Query 007501
Match_columns 601
No_of_seqs 326 out of 1734
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 03:18:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007501.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007501hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dwl_A Actin-related protein 3 100.0 1.8E-60 6E-65 517.3 11.2 275 3-600 123-426 (427)
2 3qb0_A Actin-related protein 4 100.0 4.3E-60 1.5E-64 521.7 14.1 136 456-596 277-497 (498)
3 4fo0_A Actin-related protein 8 100.0 5.7E-57 2E-61 505.9 8.3 337 3-597 198-590 (593)
4 1k8k_B ARP2, actin-like protei 100.0 3.5E-54 1.2E-58 462.5 15.4 265 2-594 103-388 (394)
5 2fxu_A Alpha-actin-1, actin, a 100.0 4.8E-53 1.7E-57 450.1 16.2 267 3-597 100-375 (375)
6 1k8k_A ARP3, actin-like protei 100.0 6.5E-50 2.2E-54 430.9 13.3 278 3-598 107-415 (418)
7 4am6_A Actin-like protein ARP8 100.0 3.8E-46 1.3E-50 415.9 6.2 117 2-122 220-351 (655)
8 1jce_A ROD shape-determining p 99.6 1.4E-16 4.7E-21 166.5 7.9 114 3-121 95-216 (344)
9 1dkg_D Molecular chaperone DNA 99.0 5.7E-11 2E-15 125.5 2.4 91 4-94 136-242 (383)
10 2v7y_A Chaperone protein DNAK; 98.8 4.6E-10 1.6E-14 124.0 1.6 90 4-93 110-210 (509)
11 3qfu_A 78 kDa glucose-regulate 98.6 1.2E-08 4E-13 107.8 2.8 90 4-93 154-255 (394)
12 3h1q_A Ethanolamine utilizatio 98.1 3.9E-06 1.3E-10 84.1 7.1 96 5-116 94-197 (272)
13 3h1q_A Ethanolamine utilizatio 97.3 5.8E-05 2E-09 75.5 1.7 61 492-569 212-272 (272)
14 2ych_A Competence protein PILM 96.7 0.0017 5.9E-08 67.8 6.0 86 25-121 167-254 (377)
15 3i33_A Heat shock-related 70 k 96.4 0.004 1.4E-07 65.7 6.8 91 4-94 159-264 (404)
16 3i33_A Heat shock-related 70 k 96.3 0.00066 2.2E-08 71.8 -0.2 87 465-571 314-400 (404)
17 2kho_A Heat shock protein 70; 95.2 0.0042 1.4E-07 69.9 0.9 85 466-571 297-381 (605)
18 1yuw_A Heat shock cognate 71 k 95.1 0.026 8.9E-07 62.7 6.7 90 4-93 140-242 (554)
19 4a2a_A Cell division protein F 95.0 0.012 4.2E-07 63.2 3.7 81 27-118 186-266 (419)
20 1yuw_A Heat shock cognate 71 k 94.5 0.0064 2.2E-07 67.6 0.0 86 465-570 293-378 (554)
21 2zgy_A Plasmid segregation pro 94.3 0.026 8.8E-07 57.9 4.0 85 26-114 143-229 (320)
22 2kho_A Heat shock protein 70; 94.1 0.055 1.9E-06 60.8 6.3 113 5-117 137-275 (605)
23 3js6_A Uncharacterized PARM pr 93.9 0.04 1.4E-06 57.9 4.6 73 25-97 156-234 (355)
24 4apw_A ALP12; actin-like prote 93.9 0.026 8.7E-07 58.6 3.0 79 15-94 122-219 (329)
25 2fsj_A Hypothetical protein TA 93.9 0.046 1.6E-06 57.0 4.9 89 8-96 126-241 (346)
26 2ych_A Competence protein PILM 93.3 0.0052 1.8E-07 64.2 -3.5 46 492-540 286-331 (377)
27 4ehu_A Activator of 2-hydroxyi 93.1 0.023 7.9E-07 56.8 1.1 66 491-569 187-252 (276)
28 3d2f_A Heat shock protein homo 92.7 0.03 1E-06 63.8 1.3 85 465-570 297-381 (675)
29 4gni_A Putative heat shock pro 92.4 0.016 5.5E-07 61.3 -1.4 88 466-572 308-401 (409)
30 3d2f_A Heat shock protein homo 92.1 0.085 2.9E-06 60.1 4.1 89 5-93 140-246 (675)
31 4a2a_A Cell division protein F 89.3 0.16 5.4E-06 54.5 2.7 71 493-570 305-392 (419)
32 4gni_A Putative heat shock pro 89.1 0.34 1.2E-05 51.0 5.2 90 5-94 152-255 (409)
33 4fo0_A Actin-related protein 8 85.4 0.36 1.2E-05 53.5 2.8 63 421-492 308-373 (593)
34 2d0o_A DIOL dehydratase-reacti 85.1 1.1 3.7E-05 49.8 6.2 63 46-119 406-468 (610)
35 1nbw_A Glycerol dehydratase re 85.1 1.1 3.7E-05 49.9 6.3 63 46-119 408-470 (607)
36 4b9q_A Chaperone protein DNAK; 83.9 0.23 7.9E-06 55.7 0.4 66 492-570 315-380 (605)
37 4b9q_A Chaperone protein DNAK; 81.5 1.2 4.2E-05 49.8 5.1 90 5-94 137-242 (605)
38 3cet_A Conserved archaeal prot 78.3 1.2 4E-05 46.5 3.3 25 47-71 127-151 (334)
39 3cer_A Possible exopolyphospha 71.4 2.9 0.0001 43.5 4.2 42 47-88 146-191 (343)
40 1t6c_A Exopolyphosphatase; alp 68.5 3.6 0.00012 42.3 4.1 40 47-88 138-177 (315)
41 2ews_A Pantothenate kinase; PA 68.2 2.2 7.6E-05 43.5 2.4 72 491-569 214-286 (287)
42 2zgy_A Plasmid segregation pro 61.9 2.3 7.7E-05 43.3 1.0 47 516-569 273-319 (320)
43 4apw_A ALP12; actin-like prote 58.3 1.9 6.3E-05 44.4 -0.4 47 514-570 277-323 (329)
44 3mdq_A Exopolyphosphatase; str 57.9 7.4 0.00025 39.8 4.1 40 47-88 131-170 (315)
45 3aap_A Ectonucleoside triphosp 55.5 7.5 0.00026 40.6 3.7 37 47-83 140-178 (353)
46 2i7n_A Pantothenate kinase 1; 55.4 6.9 0.00024 41.2 3.4 75 491-569 283-358 (360)
47 1hux_A Activator of (R)-2-hydr 54.6 2.7 9.2E-05 42.0 0.1 48 516-571 209-256 (270)
48 1u6z_A Exopolyphosphatase; alp 47.5 15 0.00052 40.1 4.7 39 48-88 138-176 (513)
49 2l2l_B Methyl-CPG-binding doma 47.4 27 0.00093 24.5 4.2 26 155-180 6-31 (36)
50 3hi0_A Putative exopolyphospha 41.3 20 0.0007 39.1 4.5 39 47-87 140-178 (508)
51 1nbw_A Glycerol dehydratase re 40.7 15 0.00051 40.9 3.2 46 517-567 552-602 (607)
52 2d0o_A DIOL dehydratase-reacti 37.8 16 0.00054 40.7 2.9 46 517-567 550-600 (610)
53 4htl_A Beta-glucoside kinase; 32.1 28 0.00095 34.7 3.5 52 517-570 239-290 (297)
54 2fsj_A Hypothetical protein TA 31.5 8.8 0.0003 39.5 -0.4 48 515-570 296-343 (346)
55 2aa4_A Mannac kinase, putative 31.2 16 0.00055 36.0 1.5 52 517-569 235-286 (289)
56 3js6_A Uncharacterized PARM pr 28.0 3.8 0.00013 42.7 -4.0 45 514-570 289-335 (355)
57 2gup_A ROK family protein; sug 27.7 14 0.00049 36.5 0.4 54 517-570 229-286 (292)
58 4db3_A Glcnac kinase, N-acetyl 27.5 34 0.0012 34.6 3.2 53 517-569 271-324 (327)
59 2yhx_A Hexokinase B; transfera 26.4 55 0.0019 35.3 4.7 52 517-571 385-442 (457)
60 3vov_A Glucokinase, hexokinase 24.5 29 0.001 34.7 2.0 54 517-570 239-294 (302)
61 3htv_A D-allose kinase, alloki 23.1 53 0.0018 33.0 3.6 62 517-578 241-306 (310)
62 1k1f_A Breakpoint cluster regi 22.3 1.8E+02 0.0063 23.0 5.7 38 143-180 13-50 (72)
63 1saz_A Probable butyrate kinas 21.9 36 0.0012 35.4 2.2 51 517-571 297-348 (381)
64 2hoe_A N-acetylglucosamine kin 21.7 38 0.0013 35.0 2.2 53 517-569 316-369 (380)
65 3vkg_A Dynein heavy chain, cyt 21.4 1.6E+03 0.056 30.2 19.0 69 508-587 2242-2311(3245)
66 2qm1_A Glucokinase; alpha-beta 20.3 26 0.00088 35.0 0.6 54 517-570 264-320 (326)
No 1
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-60 Score=517.30 Aligned_cols=275 Identities=25% Similarity=0.384 Sum_probs=227.7
Q ss_pred CceEEEecCcc---cchHHHHHHH------hhhhhhhhhhhhhccccCC---CCCCcccceeecCCCceeEEeeeCCccc
Q 007501 3 PFHFMFLECML---LSKINMSFLY------AITAFGVDAAFSYKYNQQY---GICNKDGLAICPGFSTTHVIPFVEGEPV 70 (601)
Q Consensus 3 dhpVLlTE~~~---~~Rekm~Eil------~al~~~~~sllSlya~g~~---~~~~ttGLVVD~G~~~T~VvPV~eG~~l 70 (601)
+|||||||||+ .+|++|+|+| +++|++++++||+|++|.+ ....+||||||+|+++|||+||++|+++
T Consensus 123 ~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l 202 (427)
T 3dwl_A 123 DHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVI 202 (427)
T ss_dssp GCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEEC
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEe
Confidence 69999999999 9999999999 3999999999999999821 0014799999999999999999999999
Q ss_pred ccCceeecccchHhHHHHHHHHhccCCCCCCcccHHHHHHHHhhccccccChHHHHHHHhcCcccccccceeeEcCCCCC
Q 007501 71 YRGSCRTNIGGYHITDYLKQLLSLKHPQHMTKLTWEKVEDLKMEHCYIAPDYFSEAQLFQKGTKEAEHKTRCWQLPWVPP 150 (601)
Q Consensus 71 ~~a~~rl~iGG~~lt~yL~kLL~~k~~~~~~~~~~~~v~~IKe~~CyVa~Dy~~el~~~~~~~~~~~~~~~~~QlP~~~~ 150 (601)
.++++|+++||+++|+||.++|..+|+. ..+.+++++||+++|||+.||.+|++.+...
T Consensus 203 ~~~~~rl~~gG~~lt~~L~~lL~~~~~~---~~~~~~~~~IKe~~cyv~~d~~~e~~~~~~~------------------ 261 (427)
T 3dwl_A 203 GSSIKTMPLAGRDVTYFVQSLLRDRNEP---DSSLKTAERIKEECCYVCPDIVKEFSRFDRE------------------ 261 (427)
T ss_dssp GGGCEEESCCHHHHHHHHHHTTC-----------CHHHHHHHHHHCCCCSCHHHHHHHTTC-------------------
T ss_pred hhhheeccccHHHHHHHHHHHHHHcCCC---chhHHHHHHHHHhcCcccCCHHHHHHHhhcC------------------
Confidence 9999999999999999999999999876 4677899999999999999998887543210
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHhhhcCCCCHHHHHHH
Q 007501 151 PTEEPPSEEEIARKAAIKERQGQRLREMAEAKRSSRINELENQIHGLEFLLQQLEQVEENDIAAFLSDTGYVSRQEIEST 230 (601)
Q Consensus 151 ~~~~~~t~eel~~~~err~~~~~rl~e~~~~~r~ekl~~~e~~l~~~~~l~~~~~~~~~~~~~~~L~~~g~~~~~~l~~~ 230 (601)
+
T Consensus 262 ------~------------------------------------------------------------------------- 262 (427)
T 3dwl_A 262 ------P------------------------------------------------------------------------- 262 (427)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------c-------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHhhhcchhhhhhhhhhhcccCCCCCCcCCCCccCCHHHHHHHHHhhhhccChHHHHHHHHHHHHHHHHHHH
Q 007501 231 LVKLTQSLRKAKGERKVEQAELEKTDASMNEKYPLIHIPDNMLSLEQLKEKRRQIFLKTTTEGRQRAKQKRVEEELEQEK 310 (601)
Q Consensus 231 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~i~d~~L~~~~~keKr~q~llk~~~~~r~~~k~~k~~e~~~~~~ 310 (601)
.....| +
T Consensus 263 ---------------------------~~~~~~----------------------------~------------------ 269 (427)
T 3dwl_A 263 ---------------------------DRYLKY----------------------------A------------------ 269 (427)
T ss_dssp ------------------------------CCB----------------------------C------------------
T ss_pred ---------------------------ccccee----------------------------E------------------
Confidence 000001 0
Q ss_pred HhHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcccccHHHHHHHHHhhhhhhccCCC
Q 007501 311 KNQEEEERRLENPELYVEQMRAKYKELSEKIDQRKRLKTNGNHTNGNNTSGGVGRGERLNAAQRERMRLLTTAAFDRGKG 390 (601)
Q Consensus 311 ~~~~~e~~r~~~~~~w~~~~r~~~~~i~~~~~~R~~~~~~l~~~~~~~~~~~~~~~~r~s~a~~~rm~~~~~l~~~~~~~ 390 (601)
+.
