSA 332 (601)
Q Consensus 259 v~~~~-P~~l-~EDf~~~~Af~iL~ryr~~~~~Fn--DDiQGTaav~LAgll~Alr~~g~~l~dl~~~riv~~GA--GsA 332 (601)
+...| .+++ +..++...+..+|.+| ..+|+.| |-..---+=+||=++.-.+..| +++. .+|+++|- |+
T Consensus 85 vls~~~~D~iviR~~~~~~~~~~la~~-~~vPVINAG~g~~~HPtQaLaDl~Ti~e~~g-~l~g---l~va~vGDl~~~- 158 (291)
T 3d6n_B 85 TFEGLGFDYVVFRVPFVFFPYKEIVKS-LNLRLVNAGDGTHQHPSQGLIDFFTIKEHFG-EVKD---LRVLYVGDIKHS- 158 (291)
T ss_dssp HHHHTTCSEEEEEESSCCCSCHHHHHT-CSSEEEEEEETTTBCHHHHHHHHHHHHHHHS-CCTT---CEEEEESCCTTC-
T ss_pred HHHHhcCCEEEEEcCChHHHHHHHHHh-CCCCEEeCccCCCcCcHHHHHHHHHHHHHhC-CcCC---cEEEEECCCCCC-
Confidence 44667 7998 9988877766647777 4699999 4444455566777776666665 5666 99999998 62
Q ss_pred HHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHHhcccCCcEEEe
Q 007499 333 GLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLG 412 (601)
Q Consensus 333 g~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG 412 (601)
-+|+-++.++. +-|+ +|.++-.+|+.-+. +. +.. .....++.|+|++ .||+.-
T Consensus 159 --rva~Sl~~~~~-~~g~-------~v~~~~P~~~~p~~---~~-------~~g-----~~~~~d~~eav~~--aDvvy~ 211 (291)
T 3d6n_B 159 --RVFRSGAPLLN-MFGA-------KIGVCGPKTLIPRD---VE-------VFK-----VDVFDDVDKGIDW--ADVVIW 211 (291)
T ss_dssp --HHHHHHHHHHH-HTTC-------EEEEESCGGGSCTT---GG-------GGC-----EEEESSHHHHHHH--CSEEEE
T ss_pred --chHHHHHHHHH-HCCC-------EEEEECCchhCCch---HH-------HCC-----CEEEcCHHHHhCC--CCEEEE
Confidence 57777777777 5675 69999999884322 21 100 0123679999999 799997
Q ss_pred ecCC
Q 007499 413 LSGV 416 (601)
Q Consensus 413 ~S~~ 416 (601)
+-.+
T Consensus 212 ~~~q 215 (291)
T 3d6n_B 212 LRLQ 215 (291)
T ss_dssp CCCC
T ss_pred eCcc
Confidence 5443
No 388
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=47.32 E-value=7.1 Score=39.30 Aligned_cols=31 Identities=23% Similarity=0.550 Sum_probs=24.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
+||-|+|-|..|.++|..|+++ |. +++.+|+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-----G~-------~V~v~dr 36 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-----GY-------ELVVWNR 36 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEC--
T ss_pred CcEEEEecHHHHHHHHHHHHHC-----CC-------eEEEEeC
Confidence 6899999999999999998764 43 5777776
No 389
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=47.30 E-value=10 Score=40.73 Aligned_cols=38 Identities=18% Similarity=0.294 Sum_probs=28.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHH-------hcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAAR-------MAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~-------~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|||+|||.||.-.|-.|...+.. ..|+ +|.++++.-
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~-------~V~liE~~~ 52 (526)
T 2pyx_A 8 TEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKL-------NITLIESPD 52 (526)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSC-------EEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhhccccccccCCCCC-------eEEEEeCCC
Confidence 6899999999999999888764310 0354 688999863
No 390
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=47.29 E-value=9.9 Score=39.86 Aligned_cols=34 Identities=32% Similarity=0.538 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
..|+|+|||.||+..|-.+.+ .|. ++.++|+...
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~-----~G~-------~V~llEk~~~ 60 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAE-----EGA-------NVLLLDKGNK 60 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------CEEEEECCCC
Confidence 569999999999999887754 353 6999998653
No 391
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=47.22 E-value=10 Score=39.91 Aligned_cols=32 Identities=25% Similarity=0.489 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.||+..|..+.+ .|+ ++.++|++
T Consensus 21 ~dVvIIGgG~aGl~aA~~la~-----~G~-------~V~liE~~ 52 (478)
T 3dk9_A 21 YDYLVIGGGSGGLASARRAAE-----LGA-------RAAVVESH 52 (478)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEecC
Confidence 679999999999999988765 353 68999965
No 392
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=47.15 E-value=11 Score=40.03 Aligned_cols=33 Identities=27% Similarity=0.511 Sum_probs=25.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.||+..|..|.+. |. ++.++++..
T Consensus 5 ~~vvIIGaG~aGL~aA~~L~~~-----G~-------~V~vlE~~~ 37 (520)
T 1s3e_A 5 CDVVVVGGGISGMAAAKLLHDS-----GL-------NVVVLEARD 37 (520)
T ss_dssp CSEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 5799999999999999988753 43 577777653
No 393
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=47.10 E-value=21 Score=33.58 Aligned_cols=99 Identities=18% Similarity=0.250 Sum_probs=52.0
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.+|+|.|| |-.|..+++.|++ .|- -++++++++.- .-..+......+.+- ++ .+..++.+
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~-----~G~------~~V~~~~R~~~---~~~~~~~~~~~~~~~--Dl---~d~~~~~~ 84 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLAD-----KQT------IKQTLFARQPA---KIHKPYPTNSQIIMG--DV---LNHAALKQ 84 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTT-----CTT------EEEEEEESSGG---GSCSSCCTTEEEEEC--CT---TCHHHHHH
T ss_pred cEEEEEeCCcHHHHHHHHHHHh-----CCC------ceEEEEEcChh---hhcccccCCcEEEEe--cC---CCHHHHHH
Confidence 78999996 5566666555543 341 26888877521 001111111111111 11 12345788
Q ss_pred HhcccCCcEEEeecCCCCC--CCHHHHHHhhhcCCCCCeEEecC
Q 007499 401 VVRKVKPHVLLGLSGVGGV--FNEEVLKAMRESDSVKPAIFAMS 442 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~g~--Ft~evv~~Ma~~~~erPIIFaLS 442 (601)
+++. .|++|=+.+.... -++.+++.|.+ ..-+-|||.=|
T Consensus 85 ~~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~-~~~~~iV~iSS 125 (236)
T 3qvo_A 85 AMQG--QDIVYANLTGEDLDIQANSVIAAMKA-CDVKRLIFVLS 125 (236)
T ss_dssp HHTT--CSEEEEECCSTTHHHHHHHHHHHHHH-TTCCEEEEECC
T ss_pred HhcC--CCEEEEcCCCCchhHHHHHHHHHHHH-cCCCEEEEEec
Confidence 8886 6999966553322 24667888854 33344666443
No 394
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=46.97 E-value=11 Score=40.87 Aligned_cols=36 Identities=8% Similarity=-0.179 Sum_probs=26.2
Q ss_pred ecccccccccchhhHHHHHHcCCcccCHHHHHHHHH
Q 007499 483 HVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAE 518 (601)
Q Consensus 483 ~p~Q~NN~~iFPGiglG~l~~~a~~itd~m~~aAA~ 518 (601)
.||+.-|-+++|.+.=++.++...-++.+.+..|.+
T Consensus 232 ~pGfi~Nril~~~~~EA~~l~~~~Ga~~e~ID~a~~ 267 (460)
T 3k6j_A 232 CKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIIT 267 (460)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 488888888899888888777333377777776654
No 395
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=46.93 E-value=16 Score=37.38 Aligned_cols=92 Identities=22% Similarity=0.296 Sum_probs=53.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhcccccc-CCCCCcccCCCHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDP-GDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~-~~~~~~~~~~~L~e 400 (601)
-||+|+|||-.|--+|+.|.+ ...+.++|+..- .+...+ .++... -+ ..+..+|.+
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~~------~~~~~~-~~~~~~~~d---~~d~~~l~~ 73 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNNE------NLEKVK-EFATPLKVD---ASNFDKLVE 73 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCHH------HHHHHT-TTSEEEECC---TTCHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCHH------HHHHHh-ccCCcEEEe---cCCHHHHHH
Confidence 689999999888777766532 135777776421 111111 111110 00 012346888
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 007499 401 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 443 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSN 443 (601)
++++ .|++|-+ .|.-|...++++-.+ +... +|=+|-
T Consensus 74 ~~~~--~DvVi~~--~p~~~~~~v~~~~~~--~g~~-yvD~s~ 109 (365)
T 3abi_A 74 VMKE--FELVIGA--LPGFLGFKSIKAAIK--SKVD-MVDVSF 109 (365)
T ss_dssp HHTT--CSEEEEC--CCGGGHHHHHHHHHH--HTCE-EEECCC
T ss_pred HHhC--CCEEEEe--cCCcccchHHHHHHh--cCcc-eEeeec
Confidence 8887 7998854 467788899988754 2233 455664
No 396
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=46.88 E-value=9.4 Score=36.40 Aligned_cols=36 Identities=17% Similarity=0.232 Sum_probs=23.0
Q ss_pred CCCCceEEEeCcc---hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 318 DFADQKIVVVGAG---SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 318 dl~~~riv~~GAG---sAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
++.+.++||.||+ ..|.++|+.| . +.| -+++++|++
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l----~-~~G-------~~V~~~~r~ 49 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKAC----K-REG-------AELAFTYVG 49 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHH----H-HTT-------CEEEEEESS
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHH----H-HcC-------CCEEEEecc
Confidence 3445999999984 2344444444 4 345 268889876
No 397
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=46.81 E-value=9.3 Score=41.73 Aligned_cols=32 Identities=25% Similarity=0.390 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
--|+|+|+|.+|+++|..+.. .|+ ++.++++.
T Consensus 19 ~DVvVIGgGi~Gl~~A~~La~-----~G~-------~V~LlEk~ 50 (561)
T 3da1_A 19 LDLLVIGGGITGAGIALDAQV-----RGI-------QTGLVEMN 50 (561)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEECC
Confidence 569999999999999987764 464 58899986
No 398
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=46.70 E-value=11 Score=35.51 Aligned_cols=31 Identities=13% Similarity=0.382 Sum_probs=25.3
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
||+|+|+|..|..+|+.|... | ..+.++|++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-----g-------~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-----K-------YGVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-----T-------CCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC
Confidence 699999999999999888653 4 368899974
No 399
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=46.62 E-value=45 Score=33.22 Aligned_cols=101 Identities=18% Similarity=0.245 Sum_probs=57.5
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCCh-hhhccccccCCCCCcc-cC
Q 007499 319 FADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP-AAAPFAKDPGDFMGLR-EG 395 (601)
Q Consensus 319 l~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~-~k~~fa~~~~~~~~~~-~~ 395 (601)
+...+|+|.|| |-.|..+++.|++. .| -+++.+|+.. .....+.. ....+..- ++ . +.