T Consensus 270 ----------------------------------------l~-------------------------------------- 271 (427)
T 3dwl_A 270 ----------------------------------------SE-------------------------------------- 271 (427)
T ss_dssp ----------------------------------------C---------------------------------------
T ss_pred ----------------------------------------ee--------------------------------------
Confidence 10
Q ss_pred CCCCCCCchhhHHHHhhhcCCCCCchhhhHHHHHHHHHHHhhhhcCCCCCCCCCCCCCCccCCCCccccCCCCC-eEEEe
Q 007501 391 EDTFGAKDEDWQLYKLMSRDNDDDDEEMDENEAELARISARLQEVDPTFVPKQESGPTQSAAEIPRVRPLTKED-FQIVL 469 (601)
Q Consensus 391 ~d~fg~~d~dw~~y~~i~~~~d~~~~~~e~~~~~L~~le~~L~~~dp~F~~~~~~~~~~~~~~~~~~y~lpdg~-~~I~L 469 (601)
.|+|. +.|+|
T Consensus 272 ---------------------------------------------------------------------~~~g~~~~i~i 282 (427)
T 3dwl_A 272 ---------------------------------------------------------------------SITGHSTTIDV 282 (427)
T ss_dssp -----------------------------------------------------------------------------CBC
T ss_pred ---------------------------------------------------------------------CCCCCeeEEEE
Confidence 02221 57889
Q ss_pred CcccccccccccCCCCCCCC-CCCcchhHHHHhhcCCCCChhhHHhhhcCcEEecCCCCCCChHHHHHHHHHhhC-----
Q 007501 470 GVERFRCPEILFRPNWVGID-QVGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIR----- 543 (601)
Q Consensus 470 g~ERf~~pEiLF~Psl~g~~-~~GL~e~I~~sI~~~~~~~~d~r~~L~~NIvLtGG~S~~pGf~eRL~~EL~~l~----- 543 (601)
+.|||+|||+||+|+++|.+ ..||+++|.+||+ +||+|+|+.||+|||||||+|+||||.+||++||+.++
T Consensus 283 g~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~---~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~ 359 (427)
T 3dwl_A 283 GFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQ---SSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIH 359 (427)
T ss_dssp CTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHH---TSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC--
T ss_pred ChHhhhChhhccCchhcCCccCCCccHHHHHHHH---hCCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhcc
Confidence 99999999999999999999 5999999999997 57999999999999999999999999999999999997
Q ss_pred ---------CCCCCeeEeeCCCCcccceehhhhhhccCCCCCccccHHHHhhhchHHHHHhh-cccC
Q 007501 544 ---------PCGAPIKVVRALDPVLDAWRGASVYATKLQFPQQTFSRMDYYEKGENWLRRYQ-LQYT 600 (601)
Q Consensus 544 ---------p~~~~i~V~~~~d~~~~aW~GgSilasl~~f~~~wITk~EYeE~G~~iv~rk~-~~~~ 600 (601)
|..++|+|+++++|.|++|+||||||++++|+++||||+||+|+|++|||+|+ |+.+
T Consensus 360 ~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilasl~~f~~~witk~EYeE~G~~iv~~~~~~~~~ 426 (427)
T 3dwl_A 360 RSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQTPEFGSYCHTKADYEEYGASIARRYQIFGNS 426 (427)
T ss_dssp -----------CCCCCEECCTTCTTHHHHHHHHHHHSTTHHHHSEEHHHHHHSCGGGGSCCCC----
T ss_pred ccccccccCCCceeEEEecCCccccceecCceeeccccchhheeEEHHHHhhhChHhheecccccCC
Confidence 56778999999999999999999999999999999999999999999999998 5654
No 2
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-60 Score=521.68 Aligned_cols=136 Identities=27% Similarity=0.440 Sum_probs=128.9
Q ss_pred ccccCCCCCeEEEeCcc-cccccccccCCCCCCC----------------------------------------------
Q 007501 456 RVRPLTKEDFQIVLGVE-RFRCPEILFRPNWVGI---------------------------------------------- 488 (601)
Q Consensus 456 ~~y~lpdg~~~I~Lg~E-Rf~~pEiLF~Psl~g~---------------------------------------------- 488 (601)
+.|+|||| +.|.||.| ||+|||+||+|+++|.
T Consensus 277 ~~yeLPDG-~~i~lg~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (498)
T 3qb0_A 277 RSIESPWN-EEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVPLKRTKPSGVNKSDKKVTPTEEKEQE 355 (498)
T ss_dssp EEEECSSS-CEEEECHHHHHHHHHTTTSCCGGGSCTTSCCCSSSCCCCCSCCCCCCCBCC--------------------
T ss_pred eEEECCCC-CEEEECchHhhhCchhhCCHhHcCCcccccccccccccccccccccccccccccccccccccccccccccc
Confidence 45888999 99999999 9999999999998865
Q ss_pred ----------------------------------CCCCcchhHHHHhhcCCCCChhhHHhhhcCcEEecCCCCCCChHHH
Q 007501 489 ----------------------------------DQVGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSER 534 (601)
Q Consensus 489 ----------------------------------~~~GL~e~I~~sI~~~~~~~~d~r~~L~~NIvLtGG~S~~pGf~eR 534 (601)
+..||+++|++||+ +||.|+|+.||+|||||||+|+||||.+|
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~---~cd~d~r~~L~~nIvLsGGst~~pGf~~R 432 (498)
T 3qb0_A 356 AVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIM---SSDVDLRATLAHNVVLTGGTSSIPGLSDR 432 (498)
T ss_dssp ---------------------------------CCSCCHHHHHHHHHH---TSCTTTHHHHHTTEEEESGGGGSTTHHHH
T ss_pred cccccccccccccccccccccccccccccccccccCCCchHHHHHHHH---hCCHHHHHHHhcCEEEeCCccCchhHHHH
Confidence 66899999999997 57999999999999999999999999999
Q ss_pred HHHHHHhhCCCCCCeeEeeC---CCCcccceehhhhhhccCCCCCccccHHHHhhhch-HHHHHhh
Q 007501 535 LEAGIRMIRPCGAPIKVVRA---LDPVLDAWRGASVYATKLQFPQQTFSRMDYYEKGE-NWLRRYQ 596 (601)
Q Consensus 535 L~~EL~~l~p~~~~i~V~~~---~d~~~~aW~GgSilasl~~f~~~wITk~EYeE~G~-~iv~rk~ 596 (601)
|++||+.++| .++|+|+++ ++|.|++|+||||||++++|+++||||+||+|+|+ .|||+||
T Consensus 433 l~~El~~l~p-~~~i~v~~~~~~~er~~s~WiGgsilasl~~f~~~witk~EY~E~G~~~iv~~kc 497 (498)
T 3qb0_A 433 LMTELNKILP-SLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVGVERLLNDRF 497 (498)
T ss_dssp HHHHHHHHST-TSCCCEECCSCTGGGGSHHHHHHHHHHTCHHHHHTSEEHHHHHTTCCHHHHHHTT
T ss_pred HHHHHHHhCC-CCeeEEEcCCCCCccCccEEcccEEEecCcchhceEEEHHHHhhhCcHhhccccC
Confidence 9999999999 889999988 68999999999999999999999999999999999 8999998
No 3
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.7e-57 Score=505.90 Aligned_cols=337 Identities=16% Similarity=0.114 Sum_probs=216.6
Q ss_pred CceEEEecCcc---cchHHHHHHH------hhhhhhhhhhhhhccccCCCCCCcccceeecCCCceeEEeeeCCcccccC
Q 007501 3 PFHFMFLECML---LSKINMSFLY------AITAFGVDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYRG 73 (601)
Q Consensus 3 dhpVLlTE~~~---~~Rekm~Eil------~al~~~~~sllSlya~g~~~~~~ttGLVVD~G~~~T~VvPV~eG~~l~~a 73 (601)
+||||||||++ .+|++|+||| +++|++.++|||+|++| ++||||||||++.|||+||++|+++.++
T Consensus 198 ~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G-----~~tglVVDiG~~~T~v~PV~dG~~l~~~ 272 (593)
T 4fo0_A 198 YYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSG-----LSSTCIVDVGDQKTSVCCVEDGVSHRNT 272 (593)
T ss_dssp GCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHT-----CSEEEEEEECSSCEEEEEEESSCBCGGG
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCC-----CCceEEEEeCCCceeeeeeECCEEehhh
Confidence 59999999999 9999999999 49999999999999999 8999999999999999999999999999
Q ss_pred ceeecccchHhHHHHHHHHhccCCCCC-----CcccHHHHHHHHhhccccccChHHHHHHHhcCcccccccceeeEcCCC
Q 007501 74 SCRTNIGGYHITDYLKQLLSLKHPQHM-----TKLTWEKVEDLKMEHCYIAPDYFSEAQLFQKGTKEAEHKTRCWQLPWV 148 (601)
Q Consensus 74 ~~rl~iGG~~lt~yL~kLL~~k~~~~~-----~~~~~~~v~~IKe~~CyVa~Dy~~el~~~~~~~~~~~~~~~~~QlP~~ 148 (601)
++|+++||.++|+||.+||..+++.+. ...+..++++||+++|||+.|+..+.. ....+.+|..
T Consensus 273 ~~rl~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~d~~~v~~iKe~~c~v~~d~~~~~~-----------~~~~~~~p~~ 341 (593)
T 4fo0_A 273 RLCLAYGGSDVSRCFYWLMQRAGFPYRECQLTNKMDCLLLQHLKETFCHLDQDISGLQD-----------HEFQIRHPDS 341 (593)
T ss_dssp CEEESCCHHHHHHHHHHHHHHTTCSCTTCCTTCHHHHHHHHHHHHHHCBCCTTCCSCEE-----------EEEEECCTTS
T ss_pred eEEecccHHHHHHHHHHHHHhcCCCccccccccchhHHHHHHHHHHhcccccchHHhhh-----------hhhhcccCCC
Confidence 999999999999999999999976543 345678999999999999999765421 2233444544
Q ss_pred CCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHhhhcCCCCHHHH
Q 007501 149 PPPTEEP-PSEEEIARKAAIKERQGQRLREMAEAKRSSRINELENQIHGLEFLLQQLEQVEENDIAAFLSDTGYVSRQEI 227 (601)
Q Consensus 149 ~~~~~~~-~t~eel~~~~err~~~~~rl~e~~~~~r~ekl~~~e~~l~~~~~l~~~~~~~~~~~~~~~L~~~g~~~~~~l 227 (601)
....... ...| +.+..+++-...
T Consensus 342 ~~~~~~~~~~~E------------------------------------------------------~~~~p~~lf~p~-- 365 (593)
T 4fo0_A 342 PALLYQFRLGDE------------------------------------------------------KLQAPMALFYPA-- 365 (593)
T ss_dssp CEEEEEEEECTH------------------------------------------------------HHHHHHTTTSGG--
T ss_pred CceeeEEeccch------------------------------------------------------hhcCchhhcChh--
Confidence 2100000 0000 001111111000
Q ss_pred HHHHHHHHHHHHHhhhcchhhhhhhhhhhcccCCCCCCcCCCCccCCHHHHHHHHHhhhhccChHHHHHHHHHHHHHHHH
Q 007501 228 ESTLVKLTQSLRKAKGERKVEQAELEKTDASMNEKYPLIHIPDNMLSLEQLKEKRRQIFLKTTTEGRQRAKQKRVEEELE 307 (601)
Q Consensus 228 ~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~i~d~~L~~~~~keKr~q~llk~~~~~r~~~k~~k~~e~~~ 307 (601)
++++......... .....
T Consensus 366 -------------------------------------~~~~~~~~~~~~~----------~~~~~--------------- 383 (593)
T 4fo0_A 366 -------------------------------------TFGIVGQKMTTLQ----------HRSQG--------------- 383 (593)
T ss_dssp -------------------------------------GGCCCSSCCEEEC----------C-------------------
T ss_pred -------------------------------------hhcccccccchhh----------hhccc---------------
Confidence 1111110000000 00000
Q ss_pred HHHHhHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcccccHHHHHHHHHhhhhhhcc
Q 007501 308 QEKKNQEEEERRLENPELYVEQMRAKYKELSEKIDQRKRLKTNGNHTNGNNTSGGVGRGERLNAAQRERMRLLTTAAFDR 387 (601)
Q Consensus 308 ~~~~~~~~e~~r~~~~~~w~~~~r~~~~~i~~~~~~R~~~~~~l~~~~~~~~~~~~~~~~r~s~a~~~rm~~~~~l~~~~ 387 (601)
+++..... ..+. .
T Consensus 384 --------------~~~~~~~~-------------------~~~~--------------------------------~-- 396 (593)
T 4fo0_A 384 --------------DPEDPHDE-------------------HYLL--------------------------------A-- 396 (593)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------Ccccchhh-------------------hhhh--------------------------------h--
Confidence 00000000 0000 0
Q ss_pred CCCCCCCCCCchhhHHHHhhhcCCCCCchhhhHHHHHHHHHHHhhhhcCCCCCCCCCCCCCCccCCCCccccCCCCCeEE
Q 007501 388 GKGEDTFGAKDEDWQLYKLMSRDNDDDDEEMDENEAELARISARLQEVDPTFVPKQESGPTQSAAEIPRVRPLTKEDFQI 467 (601)
Q Consensus 388 ~~~~d~fg~~d~dw~~y~~i~~~~d~~~~~~e~~~~~L~~le~~L~~~dp~F~~~~~~~~~~~~~~~~~~y~lpdg~~~I 467 (601)
..... .. .. ........|.+|+| ..+
T Consensus 397 -------------------~~~~~-----------------------------~~-~~----~~~~~~~~~~~p~g-~~~ 422 (593)
T 4fo0_A 397 -------------------TQSKQ-----------------------------EQ-SA----KATADRKSASKPIG-FEG 422 (593)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------cccch-----------------------------hh-hh----hcccccccccCCCC-ccc
Confidence 00000 00 00 00012345677888 899
Q ss_pred EeCcccccccccccCCCCC--------------------------------CCCCCCcchhHHHHhhcCCCCC-hhhHHh
Q 007501 468 VLGVERFRCPEILFRPNWV--------------------------------GIDQVGLDEMTGVSIRRLPTKD-EDLEQR 514 (601)
Q Consensus 468 ~Lg~ERf~~pEiLF~Psl~--------------------------------g~~~~GL~e~I~~sI~~~~~~~-~d~r~~ 514 (601)
.++.+||.+||+||+|+.. +.+..||+++|++||. +|+ .|+|+.