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~---~~~~~~~~~~~v~~~~~--Dl---~~d~ 82 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT---DRLGDLVKHERMHFFEG--DI---TINK 82 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC---TTTGGGGGSTTEEEEEC--CT---TTCH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh---hhhhhhccCCCeEEEeC--cc---CCCH
Confidence 33489999996 77777777766652 23 3788888742 10011110 11122211 10 1 22
Q ss_pred CCHHHHhcccCCcEEEeecCCCC----------------CCCHHHHHHhhhcCCCCCeEEecC
Q 007499 396 ASLLEVVRKVKPHVLLGLSGVGG----------------VFNEEVLKAMRESDSVKPAIFAMS 442 (601)
Q Consensus 396 ~~L~e~V~~vkptvLIG~S~~~g----------------~Ft~evv~~Ma~~~~erPIIFaLS 442 (601)
.++.+++++ +|++|=+.+... .-|..+++++.+ .. +.+||.=|
T Consensus 83 ~~~~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~-~~~v~~SS 141 (372)
T 3slg_A 83 EWVEYHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVK-YG-KHLVFPST 141 (372)
T ss_dssp HHHHHHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHH-HT-CEEEEECC
T ss_pred HHHHHHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHH-hC-CcEEEeCc
Confidence 457788875 899997665432 234678888854 44 77888655
No 400
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=46.61 E-value=13 Score=39.06 Aligned_cols=32 Identities=31% Similarity=0.425 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
-.|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 4 ~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~ 35 (476)
T 3lad_A 4 FDVIVIGAGPGGYVAAIKSAQL-----G-------LKTALIEKY 35 (476)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECC
T ss_pred CCEEEECcCHHHHHHHHHHHhC-----C-------CEEEEEeCC
Confidence 5699999999999999887653 4 369999986
No 401
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=46.55 E-value=25 Score=35.03 Aligned_cols=51 Identities=18% Similarity=0.196 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 299 GVALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 299 av~LAgll~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
.+.++..+.|+.....--.. ++|+|.|| |..|..++.++.. .|. +++.+|+
T Consensus 131 ~~~~~tA~~al~~~~~~~~g---~~vlI~Ga~g~iG~~~~~~a~~-----~Ga-------~Vi~~~~ 182 (336)
T 4b7c_A 131 GMTGMTAYFALLDVGQPKNG---ETVVISGAAGAVGSVAGQIARL-----KGC-------RVVGIAG 182 (336)
T ss_dssp SHHHHHHHHHHHHTTCCCTT---CEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred ccHHHHHHHHHHHhcCCCCC---CEEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 34556666677444433345 79999999 7777666555442 342 6888875
No 402
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=46.51 E-value=11 Score=41.67 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=27.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
..|+|+|||.||+.+|..|.+ .|. ++.++|+..
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~-----~G~-------~V~vlEk~~ 305 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLR-----RGW-------QVTLYCADE 305 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 689999999999999988764 453 799999863
No 403
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=46.44 E-value=11 Score=40.87 Aligned_cols=33 Identities=9% Similarity=0.354 Sum_probs=26.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
..|+|+|||.+|+..|-.|.. .|+ ++.++|++.
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~-----~G~-------~V~vlEr~~ 59 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAH-----RQV-------GHLVVEQTD 59 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 579999999999999888765 454 577888753
No 404
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=46.27 E-value=15 Score=38.49 Aligned_cols=32 Identities=34% Similarity=0.596 Sum_probs=25.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.+|+..|..|.+. | .++.++++.
T Consensus 34 ~~v~IiGaG~~Gl~aA~~l~~~-----g-------~~v~vlE~~ 65 (498)
T 2iid_A 34 KHVVIVGAGMAGLSAAYVLAGA-----G-------HQVTVLEAS 65 (498)
T ss_dssp CEEEEECCBHHHHHHHHHHHHH-----T-------CEEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC
Confidence 6899999999999999988764 4 256677665
No 405
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=45.99 E-value=9.9 Score=39.76 Aligned_cols=22 Identities=32% Similarity=0.418 Sum_probs=18.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQA 343 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~ 343 (601)
.+|||+|||-+|+..|..|.++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~ 23 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAA 23 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHHC
Confidence 4799999999999999887653
No 406
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=45.93 E-value=31 Score=35.56 Aligned_cols=48 Identities=19% Similarity=0.216 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 302 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 302 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
++..+.|++..+.+ .. ++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 171 ~~ta~~al~~~~~~-~g---~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 218 (398)
T 2dph_A 171 LPTGFHGCVSAGVK-PG---SHVYIAGAGPVGRCAAAGARL-----LGA------ACVIVGDQ 218 (398)
T ss_dssp HHHHHHHHHHTTCC-TT---CEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEEES
T ss_pred HHHHHHHHHHcCCC-CC---CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEEcC
Confidence 44445666554433 34 799999998777655544432 242 47888886
No 407
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=45.92 E-value=16 Score=36.26 Aligned_cols=99 Identities=17% Similarity=0.319 Sum_probs=56.8
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhc----cccccCCC-CC-ccc
Q 007499 322 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAP----FAKDPGDF-MG-LRE 394 (601)
Q Consensus 322 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~----fa~~~~~~-~~-~~~ 394 (601)
.+|+|.|| |-.|-.|++.|++ .| .+++.++++.- ..+.+.. +.....++ .+ ..+
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~-----~g-------~~V~~l~R~~~-------~~~~~~~~~~~l~~~~v~~~~~Dl~d 71 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLD-----AH-------RPTYILARPGP-------RSPSKAKIFKALEDKGAIIVYGLINE 71 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSC-------CCHHHHHHHHHHHHTTCEEEECCTTC
T ss_pred CeEEEECCCcHHHHHHHHHHHH-----CC-------CCEEEEECCCC-------CChhHHHHHHHHHhCCcEEEEeecCC
Confidence 78999999 8788777776654 34 26888887530 1111111 11110000 00 112
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCC-CCHHHHHHhhhcCCCCCeEE
Q 007499 395 GASLLEVVRKVKPHVLLGLSGVGGV-FNEEVLKAMRESDSVKPAIF 439 (601)
Q Consensus 395 ~~~L~e~V~~vkptvLIG~S~~~g~-Ft~evv~~Ma~~~~erPIIF 439 (601)
..+|.++++..++|++|-+.+..+. -+..+++++.+..+-+-+|+
T Consensus 72 ~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 72 QEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred HHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 3568889986679999987764332 45788888865331344554
No 408
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=45.91 E-value=22 Score=35.15 Aligned_cols=107 Identities=14% Similarity=0.177 Sum_probs=57.0
Q ss_pred CCCCCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCC-CCCCChhhhccccccCCCCCcc
Q 007499 316 LTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLR 393 (601)
Q Consensus 316 l~dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~-r~~l~~~k~~fa~~~~~~~~~~ 393 (601)
..++.+.+|+|.|| |-.|..+++.|++ .| -+++.+|+..--... ...+. ...+..- ++ .
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~~~~~~~~~l~--~v~~~~~--Dl---~ 75 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLP-----QG-------HEILVIDNFATGKREVLPPVA--GLSVIEG--SV---T 75 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGG-----GT-------CEEEEEECCSSSCGGGSCSCT--TEEEEEC--CT---T
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCCccchhhhhccC--CceEEEe--eC---C
Confidence 34455599999998 6666666655543 34 368888874110000 01110 1111110 11 1
Q ss_pred cCCCHHHHhcccCCcEEEeecCCCCC-C------------CHHHHHHhhhcCCCCCeEEecC
Q 007499 394 EGASLLEVVRKVKPHVLLGLSGVGGV-F------------NEEVLKAMRESDSVKPAIFAMS 442 (601)
Q Consensus 394 ~~~~L~e~V~~vkptvLIG~S~~~g~-F------------t~evv~~Ma~~~~erPIIFaLS 442 (601)
+..++.++++.+++|++|=+.+.... - +..+++++.+ ..-+.|||.=|
T Consensus 76 d~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~-~~~~~iV~~SS 136 (330)
T 2pzm_A 76 DAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASK-AGVKRLLNFQT 136 (330)
T ss_dssp CHHHHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHH-HTCSEEEEEEE
T ss_pred CHHHHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHH-cCCCEEEEecC
Confidence 22357788876679999987765432 0 2346666643 33456887544
No 409
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=45.83 E-value=29 Score=35.18 Aligned_cols=32 Identities=31% Similarity=0.430 Sum_probs=21.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
++|+|+|+|+.|...+.+... .|. ++|+.+|+
T Consensus 192 ~~VlV~GaG~vG~~a~qlak~-----~Ga------~~Vi~~~~ 223 (371)
T 1f8f_A 192 SSFVTWGAGAVGLSALLAAKV-----CGA------SIIIAVDI 223 (371)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-----HTC------SEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 799999998777665544432 242 46888876
No 410
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=45.78 E-value=10 Score=39.52 Aligned_cols=34 Identities=24% Similarity=0.399 Sum_probs=27.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
-+|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 5 ~dViIIGgG~aGl~aA~~la~-----~G~-------~V~vlEk~~~ 38 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAK-----LGK-------SVTVFDNGKK 38 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 579999999999999887764 353 6899998653
No 411
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=45.76 E-value=23 Score=32.60 Aligned_cols=95 Identities=18% Similarity=0.231 Sum_probs=50.4
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.+|+|.|| |-.|-.+++.|++ .| -+++.++++.- ....+.+ ...+..- ++ .+..++.+
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~-~~~~~~~--Dl---~d~~~~~~ 63 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN-----RG-------FEVTAVVRHPE---KIKIENE-HLKVKKA--DV---SSLDEVCE 63 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT-----TT-------CEEEEECSCGG---GCCCCCT-TEEEECC--CT---TCHHHHHH
T ss_pred CEEEEEcCCchHHHHHHHHHHH-----CC-------CEEEEEEcCcc---cchhccC-ceEEEEe--cC---CCHHHHHH
Confidence 58999997 5555555555543 44 37888888621 1112211 1112111 11 12345888
Q ss_pred HhcccCCcEEEeecCCCC----------CCCHHHHHHhhhcCCCCCeEEe
Q 007499 401 VVRKVKPHVLLGLSGVGG----------VFNEEVLKAMRESDSVKPAIFA 440 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~g----------~Ft~evv~~Ma~~~~erPIIFa 440 (601)
+++. +|++|=+.+... ..+..++++|.+ ..-+-+||.
T Consensus 64 ~~~~--~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~ 110 (227)
T 3dhn_A 64 VCKG--ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKK-AGVNRFLMV 110 (227)
T ss_dssp HHTT--CSEEEECCCC------CCSHHHHHHHHHHHHHHH-TTCSEEEEE
T ss_pred HhcC--CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHH-hCCCEEEEe
Confidence 8886 899997765321 024556777754 333456663
No 412
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=45.66 E-value=12 Score=38.20 Aligned_cols=34 Identities=32% Similarity=0.581 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.+|+..|..|.+. |. .++.++++..
T Consensus 7 ~~v~IIGaG~aGl~aA~~L~~~-----g~------~~v~v~E~~~ 40 (424)
T 2b9w_A 7 SRIAIIGAGPAGLAAGMYLEQA-----GF------HDYTILERTD 40 (424)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhC-----CC------CcEEEEECCC
Confidence 7899999999999999888653 41 2577777653
No 413
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=45.64 E-value=13 Score=38.36 Aligned_cols=34 Identities=21% Similarity=0.408 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.+|+..|..|.+. .| .++.++++..
T Consensus 8 ~~v~IiGaG~~Gl~aA~~L~~~----~g-------~~v~v~E~~~ 41 (399)
T 1v0j_A 8 FDLFVVGSGFFGLTIAERVATQ----LD-------KRVLVLERRP 41 (399)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH----SC-------CCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHh----CC-------CCEEEEeCCC
Confidence 6899999999999999988753 14 3688888763
No 414
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=45.34 E-value=9.8 Score=42.44 Aligned_cols=33 Identities=18% Similarity=0.212 Sum_probs=27.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
..|+|+|||.||+.+|..|.+ .|. ++.++|+..
T Consensus 265 ~DVvIIGgGiaGlsaA~~La~-----~G~-------~V~vlEk~~ 297 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQR-----RGA-------VVTLYCADA 297 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEeCCC
Confidence 679999999999999987764 453 699999863
No 415
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=45.34 E-value=13 Score=38.30 Aligned_cols=32 Identities=25% Similarity=0.490 Sum_probs=25.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.||+..|..|... |. ++.+++++
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~-----g~-------~v~v~E~~ 37 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKA-----GL-------SVAVIEAR 37 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEECC
Confidence 6899999999999999888653 43 47777765
No 416
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=45.27 E-value=9.7 Score=39.56 Aligned_cols=32 Identities=31% Similarity=0.506 Sum_probs=24.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.+|+..|..|.+ .|. ++.++++.
T Consensus 17 ~~v~iiG~G~~Gl~aa~~l~~-----~g~-------~v~v~E~~ 48 (478)
T 2ivd_A 17 MNVAVVGGGISGLAVAHHLRS-----RGT-------DAVLLESS 48 (478)
T ss_dssp CCEEEECCBHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcC
Confidence 689999999999999988764 343 46666665
No 417
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=44.98 E-value=9 Score=38.79 Aligned_cols=35 Identities=31% Similarity=0.593 Sum_probs=28.2
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 319 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 319 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
|.+.+|||+|+|..|..-+++|+.+ | .++.++|.+
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~-----G-------a~VtViap~ 45 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPT-----G-------CKLTLVSPD 45 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGG-----T-------CEEEEEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhC-----C-------CEEEEEcCC
Confidence 3449999999999999999888764 3 368888874
No 418
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=44.91 E-value=55 Score=32.81 Aligned_cols=79 Identities=15% Similarity=0.104 Sum_probs=49.7
Q ss_pred CceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHH
Q 007499 321 DQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 399 (601)
Q Consensus 321 ~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~ 399 (601)
+.||+++|+ |..|--+++.+.+ .|. +-++.+|.+.. + . ..+ +.+-..|+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~-----~g~------~~V~~V~p~~~---g-~------~~~--------G~~vy~sl~ 57 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIA-----YGT------KMVGGVTPGKG---G-T------THL--------GLPVFNTVR 57 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-----HTC------EEEEEECTTCT---T-C------EET--------TEEEESSHH
T ss_pred CCEEEEECCCChHHHHHHHHHHH-----CCC------eEEEEeCCCcc---c-c------eeC--------CeeccCCHH
Confidence 379999999 9887666665443 343 24667776411 0 0 011 111246799
Q ss_pred HHhcccCCcEEEeecCCCCCCCHHHHHHhhh
Q 007499 400 EVVRKVKPHVLLGLSGVGGVFNEEVLKAMRE 430 (601)
Q Consensus 400 e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~ 430 (601)
|+.+..++|+.|=++ |..+..+++++..+
T Consensus 58 el~~~~~~D~viI~t--P~~~~~~~~~ea~~ 86 (288)
T 2nu8_A 58 EAVAATGATASVIYV--PAPFCKDSILEAID 86 (288)
T ss_dssp HHHHHHCCCEEEECC--CGGGHHHHHHHHHH
T ss_pred HHhhcCCCCEEEEec--CHHHHHHHHHHHHH
Confidence 998855689887433 56688898888765
No 419
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=44.89 E-value=12 Score=41.67 Aligned_cols=33 Identities=36% Similarity=0.567 Sum_probs=27.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|||+|+|.||+..|..+.. .| .++.++|+..
T Consensus 374 ~~vvIIGgG~AGl~aA~~l~~-----~g-------~~V~lie~~~ 406 (671)
T 1ps9_A 374 KNLAVVGAGPAGLAFAINAAA-----RG-------HQVTLFDAHS 406 (671)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCCC
Confidence 789999999999999888754 34 3699999864
No 420
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=44.75 E-value=6.4 Score=41.18 Aligned_cols=34 Identities=24% Similarity=0.405 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
.+|+|+|||.||+..|..|.. .|+ ++.++|++-.
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~-----~G~-------~V~vlE~~~~ 40 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSR-----RGL-------KILLVDSKPW 40 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSS-----SSC-------CEEEECSSCG
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCCC
Confidence 579999999999999887753 454 5778887643
No 421
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=44.72 E-value=13 Score=35.21 Aligned_cols=91 Identities=16% Similarity=0.191 Sum_probs=55.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
.||.|+|+|..|..+|..+.. .|. +++++|++- +....++... . ...++.++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~-----~g~-------~V~~~~r~~----------~~~~~~~~~g--~----~~~~~~~~ 80 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVG-----SGF-------KVVVGSRNP----------KRTARLFPSA--A----QVTFQEEA 80 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSH----------HHHHHHSBTT--S----EEEEHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----------HHHHHHHHcC--C----ceecHHHH
Confidence 789999999999999888764 342 588888741 0111121111 0 11268888
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 402 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 402 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
++. +|++|=+ ..+. ..+++++ ++. ..+.-+|.-+||+.+
T Consensus 81 ~~~--~DvVi~a-v~~~-~~~~v~~-l~~-~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 81 VSS--PEVIFVA-VFRE-HYSSLCS-LSD-QLAGKILVDVSNPTE 119 (215)
T ss_dssp TTS--CSEEEEC-SCGG-GSGGGGG-GHH-HHTTCEEEECCCCCH
T ss_pred HhC--CCEEEEC-CChH-HHHHHHH-HHH-hcCCCEEEEeCCCcc
Confidence 876 7988833 3333 3455554 322 225668888999875
No 422
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=44.58 E-value=22 Score=34.11 Aligned_cols=98 Identities=15% Similarity=0.155 Sum_probs=54.5
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 323 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 323 riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
||+|.|| |-.|..+++.|.+ +.| .+++.++++.- .-..+.+....+.+- ++ .+..+|.++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~----~~g-------~~V~~~~R~~~---~~~~~~~~~v~~~~~--D~---~d~~~l~~~ 62 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIA----NHI-------DHFHIGVRNVE---KVPDDWRGKVSVRQL--DY---FNQESMVEA 62 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHH----TTC-------TTEEEEESSGG---GSCGGGBTTBEEEEC--CT---TCHHHHHHH
T ss_pred EEEEEcCCchHHHHHHHHHhh----CCC-------CcEEEEECCHH---HHHHhhhCCCEEEEc--CC---CCHHHHHHH
Confidence 6899997 7777777776443 114 35777777521 001111111122111 11 123468888
Q ss_pred hcccCCcEEEeecCCCCC------CCHHHHHHhhhcCCCCCeEEecC
Q 007499 402 VRKVKPHVLLGLSGVGGV------FNEEVLKAMRESDSVKPAIFAMS 442 (601)
Q Consensus 402 V~~vkptvLIG~S~~~g~------Ft~evv~~Ma~~~~erPIIFaLS 442 (601)
++. .|++|=+++.... -++.++++|.+ ..-+.|||.=|
T Consensus 63 ~~~--~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~-~gv~~iv~~Ss 106 (289)
T 3e48_A 63 FKG--MDTVVFIPSIIHPSFKRIPEVENLVYAAKQ-SGVAHIIFIGY 106 (289)
T ss_dssp TTT--CSEEEECCCCCCSHHHHHHHHHHHHHHHHH-TTCCEEEEEEE
T ss_pred HhC--CCEEEEeCCCCccchhhHHHHHHHHHHHHH-cCCCEEEEEcc
Confidence 886 7999987764322 24678888854 44456777433
No 423
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=44.54 E-value=17 Score=35.01 Aligned_cols=99 Identities=14% Similarity=0.158 Sum_probs=54.6
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.+|+|.|| |-.|..+++.|++. ..| .+++.+|++. ....+. .+..+..- ++ .+..++.+
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~~-~~~~~~~~--D~---~d~~~~~~ 62 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKL---YGT-------ENVIASDIRK----LNTDVV-NSGPFEVV--NA---LDFNQIEH 62 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHH---HCG-------GGEEEEESCC----CSCHHH-HSSCEEEC--CT---TCHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHh---CCC-------CEEEEEcCCC----cccccc-CCCceEEe--cC---CCHHHHHH
Confidence 67999998 77777777777653 012 2688888741 111010 01111111 11 12245788
Q ss_pred HhcccCCcEEEeecCCCCC---------------CCHHHHHHhhhcCCCCCeEEec
Q 007499 401 VVRKVKPHVLLGLSGVGGV---------------FNEEVLKAMRESDSVKPAIFAM 441 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~g~---------------Ft~evv~~Ma~~~~erPIIFaL 441 (601)
+++..++|++|=+.+.... -|..+++++.+ ..-+.+||.=
T Consensus 63 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~S 117 (312)
T 2yy7_A 63 LVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKA-KKIKKIFWPS 117 (312)
T ss_dssp HHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHT-TSCSEEECCE
T ss_pred HHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHH-cCCCEEEEec
Confidence 8887789999988764321 13356676643 3335677743
No 424
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=44.41 E-value=13 Score=37.90 Aligned_cols=35 Identities=29% Similarity=0.476 Sum_probs=27.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccc
Q 007499 321 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 368 (601)
Q Consensus 321 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 368 (601)
..++||+|+|.||+..|..+.+ .| ++.++|+.-..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~-----~g--------~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQ-----TY--------EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTT-----TS--------EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhh-----cC--------CEEEEECCCCC
Confidence 3689999999999999888743 23 79999987543
No 425
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=44.25 E-value=14 Score=38.80 Aligned_cols=32 Identities=31% Similarity=0.490 Sum_probs=25.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.||+..|..|.+. |. ++.++++.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~-----g~-------~v~v~E~~ 71 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVA-----GF-------KTLLLEAR 71 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------CEEEEeCC
Confidence 5899999999999999888753 43 46666664
No 426
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=44.15 E-value=11 Score=40.32 Aligned_cols=32 Identities=22% Similarity=0.409 Sum_probs=25.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~-----G~-------~V~l~D~~ 69 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARV-----GI-------SVVAVESD 69 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999988653 43 57888864
No 427
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=44.09 E-value=29 Score=35.27 Aligned_cols=32 Identities=19% Similarity=0.340 Sum_probs=21.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
++|+|+|||+.|...+.+... .|. ++|+.+|+
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 224 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKA-----AGA------SRIIGVGT 224 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 799999998777665544432 242 46888875
No 428
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=44.07 E-value=29 Score=35.19 Aligned_cols=32 Identities=28% Similarity=0.392 Sum_probs=21.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 192 ~~VlV~GaG~vG~~avqla~~-----~Ga------~~Vi~~~~ 223 (373)
T 2fzw_A 192 SVCAVFGLGGVGLAVIMGCKV-----AGA------SRIIGVDI 223 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 799999998777665544432 243 46888875
No 429
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=44.06 E-value=29 Score=35.57 Aligned_cols=48 Identities=23% Similarity=0.258 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 302 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 302 LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
++..+.|++..+.+ .. ++|+|+|||..|...+.+... .|. ++|+.+|+
T Consensus 171 ~~ta~~al~~~~~~-~g---~~VlV~GaG~vG~~aiqlAk~-----~Ga------~~Vi~~~~ 218 (398)
T 1kol_A 171 LPTGYHGAVTAGVG-PG---STVYVAGAGPVGLAAAASARL-----LGA------AVVIVGDL 218 (398)
T ss_dssp HHHHHHHHHHTTCC-TT---CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred HHHHHHHHHHcCCC-CC---CEEEEECCcHHHHHHHHHHHH-----CCC------CeEEEEcC
Confidence 44456666644433 34 799999998777655444332 353 46888876
No 430
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=44.03 E-value=12 Score=39.29 Aligned_cols=32 Identities=25% Similarity=0.445 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
-.|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 6 ~DVvVIGaG~aGl~aA~~la~-----~G~-------~V~liEk~ 37 (463)
T 4dna_A 6 YDLFVIGGGSGGVRSGRLAAA-----LGK-------KVAIAEEF 37 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CcEEEECcCHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 579999999999999887754 353 68999984
No 431
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=43.98 E-value=15 Score=39.27 Aligned_cols=31 Identities=35% Similarity=0.474 Sum_probs=25.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEe
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD 363 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD 363 (601)
.+|+|+|||.||+..|..+.+. .| .++.++|
T Consensus 8 ~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 38 (495)
T 2wpf_A 8 FDLVVIGAGSGGLEAGWNAATL----YG-------KRVAVVD 38 (495)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred cCEEEECCChhHHHHHHHHHHh----cC-------CeEEEEe
Confidence 6899999999999999888751 24 3699999
No 432
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=43.96 E-value=18 Score=34.72 Aligned_cols=86 Identities=22% Similarity=0.311 Sum_probs=52.4