T Consensus 423 ~~~~e~~~~pe~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gL~~aI~~SI~---~~~~~D~r~~ 499 (593)
T 4fo0_A 423 DLRGQSSDLPERLHSQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAISLFEGKALGLDKAILHSID---CCSSDDTKKK 499 (593)
T ss_dssp ------------------------------------------------CHHHHSCCCHHHHHHHHHH---TCSSHHHHHH
T ss_pred ccccccccCchhccCcccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHH---hCCcHHHHHH
Confidence 9999999999999999642 2345799999999997 567 699999
Q ss_pred hhcCcEEecCCCCCCChHHHHHHHHHhhCCCCC-----CeeEeeCC---CCcccceehhhhhhccCCCCCccccHHHHhh
Q 007501 515 LTSSILMTGGCCLFPGMSERLEAGIRMIRPCGA-----PIKVVRAL---DPVLDAWRGASVYATKLQFPQQTFSRMDYYE 586 (601)
Q Consensus 515 L~~NIvLtGG~S~~pGf~eRL~~EL~~l~p~~~-----~i~V~~~~---d~~~~aW~GgSilasl~~f~~~wITk~EYeE 586 (601)
||+|||||||+|+||||.+||++||+.++|..+ +|+|++++ +|.+++|+||||||++++|+++||||+||+|
T Consensus 500 L~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~~~aW~GgSilasL~~f~~~wItk~EYeE 579 (593)
T 4fo0_A 500 MYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACLDTTQELWIYQREWQR 579 (593)
T ss_dssp HHHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTTTHHHHHHHHHHHCGGGGGTCEEHHHHHH
T ss_pred HhCCEEEEchhhchhcHHHHHHHHHHHhCcchhccccceEEEECCCCCCCCceeeehhhHHHhcCccHHHeeECHHHHHh
Confidence 999999999999999999999999999999653 58999887 7999999999999999999999999999999
Q ss_pred hchHHHHHhhc
Q 007501 587 KGENWLRRYQL 597 (601)
Q Consensus 587 ~G~~iv~rk~~ 597 (601)
+|++|||+||+
T Consensus 580 ~G~~il~~kc~ 590 (593)
T 4fo0_A 580 FGVRMLRERAA 590 (593)
T ss_dssp HTTHHHHHHCS
T ss_pred hCcHHHhhcCC
Confidence 99999999994
No 4
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=3.5e-54 Score=462.52 Aligned_cols=265 Identities=23% Similarity=0.342 Sum_probs=158.7
Q ss_pred CCceEEEecCcc---cchHHHHHHH------hhhhhhhhhhhhhccccCCCCCCcccceeecCCCceeEEeeeCCccccc
Q 007501 2 FPFHFMFLECML---LSKINMSFLY------AITAFGVDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYR 72 (601)
Q Consensus 2 ~dhpVLlTE~~~---~~Rekm~Eil------~al~~~~~sllSlya~g~~~~~~ttGLVVD~G~~~T~VvPV~eG~~l~~ 72 (601)
.+||||||||++ .+|++|+|+| +++++++++++|+|++| .++|||||+|+++|||+||++|+++.+
T Consensus 103 ~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g-----~~~~lVVDiG~g~T~v~pv~~G~~~~~ 177 (394)
T 1k8k_B 103 RNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQG-----LLTGVVVDSGDGVTHICPVYEGFSLPH 177 (394)
T ss_dssp --------------------------------------------------------CCEEEECSSCEEEECEETTEECST
T ss_pred CCCcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCC-----CceEEEEEcCCCceEeeeeECCEEccc
Confidence 379999999998 9999999988 39999999999999999 899999999999999999999999999
Q ss_pred CceeecccchHhHHHHHHHHhccCCCCCCcccHHHHHHHHhhccccccChHHHHHHHhcCcccccccceeeEcCCCCCCC
Q 007501 73 GSCRTNIGGYHITDYLKQLLSLKHPQHMTKLTWEKVEDLKMEHCYIAPDYFSEAQLFQKGTKEAEHKTRCWQLPWVPPPT 152 (601)
Q Consensus 73 a~~rl~iGG~~lt~yL~kLL~~k~~~~~~~~~~~~v~~IKe~~CyVa~Dy~~el~~~~~~~~~~~~~~~~~QlP~~~~~~ 152 (601)
++.++++||.++|+||.++|..+++.+.+..+..++++||+++|||+.||..+++...+
T Consensus 178 ~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~ae~iK~~~~~v~~d~~~~~~~~~~--------------------- 236 (394)
T 1k8k_B 178 LTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALE--------------------- 236 (394)
T ss_dssp TCEEESCCHHHHHHHHHHHHHHTTCCCCTTTTHHHHHHHHHHHCCCCSSHHHHHHHHHH---------------------
T ss_pred ceEEeeccHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhheeEecCHHHHHHhhcc---------------------
Confidence 99999999999999999999999988877789999999999999999887655321100
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHhhhcCCCCHHHHHHHHH
Q 007501 153 EEPPSEEEIARKAAIKERQGQRLREMAEAKRSSRINELENQIHGLEFLLQQLEQVEENDIAAFLSDTGYVSRQEIESTLV 232 (601)
Q Consensus 153 ~~~~t~eel~~~~err~~~~~rl~e~~~~~r~ekl~~~e~~l~~~~~l~~~~~~~~~~~~~~~L~~~g~~~~~~l~~~i~ 232 (601)
T Consensus 237 -------------------------------------------------------------------------------- 236 (394)
T 1k8k_B 237 -------------------------------------------------------------------------------- 236 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhhhcchhhhhhhhhhhcccCCCCCCcCCCCccCCHHHHHHHHHhhhhccChHHHHHHHHHHHHHHHHHHHHh
Q 007501 233 KLTQSLRKAKGERKVEQAELEKTDASMNEKYPLIHIPDNMLSLEQLKEKRRQIFLKTTTEGRQRAKQKRVEEELEQEKKN 312 (601)
Q Consensus 233 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~i~d~~L~~~~~keKr~q~llk~~~~~r~~~k~~k~~e~~~~~~~~ 312 (601)
T Consensus 237 -------------------------------------------------------------------------------- 236 (394)
T 1k8k_B 237 -------------------------------------------------------------------------------- 236 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcccccHHHHHHHHHhhhhhhccCCCCC
Q 007501 313 QEEEERRLENPELYVEQMRAKYKELSEKIDQRKRLKTNGNHTNGNNTSGGVGRGERLNAAQRERMRLLTTAAFDRGKGED 392 (601)
Q Consensus 313 ~~~e~~r~~~~~~w~~~~r~~~~~i~~~~~~R~~~~~~l~~~~~~~~~~~~~~~~r~s~a~~~rm~~~~~l~~~~~~~~d 392 (601)
.
T Consensus 237 --------------------------------------~----------------------------------------- 237 (394)
T 1k8k_B 237 --------------------------------------T----------------------------------------- 237 (394)
T ss_dssp --------------------------------------C-----------------------------------------
T ss_pred --------------------------------------C-----------------------------------------
Confidence 0
Q ss_pred CCCCCchhhHHHHhhhcCCCCCchhhhHHHHHHHHHHHhhhhcCCCCCCCCCCCCCCccCCCCccccCCCCCeEEEeCcc
Q 007501 393 TFGAKDEDWQLYKLMSRDNDDDDEEMDENEAELARISARLQEVDPTFVPKQESGPTQSAAEIPRVRPLTKEDFQIVLGVE 472 (601)
Q Consensus 393 ~fg~~d~dw~~y~~i~~~~d~~~~~~e~~~~~L~~le~~L~~~dp~F~~~~~~~~~~~~~~~~~~y~lpdg~~~I~Lg~E 472 (601)
. .....|++|+| +.|+|+.|
T Consensus 238 -------------------~----------------------------------------~~~~~~~lpdg-~~i~i~~e 257 (394)
T 1k8k_B 238 -------------------T----------------------------------------VLVESYTLPDG-RIIKVGGE 257 (394)
T ss_dssp -------------------S----------------------------------------TTCEEEECTTS-CEEEECTH
T ss_pred -------------------C----------------------------------------cCceEEECCCC-CEEEECch
Confidence 0 00123667888 89999999
Q ss_pred cccccccccCCCCCCCCCCCcchhHHHHhhcCCCCChhhHHhhhcCcEEecCCCCCCChHHHHHHHHHhhC---------
Q 007501 473 RFRCPEILFRPNWVGIDQVGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIR--------- 543 (601)
Q Consensus 473 Rf~~pEiLF~Psl~g~~~~GL~e~I~~sI~~~~~~~~d~r~~L~~NIvLtGG~S~~pGf~eRL~~EL~~l~--------- 543 (601)
||+|||+||+|+++|.+..||+++|.++|.+ ||+|+|+.|++|||||||+|+||||.+||++||..++
T Consensus 258 rf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~---~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el~~~~~~~~~~~~~ 334 (394)
T 1k8k_B 258 RFEAPEALFQPHLINVEGVGVAELLFNTIQA---ADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDV 334 (394)
T ss_dssp HHHTGGGGTCGGGGTCCSCCHHHHHHHHHHH---SCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHHHHHHHHHTCSSCC
T ss_pred hhcChHhhCCchhccCCCCCHHHHHHHHHHh---CCHHHHHHHHhCEEEeCcccccccHHHHHHHHHHHHHhhhhccccc
Confidence 9999999999999999999999999999984 6999999999999999999999999999999999988
Q ss_pred --CCCCCeeEeeCCCCcccceehhhhhhccCCCC-CccccHHHHhhhchHHHHH
Q 007501 544 --PCGAPIKVVRALDPVLDAWRGASVYATKLQFP-QQTFSRMDYYEKGENWLRR 594 (601)
Q Consensus 544 --p~~~~i~V~~~~d~~~~aW~GgSilasl~~f~-~~wITk~EYeE~G~~iv~r 594 (601)
|..++|+|+.+++|.+++|+|||+||++++|+ ++||||+||+|+|++++|+
T Consensus 335 ~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~~itk~eY~e~G~~~~~~ 388 (394)
T 1k8k_B 335 EKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388 (394)
T ss_dssp CTTCCCCC----------------------------------------------
T ss_pred CCCCceEEEEecCCCcceeEEhhhHHhhCCcCCccceeecHHHHhhhCHHHHHh
Confidence 88889999999999999999999999999999 9999999999999999998
No 5
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=4.8e-53 Score=450.12 Aligned_cols=267 Identities=27% Similarity=0.479 Sum_probs=239.7
Q ss_pred CceEEEecCcc---cchHHHHHHH------hhhhhhhhhhhhhccccCCCCCCcccceeecCCCceeEEeeeCCcccccC
Q 007501 3 PFHFMFLECML---LSKINMSFLY------AITAFGVDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYRG 73 (601)
Q Consensus 3 dhpVLlTE~~~---~~Rekm~Eil------~al~~~~~sllSlya~g~~~~~~ttGLVVD~G~~~T~VvPV~eG~~l~~a 73 (601)
+||||||||++ .+|++|+|++ +++++.+++++|+|++| .++|||||+|+++|+|+||++|+++.++
T Consensus 100 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g-----~~~~lVvDiG~gtt~v~~v~~G~~~~~~ 174 (375)
T 2fxu_A 100 EHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASG-----RTTGIVLDSGDGVTHNVPIYEGYALPHA 174 (375)
T ss_dssp GSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTT-----CSSEEEEEECSSCEEEEEEETTEECGGG
T ss_pred CCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecC-----CCeEEEEEcCCCceEEeEeECCEEeccc
Confidence 68999999998 9999999998 38999999999999999 8999999999999999999999999999
Q ss_pred ceeecccchHhHHHHHHHHhccCCCCCCcccHHHHHHHHhhccccccChHHHHHHHhcCcccccccceeeEcCCCCCCCC
Q 007501 74 SCRTNIGGYHITDYLKQLLSLKHPQHMTKLTWEKVEDLKMEHCYIAPDYFSEAQLFQKGTKEAEHKTRCWQLPWVPPPTE 153 (601)
Q Consensus 74 ~~rl~iGG~~lt~yL~kLL~~k~~~~~~~~~~~~v~~IKe~~CyVa~Dy~~el~~~~~~~~~~~~~~~~~QlP~~~~~~~ 153 (601)
+.++++||.++|++|.++|..+++.+.+..+...+++||+++|||+.||..++.....
T Consensus 175 ~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~---------------------- 232 (375)
T 2fxu_A 175 IMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAAS---------------------- 232 (375)
T ss_dssp CEEESCCHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHH----------------------
T ss_pred eEEeccCHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcc----------------------
Confidence 9999999999999999999999888766667889999999999999887655321100
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHhhhcCCCCHHHHHHHHHH
Q 007501 154 EPPSEEEIARKAAIKERQGQRLREMAEAKRSSRINELENQIHGLEFLLQQLEQVEENDIAAFLSDTGYVSRQEIESTLVK 233 (601)
Q Consensus 154 ~~~t~eel~~~~err~~~~~rl~e~~~~~r~ekl~~~e~~l~~~~~l~~~~~~~~~~~~~~~L~~~g~~~~~~l~~~i~~ 233 (601)
T Consensus 233 -------------------------------------------------------------------------------- 232 (375)
T 2fxu_A 233 -------------------------------------------------------------------------------- 232 (375)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhhcchhhhhhhhhhhcccCCCCCCcCCCCccCCHHHHHHHHHhhhhccChHHHHHHHHHHHHHHHHHHHHhH
Q 007501 234 LTQSLRKAKGERKVEQAELEKTDASMNEKYPLIHIPDNMLSLEQLKEKRRQIFLKTTTEGRQRAKQKRVEEELEQEKKNQ 313 (601)
Q Consensus 234 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~i~d~~L~~~~~keKr~q~llk~~~~~r~~~k~~k~~e~~~~~~~~~ 313 (601)
T Consensus 233 -------------------------------------------------------------------------------- 232 (375)
T 2fxu_A 233 -------------------------------------------------------------------------------- 232 (375)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcccccHHHHHHHHHhhhhhhccCCCCCC
Q 007501 314 EEEERRLENPELYVEQMRAKYKELSEKIDQRKRLKTNGNHTNGNNTSGGVGRGERLNAAQRERMRLLTTAAFDRGKGEDT 393 (601)
Q Consensus 314 ~~e~~r~~~~~~w~~~~r~~~~~i~~~~~~R~~~~~~l~~~~~~~~~~~~~~~~r~s~a~~~rm~~~~~l~~~~~~~~d~ 393 (601)
.
T Consensus 233 -------------------------------------~------------------------------------------ 233 (375)
T 2fxu_A 233 -------------------------------------S------------------------------------------ 233 (375)
T ss_dssp -------------------------------------C------------------------------------------
T ss_pred -------------------------------------c------------------------------------------
Confidence 0
Q ss_pred CCCCchhhHHHHhhhcCCCCCchhhhHHHHHHHHHHHhhhhcCCCCCCCCCCCCCCccCCCCccccCCCCCeEEEeCccc
Q 007501 394 FGAKDEDWQLYKLMSRDNDDDDEEMDENEAELARISARLQEVDPTFVPKQESGPTQSAAEIPRVRPLTKEDFQIVLGVER 473 (601)
Q Consensus 394 fg~~d~dw~~y~~i~~~~d~~~~~~e~~~~~L~~le~~L~~~dp~F~~~~~~~~~~~~~~~~~~y~lpdg~~~I~Lg~ER 473 (601)
. .....|++|+| +.|.|+.||
T Consensus 234 ------------------~----------------------------------------~~~~~~~lpdg-~~i~i~~er 254 (375)
T 2fxu_A 234 ------------------S----------------------------------------SLEKSYELPDG-QVITIGNER 254 (375)
T ss_dssp ------------------S----------------------------------------TTCEEEECTTS-CEEEESTHH
T ss_pred ------------------C----------------------------------------ccCeEEECCCC-CEEEEChhh
Confidence 0 00123567887 889999999
Q ss_pred ccccccccCCCCCCCCCCCcchhHHHHhhcCCCCChhhHHhhhcCcEEecCCCCCCChHHHHHHHHHhhCCCCCCeeEee
Q 007501 474 FRCPEILFRPNWVGIDQVGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVR 553 (601)
Q Consensus 474 f~~pEiLF~Psl~g~~~~GL~e~I~~sI~~~~~~~~d~r~~L~~NIvLtGG~S~~pGf~eRL~~EL~~l~p~~~~i~V~~ 553 (601)
|+|||+||+|+++|.+..||+++|.++|. +||+++|+.|++|||||||+|+||||.+||++||..+.|...+++|+.
T Consensus 255 f~~~E~lf~p~~~~~~~~~i~~~i~~~i~---~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~ 331 (375)
T 2fxu_A 255 FRCPETLFQPSFIGMESAGIHETTYNSIM---KCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIA 331 (375)
T ss_dssp HHHHHTTTCGGGGTCCSCCHHHHHHHHHH---TSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEEC
T ss_pred eechHhhCCCccCCCCCCCHHHHHHHHHH---hCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEc
Confidence 99999999999999999999999999997 569999999999999999999999999999999999999988999999
Q ss_pred CCCCcccceehhhhhhccCCCCCccccHHHHhhhchHHHHHhhc
Q 007501 554 ALDPVLDAWRGASVYATKLQFPQQTFSRMDYYEKGENWLRRYQL 597 (601)
Q Consensus 554 ~~d~~~~aW~GgSilasl~~f~~~wITk~EYeE~G~~iv~rk~~ 597 (601)
+++|.+++|+|||++|++++|+++||||+||+|+|++|+|+|||
T Consensus 332 ~~~p~~~~w~G~si~a~l~~f~~~~itk~ey~e~G~~~~~~k~~ 375 (375)
T 2fxu_A 332 PPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 375 (375)
T ss_dssp CTTTTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGGGC----
T ss_pred CCCCCccEEcchHHhhCcccHhhceeeHHHHhhhChHHHhhhcc
Confidence 99999999999999999999999999999999999999999996
No 6
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=6.5e-50 Score=430.91 Aligned_cols=278 Identities=24% Similarity=0.350 Sum_probs=235.6
Q ss_pred CceEEEecCcc---cchHHHHHHH------hhhhhhhhhhhhhccc----cCCCCCCcccceeecCCCceeEEeeeCCcc
Q 007501 3 PFHFMFLECML---LSKINMSFLY------AITAFGVDAAFSYKYN----QQYGICNKDGLAICPGFSTTHVIPFVEGEP 69 (601)
Q Consensus 3 dhpVLlTE~~~---~~Rekm~Eil------~al~~~~~sllSlya~----g~~~~~~ttGLVVD~G~~~T~VvPV~eG~~ 69 (601)
+||||||||++ .+|+.|.|++ +++++.+++++|+|++ +...... +|||||+|+++|+|+||++|++
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~-~glVvDiG~gtt~v~~v~~G~~ 185 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTL-TGTVIDSGDGVTHVIPVAEGYV 185 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCC-CEEEEEESSSCEEEEEEETTEE
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCC-eEEEEEcCCCceEEEEeECCEE
Confidence 68999999998 9999999999 3899999999999982 1000014 9999999999999999999999
Q ss_pred cccCceeecccchHhHHHHHHHHhccCCCCCCcccHHHHHHHHhhccccccChHHHHHHHhcCcccccccceeeEcCCCC
Q 007501 70 VYRGSCRTNIGGYHITDYLKQLLSLKHPQHMTKLTWEKVEDLKMEHCYIAPDYFSEAQLFQKGTKEAEHKTRCWQLPWVP 149 (601)
Q Consensus 70 l~~a~~rl~iGG~~lt~yL~kLL~~k~~~~~~~~~~~~v~~IKe~~CyVa~Dy~~el~~~~~~~~~~~~~~~~~QlP~~~ 149 (601)
+.+++.++++||.++|++|.++|..+++.+.+..+...+++||+++|||+.||..+++.+...+
T Consensus 186 ~~~~~~~~~lGG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~---------------- 249 (418)
T 1k8k_A 186 IGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDG---------------- 249 (418)
T ss_dssp CGGGCEEESCSHHHHHHHHHHHHHTTCCCCCGGGHHHHHHHHHHHHCCCCSCHHHHHHHHHHSG----------------
T ss_pred cccceEEEeCcHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhchhcccHHHHHHhhcccc----------------
Confidence 9999999999999999999999999998887677889999999999999999877654331100
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHhhhcCCCCHHHHHH
Q 007501 150 PPTEEPPSEEEIARKAAIKERQGQRLREMAEAKRSSRINELENQIHGLEFLLQQLEQVEENDIAAFLSDTGYVSRQEIES 229 (601)
Q Consensus 150 ~~~~~~~t~eel~~~~err~~~~~rl~e~~~~~r~ekl~~~e~~l~~~~~l~~~~~~~~~~~~~~~L~~~g~~~~~~l~~ 229 (601)
T Consensus 250 -------------------------------------------------------------------------------- 249 (418)
T 1k8k_A 250 -------------------------------------------------------------------------------- 249 (418)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhhhcchhhhhhhhhhhcccCCCCCCcCCCCccCCHHHHHHHHHhhhhccChHHHHHHHHHHHHHHHHHH
Q 007501 230 TLVKLTQSLRKAKGERKVEQAELEKTDASMNEKYPLIHIPDNMLSLEQLKEKRRQIFLKTTTEGRQRAKQKRVEEELEQE 309 (601)
Q Consensus 230 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~i~d~~L~~~~~keKr~q~llk~~~~~r~~~k~~k~~e~~~~~ 309 (601)
. .....| .
T Consensus 250 ------------------~---------~~~~~~----------------------------~----------------- 257 (418)
T 1k8k_A 250 ------------------S---------KWIKQY----------------------------T----------------- 257 (418)
T ss_dssp ------------------G---------GTCEEE----------------------------E-----------------
T ss_pred ------------------c---------ccceeE----------------------------E-----------------
Confidence 0 000001 0
Q ss_pred HHhHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcccccHHHHHHHHHhhhhhhccCC
Q 007501 310 KKNQEEEERRLENPELYVEQMRAKYKELSEKIDQRKRLKTNGNHTNGNNTSGGVGRGERLNAAQRERMRLLTTAAFDRGK 389 (601)
Q Consensus 310 ~~~~~~e~~r~~~~~~w~~~~r~~~~~i~~~~~~R~~~~~~l~~~~~~~~~~~~~~~~r~s~a~~~rm~~~~~l~~~~~~ 389 (601)
+|
T Consensus 258 -----------------------------------------lp------------------------------------- 259 (418)
T 1k8k_A 258 -----------------------------------------GI------------------------------------- 259 (418)
T ss_dssp -----------------------------------------EE-------------------------------------
T ss_pred -----------------------------------------CC-------------------------------------
Confidence 21
Q ss_pred CCCCCCCCchhhHHHHhhhcCCCCCchhhhHHHHHHHHHHHhhhhcCCCCCCCCCCCCCCccCCCCccccCCCCCeEEEe
Q 007501 390 GEDTFGAKDEDWQLYKLMSRDNDDDDEEMDENEAELARISARLQEVDPTFVPKQESGPTQSAAEIPRVRPLTKEDFQIVL 469 (601)
Q Consensus 390 ~~d~fg~~d~dw~~y~~i~~~~d~~~~~~e~~~~~L~~le~~L~~~dp~F~~~~~~~~~~~~~~~~~~y~lpdg~~~I~L 469 (601)
|+ . ......|.|
T Consensus 260 ----------------------d~--------------------------~--------------------~~~~~~i~l 271 (418)
T 1k8k_A 260 ----------------------NA--------------------------I--------------------SKKEFSIDV 271 (418)
T ss_dssp ----------------------CT--------------------------T--------------------TCCEEEEEE
T ss_pred ----------------------CC--------------------------C--------------------CCcccEEEe
Confidence 00 0 000158999
Q ss_pred CcccccccccccCCCCCCCCC-CCcchhHHHHhhcCCCCChhhHHhhhcCcEEecCCCCCCChHHHHHHHHHhhC-----
Q 007501 470 GVERFRCPEILFRPNWVGIDQ-VGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIR----- 543 (601)
Q Consensus 470 g~ERf~~pEiLF~Psl~g~~~-~GL~e~I~~sI~~~~~~~~d~r~~L~~NIvLtGG~S~~pGf~eRL~~EL~~l~----- 543 (601)
+.|||+|||+||+|+++|.+. .||+++|.++|.+ ||.++|+.+++|||||||+|+||||.+||++||..++
T Consensus 272 ~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~---~~~~~~~~l~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~ 348 (418)
T 1k8k_A 272 GYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQN---CPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLK 348 (418)
T ss_dssp CTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHH---SCGGGTTHHHHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHH
T ss_pred ChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHc---CCHHHHHHHHhceEEeCCccccccHHHHHHHHHHHhhccccc
Confidence 999999999999999999885 7999999999984 6999999999999999999999999999999999886
Q ss_pred -----------CCCCCeeEeeCCCCcccceehhhhhhccCCCCCccccHHHHhhhchHHHHHhh-cc
Q 007501 544 -----------PCGAPIKVVRALDPVLDAWRGASVYATKLQFPQQTFSRMDYYEKGENWLRRYQ-LQ 598 (601)
Q Consensus 544 -----------p~~~~i~V~~~~d~~~~aW~GgSilasl~~f~~~wITk~EYeE~G~~iv~rk~-~~ 598 (601)
|..++|+|+.+++|.+++|+|||+||++++|+++||||+||+|+|++|+|+|| |+
T Consensus 349 ~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~itk~ey~e~G~~~~~~~~~f~ 415 (418)
T 1k8k_A 349 LSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFG 415 (418)
T ss_dssp HHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTSHHHHHHSEEHHHHHHHCGGGGGCCCCCS
T ss_pred cccccccccCCCCceeEEEeCCCccccceeHhHHHHHcCccHhheEEEHHHHhhhCHHHHhhhcccc
Confidence 66778999999999999999999999999999999999999999999999976 54
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=3.8e-46 Score=415.92 Aligned_cols=117 Identities=14% Similarity=0.085 Sum_probs=108.1
Q ss_pred CCceEEEecCcc---cchHHHHHHH------hhhhhhhhhhhhhccccCCCCCCcccceeecCCCceeEEeeeCCccccc
Q 007501 2 FPFHFMFLECML---LSKINMSFLY------AITAFGVDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYR 72 (601)
Q Consensus 2 ~dhpVLlTE~~~---~~Rekm~Eil------~al~~~~~sllSlya~g~~~~~~ttGLVVD~G~~~T~VvPV~eG~~l~~ 72 (601)
.+|||||||||+ .+|++|+|+| +++|++.++++|+|++|. .+||||||+|+++|||+||++|+++.+
T Consensus 220 ~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl----~ttGLVVDiG~g~T~VvPV~eG~vl~~ 295 (655)
T 4am6_A 220 NQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI----STSTCVVNIGAAETRIACVDEGTVLEH 295 (655)
T ss_dssp GGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC----SSCEEEEEECSSCEEEEEEETTEECGG
T ss_pred CCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC----CCceEEEcCCCceEEEEEEeCCEEEhh
Confidence 379999999999 9999999999 399999999999999991 389999999999999999999999999
Q ss_pred CceeecccchHhHHHHHHHHhccCC-----CCCCcccHHHHHHHHhhccccc-cCh
Q 007501 73 GSCRTNIGGYHITDYLKQLLSLKHP-----QHMTKLTWEKVEDLKMEHCYIA-PDY 122 (601)
Q Consensus 73 a~~rl~iGG~~lt~yL~kLL~~k~~-----~~~~~~~~~~v~~IKe~~CyVa-~Dy 122 (601)
+++|+++||+++|+||.++|..+|+ +|++..+.++|++|||++|||+ .|+
T Consensus 296 ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t~~e~eiVrdIKEk~CyVs~~Di 351 (655)
T 4am6_A 296 SAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDADV 351 (655)
T ss_dssp GCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTSHHHHHHHHHHHHHHCCCCGGGC
T ss_pred heeeecchHHHHHHHHHHHHHHcCCCccccCCCCcchHHHHHHHHHheEEEcccch
Confidence 9999999999999999999999976 5677788999999999999994 454
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.64 E-value=1.4e-16 Score=166.46 Aligned_cols=114 Identities=11% Similarity=-0.046 Sum_probs=90.8
Q ss_pred CceEEEecCcc---cchHHHHHHH---h--hhhhhhhhhhhhccccCCCCCCcccceeecCCCceeEEeeeCCcccccCc
Q 007501 3 PFHFMFLECML---LSKINMSFLY---A--ITAFGVDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYRGS 74 (601)
Q Consensus 3 dhpVLlTE~~~---~~Rekm~Eil---~--al~~~~~sllSlya~g~~~~~~ttGLVVD~G~~~T~VvPV~eG~~l~~a~ 74 (601)
.+++++|.|+. ..|+.|.+.+ + .+.+.++++.+.|+++.......+++|||+|+++|+|++|..|.++. .