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 323 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 323 riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
||+|.|| |-.|..+++.|+ . | -+++.+|++.-. +.-+- .+..++.++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-----g-------~~V~~~~r~~~~-------------~~~D~------~d~~~~~~~ 49 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-----V-------GNLIALDVHSKE-------------FCGDF------SNPKGVAET 49 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-----T-------SEEEEECTTCSS-------------SCCCT------TCHHHHHHH
T ss_pred eEEEECCCCHHHHHHHHHhh-c-----C-------CeEEEecccccc-------------ccccC------CCHHHHHHH
Confidence 7899998 777777766655 2 3 368888875310 10010 112357888
Q ss_pred hcccCCcEEEeecCCCCC----------------CCHHHHHHhhhcCCCCCeEEecC
Q 007499 402 VRKVKPHVLLGLSGVGGV----------------FNEEVLKAMRESDSVKPAIFAMS 442 (601)
Q Consensus 402 V~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~~erPIIFaLS 442 (601)
++..++|++|=+.+.... .+..+++++.+ ..- .+||.=|
T Consensus 50 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~-~~v~~SS 104 (299)
T 1n2s_A 50 VRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANE-TGA-WVVHYST 104 (299)
T ss_dssp HHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTT-TTC-EEEEEEE
T ss_pred HHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHH-cCC-cEEEEec
Confidence 888789999988765431 14567777643 333 4887544
No 433
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=43.75 E-value=35 Score=34.57 Aligned_cols=46 Identities=17% Similarity=0.263 Sum_probs=28.9
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 304 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 304 gll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
..+.+++..+.+... ++|+|+|||..|...+.+... .| -+++.+|+
T Consensus 167 ta~~~l~~~~~~~~g---~~VlV~GaG~vG~~a~qlak~-----~G-------a~Vi~~~~ 212 (357)
T 2cf5_A 167 TVYSPLSHFGLKQPG---LRGGILGLGGVGHMGVKIAKA-----MG-------HHVTVISS 212 (357)
T ss_dssp HHHHHHHHTSTTSTT---CEEEEECCSHHHHHHHHHHHH-----HT-------CEEEEEES
T ss_pred HHHHHHHhcCCCCCC---CEEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeC
Confidence 344566655544245 799999998777666544432 24 26888876
No 434
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=43.66 E-value=14 Score=37.47 Aligned_cols=32 Identities=28% Similarity=0.449 Sum_probs=26.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 321 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 321 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
..+|.|+|+|..|-|||..+. + |. +++++|+.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a-----G~-------~V~v~d~~ 43 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S-----KH-------EVVLQDVS 43 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T-----TS-------EEEEECSC
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c-----CC-------EEEEEECC
Confidence 378999999999999999988 6 32 57777763
No 435
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=43.48 E-value=12 Score=44.12 Aligned_cols=33 Identities=24% Similarity=0.500 Sum_probs=27.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|+|.||+..|..|.. .|. +++.++|++
T Consensus 188 ~~VvVIGgGpAGl~aA~~L~~-----~G~------~~Vtv~E~~ 220 (1025)
T 1gte_A 188 AKIALLGAGPASISCASFLAR-----LGY------SDITIFEKQ 220 (1025)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESS
T ss_pred CEEEEECccHHHHHHHHHHHh-----cCC------CcEEEEeCC
Confidence 689999999999999998865 353 258899986
No 436
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=43.46 E-value=12 Score=36.99 Aligned_cols=100 Identities=13% Similarity=0.092 Sum_probs=56.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
.||.|+|+|+-|..+|..|..+ | .+++++|+.- + .+. ..+...... ..-..+..++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~-----g-------~~V~~~~r~~----~--~~~-----~~~~~g~~~-~~~~~~~~~~ 58 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS-----L-------PHTTLIGRHA----K--TIT-----YYTVPHAPA-QDIVVKGYED 58 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-----C-------TTCEEEESSC----E--EEE-----EESSTTSCC-EEEEEEEGGG
T ss_pred cEEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEEecc----C--cEE-----EEecCCeec-cceecCchHh
Confidence 5899999999999999888754 4 2577777641 0 010 000000000 0000112233
Q ss_pred h-cccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccC
Q 007499 402 V-RKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAE 449 (601)
Q Consensus 402 V-~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~~aE 449 (601)
+ + .+|++| ++.. ...++++++.++....+..+|..+.|-....|
T Consensus 59 ~~~--~~D~vi-lavk-~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~ 103 (294)
T 3g17_A 59 VTN--TFDVII-IAVK-THQLDAVIPHLTYLAHEDTLIILAQNGYGQLE 103 (294)
T ss_dssp CCS--CEEEEE-ECSC-GGGHHHHGGGHHHHEEEEEEEEECCSSCCCGG
T ss_pred cCC--CCCEEE-EeCC-ccCHHHHHHHHHHhhCCCCEEEEeccCcccHh
Confidence 2 2 267766 4443 33568888888543445668889999876544
No 437
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=43.44 E-value=16 Score=38.77 Aligned_cols=31 Identities=32% Similarity=0.429 Sum_probs=25.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEe
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD 363 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD 363 (601)
.+|+|+|||.||+..|..+.+. .| .++.++|
T Consensus 4 ~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 34 (490)
T 1fec_A 4 YDLVVIGAGSGGLEAGWNAASL----HK-------KRVAVID 34 (490)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred ccEEEECCCHHHHHHHHHHHHH----cC-------CEEEEEe
Confidence 6899999999999999888651 24 3699999
No 438
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=43.30 E-value=24 Score=35.19 Aligned_cols=50 Identities=14% Similarity=0.001 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 300 VALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 300 v~LAgll~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
+.++..+.|+.....--.. ++++|.|| |..|..+++++.. .| -+++.+|+
T Consensus 138 ~~~~ta~~al~~~~~~~~g---~~vlI~Ga~g~iG~~~~~~a~~-----~G-------~~V~~~~~ 188 (345)
T 2j3h_A 138 MPGMTAYAGFYEVCSPKEG---ETVYVSAASGAVGQLVGQLAKM-----MG-------CYVVGSAG 188 (345)
T ss_dssp HHHHHHHHHHHTTSCCCTT---CEEEESSTTSHHHHHHHHHHHH-----TT-------CEEEEEES
T ss_pred ccHHHHHHHHHHHhCCCCC---CEEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeC
Confidence 3445555666333332234 79999997 8777666655443 34 26888876
No 439
>3lup_A DEGV family protein; PSI-2, MCSG, structural genomics, fatty acid binding, protei structure initiative; HET: ELA; 2.65A {Streptococcus agalactiae} SCOP: c.119.1.0
Probab=43.30 E-value=6.9 Score=39.58 Aligned_cols=134 Identities=13% Similarity=0.080 Sum_probs=76.3
Q ss_pred eeEEEEecCccccccCCCCCccccccchhhhHHHhhcCCCCCceecEEeeccCCchhcccCccccccccCCCChhhhhHh
Q 007499 172 VDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSI 251 (601)
Q Consensus 172 v~viVVTDG~rILGLGDlG~~Gm~I~iGKl~LY~a~gGI~P~~~lPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~ 251 (601)
.++.||||.+.=|--...-- -||. .+|+.+-+| ++..+++ . +--
T Consensus 4 Mki~IvtDSt~dl~~e~~~~----------------~~I~---vvPl~v~~~--~~~y~D~-------------~--di~ 47 (285)
T 3lup_A 4 MKLALITDTSAYLPEAIENH----------------EDVY---VLDIPIIID--GKTYIEG-------------Q--NLT 47 (285)
T ss_dssp CCEEEEEETTBCCCTTTTTC----------------TTEE---EECCCEESS--SSCCCBT-------------T--TBC
T ss_pred CCEEEEEECCCCCCHHHHHH----------------CCeE---EEEEEEEEC--CEEEecC-------------C--CCC
Confidence 46899999987654222111 1444 677777664 3333332 1 123
Q ss_pred HHHHHHHHHH--hCCCeEEeeCCCChHHHHHHHHhc-------cC--CccccCcchhHHHHHHHHHHHHHHhCCCCCCCC
Q 007499 252 VDEFMEAVHA--RWPKAIFEDFQMKWAFETLERYRK-------RF--CMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFA 320 (601)
Q Consensus 252 vdefv~av~~--~~P~~l~EDf~~~~Af~iL~ryr~-------~~--~~FnDDiQGTaav~LAgll~Alr~~g~~l~dl~ 320 (601)
.+||.+.+++ ..|+. |.|+--++++-|++ .+ -++..-+=||=-.+ +.......+
T Consensus 48 ~~efy~~~~~~~~~p~T-----Sqps~~~~~~~f~~l~~~g~d~ii~i~iSs~LSGTy~sA--------~~a~~~~~~-- 112 (285)
T 3lup_A 48 LDQYYDKLAASKELPKT-----SQPSLAELDDLLCQLEKEGYTHVLGLFIAAGISGFWQNI--------QFLIEEHPN-- 112 (285)
T ss_dssp HHHHHHHHHHCSSCCEE-----CCCCHHHHHHHHHHHHHTTCCEEEECCSCGGGCTHHHHH--------TTHHHHCTT--
T ss_pred HHHHHHHHHhCCCCcee-----CCCCHHHHHHHHHHHHHcCCCeEEEEeCCCchhHHHHHH--------HHHHHhCCC--
Confidence 6888888875 35754 44444444444431 22 24445555553322 211123445
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHH-HhcCCChhhhcC
Q 007499 321 DQKIVVVGAGSAGLGVLKMAVQAAA-RMAGNNDAFARN 357 (601)
Q Consensus 321 ~~riv~~GAGsAg~GiA~ll~~~~~-~~~Gls~eeA~~ 357 (601)
.+|-++=..+++.|.+-++..+.. .++|.|.+|..+
T Consensus 113 -~~I~ViDS~~~s~g~g~~v~~A~~l~~~G~s~eeI~~ 149 (285)
T 3lup_A 113 -LTIAFPDTKITSAPQGNLVRNALMCSREGMDFDVIVN 149 (285)
T ss_dssp -SEEECCCCCCCHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred -CCEEEEcCCchHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 789999998888888877776532 268999887543
No 440
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=43.24 E-value=11 Score=38.31 Aligned_cols=34 Identities=18% Similarity=0.431 Sum_probs=25.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|||+|||.||+..|..+.+ .|.+ -+|.++|++
T Consensus 5 ~dvvIIG~G~aGl~aA~~l~~-----~g~~-----~~V~lie~~ 38 (384)
T 2v3a_A 5 APLVIIGTGLAGYNLAREWRK-----LDGE-----TPLLMITAD 38 (384)
T ss_dssp CCEEEECCSHHHHHHHHHHHT-----TCSS-----SCEEEECSS
T ss_pred CcEEEECChHHHHHHHHHHHh-----hCCC-----CCEEEEECC
Confidence 679999999999999887754 3532 257788764
No 441
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=42.94 E-value=17 Score=35.30 Aligned_cols=35 Identities=20% Similarity=0.402 Sum_probs=23.2
Q ss_pred CCCceEEEeCcch---HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 319 FADQKIVVVGAGS---AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 319 l~~~riv~~GAGs---Ag~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
|+++++||-||++ .|.+||+.+. ++| -+++++|++
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la-----~~G-------a~Vvi~~r~ 41 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLD-----QLG-------AKLVFTYRK 41 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHH-----HTT-------CEEEEEESS
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHH-----HCC-------CEEEEEECC
Confidence 4459999999853 3444555544 356 379999885
No 442
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=42.91 E-value=16 Score=34.90 Aligned_cols=32 Identities=16% Similarity=0.423 Sum_probs=25.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
||.|+|+|..|..+|..|... |. .+++++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQ-----GG------YRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----CS------CEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHC-----CC------CeEEEECCC
Confidence 799999999999999888653 42 368888874
No 443
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=42.87 E-value=33 Score=34.01 Aligned_cols=51 Identities=18% Similarity=0.086 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCceEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 300 VALAGLLGTVRAQGLSLTDFADQKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 300 v~LAgll~Alr~~g~~l~dl~~~riv~~G-AGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
+.++..+.+++....--.. ++++|.| +|..|..+++++.. .| -+++.+|++
T Consensus 123 ~~~~ta~~al~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~a~~-----~G-------~~V~~~~~~ 174 (327)
T 1qor_A 123 LKGLTVYYLLRKTYEIKPD---EQFLFHAAAGGVGLIACQWAKA-----LG-------AKLIGTVGT 174 (327)
T ss_dssp HHHHHHHHHHHTTSCCCTT---CEEEESSTTBHHHHHHHHHHHH-----HT-------CEEEEEESS
T ss_pred hHHHHHHHHHHHhhCCCCC---CEEEEECCCCHHHHHHHHHHHH-----cC-------CEEEEEeCC
Confidence 3444555666533332234 7999999 57777766665543 34 268888763
No 444
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=42.76 E-value=27 Score=36.07 Aligned_cols=32 Identities=28% Similarity=0.576 Sum_probs=21.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
++|+|+|||+.|...+.+.. ..|. ++++.+|+
T Consensus 215 ~~VlV~GaG~vG~~aiqlak-----~~Ga------~~Vi~~~~ 246 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILK-----HAGA------SKVILSEP 246 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHH-----HTTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHH-----HcCC------CEEEEECC
Confidence 79999999876655443332 2453 47887775
No 445
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=42.50 E-value=16 Score=38.56 Aligned_cols=33 Identities=24% Similarity=0.450 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
-+|+|+|||.+|+..|..+.. .| .++.++|+..