T Consensus 95 ~~~~vitvP~~~~~~~r~~~~~a~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDiGggttdvsv~~~~~~~~--~ 172 (344)
T 1jce_A 95 KPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIVT--W 172 (344)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEEECSSCEEEEEEETTEEEE--E
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEEeCCCeEEEEEEEcCCEEe--e
Confidence 37899999998 8899999988 2 67788899999988873211236899999999999999999998774 5
Q ss_pred eeecccchHhHHHHHHHHhccCCCCCCcccHHHHHHHHhhccccccC
Q 007501 75 CRTNIGGYHITDYLKQLLSLKHPQHMTKLTWEKVEDLKMEHCYIAPD 121 (601)
Q Consensus 75 ~rl~iGG~~lt~yL~kLL~~k~~~~~~~~~~~~v~~IKe~~CyVa~D 121 (601)
..+++||.++|..|.++|..++.. .++...++.+|+.+|++..+
T Consensus 173 ~~~~lGG~~id~~l~~~l~~~~~~---~~~~~~ae~~K~~l~~~~~~ 216 (344)
T 1jce_A 173 ESIRIAGDEMDEAIVQYVRETYRV---AIGERTAERVKIEIGNVFPS 216 (344)
T ss_dssp EEESCSHHHHHHHHHHHHHHHHCE---ECCHHHHHHHHHHHCBCSCC
T ss_pred CCCCccChhHHHHHHHHHHHHhCc---ccCHHHHHHHHHHHhccCcc
Confidence 788999999999999998765321 24567788888888876543
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.02 E-value=5.7e-11 Score=125.49 Aligned_cols=91 Identities=9% Similarity=-0.136 Sum_probs=67.3
Q ss_pred ceEEEecCcc---cchHHHHHHH---h--hhhhhhhhhhhhccccCCCC-CCcccceeecCCCceeEEeeeCC------c
Q 007501 4 FHFMFLECML---LSKINMSFLY---A--ITAFGVDAAFSYKYNQQYGI-CNKDGLAICPGFSTTHVIPFVEG------E 68 (601)
Q Consensus 4 hpVLlTE~~~---~~Rekm~Eil---~--al~~~~~sllSlya~g~~~~-~~ttGLVVD~G~~~T~VvPV~eG------~ 68 (601)
..+++|.|.. ..|+.|.+.+ + .+.+...++.+.++.+.... ...+.||||+|.++|.|+.+..| .
T Consensus 136 ~~~vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~ 215 (383)
T 1dkg_D 136 TEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKT 215 (383)
T ss_dssp CEEEECBCTTCCHHHHHHHHHHHHHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CC
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCe
Confidence 4688999987 7888888888 2 56778888888877762110 13579999999999999977644 2
Q ss_pred ccccC-ceeecccchHhHHHHHHHHhc
Q 007501 69 PVYRG-SCRTNIGGYHITDYLKQLLSL 94 (601)
Q Consensus 69 ~l~~a-~~rl~iGG~~lt~yL~kLL~~ 94 (601)
....+ ....++||.+++..|.++|..
T Consensus 216 ~~v~~~~~~~~lGG~~id~~l~~~l~~ 242 (383)
T 1dkg_D 216 FEVLATNGDTHLGGEDFDSRLINYLVE 242 (383)
T ss_dssp CEEEEEEEESSCSHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 22222 345799999999999988753
No 10
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=98.85 E-value=4.6e-10 Score=123.96 Aligned_cols=90 Identities=10% Similarity=-0.064 Sum_probs=68.2
Q ss_pred ceEEEecCcc---cchHHHHHHH---h--hhhhhhhhhhhhccccCCCCCCcccceeecCCCceeEEeee--CCcc-ccc
Q 007501 4 FHFMFLECML---LSKINMSFLY---A--ITAFGVDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFV--EGEP-VYR 72 (601)
Q Consensus 4 hpVLlTE~~~---~~Rekm~Eil---~--al~~~~~sllSlya~g~~~~~~ttGLVVD~G~~~T~VvPV~--eG~~-l~~ 72 (601)
+.+++|.|+. ..|+.|.+.+ + .+.+.+.+..|.+++|.......+.||+|+|+++|.|..+- +|.. +..
T Consensus 110 ~~~VitvPa~~~~~qr~a~~~a~~~AGl~~~~li~Ep~AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a 189 (509)
T 2v7y_A 110 TRAVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKA 189 (509)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEecCHHHHHHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEE
Confidence 6799999997 8899888887 2 56778888888777762111135899999999999999665 3533 333
Q ss_pred CceeecccchHhHHHHHHHHh
Q 007501 73 GSCRTNIGGYHITDYLKQLLS 93 (601)
Q Consensus 73 a~~rl~iGG~~lt~yL~kLL~ 93 (601)
.....++||.+++..|.++|.
T Consensus 190 ~~g~~~lGG~d~d~~l~~~l~ 210 (509)
T 2v7y_A 190 TAGDNHLGGDDFDQVIIDYLV 210 (509)
T ss_dssp EEEETTCSHHHHHHHHHHHHH
T ss_pred ecCCCCcCHHHHHHHHHHHHH
Confidence 345579999999999998875
No 11
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=98.60 E-value=1.2e-08 Score=107.78 Aligned_cols=90 Identities=10% Similarity=-0.064 Sum_probs=65.1
Q ss_pred ceEEEecCcc---cchHHHHHHH---h--hhhhhhhhhhhhccccCC-CCCCcccceeecCCCceeEE--eeeCCccccc
Q 007501 4 FHFMFLECML---LSKINMSFLY---A--ITAFGVDAAFSYKYNQQY-GICNKDGLAICPGFSTTHVI--PFVEGEPVYR 72 (601)
Q Consensus 4 hpVLlTE~~~---~~Rekm~Eil---~--al~~~~~sllSlya~g~~-~~~~ttGLVVD~G~~~T~Vv--PV~eG~~l~~ 72 (601)
..+++|.|+. ..|+.|.+.+ + .+.+.+.++.+.++.+.. .....+-+|||+|.++|.|. .+.+|..-..
T Consensus 154 ~~~vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~ 233 (394)
T 3qfu_A 154 THAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQ 233 (394)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEE
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEE
Confidence 5789999997 8888888877 2 567788888888777621 11123459999999999554 4445544333
Q ss_pred Ccee-ecccchHhHHHHHHHHh
Q 007501 73 GSCR-TNIGGYHITDYLKQLLS 93 (601)
Q Consensus 73 a~~r-l~iGG~~lt~yL~kLL~ 93 (601)
+..+ .++||.+++..|.++|.
T Consensus 234 ~~~~~~~lGG~~~d~~l~~~l~ 255 (394)
T 3qfu_A 234 ATSGDTHLGGEDFDYKIVRQLI 255 (394)
T ss_dssp EEEEETTCSHHHHHHHHHHHHH
T ss_pred EEcCCCCCChHHHHHHHHHHHH
Confidence 3344 79999999999988874
No 12
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=98.09 E-value=3.9e-06 Score=84.08 Aligned_cols=96 Identities=14% Similarity=0.117 Sum_probs=76.4
Q ss_pred eEEEecCcc---cchHHHHHHH---h--hhhhhhhhhhhhccccCCCCCCcccceeecCCCceeEEeeeCCcccccCcee
Q 007501 5 HFMFLECML---LSKINMSFLY---A--ITAFGVDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYRGSCR 76 (601)
Q Consensus 5 pVLlTE~~~---~~Rekm~Eil---~--al~~~~~sllSlya~g~~~~~~ttGLVVD~G~~~T~VvPV~eG~~l~~a~~r 76 (601)
.+++|.|.. ..|+.+.+++ + ...+..++..++++.| ..+++|||+|+++|.++++.+|.++ ....
T Consensus 94 ~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~-----~~~~~viDiGggst~~~~~~~g~~~--~~~~ 166 (272)
T 3h1q_A 94 QAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALG-----INDGIVVDIGGGTTGIAVIEKGKIT--ATFD 166 (272)
T ss_dssp EEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHT-----CSSEEEEEECSSCEEEEEEETTEEE--EECC
T ss_pred eEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHc-----CCCEEEEEECCCcEEEEEEECCEEE--EEec
Confidence 355666664 5565555555 2 5567778888888888 6789999999999999999999887 3577
Q ss_pred ecccchHhHHHHHHHHhccCCCCCCcccHHHHHHHHhhcc
Q 007501 77 TNIGGYHITDYLKQLLSLKHPQHMTKLTWEKVEDLKMEHC 116 (601)
Q Consensus 77 l~iGG~~lt~yL~kLL~~k~~~~~~~~~~~~v~~IKe~~C 116 (601)
+++||.++|++|.+.|. .+.+.++.+|+++|
T Consensus 167 ~~~Gg~~~~~~l~~~l~---------~~~~~ae~~k~~~~ 197 (272)
T 3h1q_A 167 EPTGGTHLSLVLAGSYK---------IPFEEAETIKKDFS 197 (272)
T ss_dssp BSCCHHHHHHHHHHHHT---------CCHHHHHHHHHSST
T ss_pred CCCcHHHHHHHHHHHhC---------CCHHHHHHHHHhcC
Confidence 89999999999999884 46788999999877
No 13
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=97.31 E-value=5.8e-05 Score=75.45 Aligned_cols=61 Identities=20% Similarity=0.325 Sum_probs=48.4
Q ss_pred CcchhHHHHhhcCCCCChhhHHhhhcCcEEecCCCCCCChHHHHHHHHHhhCCCCCCeeEeeCCCCcccceehhhhhh
Q 007501 492 GLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYA 569 (601)
Q Consensus 492 GL~e~I~~sI~~~~~~~~d~r~~L~~NIvLtGG~S~~pGf~eRL~~EL~~l~p~~~~i~V~~~~d~~~~aW~GgSila 569 (601)
++.+.|..+|.+ ++ ...+|+|+||+|++|||.++|++++. +.|..+++|.+++|+|++++|
T Consensus 212 ~i~~~i~~~l~~---~~------~~~~ivL~GG~a~~~~l~~~l~~~l~--------~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 212 KMALIVKEVIKN---YD------QTLPVYVVGGTAYLTGFSEEFSRFLG--------KEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp HHHHHHHHHTTT---SC------SSCCEEEESGGGGSTTHHHHHHHHHS--------SCCBCCSSGGGHHHHHHHTTC
T ss_pred HHHHHHHHHHHh---cC------CCCEEEEECCccchhhHHHHHHHHhC--------CCccccCChHHHHHHHHHhcC
Confidence 466777777763 33 24599999999999999999999983 234457789999999999875
No 14
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=96.66 E-value=0.0017 Score=67.84 Aligned_cols=86 Identities=12% Similarity=0.054 Sum_probs=58.4
Q ss_pred hhhhhhhhhhhhccccC--CCCCCcccceeecCCCceeEEeeeCCcccccCceeecccchHhHHHHHHHHhccCCCCCCc
Q 007501 25 ITAFGVDAAFSYKYNQQ--YGICNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSLKHPQHMTK 102 (601)
Q Consensus 25 al~~~~~sllSlya~g~--~~~~~ttGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~iGG~~lt~yL~kLL~~k~~~~~~~ 102 (601)
-..+.+.++.+.++.+. ........+|||+|.++|.|+.+.+|.++. ...+++||.++|+.+.+-+ .