T Consensus 30 ~dv~IIGaG~aGl~aA~~l~~-----~g-------~~v~v~E~~~ 62 (397)
T 3hdq_A 30 FDYLIVGAGFAGSVLAERLAS-----SG-------QRVLIVDRRP 62 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHH-----CC-------CceEEEeccC
Confidence 689999999999999987754 34 3688898853
No 446
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=42.21 E-value=35 Score=34.22 Aligned_cols=32 Identities=16% Similarity=0.367 Sum_probs=20.1
Q ss_pred HHHHHHHh----CCCCCCCCCceEEEeCcchHHHHHHHHH
Q 007499 305 LLGTVRAQ----GLSLTDFADQKIVVVGAGSAGLGVLKMA 340 (601)
Q Consensus 305 ll~Alr~~----g~~l~dl~~~riv~~GAGsAg~GiA~ll 340 (601)
.+.|++.. +.- .. ++|+|+|||..|...+.+.
T Consensus 155 a~~al~~~~~~~~~~-~g---~~VlV~GaG~vG~~aiqla 190 (344)
T 2h6e_A 155 SMGAIRQALPFISKF-AE---PVVIVNGIGGLAVYTIQIL 190 (344)
T ss_dssp HHHHHHHHHHHHTTC-SS---CEEEEECCSHHHHHHHHHH
T ss_pred HHHHHHhhhhcccCC-CC---CEEEEECCCHHHHHHHHHH
Confidence 35555554 233 56 8999999986665554433
No 447
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=42.01 E-value=54 Score=32.84 Aligned_cols=90 Identities=18% Similarity=0.116 Sum_probs=49.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 401 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 401 (601)
.||.|+|+|..|...++.|.. ..+. +-+.++|++- +..+.+++.-. .....++.|+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~----~~~~------~l~av~d~~~----------~~~~~~a~~~g----~~~~~~~~~~ 60 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAA----NPDL------ELVVIADPFI----------EGAQRLAEANG----AEAVASPDEV 60 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHH----CTTE------EEEEEECSSH----------HHHHHHHHTTT----CEEESSHHHH
T ss_pred eEEEEECCcHHHHHHHHHHHh----CCCc------EEEEEECCCH----------HHHHHHHHHcC----CceeCCHHHH
Confidence 699999999988766655433 1121 1233666631 11123333211 1134789999
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEE
Q 007499 402 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIF 439 (601)
Q Consensus 402 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIF 439 (601)
++.-++|+++ +++ |.....++++...+ ..++|+.
T Consensus 61 l~~~~~D~V~-i~t-p~~~h~~~~~~al~--~gk~v~~ 94 (344)
T 3euw_A 61 FARDDIDGIV-IGS-PTSTHVDLITRAVE--RGIPALC 94 (344)
T ss_dssp TTCSCCCEEE-ECS-CGGGHHHHHHHHHH--TTCCEEE
T ss_pred hcCCCCCEEE-EeC-CchhhHHHHHHHHH--cCCcEEE
Confidence 9977789887 444 44455555555433 2355553
No 448
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=41.84 E-value=43 Score=33.01 Aligned_cols=104 Identities=14% Similarity=0.275 Sum_probs=55.5
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCCh-hhhccccccCCCCCcccCC
Q 007499 319 FADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP-AAAPFAKDPGDFMGLREGA 396 (601)
Q Consensus 319 l~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~-~k~~fa~~~~~~~~~~~~~ 396 (601)
+...+|+|.|| |-.|..+++.|++ .| -+++.+|++.- .....+.. .+..+..- ++ .+..
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~--~~~~~l~~~~~~~~~~~--Dl---~d~~ 79 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLE-----RG-------DKVVGIDNFAT--GRREHLKDHPNLTFVEG--SI---ADHA 79 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS--CCGGGSCCCTTEEEEEC--CT---TCHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHH-----CC-------CEEEEEECCCc--cchhhHhhcCCceEEEE--eC---CCHH
Confidence 44489999996 6666666655543 34 36888887521 00011111 01111111 11 1224
Q ss_pred CHHHHhcccCCcEEEeecCCCCC--C-----------CHHHHHHhhhcCCCCCeEEecC
Q 007499 397 SLLEVVRKVKPHVLLGLSGVGGV--F-----------NEEVLKAMRESDSVKPAIFAMS 442 (601)
Q Consensus 397 ~L~e~V~~vkptvLIG~S~~~g~--F-----------t~evv~~Ma~~~~erPIIFaLS 442 (601)
++.++++..++|++|=+.+.... . +..+++++.+ ..-+.|||.=|
T Consensus 80 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~-~~~~~iV~~SS 137 (333)
T 2q1w_A 80 LVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKK-NNVGRFVYFQT 137 (333)
T ss_dssp HHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHH-TTCSEEEEEEE
T ss_pred HHHHHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHH-hCCCEEEEECc
Confidence 57788887789999987764332 1 3456677643 44457887543
No 449
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=41.81 E-value=84 Score=30.33 Aligned_cols=75 Identities=24% Similarity=0.308 Sum_probs=41.3
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCH
Q 007499 319 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 398 (601)
Q Consensus 319 l~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L 398 (601)
+.++++||.||++ ||...|+..+. ++|. +++++|++.- .+......+.-|.. +..++
T Consensus 12 ~~~k~vlVTGas~---GIG~aia~~l~-~~G~-------~V~~~~r~~~------~~~~~~~~~~~Dv~------~~~~v 68 (269)
T 3vtz_A 12 FTDKVAIVTGGSS---GIGLAVVDALV-RYGA-------KVVSVSLDEK------SDVNVSDHFKIDVT------NEEEV 68 (269)
T ss_dssp TTTCEEEESSTTS---HHHHHHHHHHH-HTTC-------EEEEEESCC--------CTTSSEEEECCTT------CHHHH
T ss_pred CCCCEEEEeCCCC---HHHHHHHHHHH-HCCC-------EEEEEeCCch------hccCceeEEEecCC------CHHHH
Confidence 4449999999854 55555666665 4563 6888887521 11111111211211 22345
Q ss_pred HHHhccc-----CCcEEEeecCC
Q 007499 399 LEVVRKV-----KPHVLLGLSGV 416 (601)
Q Consensus 399 ~e~V~~v-----kptvLIG~S~~ 416 (601)
.++++.+ ++|+||=..+.
T Consensus 69 ~~~~~~~~~~~g~iD~lv~nAg~ 91 (269)
T 3vtz_A 69 KEAVEKTTKKYGRIDILVNNAGI 91 (269)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCc
Confidence 6666655 79999976654
No 450
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=41.55 E-value=34 Score=34.64 Aligned_cols=45 Identities=18% Similarity=0.262 Sum_probs=26.7
Q ss_pred HHHHHHHH--hCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhc-CCChhhhcCeEEEEec
Q 007499 304 GLLGTVRA--QGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMA-GNNDAFARNKFFLLDK 364 (601)
Q Consensus 304 gll~Alr~--~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~-Gls~eeA~~~i~lvD~ 364 (601)
..+.+++. .+.+ .. ++|+|+|||..|...+.+.. .. | -+++.+|+
T Consensus 172 ta~~al~~~~~~~~-~g---~~VlV~GaG~vG~~avqlak-----~~~G-------a~Vi~~~~ 219 (359)
T 1h2b_A 172 TAYRAVKKAARTLY-PG---AYVAIVGVGGLGHIAVQLLK-----VMTP-------ATVIALDV 219 (359)
T ss_dssp HHHHHHHHHHTTCC-TT---CEEEEECCSHHHHHHHHHHH-----HHCC-------CEEEEEES
T ss_pred HHHHHHHhhccCCC-CC---CEEEEECCCHHHHHHHHHHH-----HcCC-------CeEEEEeC
Confidence 34556665 3333 34 79999999866554443332 23 4 25888875
No 451
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=41.53 E-value=16 Score=34.90 Aligned_cols=36 Identities=19% Similarity=0.302 Sum_probs=25.3
Q ss_pred CCCCceEEEeCc-ch-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 318 DFADQKIVVVGA-GS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 318 dl~~~riv~~GA-Gs-Ag~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
+|.+++++|.|| |+ .|..+|+.+++ .| -+++++|++
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~-----~G-------~~V~~~~r~ 56 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALL-----EG-------ADVVISDYH 56 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHH-----CC-------CEEEEecCC
Confidence 345599999999 64 66667666654 45 268888875
No 452
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=41.41 E-value=14 Score=38.13 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|+|+|||.+|+..|..|.+ .|.+ .+|.++++..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~-----~G~~-----~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSR-----APCP-----PKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHT-----SSSC-----CEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHh-----CCCC-----CcEEEEeCCC
Confidence 589999999999999988865 3531 1688887743
No 453
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=41.33 E-value=32 Score=34.70 Aligned_cols=57 Identities=18% Similarity=0.208 Sum_probs=33.4
Q ss_pred hhHHHHHHHHHHHH-HHhCCCCCCCCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 296 GTAGVALAGLLGTV-RAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 296 GTaav~LAgll~Al-r~~g~~l~dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
++-.+.++..+.|+ +..+.+... .++++|.|| |..|..++.++.. .|. ++++.+|+.
T Consensus 137 a~l~~~~~ta~~al~~~~~~~~g~--~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~~ 195 (357)
T 2zb4_A 137 GAIGMPGLTSLIGIQEKGHITAGS--NKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICGT 195 (357)
T ss_dssp TTTSHHHHHHHHHHHHHSCCCTTS--CCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HhcccHHHHHHHHHHHhcCCCCCC--ccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeCC
Confidence 33334555556666 444433320 158999998 7777666555443 353 378888873
No 454
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=41.11 E-value=30 Score=34.45 Aligned_cols=55 Identities=20% Similarity=0.091 Sum_probs=32.8
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 296 GTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 296 GTaav~LAgll~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
++-.+.++..+.|+......-.. ++++|.|| |..|..+++++.. .| -+++.+|+.
T Consensus 124 a~l~~~~~ta~~al~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~~~~-----~G-------~~V~~~~~~ 179 (333)
T 1v3u_A 124 GTIGMPGLTAYFGLLEVCGVKGG---ETVLVSAAAGAVGSVVGQIAKL-----KG-------CKVVGAAGS 179 (333)
T ss_dssp TTTSHHHHHHHHHHHTTSCCCSS---CEEEEESTTBHHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred HHhCChHHHHHHHHHHhhCCCCC---CEEEEecCCCcHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 33344455556666433333345 79999998 7777666665543 34 268888763
No 455
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=41.01 E-value=13 Score=38.38 Aligned_cols=35 Identities=26% Similarity=0.523 Sum_probs=27.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 368 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 368 (601)
-||||+|||.||+..|..|. ..| -+|.++|+.--+
T Consensus 10 ~~~vIvGgG~AGl~aA~~L~-----~~~-------~~itlie~~~~~ 44 (385)
T 3klj_A 10 TKILILGAGPAGFSAAKAAL-----GKC-------DDITMINSEKYL 44 (385)
T ss_dssp CSEEEECCSHHHHHHHHHHT-----TTC-------SCEEEECSSSSC
T ss_pred CCEEEEcCcHHHHHHHHHHh-----CCC-------CEEEEEECCCCC
Confidence 68999999999999999881 223 379999886443
No 456
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=40.87 E-value=18 Score=37.41 Aligned_cols=37 Identities=22% Similarity=0.391 Sum_probs=28.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 368 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 368 (601)
.+|+|+|+|.||+..|..+.... .| .++.++|+...+
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~---~g-------~~V~v~e~~~~~ 102 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNR---PD-------LKVCIIESSVAP 102 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHC---TT-------SCEEEECSSSSC
T ss_pred CCEEEECccHHHHHHHHHHHhcC---CC-------CeEEEEecCccc
Confidence 68999999999999998876530 14 368899986544
No 457
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=40.75 E-value=27 Score=38.29 Aligned_cols=37 Identities=35% Similarity=0.475 Sum_probs=27.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhc--CCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMA--GNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~--Gls~eeA~~~i~lvD~~G 366 (601)
-.|||+|||.||+..|-.|.+... +. |+ ++.++++..
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~-~~~~G~-------~V~vlEk~~ 74 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAA-QHEKDL-------RVCLVEKAA 74 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHH-HTTCCC-------CEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhccc-ccCCCC-------cEEEEeCCC
Confidence 469999999999999998877533 22 54 577787653
No 458
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=40.44 E-value=30 Score=35.18 Aligned_cols=32 Identities=25% Similarity=0.404 Sum_probs=21.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 228 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKI-----AGA------SRIIAIDI 228 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 799999998777655444332 343 46888875
No 459
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=40.42 E-value=46 Score=33.03 Aligned_cols=32 Identities=22% Similarity=0.301 Sum_probs=21.4
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|| |..|...+.+... .|. +++.+|+.
T Consensus 152 ~~VlV~Ga~G~vG~~~~q~a~~-----~Ga-------~vi~~~~~ 184 (330)
T 1tt7_A 152 GSVLVTGATGGVGGIAVSMLNK-----RGY-------DVVASTGN 184 (330)
T ss_dssp CCEEEESTTSHHHHHHHHHHHH-----HTC-------CEEEEESS
T ss_pred ceEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 38999998 8887766555433 342 47777763
No 460
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=40.19 E-value=1.2e+02 Score=31.87 Aligned_cols=139 Identities=19% Similarity=0.170 Sum_probs=89.0
Q ss_pred HHHHHHHHHhCCCeE-EeeC---------CCChHHHHHHHHhccCCccc--cCcchhHHHHHHHHHHHHHHhCCC-CCCC
Q 007499 253 DEFMEAVHARWPKAI-FEDF---------QMKWAFETLERYRKRFCMFN--DDIQGTAGVALAGLLGTVRAQGLS-LTDF 319 (601)
Q Consensus 253 defv~av~~~~P~~l-~EDf---------~~~~Af~iL~ryr~~~~~Fn--DDiQGTaav~LAgll~Alr~~g~~-l~dl 319 (601)
..-+. |..+|.+++ ...| ....+.+.+.+| ..+|+.| ||. --+=+||=++.-.+..|.+ ++.
T Consensus 116 ~DTar-vLs~y~D~IviR~~~~~~~~~~~~~~~~~~~lA~~-~~vPVINag~g~--HPtQaLaDl~TI~E~~g~~~l~g- 190 (359)
T 1zq6_A 116 AEVAR-VLGRYVDLIGVRAFPKFVDWSKDREDQVLKSFAKY-SPVPVINMETIT--HPCQELAHALALQEHFGTPDLRG- 190 (359)
T ss_dssp HHHHH-HHHHHCSEEEEECCCCSSCHHHHTTCHHHHHHHHH-CSSCEEESSSSC--CHHHHHHHHHHHHHHHTSSCCTT-
T ss_pred HHHHH-HHHHhCcEEEEeccccccccccccchHHHHHHHHh-CCCCEEeCCCCC--CcHHHHHHHHHHHHHhCCCcccC-
Confidence 33444 345557887 7777 145666677777 4699999 787 6666788888777777764 667
Q ss_pred CCce--EEEeCc----chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC-ccccCCCCCCChhhhccccccCCCCCc
Q 007499 320 ADQK--IVVVGA----GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD-GLITKERKNLDPAAAPFAKDPGDFMGL 392 (601)
Q Consensus 320 ~~~r--iv~~GA----GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~-GLi~~~r~~l~~~k~~fa~~~~~~~~~ 392 (601)
.| |.++|- | --+|+-++.++. +-|+ +|.++-.+ |+.-.. ++-+.-+.+|+.... ..
T Consensus 191 --lkvvva~vGDl~~~~---nrva~Sl~~~~~-~~G~-------~v~~~~P~~~~~~~~--~~~~~~~~~a~~~g~--~v 253 (359)
T 1zq6_A 191 --KKYVLTWTYHPKPLN---TAVANSALTIAT-RMGM-------DVTLLCPTPDYILDE--RYMDWAAQNVAESGG--SL 253 (359)
T ss_dssp --CEEEEEECCCSSCCC---SHHHHHHHHHHH-HTTC-------EEEEECSSGGGCCCH--HHHHHHHHHHHHHSC--EE
T ss_pred --CeeEEEEEecccccc---cchHHHHHHHHH-HcCC-------EEEEEcCccccCCCH--HHHHHHHHHHHHcCC--eE
Confidence 99 888888 5 367777777776 5675 68888888 874220 111111222322100 01
Q ss_pred ccCCCHHHHhcccCCcEEEeecC
Q 007499 393 REGASLLEVVRKVKPHVLLGLSG 415 (601)
Q Consensus 393 ~~~~~L~e~V~~vkptvLIG~S~ 415 (601)
....++.|+|++ .||+.-..=
T Consensus 254 ~~~~d~~eav~~--aDvVyt~~w 274 (359)
T 1zq6_A 254 QVSHDIDSAYAG--ADVVYAKSW 274 (359)
T ss_dssp EEECCHHHHHTT--CSEEEEECC
T ss_pred EEECCHHHHhcC--CCEEEECCc
Confidence 124679999999 799987653
No 461
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=40.08 E-value=23 Score=35.66 Aligned_cols=49 Identities=18% Similarity=0.304 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 301 ALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 301 ~LAgll~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
.++..+.++...+.--.. ++|+|+|| |..|..++.++.. .|. +++.+|+
T Consensus 143 ~~~ta~~~l~~~~~~~~g---~~VlV~Gasg~iG~~~~~~a~~-----~Ga-------~Vi~~~~ 192 (342)
T 4eye_A 143 NYHTMYFAYARRGQLRAG---ETVLVLGAAGGIGTAAIQIAKG-----MGA-------KVIAVVN 192 (342)
T ss_dssp HHHHHHHHHHTTSCCCTT---CEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHHHHHHhcCCCCC---CEEEEECCCCHHHHHHHHHHHH-----cCC-------EEEEEeC
Confidence 344455556333333345 79999998 8777766555443 342 6887776
No 462
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=39.94 E-value=8 Score=41.30 Aligned_cols=32 Identities=25% Similarity=0.474 Sum_probs=25.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
.+|||+|||.||+..|..+... .+|.++|+.-
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-------------~~V~vie~~~ 140 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-------------LTVALIEERG 140 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-------------CCEEEECTTS
T ss_pred CCEEEECccHHHHHHHHHHHhc-------------CCEEEEeCCC
Confidence 5799999999999998877542 3688998764
No 463
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=39.93 E-value=15 Score=38.56 Aligned_cols=35 Identities=20% Similarity=0.319 Sum_probs=28.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 368 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 368 (601)
.+|+|+|||-+|+..|-.|.. .| .++.++|++.-+
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~-----~G-------~~V~vlE~~~~~ 46 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSV-----DG-------KKVLHIDKQDHY 46 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEeCCCCC
Confidence 679999999999999888765 35 468999987544
No 464
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=39.88 E-value=14 Score=35.44 Aligned_cols=34 Identities=18% Similarity=0.380 Sum_probs=21.7
Q ss_pred CCceEEEeCcc---hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 320 ADQKIVVVGAG---SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 320 ~~~riv~~GAG---sAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+.++||.||+ -.|..+|+. +. +.|. +++++|++
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~----l~-~~G~-------~V~~~~r~ 44 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQA----MH-REGA-------ELAFTYQN 44 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHH----HH-HTTC-------EEEEEESS
T ss_pred CCCEEEEECCCCCCCHHHHHHHH----HH-HCCC-------EEEEEcCc
Confidence 34899999985 334444444 44 3452 68888876
No 465
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=39.87 E-value=15 Score=39.88 Aligned_cols=32 Identities=31% Similarity=0.674 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||.|+|+|..|.|||..+..+ |. +++++|++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a-----G~-------~V~l~D~~ 37 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH-----GH-------QVLLYDIS 37 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 6899999999999999988753 53 58888864
No 466
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=39.87 E-value=17 Score=36.77 Aligned_cols=32 Identities=25% Similarity=0.379 Sum_probs=25.0
Q ss_pred ceEEEeCcchHHH-HHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGL-GVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~-GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
+||.|+|.|-+|+ ++|+++.+ .|. ++...|++
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~-----~G~-------~V~~~D~~ 37 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKE-----AGF-------EVSGCDAK 37 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred cEEEEEEECHHHHHHHHHHHHh-----CCC-------EEEEEcCC
Confidence 6899999999999 58887765 342 57777774
No 467
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=39.82 E-value=14 Score=39.46 Aligned_cols=32 Identities=25% Similarity=0.611 Sum_probs=25.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
..|+|+|||.||+..|..+.+ .|+ ++.++|++
T Consensus 9 ~DvvVIGgG~aGl~aA~~la~-----~G~-------~V~liE~~ 40 (492)
T 3ic9_A 9 VDVAIIGTGTAGMGAYRAAKK-----HTD-------KVVLIEGG 40 (492)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TCS-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEeCC
Confidence 479999999999998877654 353 68999985
No 468
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=39.73 E-value=20 Score=38.90 Aligned_cols=35 Identities=40% Similarity=0.595 Sum_probs=28.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 368 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 368 (601)
-.|||+|+|.||+..|-.+.+ .|. ++.++++...+
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~-----~G~-------~V~vlEk~~~~ 156 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKK-----AGA-------NVILVDKAPFS 156 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----HTC-------CEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------cEEEEeCCCCC
Confidence 679999999999999877764 353 68999987654
No 469
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=39.68 E-value=16 Score=39.65 Aligned_cols=31 Identities=39% Similarity=0.547 Sum_probs=25.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
.+|+|+|||.||+..|..+.+ .|+ ++.++|+
T Consensus 108 ~dvvVIG~GpAGl~aA~~l~~-----~g~-------~v~liE~ 138 (598)
T 2x8g_A 108 YDLIVIGGGSGGLAAGKEAAK-----YGA-------KTAVLDY 138 (598)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECC
T ss_pred ccEEEECCCccHHHHHHHHHh-----CCC-------eEEEEec
Confidence 789999999999999988765 343 6888985
No 470
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=39.62 E-value=13 Score=37.97 Aligned_cols=32 Identities=19% Similarity=0.329 Sum_probs=25.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
-+|+|+|||.+|+..|..+.+ .| .++.++++.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~-----~g-------~~v~v~E~~ 33 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKK-----LN-------KKVLVIEKR 33 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGG-----GT-------CCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CC-------CcEEEEecC
Confidence 579999999999999887764 24 358888875
No 471
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=39.54 E-value=19 Score=38.52 Aligned_cols=25 Identities=20% Similarity=0.449 Sum_probs=21.9
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHH
Q 007499 319 FADQKIVVVGAGSAGLGVLKMAVQA 343 (601)
Q Consensus 319 l~~~riv~~GAGsAg~GiA~ll~~~ 343 (601)
|.+++|||+|+|..|..-+++|+++
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ 34 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEA 34 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC
Confidence 3449999999999999999999875
No 472
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=39.53 E-value=32 Score=34.96 Aligned_cols=32 Identities=28% Similarity=0.411 Sum_probs=21.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
++|+|+|||..|...+.+... .|. ++|+.+|+
T Consensus 193 ~~VlV~GaG~vG~~a~qla~~-----~Ga------~~Vi~~~~ 224 (374)
T 2jhf_A 193 STCAVFGLGGVGLSVIMGCKA-----AGA------ARIIGVDI 224 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 799999998776655444332 343 46888875
No 473
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=39.52 E-value=16 Score=41.70 Aligned_cols=35 Identities=34% Similarity=0.546 Sum_probs=28.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
.+|+|+|||.+|+.+|..|.+ .|. .++.++|+..+
T Consensus 5 ~dVvIIGgGi~Gls~A~~La~-----~G~------~~V~vlE~~~~ 39 (830)
T 1pj5_A 5 PRIVIIGAGIVGTNLADELVT-----RGW------NNITVLDQGPL 39 (830)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSCT
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC------CcEEEEeCCCC
Confidence 679999999999999988765 353 36999998754
No 474
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=39.42 E-value=27 Score=34.23 Aligned_cols=102 Identities=20% Similarity=0.232 Sum_probs=55.0
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccc---cccCCC-CC-cccC
Q 007499 322 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA---KDPGDF-MG-LREG 395 (601)
Q Consensus 322 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa---~~~~~~-~~-~~~~ 395 (601)
.+|+|.|| |-.|..+++.|++ .| -+++++|+.. .........+. .....+ .. ..+.