T Consensus 167 ~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~~--~~~~~~GG~~i~~~i~~~~---------~ 235 (377)
T 2ych_A 167 PVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLA--VRVLTLSGKDFTEAIARSF---------N 235 (377)
T ss_dssp EEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEEE--EEEESCSHHHHHHHHHHHT---------T
T ss_pred eEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEEE--EEeeechHHHHHHHHHHHh---------C
Confidence 33445555555554430 000023459999999999999999998764 5678999999999998743 2
Q ss_pred ccHHHHHHHHhhccccccC
Q 007501 103 LTWEKVEDLKMEHCYIAPD 121 (601)
Q Consensus 103 ~~~~~v~~IKe~~CyVa~D 121 (601)
++...++.+|+.+|++..+
T Consensus 236 ~~~~~aE~~K~~~~~~~~~ 254 (377)
T 2ych_A 236 LDLLAAEEVKRTYGMATLP 254 (377)
T ss_dssp CCHHHHHHHHHHTC-----
T ss_pred CCHHHHHHHHhhccccccc
Confidence 3578899999999987543
No 15
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=96.40 E-value=0.004 Score=65.70 Aligned_cols=91 Identities=12% Similarity=-0.039 Sum_probs=65.4
Q ss_pred ceEEEecCcc---cchHHHHHHH---h--hhhhhhhhhhhhccccCCCC----CCcccceeecCCCceeEEeee--CCcc
Q 007501 4 FHFMFLECML---LSKINMSFLY---A--ITAFGVDAAFSYKYNQQYGI----CNKDGLAICPGFSTTHVIPFV--EGEP 69 (601)
Q Consensus 4 hpVLlTE~~~---~~Rekm~Eil---~--al~~~~~sllSlya~g~~~~----~~ttGLVVD~G~~~T~VvPV~--eG~~ 69 (601)
..++||-|+. ..|+.|.+.. + .+.+.+.+..+.++.+.... ...+-+|||+|.++|.|.-+- +|..
T Consensus 159 ~~~vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~ 238 (404)
T 3i33_A 159 HSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIF 238 (404)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEE
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeE
Confidence 4689999987 8888888877 2 56677788888777762111 134569999999999997653 3322
Q ss_pred -cccCceeecccchHhHHHHHHHHhc
Q 007501 70 -VYRGSCRTNIGGYHITDYLKQLLSL 94 (601)
Q Consensus 70 -l~~a~~rl~iGG~~lt~yL~kLL~~ 94 (601)
+.......++||.+++..|.+.|..
T Consensus 239 ~v~~~~~~~~lGG~~~d~~l~~~l~~ 264 (404)
T 3i33_A 239 EVKSTAGDTHLGGEDFDNRMVSHLAE 264 (404)
T ss_dssp EEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 2333445799999999999888843
No 16
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=96.26 E-value=0.00066 Score=71.75 Aligned_cols=87 Identities=22% Similarity=0.246 Sum_probs=61.0
Q ss_pred eEEEeCcccccccccccCCCCCCCCCCCcchhHHHHhhcCCCCChhhHHhhhcCcEEecCCCCCCChHHHHHHHHHhhCC
Q 007501 465 FQIVLGVERFRCPEILFRPNWVGIDQVGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIRP 544 (601)
Q Consensus 465 ~~I~Lg~ERf~~pEiLF~Psl~g~~~~GL~e~I~~sI~~~~~~~~d~r~~L~~NIvLtGG~S~~pGf~eRL~~EL~~l~p 544 (601)
..+.|..+.| |-+|.|. ...+.+.|..+|..+ .........|+|+||+|.+|++.++|+..+..
T Consensus 314 ~~~~i~r~~~---~~~~~~~-----~~~i~~~i~~~l~~~-----~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~--- 377 (404)
T 3i33_A 314 FYTSITRARF---EELNADL-----FRGTLEPVEKALRDA-----KLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNG--- 377 (404)
T ss_dssp EEEEEEHHHH---HHHTHHH-----HHHTHHHHHHHHHHH-----TCCGGGCCEEEEESGGGGCHHHHHHHHHHTTT---
T ss_pred eEEEEcHHHH---HHHHHHH-----HHHHHHHHHHHHHHc-----CCCHhhCCEEEEECCccccHHHHHHHHHHcCC---
Confidence 3455555555 3455553 134667777777532 22234568899999999999999999987631
Q ss_pred CCCCeeEeeCCCCcccceehhhhhhcc
Q 007501 545 CGAPIKVVRALDPVLDAWRGASVYATK 571 (601)
Q Consensus 545 ~~~~i~V~~~~d~~~~aW~GgSilasl 571 (601)
..|..+.+|..++|+|++++|.+
T Consensus 378 ----~~v~~~~~p~~ava~Gaa~~a~~ 400 (404)
T 3i33_A 378 ----KELNKSINPDEAVAYGAAVQAAI 400 (404)
T ss_dssp ----CCCBCSSCTTTHHHHHHHHHHHH
T ss_pred ----CCCCCCcCHHHHHHHHHHHHHHH
Confidence 24556678999999999999864
No 17
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=95.21 E-value=0.0042 Score=69.89 Aligned_cols=85 Identities=15% Similarity=0.139 Sum_probs=61.1
Q ss_pred EEEeCcccccccccccCCCCCCCCCCCcchhHHHHhhcCCCCChhhHHhhhcCcEEecCCCCCCChHHHHHHHHHhhCCC
Q 007501 466 QIVLGVERFRCPEILFRPNWVGIDQVGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIRPC 545 (601)
Q Consensus 466 ~I~Lg~ERf~~pEiLF~Psl~g~~~~GL~e~I~~sI~~~~~~~~d~r~~L~~NIvLtGG~S~~pGf~eRL~~EL~~l~p~ 545 (601)
.+.|..+.| |-+|.|.+ ..+...|..+|..+ . +...-...|+|+||+|.+|++.++|...+..
T Consensus 297 ~~~itr~~f---e~l~~~~~-----~~i~~~i~~~L~~a---~--~~~~~i~~VvLvGG~srip~v~~~l~~~fg~---- 359 (605)
T 2kho_A 297 NIKVTRAKL---ESLVEDLV-----NRSIEPLKVALQDA---G--LSVSDIDDVILVGGQTRMPMVQKKVAEFFGK---- 359 (605)
T ss_dssp EEEEEHHHH---HTTCCSTT-----GGGTSHHHHHHHTT---T--CCTTTCSEEEEESGGGGSHHHHHHHHHHHSS----
T ss_pred EEEEeHHHH---HHHHHHHH-----HHHHHHHHHHHHHc---C--CChhhCceEEEECCcccChHHHHHHHHhcCC----
Confidence 345665555 35666643 35777888888632 2 2234458999999999999999999988731
Q ss_pred CCCeeEeeCCCCcccceehhhhhhcc
Q 007501 546 GAPIKVVRALDPVLDAWRGASVYATK 571 (601)
Q Consensus 546 ~~~i~V~~~~d~~~~aW~GgSilasl 571 (601)
.+..+.+|..++|.||+++|..
T Consensus 360 ----~~~~~~npd~aVA~GAa~~a~~ 381 (605)
T 2kho_A 360 ----EPRKDVNPDEAVAIGAAVQGGV 381 (605)
T ss_dssp ----CCBCSSCTTTHHHHHHHHHHTT
T ss_pred ----CcCcCCCcchHHHHHHHHHHHH
Confidence 2345668899999999999864
No 18
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=95.05 E-value=0.026 Score=62.70 Aligned_cols=90 Identities=10% Similarity=-0.063 Sum_probs=64.2
Q ss_pred ceEEEecCcc---cchHHHHHHH---h--hhhhhhhhhhhhccccCCC--CCCcccceeecCCCceeEEeee--CCcc-c
Q 007501 4 FHFMFLECML---LSKINMSFLY---A--ITAFGVDAAFSYKYNQQYG--ICNKDGLAICPGFSTTHVIPFV--EGEP-V 70 (601)
Q Consensus 4 hpVLlTE~~~---~~Rekm~Eil---~--al~~~~~sllSlya~g~~~--~~~ttGLVVD~G~~~T~VvPV~--eG~~-l 70 (601)
..+++|-|.. ..|+.|.+.. + .+.+.+.+..+.++.|... ....+.+|+|+|.++|.|.-+- +|.. +
T Consensus 140 ~~~VitVPa~f~~~qr~a~~~A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v 219 (554)
T 1yuw_A 140 TNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEV 219 (554)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEE
Confidence 3578999987 7888888777 2 5566677776666655210 0135789999999999998665 5643 2
Q ss_pred ccCceeecccchHhHHHHHHHHh
Q 007501 71 YRGSCRTNIGGYHITDYLKQLLS 93 (601)
Q Consensus 71 ~~a~~rl~iGG~~lt~yL~kLL~ 93 (601)
.......++||.+++..|...|.
T Consensus 220 ~a~~g~~~lGG~d~d~~l~~~l~ 242 (554)
T 1yuw_A 220 KSTAGDTHLGGEDFDNRMVNHFI 242 (554)
T ss_dssp EEEEEETTCSHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCHHHHHHHHHHHHH
Confidence 33445579999999998887774
No 19
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=94.99 E-value=0.012 Score=63.18 Aligned_cols=81 Identities=15% Similarity=0.202 Sum_probs=59.7
Q ss_pred hhhhhhhhhhccccCCCCCCcccceeecCCCceeEEeeeCCcccccCceeecccchHhHHHHHHHHhccCCCCCCcccHH
Q 007501 27 AFGVDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSLKHPQHMTKLTWE 106 (601)
Q Consensus 27 ~~~~~sllSlya~g~~~~~~ttGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~iGG~~lt~yL~kLL~~k~~~~~~~~~~~ 106 (601)
.+...++.+.++...........+|||+|.++|.|.-+.+|.++. ..-+++||.++|+-+.+.|. .+.+
T Consensus 186 ~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~~--~~~i~~GG~~it~dIa~~l~---------~~~~ 254 (419)
T 4a2a_A 186 QLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIK--ISYVPVGMKHVIKDVSAVLD---------TSFE 254 (419)
T ss_dssp EEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEEE--EEEESCCHHHHHHHHHHHHT---------CCHH
T ss_pred EEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEEE--EEecccHHHHHHHHHHHHHC---------CCHH
Confidence 344555555554441101123689999999999999999998765 45689999999999988763 4678
Q ss_pred HHHHHHhhcccc
Q 007501 107 KVEDLKMEHCYI 118 (601)
Q Consensus 107 ~v~~IKe~~CyV 118 (601)
.++.||.+++..
T Consensus 255 ~AE~iK~~~g~a 266 (419)
T 4a2a_A 255 ESERLIITHGNA 266 (419)
T ss_dssp HHHHHHHHHCCS
T ss_pred HHHHHHHHhccC
Confidence 999999998764
No 20
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=94.53 E-value=0.0064 Score=67.61 Aligned_cols=86 Identities=20% Similarity=0.268 Sum_probs=58.7
Q ss_pred eEEEeCcccccccccccCCCCCCCCCCCcchhHHHHhhcCCCCChhhHHhhhcCcEEecCCCCCCChHHHHHHHHHhhCC
Q 007501 465 FQIVLGVERFRCPEILFRPNWVGIDQVGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIRP 544 (601)
Q Consensus 465 ~~I~Lg~ERf~~pEiLF~Psl~g~~~~GL~e~I~~sI~~~~~~~~d~r~~L~~NIvLtGG~S~~pGf~eRL~~EL~~l~p 544 (601)
..+.|..+.|. -+|.|.+ ..+.+.|..+|..+ .+.+.-...|+|+||+|.+|++.++|...+..
T Consensus 293 ~~~~ltr~~~e---~l~~~~~-----~~i~~~i~~~L~~a-----~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~--- 356 (554)
T 1yuw_A 293 FYTSITRARFE---ELNADLF-----RGTLDPVEKALRDA-----KLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNG--- 356 (554)
T ss_dssp EEEEEEHHHHH---HHTHHHH-----HHTTHHHHHHHHHT-----TCCGGGCCEEEEESGGGGCHHHHHHHHHHTTT---
T ss_pred EEEEEEHHHHH---HHHHHHH-----HHHHHHHHHHHHHc-----CCChhhCcEEEEECCcccChHHHHHHHHHcCC---
Confidence 45566655552 3444421 23556777777632 12234568999999999999999999887642
Q ss_pred CCCCeeEeeCCCCcccceehhhhhhc
Q 007501 545 CGAPIKVVRALDPVLDAWRGASVYAT 570 (601)
Q Consensus 545 ~~~~i~V~~~~d~~~~aW~GgSilas 570 (601)
..|..+.+|..++|.||+++|.