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 67 (341)
T 3enk_A 6 GTILVTGGAGYIGSHTAVELLA-----HG-------YDVVIADNLV------NSKREAIARIEKITGKTPAFHETDVSDE 67 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCS------SSCTHHHHHHHHHHSCCCEEECCCTTCH
T ss_pred cEEEEecCCcHHHHHHHHHHHH-----CC-------CcEEEEecCC------cchHHHHHHHHhhcCCCceEEEeecCCH
Confidence 68999996 5555555555543 45 3688887741 11221111110 000000 00 1123
Q ss_pred CCHHHHhcccCCcEEEeecCCCCC----------------CCHHHHHHhhhcCCCCCeEEecC
Q 007499 396 ASLLEVVRKVKPHVLLGLSGVGGV----------------FNEEVLKAMRESDSVKPAIFAMS 442 (601)
Q Consensus 396 ~~L~e~V~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~~erPIIFaLS 442 (601)
.++.++++..++|++|=+.+.... -+..+++.|.+ ..-+.|||.=|
T Consensus 68 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~iv~~SS 129 (341)
T 3enk_A 68 RALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRE-RAVKRIVFSSS 129 (341)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCEEEEEEE
T ss_pred HHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHh-CCCCEEEEEec
Confidence 457888887789999977764321 13457788854 44467888544
No 475
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=39.38 E-value=22 Score=40.85 Aligned_cols=34 Identities=26% Similarity=0.498 Sum_probs=27.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCcc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 367 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GL 367 (601)
.+|+|+|||.||+..|..|... |. ++.++++..-
T Consensus 337 ~~v~viG~G~~Gl~aA~~l~~~-----g~-------~v~v~E~~~~ 370 (776)
T 4gut_A 337 KSVIIIGAGPAGLAAARQLHNF-----GI-------KVTVLEAKDR 370 (776)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEecccc
Confidence 6899999999999999888764 42 6888887543
No 476
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=39.19 E-value=11 Score=41.46 Aligned_cols=32 Identities=22% Similarity=0.379 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.+|+|+|||.||+..|..|.+ .|+ ++.++|+.
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~-----~G~-------kV~VlEr~ 139 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQ-----MGF-------NPIIVERG 139 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHH-----TTC-------CCEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEEcc
Confidence 679999999999999987764 454 57788876
No 477
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=39.10 E-value=16 Score=40.83 Aligned_cols=38 Identities=26% Similarity=0.406 Sum_probs=27.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
..|+|+|||.+|+..|-.|.....+..|+ ++.++|++.
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~Gi-------~v~viE~~~ 46 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPDL-------KVRIIDKRS 46 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTC-------CEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCCC-------CEEEEeCCC
Confidence 57999999999999988876521111465 578888753
No 478
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=39.05 E-value=31 Score=31.76 Aligned_cols=93 Identities=18% Similarity=0.247 Sum_probs=48.3
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCccc-CCCHHH
Q 007499 323 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE-GASLLE 400 (601)
Q Consensus 323 riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~-~~~L~e 400 (601)
||+|.|| |-.|..+++.| . +.| -+++.++++.- ....+ .+..+.+- ++ .+ ..++.+
T Consensus 2 ~ilItGatG~iG~~l~~~L----~-~~g-------~~V~~~~R~~~---~~~~~--~~~~~~~~--D~---~d~~~~~~~ 59 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSL----S-TTD-------YQIYAGARKVE---QVPQY--NNVKAVHF--DV---DWTPEEMAK 59 (219)
T ss_dssp EEEEESTTSHHHHHHHHHH----T-TSS-------CEEEEEESSGG---GSCCC--TTEEEEEC--CT---TSCHHHHHT
T ss_pred eEEEECCCCHHHHHHHHHH----H-HCC-------CEEEEEECCcc---chhhc--CCceEEEe--cc---cCCHHHHHH
Confidence 7899995 55555554444 3 345 36888888631 11111 11112111 11 12 235777
Q ss_pred HhcccCCcEEEeecCCCCC--------CCHHHHHHhhhcCCCCCeEEe
Q 007499 401 VVRKVKPHVLLGLSGVGGV--------FNEEVLKAMRESDSVKPAIFA 440 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~g~--------Ft~evv~~Ma~~~~erPIIFa 440 (601)
+++. +|++|=+.+.... -+..++++|.+ ..-+.|||.
T Consensus 60 ~~~~--~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~-~~~~~iv~~ 104 (219)
T 3dqp_A 60 QLHG--MDAIINVSGSGGKSLLKVDLYGAVKLMQAAEK-AEVKRFILL 104 (219)
T ss_dssp TTTT--CSEEEECCCCTTSSCCCCCCHHHHHHHHHHHH-TTCCEEEEE
T ss_pred HHcC--CCEEEECCcCCCCCcEeEeHHHHHHHHHHHHH-hCCCEEEEE
Confidence 7775 8999977764321 14567777743 333445553
No 479
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=38.73 E-value=46 Score=32.63 Aligned_cols=48 Identities=15% Similarity=0.243 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 301 ALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 301 ~LAgll~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
.++..+.+++..+ --.. ++|+|.|| |..|..++.++.. .| -+++.+|+
T Consensus 110 ~~~ta~~~l~~~~-~~~g---~~vlV~Ga~G~vG~~~~~~a~~-----~G-------a~Vi~~~~ 158 (302)
T 1iz0_A 110 SFLTAYLALKRAQ-ARPG---EKVLVQAAAGALGTAAVQVARA-----MG-------LRVLAAAS 158 (302)
T ss_dssp HHHHHHHHHHHTT-CCTT---CEEEESSTTBHHHHHHHHHHHH-----TT-------CEEEEEES
T ss_pred HHHHHHHHHHHhc-CCCC---CEEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeC
Confidence 4445556665444 2234 89999998 8777666554433 34 26888887
No 480
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=38.70 E-value=18 Score=39.28 Aligned_cols=35 Identities=37% Similarity=0.652 Sum_probs=27.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccc
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 368 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi 368 (601)
..|||+|+|.||+..|-.+.+ .|. ++.++++...+
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~-----~G~-------~V~vlEk~~~~ 161 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATD-----SGA-------KVILIEKEPVI 161 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------cEEEEeCCCCC
Confidence 679999999999999877654 453 68899987654
No 481
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=38.65 E-value=17 Score=33.51 Aligned_cols=96 Identities=13% Similarity=0.190 Sum_probs=57.7
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhcc---ccccCCCCCcccCCCH
Q 007499 323 KIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPF---AKDPGDFMGLREGASL 398 (601)
Q Consensus 323 riv~~G-AGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~f---a~~~~~~~~~~~~~~L 398 (601)
||+|+| +|..|..+|..+.+ .| -+++++|++- + .+...+..+ ... .+. ...++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~-----~g-------~~V~~~~r~~----~--~~~~~~~~~~~~~~~-~~~----~~~~~ 58 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT-----LG-------HEIVVGSRRE----E--KAEAKAAEYRRIAGD-ASI----TGMKN 58 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEESSH----H--HHHHHHHHHHHHHSS-CCE----EEEEH
T ss_pred eEEEEcCCCHHHHHHHHHHHH-----CC-------CEEEEEeCCH----H--HHHHHHHHhcccccc-CCC----ChhhH
Confidence 799999 99999999888764 34 2688888741 0 111111111 000 001 12468
Q ss_pred HHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 399 LEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 399 ~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
.++++. .|++|=+. .+. ..+++++.+.... +..+|.-+||+.+
T Consensus 59 ~~~~~~--~D~Vi~~~-~~~-~~~~~~~~l~~~~-~~~~vi~~~~g~~ 101 (212)
T 1jay_A 59 EDAAEA--CDIAVLTI-PWE-HAIDTARDLKNIL-REKIVVSPLVPVS 101 (212)
T ss_dssp HHHHHH--CSEEEECS-CHH-HHHHHHHHTHHHH-TTSEEEECCCCEE
T ss_pred HHHHhc--CCEEEEeC-Chh-hHHHHHHHHHHHc-CCCEEEEcCCCcC
Confidence 888887 79888443 233 3567777764322 4678999999765
No 482
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=38.55 E-value=48 Score=31.50 Aligned_cols=46 Identities=24% Similarity=0.353 Sum_probs=30.7
Q ss_pred CCHHHHhcccCCcEEEeecCCCCC-----------------CCHHHHHHhhhcCCCCCeEEecC
Q 007499 396 ASLLEVVRKVKPHVLLGLSGVGGV-----------------FNEEVLKAMRESDSVKPAIFAMS 442 (601)
Q Consensus 396 ~~L~e~V~~vkptvLIG~S~~~g~-----------------Ft~evv~~Ma~~~~erPIIFaLS 442 (601)
.++.++++..++|++|=+.+..+. -|..+++++.+ ..-+.+||.=|
T Consensus 51 ~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~-~~~~~~v~~SS 113 (319)
T 4b8w_A 51 AQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFE-VGARKVVSCLS 113 (319)
T ss_dssp HHHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHH-TTCSEEEEECC
T ss_pred HHHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEEcc
Confidence 458888988899999988765431 12346777754 44456888444
No 483
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=38.52 E-value=19 Score=34.84 Aligned_cols=31 Identities=26% Similarity=0.324 Sum_probs=24.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 323 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 323 riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
||.|+|+|..|..+|..+.. .|. +++++|++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRR-----RGH-------YLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 79999999999999988764 342 68888874
No 484
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=38.41 E-value=16 Score=40.08 Aligned_cols=32 Identities=31% Similarity=0.422 Sum_probs=25.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
..|+|+|||.+|+..|-.|.. .|+ ++.++|+.
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~-----~G~-------~V~VlEr~ 81 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRA-----GGV-------GALVLEKL 81 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEBSC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEcCC
Confidence 579999999999999888765 454 58888875
No 485
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=38.41 E-value=19 Score=42.82 Aligned_cols=39 Identities=26% Similarity=0.408 Sum_probs=31.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 321 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 321 ~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
+.||+++|||.-|.-++..|+.+++ -.| -..+|.++|.+
T Consensus 425 ~~~VlvVGaGGlGsevlk~La~~Gv-~~g-----~~G~i~lvD~D 463 (1015)
T 3cmm_A 425 NSKVFLVGSGAIGCEMLKNWALLGL-GSG-----SDGYIVVTDND 463 (1015)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTT-TCS-----TTCEEEEECCC
T ss_pred cCeEEEEecCHHHHHHHHHHHHcCc-CcC-----CCCeEEEEeCC
Confidence 4899999999999999999988755 112 12589999987
No 486
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=38.34 E-value=13 Score=39.27 Aligned_cols=35 Identities=20% Similarity=0.402 Sum_probs=26.2
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCc
Q 007499 320 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 366 (601)
Q Consensus 320 ~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~G 366 (601)
..+||+|+|.|.+|++.|+.+.+ .|. ++...|++-
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~-----~G~-------~v~~~D~~~ 38 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLA-----RGV-------TPRVMDTRM 38 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHT-----TTC-------CCEEEESSS
T ss_pred CCCEEEEEeecHHHHHHHHHHHh-----CCC-------EEEEEECCC
Confidence 44899999999999999866643 453 566777753
No 487
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=38.27 E-value=34 Score=34.72 Aligned_cols=32 Identities=25% Similarity=0.420 Sum_probs=21.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 194 ~~VlV~GaG~vG~~a~qla~~-----~Ga------~~Vi~~~~ 225 (374)
T 1cdo_A 194 STCAVFGLGAVGLAAVMGCHS-----AGA------KRIIAVDL 225 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEEcC
Confidence 799999998766555444332 343 46888875
No 488
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=38.24 E-value=20 Score=35.15 Aligned_cols=111 Identities=15% Similarity=0.064 Sum_probs=55.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCCh-hhhccccccCC-CCCcccCCCHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP-AAAPFAKDPGD-FMGLREGASLL 399 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~-~k~~fa~~~~~-~~~~~~~~~L~ 399 (601)
.||.|+|+|..|..+|..|..+.....|. .+++++|+..-+. .+.. ........... ........+-.