T Consensus 357 ----~~v~~~~np~~aVA~Gaa~~a~ 378 (554)
T 1yuw_A 357 ----KELNKSINPDEAVAYGAAVQAA 378 (554)
T ss_dssp ----CCCBCCSCTTTHHHHHHHHHHH
T ss_pred ----CccccCCCchhHHHHHHHHHHH
Confidence 1344567899999999999985
No 21
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=94.32 E-value=0.026 Score=57.90 Aligned_cols=85 Identities=15% Similarity=-0.079 Sum_probs=59.0
Q ss_pred hhhhhhhhhhhccccCCCCCCcccceeecCCCceeEEeeeCCccccc-CceeecccchHhHHHHHHHHhccCCCCCCccc
Q 007501 26 TAFGVDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYR-GSCRTNIGGYHITDYLKQLLSLKHPQHMTKLT 104 (601)
Q Consensus 26 l~~~~~sllSlya~g~~~~~~ttGLVVD~G~~~T~VvPV~eG~~l~~-a~~rl~iGG~~lt~yL~kLL~~k~~~~~~~~~ 104 (601)
+.+.++++.+.++.+.......+.+|||+|+++|.+.-+.+|.+... ...-+++||.++++-+.+.|..++ . .++
T Consensus 143 v~~~~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~~--~--~i~ 218 (320)
T 2zgy_A 143 VKVMPESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLAR--T--KGS 218 (320)
T ss_dssp EEEEESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCCS--B--GGG
T ss_pred EEEecCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHcC--C--CCC
Confidence 44456666666554311111356899999999999999998876444 456779999999999999887542 1 345
Q ss_pred HHHHHHH-Hhh
Q 007501 105 WEKVEDL-KME 114 (601)
Q Consensus 105 ~~~v~~I-Ke~ 114 (601)
...++.+ |..
T Consensus 219 ~~~ae~~lk~~ 229 (320)
T 2zgy_A 219 SYLADDIIIHR 229 (320)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHh
Confidence 6667777 554
No 22
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=94.06 E-value=0.055 Score=60.76 Aligned_cols=113 Identities=12% Similarity=-0.068 Sum_probs=72.7
Q ss_pred eEEEecCcc---cchHHHHHHH---h--hhhhhhhhhhhhccccCCCC-CCcccceeecCCCceeEEeeeC------Ccc
Q 007501 5 HFMFLECML---LSKINMSFLY---A--ITAFGVDAAFSYKYNQQYGI-CNKDGLAICPGFSTTHVIPFVE------GEP 69 (601)
Q Consensus 5 pVLlTE~~~---~~Rekm~Eil---~--al~~~~~sllSlya~g~~~~-~~ttGLVVD~G~~~T~VvPV~e------G~~ 69 (601)
.+++|-|.. ..|+.+.+.. + .+.+.+.+..+.+++|.... ...+.||+|+|.|+|.|.-+-- |..
T Consensus 137 ~~VitVPa~f~d~qr~a~~~A~~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~ 216 (605)
T 2kho_A 137 EAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTF 216 (605)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEE
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeE
Confidence 578899887 7788887777 2 45566777666665552110 1356899999999999987763 422
Q ss_pred -cccCceeecccchHhHHHHHHHHhcc-----CCCCCCc-c----cHHHHHHHHhhccc
Q 007501 70 -VYRGSCRTNIGGYHITDYLKQLLSLK-----HPQHMTK-L----TWEKVEDLKMEHCY 117 (601)
Q Consensus 70 -l~~a~~rl~iGG~~lt~yL~kLL~~k-----~~~~~~~-~----~~~~v~~IKe~~Cy 117 (601)
+.....-.++||.+++..|..+|..+ +..+... . -...++.+|+.++.
T Consensus 217 ~v~a~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~ 275 (605)
T 2kho_A 217 EVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSS 275 (605)
T ss_dssp EEEEEEEESSCSGGGTHHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTS
T ss_pred EEEEECCCCCccHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCC
Confidence 22223346899999999998877553 2222110 0 02456777777764
No 23
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=93.92 E-value=0.04 Score=57.88 Aligned_cols=73 Identities=12% Similarity=-0.073 Sum_probs=56.0
Q ss_pred hhhhhhhhhhhhccccCCC-C-----CCcccceeecCCCceeEEeeeCCcccccCceeecccchHhHHHHHHHHhccCC
Q 007501 25 ITAFGVDAAFSYKYNQQYG-I-----CNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSLKHP 97 (601)
Q Consensus 25 al~~~~~sllSlya~g~~~-~-----~~ttGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~iGG~~lt~yL~kLL~~k~~ 97 (601)
.+.+.++++-++|+.+... . .....+|||+|+++|.++-+.+|.++...+..+++||..+++-+.+.|..++.
T Consensus 156 ~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~~~ 234 (355)
T 3js6_A 156 GVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSKKSE 234 (355)
T ss_dssp EEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC----
T ss_pred EEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHHhcC
Confidence 4566788888888764110 0 13467899999999999999888888888889999999999999999987643
No 24
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=93.89 E-value=0.026 Score=58.56 Aligned_cols=79 Identities=10% Similarity=-0.102 Sum_probs=61.8
Q ss_pred chHHHHHHH-h------------------hhhhhhhhhhhhccccCCCCCCcccceeecCCCceeEEeeeCCcccccCce
Q 007501 15 SKINMSFLY-A------------------ITAFGVDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYRGSC 75 (601)
Q Consensus 15 ~Rekm~Eil-~------------------al~~~~~sllSlya~g~~~~~~ttGLVVD~G~~~T~VvPV~eG~~l~~a~~ 75 (601)
.|+.+.+.| + .+.+.++++-++|.... .....+.+|||+|+++|.+.-+.+|.++...+.
T Consensus 122 ~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~~-~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~ 200 (329)
T 4apw_A 122 AKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQE-NFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERF 200 (329)
T ss_dssp TTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSCC-CCTTCEEEEEEECSSCEEEEEEETTEECGGGCE
T ss_pred HHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcch-hhccCCEEEEEeCCCcEEEEEEECCEEeecccc
Confidence 478888888 1 24456777777776521 111356799999999999999999998877788
Q ss_pred eecccchHhHHHHHHHHhc
Q 007501 76 RTNIGGYHITDYLKQLLSL 94 (601)
Q Consensus 76 rl~iGG~~lt~yL~kLL~~ 94 (601)
.+++||.++++-+.+.|..
T Consensus 201 ~~~~G~~~~~~~i~~~l~~ 219 (329)
T 4apw_A 201 IEEHGVKDLIIRVGDALTD 219 (329)
T ss_dssp EESCCHHHHHHHHHTSSSS
T ss_pred chhhHHHHHHHHHHHHHHh
Confidence 8999999999999998876
No 25
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=93.86 E-value=0.046 Score=56.96 Aligned_cols=89 Identities=18% Similarity=-0.002 Sum_probs=60.6
Q ss_pred EecCcc---cchHHHHHHH-hh------------------hhhhhhhhhhhccc--cCCCC-CCcccceeecCCCceeEE
Q 007501 8 FLECML---LSKINMSFLY-AI------------------TAFGVDAAFSYKYN--QQYGI-CNKDGLAICPGFSTTHVI 62 (601)
Q Consensus 8 lTE~~~---~~Rekm~Eil-~a------------------l~~~~~sllSlya~--g~~~~-~~ttGLVVD~G~~~T~Vv 62 (601)
++=|.. ..|+.+.+.+ +. +.+.+++..+.++. +.... ...+-+|||+|.++|.|.
T Consensus 126 i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~ 205 (346)
T 2fsj_A 126 SGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVL 205 (346)
T ss_dssp EEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEE
T ss_pred ccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHHHHHHHhhccccccccCCcEEEEECCCCcEEEE
Confidence 566664 5677776665 21 44556666666653 21000 013449999999999999
Q ss_pred eee--CCcccccCceeecccchHhHHHHHHHHhccC
Q 007501 63 PFV--EGEPVYRGSCRTNIGGYHITDYLKQLLSLKH 96 (601)
Q Consensus 63 PV~--eG~~l~~a~~rl~iGG~~lt~yL~kLL~~k~ 96 (601)
-+. +|.++...+.-+++||.++++.+.+.+..+|
T Consensus 206 vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~~~ 241 (346)
T 2fsj_A 206 TINLMDMEPVVELSFSLQIGVGDAISALSRKIAKET 241 (346)
T ss_dssp EEETTTTEECGGGCEEESCCHHHHHHHHHHHHHHHH
T ss_pred EEEecCCEEEeecCCCcchhHHHHHHHHHHHHHHHh
Confidence 888 7776665578889999999999987776554
No 26
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=93.29 E-value=0.0052 Score=64.15 Aligned_cols=46 Identities=17% Similarity=0.195 Sum_probs=33.3
Q ss_pred CcchhHHHHhhcCCCCChhhHHhhhcCcEEecCCCCCCChHHHHHHHHH
Q 007501 492 GLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIR 540 (601)
Q Consensus 492 GL~e~I~~sI~~~~~~~~d~r~~L~~NIvLtGG~S~~pGf~eRL~~EL~ 540 (601)
.|.+.|..+|..+ +.........+|+||||+|++|||.++|.+.+.
T Consensus 286 ~i~~~i~~~l~~~---~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~ 331 (377)
T 2ych_A 286 ELTQELRRSLEFF---RIQLEEASPEVGYLLGGGSKLRGLASLLTDTLG 331 (377)
T ss_dssp HHHHHHHHHHHHH---HHHC---CCSEEEEESGGGGSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH---HhccCCCCcCEEEEECccccchhHHHHHHHHhC
Confidence 3556666666522 334455678999999999999999999999985
No 27
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=93.12 E-value=0.023 Score=56.80 Aligned_cols=66 Identities=18% Similarity=0.297 Sum_probs=49.5
Q ss_pred CCcchhHHHHhhcCCCCChhhHHhhhcCcEEecCCCCCCChHHHHHHHHHhhCCCCCCeeEeeCCCCcccceehhhhhh
Q 007501 491 VGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYA 569 (601)
Q Consensus 491 ~GL~e~I~~sI~~~~~~~~d~r~~L~~NIvLtGG~S~~pGf~eRL~~EL~~l~p~~~~i~V~~~~d~~~~aW~GgSila 569 (601)
.|+.+.|...+. ..-.+......|+|+||.|..|++.++|.+.+. .+++.|++|.+.+=+|++++|
T Consensus 187 a~~~~~v~~~l~-----~~~~~~~~~~~vvl~GGva~n~~lr~~l~~~~g--------~~~~~p~~p~~~~A~GAAl~A 252 (276)
T 4ehu_A 187 AGIHTSVAKRVS-----SLVKRIGVQRNVVMVGGVARNSGIVRAMAREIN--------TEIIVPDIPQLTGALGAALYA 252 (276)
T ss_dssp HHHHHHHHHHHH-----HHHHHHCCCSSEEEESGGGGCHHHHHHHHHHHT--------SCEECCSSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HHHHhcccCCeEEEecCccchHHHHHHHHHHHC--------CCeeeCCCcchHHHHHHHHHH
Confidence 355555555553 233445566889999999999999999987652 456778889888779999988
No 28
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=92.70 E-value=0.03 Score=63.84 Aligned_cols=85 Identities=13% Similarity=0.172 Sum_probs=59.9
Q ss_pred eEEEeCcccccccccccCCCCCCCCCCCcchhHHHHhhcCCCCChhhHHhhhcCcEEecCCCCCCChHHHHHHHHHhhCC
Q 007501 465 FQIVLGVERFRCPEILFRPNWVGIDQVGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIRP 544 (601)
Q Consensus 465 ~~I~Lg~ERf~~pEiLF~Psl~g~~~~GL~e~I~~sI~~~~~~~~d~r~~L~~NIvLtGG~S~~pGf~eRL~~EL~~l~p 544 (601)
..+.|..+.|. -+|.|-+ ..+...|..+|..+ +.+ ..-...|+|+||+|.+|++.++|...+.
T Consensus 297 ~~~~itr~~fe---~l~~~l~-----~~i~~~i~~~L~~a-~l~----~~~I~~VvLvGGssriP~v~~~l~~~fg---- 359 (675)
T 3d2f_A 297 VSSQLSREELE---ELVKPLL-----ERVTEPVTKALAQA-KLS----AEEVDFVEIIGGTTRIPTLKQSISEAFG---- 359 (675)
T ss_dssp EEEEEEHHHHH---HHTHHHH-----TTTTHHHHHHHHHH-TCC----GGGCCEEEEESGGGGSHHHHHHHHHHHT----
T ss_pred EEEEEeHHHHH---HHHHHHH-----HHHHHHHHHHHHHh-CCC----hhhCcEEEEECCCccChHHHHHHHHhcC----
Confidence 56677666653 4555531 34667777777532 122 2235789999999999999999988873
Q ss_pred CCCCeeEeeCCCCcccceehhhhhhc
Q 007501 545 CGAPIKVVRALDPVLDAWRGASVYAT 570 (601)
Q Consensus 545 ~~~~i~V~~~~d~~~~aW~GgSilas 570 (601)
..+..+.+|..++++||+++|.
T Consensus 360 ----~~~~~~~nPdeaVA~GAa~~a~ 381 (675)
T 3d2f_A 360 ----KPLSTTLNQDEAIAKGAAFICA 381 (675)
T ss_dssp ----SCEECCSCTTTHHHHHHHHHHH
T ss_pred ----CCccccCCcchHHHHHHHHHHH
Confidence 1244567899999999999886
No 29
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=92.37 E-value=0.016 Score=61.27 Aligned_cols=88 Identities=18% Similarity=0.331 Sum_probs=57.8
Q ss_pred EEEeCcccccccccccCCCCCCCCCCCcchhHHHHhhcCCCCChhhHHhhhcCcEEecCCCCCCChHHHHHHHHHhhCCC
Q 007501 466 QIVLGVERFRCPEILFRPNWVGIDQVGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIRPC 545 (601)
Q Consensus 466 ~I~Lg~ERf~~pEiLF~Psl~g~~~~GL~e~I~~sI~~~~~~~~d~r~~L~~NIvLtGG~S~~pGf~eRL~~EL~~l~p~ 545 (601)
.+.|..+.| |-+|.|.+ ..|.++|..+|... .........|+|+||+|.+|++.++|+..+..