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~------~~V~~~~r~~~~~----~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 78 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGL------LEVSWIARGAHLE----AIRAAGGLRVVTPSRDFLARPTCVTDNP 78 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSS------EEEEEECCHHHHH----HHHHHTSEEEECSSCEEEECCSEEESCH
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCC------CCEEEEEcHHHHH----HHHhcCCeEEEeCCCCeEEecceEecCc
Confidence 48999999999999999887642101130 2688887621110 0111 00000000000 00000011223
Q ss_pred HHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007499 400 EVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 446 (601)
Q Consensus 400 e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIFaLSNPt~ 446 (601)
++++. +|++| ++..+.. .+++++.++....+..+|..++|-..
T Consensus 79 ~~~~~--~D~vi-l~vk~~~-~~~v~~~i~~~l~~~~~iv~~~nG~~ 121 (317)
T 2qyt_A 79 AEVGT--VDYIL-FCTKDYD-MERGVAEIRPMIGQNTKILPLLNGAD 121 (317)
T ss_dssp HHHCC--EEEEE-ECCSSSC-HHHHHHHHGGGEEEEEEEEECSCSSS
T ss_pred cccCC--CCEEE-EecCccc-HHHHHHHHHhhcCCCCEEEEccCCCC
Confidence 44544 67766 3333333 48899888542334557777899764
No 489
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=38.15 E-value=13 Score=41.18 Aligned_cols=33 Identities=18% Similarity=0.391 Sum_probs=25.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
..|+|+|||.+|+..|-.|... .|+ ++.++|+.
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~----~G~-------~V~viEr~ 65 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAF----PDI-------RTCIVEQK 65 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC----TTS-------CEEEECSS
T ss_pred CcEEEECcCHHHHHHHHHHHHh----CCC-------CEEEEeCC
Confidence 5799999999999998877540 354 57788865
No 490
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=38.07 E-value=47 Score=33.55 Aligned_cols=46 Identities=15% Similarity=0.304 Sum_probs=28.7
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 303 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 303 Agll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
+..+.+++..+.+ .. ++|+|+|||..|...+.+... .|. +++.+|+
T Consensus 166 ~ta~~~l~~~~~~-~g---~~VlV~GaG~vG~~~~qlak~-----~Ga-------~Vi~~~~ 211 (360)
T 1piw_A 166 LTVYSPLVRNGCG-PG---KKVGIVGLGGIGSMGTLISKA-----MGA-------ETYVISR 211 (360)
T ss_dssp HHHHHHHHHTTCS-TT---CEEEEECCSHHHHHHHHHHHH-----HTC-------EEEEEES
T ss_pred HHHHHHHHHcCCC-CC---CEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEcC
Confidence 3445666654332 34 799999998777666554433 242 5888885
No 491
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=37.77 E-value=44 Score=33.81 Aligned_cols=50 Identities=18% Similarity=0.218 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 300 VALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 300 v~LAgll~Alr~~g~~l~dl~~~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
+.++..+.|++....--.. ++++|.|| |..|..++.++.. .|. +++.+|+
T Consensus 153 ~~~~ta~~al~~~~~~~~g---~~vlV~GasggiG~~~~~~a~~-----~Ga-------~Vi~~~~ 203 (351)
T 1yb5_A 153 IPYFTAYRALIHSACVKAG---ESVLVHGASGGVGLAACQIARA-----YGL-------KILGTAG 203 (351)
T ss_dssp HHHHHHHHHHHTTSCCCTT---CEEEEETCSSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred hHHHHHHHHHHHhhCCCCc---CEEEEECCCChHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 3455566666533332234 79999998 8777766655443 342 5887775
No 492
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=37.26 E-value=42 Score=33.27 Aligned_cols=31 Identities=23% Similarity=0.282 Sum_probs=20.4
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 322 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 322 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
.+|+|.|| |..|...+.+... .|. +++.+|+
T Consensus 151 ~~VlV~Ga~G~vG~~~~q~a~~-----~Ga-------~vi~~~~ 182 (328)
T 1xa0_A 151 GPVLVTGATGGVGSLAVSMLAK-----RGY-------TVEASTG 182 (328)
T ss_dssp CCEEESSTTSHHHHHHHHHHHH-----TTC-------CEEEEES
T ss_pred ceEEEecCCCHHHHHHHHHHHH-----CCC-------EEEEEEC
Confidence 48999998 8777665544432 342 4777776
No 493
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=37.21 E-value=18 Score=36.88 Aligned_cols=97 Identities=14% Similarity=0.166 Sum_probs=51.8
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCC
Q 007499 318 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 397 (601)
Q Consensus 318 dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~ 397 (601)
++...||.|+|+|..|...+..+... ..|. +-+.++|++ .+......+.|--. . ....+
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~~---~~~~------~lvav~d~~------~~~~~~~a~~~g~~-~-----~~~~~ 78 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLANT---VSGV------EVVAVCDIV------AGRAQAALDKYAIE-A-----KDYND 78 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT---CTTE------EEEEEECSS------TTHHHHHHHHHTCC-C-----EEESS
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHhh---CCCc------EEEEEEeCC------HHHHHHHHHHhCCC-C-----eeeCC
Confidence 33447999999999887665554421 1121 223466763 11111122222100 0 13578
Q ss_pred HHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEE
Q 007499 398 LLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIF 439 (601)
Q Consensus 398 L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIF 439 (601)
+.|+++.-++|+++ +++ |..+..++++...+ ..++|+.
T Consensus 79 ~~~ll~~~~~D~V~-i~t-p~~~h~~~~~~al~--aGk~Vl~ 116 (357)
T 3ec7_A 79 YHDLINDKDVEVVI-ITA-SNEAHADVAVAALN--ANKYVFC 116 (357)
T ss_dssp HHHHHHCTTCCEEE-ECS-CGGGHHHHHHHHHH--TTCEEEE
T ss_pred HHHHhcCCCCCEEE-EcC-CcHHHHHHHHHHHH--CCCCEEe
Confidence 99999987889988 554 45555666655433 2355554
No 494
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=37.19 E-value=1.1e+02 Score=31.13 Aligned_cols=41 Identities=7% Similarity=-0.013 Sum_probs=27.0
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEE
Q 007499 395 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIF 439 (601)
Q Consensus 395 ~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~~erPIIF 439 (601)
..++.|+++.-++|+++ +.+ |..+..++++...+ ..++|+.
T Consensus 72 ~~~~~~ll~~~~iD~V~-i~t-p~~~h~~~~~~al~--~Gk~V~~ 112 (383)
T 3oqb_A 72 TTDLDAALADKNDTMFF-DAA-TTQARPGLLTQAIN--AGKHVYC 112 (383)
T ss_dssp ESCHHHHHHCSSCCEEE-ECS-CSSSSHHHHHHHHT--TTCEEEE
T ss_pred cCCHHHHhcCCCCCEEE-ECC-CchHHHHHHHHHHH--CCCeEEE
Confidence 47899999988889887 555 44556666554433 3456554
No 495
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=36.82 E-value=45 Score=32.53 Aligned_cols=98 Identities=17% Similarity=0.166 Sum_probs=50.8
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCccccCCCCCCChhhhccccccCCCCCcccCCCHHH
Q 007499 322 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 400 (601)
Q Consensus 322 ~riv~~GA-GsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~GLi~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 400 (601)
.+|+|.|| |-.|..+++.|++ .| -+++.+|++.- ....+......+..- ++ .+..++.+
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~l~~~~~~~~~~--Dl---~d~~~~~~ 73 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRA-----AG-------HDLVLIHRPSS---QIQRLAYLEPECRVA--EM---LDHAGLER 73 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEECTTS---CGGGGGGGCCEEEEC--CT---TCHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEecChH---hhhhhccCCeEEEEe--cC---CCHHHHHH
Confidence 38999997 7777777666654 34 36888887421 001121111112111 11 12245778
Q ss_pred HhcccCCcEEEeecCCCCCC--------------CHHHHHHhhhcCCCCCeEEecC
Q 007499 401 VVRKVKPHVLLGLSGVGGVF--------------NEEVLKAMRESDSVKPAIFAMS 442 (601)
Q Consensus 401 ~V~~vkptvLIG~S~~~g~F--------------t~evv~~Ma~~~~erPIIFaLS 442 (601)
+++. +|++|=+.+..+.. +..+++++.+ +.-+.|||.=|
T Consensus 74 ~~~~--~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~~v~~SS 126 (342)
T 2x4g_A 74 ALRG--LDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQ-ARVPRILYVGS 126 (342)
T ss_dssp HTTT--CSEEEEC------------CHHHHHHHHHHHHHHHHHH-HTCSCEEEECC
T ss_pred HHcC--CCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEECC
Confidence 8875 89999877643311 3456777643 33456887543
No 496
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=36.76 E-value=12 Score=42.16 Aligned_cols=32 Identities=28% Similarity=0.437 Sum_probs=25.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
-.|+|+|||.||+..|-.+.. .|+ ++.++++.
T Consensus 28 yDVIVIGgG~AGl~AAlalAr-----~G~-------kVlLIEk~ 59 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAAR-----MGA-------KTAMFVLN 59 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEec
Confidence 579999999999999877654 353 68889875
No 497
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=36.63 E-value=42 Score=33.72 Aligned_cols=44 Identities=20% Similarity=0.319 Sum_probs=26.7
Q ss_pred HHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 305 LLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 305 ll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
.+.+++..+.+ .. ++|+|+|||..|...+.+.. ..|. +++.+|+
T Consensus 165 a~~~l~~~~~~-~g---~~VlV~GaG~vG~~a~qla~-----~~Ga-------~Vi~~~~ 208 (348)
T 3two_A 165 TYSPLKFSKVT-KG---TKVGVAGFGGLGSMAVKYAV-----AMGA-------EVSVFAR 208 (348)
T ss_dssp HHHHHHHTTCC-TT---CEEEEESCSHHHHHHHHHHH-----HTTC-------EEEEECS
T ss_pred HHHHHHhcCCC-CC---CEEEEECCcHHHHHHHHHHH-----HCCC-------eEEEEeC
Confidence 35666655433 34 79999999876655544332 2342 5887775
No 498
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=36.60 E-value=20 Score=35.86 Aligned_cols=31 Identities=23% Similarity=0.275 Sum_probs=24.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 365 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~~ 365 (601)
.||.|+|+|+-|..+|..|. . | .+++++++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~-----g-------~~V~~~~r~ 33 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-L-----Y-------HDVTVVTRR 33 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T-----T-------SEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHh-c-----C-------CceEEEECC
Confidence 68999999999999988876 3 2 367777764
No 499
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=36.55 E-value=17 Score=38.01 Aligned_cols=21 Identities=29% Similarity=0.498 Sum_probs=18.8
Q ss_pred ceEEEeCcchHHHHHHHHHHH
Q 007499 322 QKIVVVGAGSAGLGVLKMAVQ 342 (601)
Q Consensus 322 ~riv~~GAGsAg~GiA~ll~~ 342 (601)
.+|+|+|||.+|+..|..|..
T Consensus 14 ~~v~iiG~G~~Gl~aA~~l~~ 34 (504)
T 1sez_A 14 KRVAVIGAGVSGLAAAYKLKI 34 (504)
T ss_dssp CEEEEECCSHHHHHHHHHHHT
T ss_pred CeEEEECCCHHHHHHHHHHHH
Confidence 689999999999999988764
No 500
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=36.51 E-value=53 Score=32.37 Aligned_cols=49 Identities=18% Similarity=0.207 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007499 300 VALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 364 (601)
Q Consensus 300 v~LAgll~Alr~~g~~l~dl~~~riv~~GAGsAg~GiA~ll~~~~~~~~Gls~eeA~~~i~lvD~ 364 (601)
..++..+.|++..+. -.. ++|+|+|||+.|...+.+... .|. +++.+|+
T Consensus 126 ~~~~ta~~al~~~~~-~~g---~~VlV~GaG~vG~~a~qlak~-----~Ga-------~Vi~~~~ 174 (315)
T 3goh_A 126 CPLLTAWQAFEKIPL-TKQ---REVLIVGFGAVNNLLTQMLNN-----AGY-------VVDLVSA 174 (315)
T ss_dssp HHHHHHHHHHTTSCC-CSC---CEEEEECCSHHHHHHHHHHHH-----HTC-------EEEEECS
T ss_pred cHHHHHHHHHhhcCC-CCC---CEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEEC
Confidence 445556666633332 234 799999998888666554433 242 6777763
Done!