T Consensus 308 ~~~itr~~~---~~~~~~~~-----~~i~~~i~~~l~~~-----~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~---- 370 (409)
T 4gni_A 308 ASTINRLRY---ETIARTVF-----EGFNRLVESAVKKA-----GLDPLDVDEVIMSGGTSNTPRIAANFRYIFPE---- 370 (409)
T ss_dssp EEEEEHHHH---HHHTHHHH-----HHHHHHHHHHHHHT-----TCCGGGCCEEEEESGGGGCHHHHHHHHHHSCT----
T ss_pred EEEeeHHHH---HHHHHHHH-----HHHHHHHHHHHHHc-----CCCHHHCCEEEEECCccccHHHHHHHHHHcCC----
Confidence 444544444 24455531 24556666776532 12233458899999999999999999877632
Q ss_pred CCCeeE------eeCCCCcccceehhhhhhccC
Q 007501 546 GAPIKV------VRALDPVLDAWRGASVYATKL 572 (601)
Q Consensus 546 ~~~i~V------~~~~d~~~~aW~GgSilasl~ 572 (601)
.++| ..+.+|..++=.||+++|...
T Consensus 371 --~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~ 401 (409)
T 4gni_A 371 --STRILAPSTDPSALNPSELQARGAALQASLI 401 (409)
T ss_dssp --TSEEESTTTCTTCCCTTTHHHHHHHHHHHHH
T ss_pred --ccccccccccCCCcCHHHHHHHHHHHHhhhh
Confidence 2345 344578889999999998753
No 30
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=92.14 E-value=0.085 Score=60.11 Aligned_cols=89 Identities=10% Similarity=-0.015 Sum_probs=61.1
Q ss_pred eEEEecCcc---cchHHHHHHH---h--hhhhhhhhhhhhccccC-----CC--CCCcccceeecCCCceeEEeee--CC
Q 007501 5 HFMFLECML---LSKINMSFLY---A--ITAFGVDAAFSYKYNQQ-----YG--ICNKDGLAICPGFSTTHVIPFV--EG 67 (601)
Q Consensus 5 pVLlTE~~~---~~Rekm~Eil---~--al~~~~~sllSlya~g~-----~~--~~~ttGLVVD~G~~~T~VvPV~--eG 67 (601)
.++||-|.. ..|+.|.+.. + .+.+.+.+..+.+++|. +. ....+.+|+|+|.|+|.|.-+- +|
T Consensus 140 ~~VITVPa~f~~~qR~a~~~Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g 219 (675)
T 3d2f_A 140 DVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKG 219 (675)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETT
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCC
Confidence 578999887 7788887776 2 44555666555544431 00 1135789999999999997664 56
Q ss_pred cc-cccCceeecccchHhHHHHHHHHh
Q 007501 68 EP-VYRGSCRTNIGGYHITDYLKQLLS 93 (601)
Q Consensus 68 ~~-l~~a~~rl~iGG~~lt~yL~kLL~ 93 (601)
.. +.....-.++||.+++..|...|.
T Consensus 220 ~~~V~a~~gd~~lGG~d~D~~l~~~l~ 246 (675)
T 3d2f_A 220 QLKVLGTACDKHFGGRDFDLAITEHFA 246 (675)
T ss_dssp EEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred eEEEEEEcCCCCccHHHHHHHHHHHHH
Confidence 44 333334579999999999988875
No 31
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=89.26 E-value=0.16 Score=54.53 Aligned_cols=71 Identities=18% Similarity=0.250 Sum_probs=42.7
Q ss_pred cchhHHHHhhcCCCC--ChhhHHhhhcCcEEecCCCCCCChHHHHHHHHHhhCCCCCCeeEee-----C----------C
Q 007501 493 LDEMTGVSIRRLPTK--DEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVR-----A----------L 555 (601)
Q Consensus 493 L~e~I~~sI~~~~~~--~~d~r~~L~~NIvLtGG~S~~pGf~eRL~~EL~~l~p~~~~i~V~~-----~----------~ 555 (601)
|.+.|..+|..+ .. |......+...||||||+|++||+.+.+...+.. +++|.. | .
T Consensus 305 i~~~V~~~L~~~-~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~------~vri~~~~~~~p~~~~~~~~~~~ 377 (419)
T 4a2a_A 305 IMSKSKKFFREV-EAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKS------PVRTGCYANSDRPSIINADEVAN 377 (419)
T ss_dssp HHHHHHHHHHHH-TTCC--------TTCEEEESGGGGSTTHHHHHHHHHTS------CEEECCGGGSSSCCCBTCHHHHT
T ss_pred HHHHHHHHHHHc-CCCcccccccccCCEEEEECchhchhhHHHHHHHHHCC------CeEEEecCCCCchhccCcccccC
Confidence 445556666532 11 1111345678899999999999999999998853 244433 2 3
Q ss_pred CCcccceehhhhhhc
Q 007501 556 DPVLDAWRGASVYAT 570 (601)
Q Consensus 556 d~~~~aW~GgSilas 570 (601)
+|.|++=+|-.+++.
T Consensus 378 ~P~~~t~~Gl~~~~~ 392 (419)
T 4a2a_A 378 DPSFAAAFGNVFAVS 392 (419)
T ss_dssp CGGGHHHHHTTCC--
T ss_pred CchHHHHHHHHHHHh
Confidence 677777777776654
No 32
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=89.12 E-value=0.34 Score=50.96 Aligned_cols=90 Identities=12% Similarity=-0.053 Sum_probs=59.1
Q ss_pred eEEEecCcc---cchHHHHHHH---h--hhhhhhhhhhhhccccCCC---CCCcccceeecCCCceeEEee--eCCccc-
Q 007501 5 HFMFLECML---LSKINMSFLY---A--ITAFGVDAAFSYKYNQQYG---ICNKDGLAICPGFSTTHVIPF--VEGEPV- 70 (601)
Q Consensus 5 pVLlTE~~~---~~Rekm~Eil---~--al~~~~~sllSlya~g~~~---~~~ttGLVVD~G~~~T~VvPV--~eG~~l- 70 (601)
.+++|=|.. ..|+.|.+.. + .+.+...+..+.++.+... ....+.+|||+|.++|.|.=+ -+|..-
T Consensus 152 ~~vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v 231 (409)
T 4gni_A 152 SAVITIPTNFTEKQKAALIAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTI 231 (409)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETTEEEE
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCCeEEE
Confidence 478888876 7777777776 2 4455666666665555210 123578999999999988654 333211
Q ss_pred ccCceeecccchHhHHHHHHHHhc
Q 007501 71 YRGSCRTNIGGYHITDYLKQLLSL 94 (601)
Q Consensus 71 ~~a~~rl~iGG~~lt~yL~kLL~~ 94 (601)
.....-.++||.+++.-|...|..
T Consensus 232 ~~~~~~~~lGG~~~d~~i~~~l~~ 255 (409)
T 4gni_A 232 LATVHDYEYHGIALDKVLIDHFSK 255 (409)
T ss_dssp EEEEEESSSSHHHHHHHHHHHHHH
T ss_pred EEecCCCCcCHHHHHHHHHHHHHH
Confidence 222234799999999998887754
No 33
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=85.41 E-value=0.36 Score=53.51 Aligned_cols=63 Identities=21% Similarity=0.248 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhhhhcCCCCCCCCCCCCCCccCCCCccccCCCCC---eEEEeCcccccccccccCCCCCCCCCCC
Q 007501 421 NEAELARISARLQEVDPTFVPKQESGPTQSAAEIPRVRPLTKED---FQIVLGVERFRCPEILFRPNWVGIDQVG 492 (601)
Q Consensus 421 ~~~~L~~le~~L~~~dp~F~~~~~~~~~~~~~~~~~~y~lpdg~---~~I~Lg~ERf~~pEiLF~Psl~g~~~~G 492 (601)
+..-+++|++++|++.++|...... ...+..|++. +.+.++.|++.|||.||+|++++.....
T Consensus 308 d~~~v~~iKe~~c~v~~d~~~~~~~---------~~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~~~~~ 373 (593)
T 4fo0_A 308 DCLLLQHLKETFCHLDQDISGLQDH---------EFQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQK 373 (593)
T ss_dssp HHHHHHHHHHHHCBCCTTCCSCEEE---------EEEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCCCSSC
T ss_pred hHHHHHHHHHHhcccccchHHhhhh---------hhhcccCCCCceeeEEeccchhhcCchhhcChhhhcccccc
Confidence 4456888999999999998765311 1223345543 5688999999999999999998876543
No 34
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=85.11 E-value=1.1 Score=49.80 Aligned_cols=63 Identities=13% Similarity=0.008 Sum_probs=51.6
Q ss_pred CcccceeecCCCceeEEeeeCCcccccCceeecccchHhHHHHHHHHhccCCCCCCcccHHHHHHHHhhccccc
Q 007501 46 NKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSLKHPQHMTKLTWEKVEDLKMEHCYIA 119 (601)
Q Consensus 46 ~ttGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~iGG~~lt~yL~kLL~~k~~~~~~~~~~~~v~~IKe~~CyVa 119 (601)
..-.++||+|.++|.+.=+.+|..+. +..+++||.++|.-+..-|.. -+...++.||. |+..-
T Consensus 406 eLGvaiIDmGGGTTd~sVf~~G~lv~--a~~ip~gG~~VT~DIA~~Lgt--------~d~~~AErIK~-YG~A~ 468 (610)
T 2d0o_A 406 TRPLAILDLGAGSTDASIINPKGDII--ATHLAGAGDMVTMIIARELGL--------EDRYLAEEIKK-YPLAK 468 (610)
T ss_dssp CSSEEEEEECSSEEEEEEECTTCCEE--EEEEECSHHHHHHHHHHHHTC--------CCHHHHHHHHH-SCEEE
T ss_pred cCCeEEEEeCCCcceEEEEcCCcEEE--EEEeccchHHHHHHHHHHhCC--------CCHHHHHHhcc-cCcee
Confidence 34578999999999999999987654 455899999999999998852 24889999999 77654
No 35
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=85.09 E-value=1.1 Score=49.85 Aligned_cols=63 Identities=13% Similarity=0.007 Sum_probs=51.6
Q ss_pred CcccceeecCCCceeEEeeeCCcccccCceeecccchHhHHHHHHHHhccCCCCCCcccHHHHHHHHhhccccc
Q 007501 46 NKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSLKHPQHMTKLTWEKVEDLKMEHCYIA 119 (601)
Q Consensus 46 ~ttGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~iGG~~lt~yL~kLL~~k~~~~~~~~~~~~v~~IKe~~CyVa 119 (601)
..-.++||+|.|+|.+.=+.+|..+. +..+++||.++|.-+..-|.. -+...++.||. |+..-
T Consensus 408 elGvaiIDmGgGTTd~sVf~~g~lv~--a~~ip~gG~~VT~DIA~~Lg~--------~d~~~AErIK~-YG~A~ 470 (607)
T 1nbw_A 408 AAPLAILDLGAGSTDAAIVNAEGQIT--AVHLAGAGNMVSLLIKTELGL--------EDLSLAEAIKK-YPLAK 470 (607)
T ss_dssp CSSEEEEEECSSEEEEEEECSSSCEE--EEEEECCHHHHHHHHHHHHTC--------SCHHHHHHHHH-SCEEE
T ss_pred cCCeEEEEeCCCcceEEEEcCCcEEE--EEEeccchHHHHHHHHHHhCC--------CCHHHHHHhcc-cCcee
Confidence 34578999999999999999997654 455899999999999998852 24889999999 77654
No 36
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=83.88 E-value=0.23 Score=55.70 Aligned_cols=66 Identities=15% Similarity=0.165 Sum_probs=46.5
Q ss_pred CcchhHHHHhhcCCCCChhhHHhhhcCcEEecCCCCCCChHHHHHHHHHhhCCCCCCeeEeeCCCCcccceehhhhhhc
Q 007501 492 GLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYAT 570 (601)
Q Consensus 492 GL~e~I~~sI~~~~~~~~d~r~~L~~NIvLtGG~S~~pGf~eRL~~EL~~l~p~~~~i~V~~~~d~~~~aW~GgSilas 570 (601)
.+...|..++... .+...-...|+|+||+|.+|++.++|...+.. .+..+.+|..++=.||++.|.
T Consensus 315 ~i~~~v~~~L~~a-----~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~--------~~~~~~nPdeaVA~GAai~a~ 380 (605)
T 4b9q_A 315 RSIEPLKVALQDA-----GLSVSDIDDVILVGGQTRMPMVQKKVAEFFGK--------EPRKDVNPDEAVAIGAAVQGG 380 (605)
T ss_dssp HTTHHHHHHHHHT-----TCCGGGCSEEEEESGGGGSHHHHHHHHHHHTS--------CCCSSSCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-----CCCHHHCcEEEEeCCccCchHHHHHHHHHhcc--------CcCCCcChhHHHHHhHHHHHH
Confidence 4556666666532 12223357899999999999999999888731 233455788888889998875
No 37
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=81.46 E-value=1.2 Score=49.77 Aligned_cols=90 Identities=10% Similarity=-0.085 Sum_probs=59.1
Q ss_pred eEEEecCcc---cchHHHHHHH---h--hhhhhhhhhhhhccccCCC-CCCcccceeecCCCceeEEeeeCCc------c
Q 007501 5 HFMFLECML---LSKINMSFLY---A--ITAFGVDAAFSYKYNQQYG-ICNKDGLAICPGFSTTHVIPFVEGE------P 69 (601)
Q Consensus 5 pVLlTE~~~---~~Rekm~Eil---~--al~~~~~sllSlya~g~~~-~~~ttGLVVD~G~~~T~VvPV~eG~------~ 69 (601)
.++||=|.. ..|..|.+.. + .+.+.+.+..+.++.|... ....+-+|+|+|.|+|.|.-+--+. .
T Consensus 137 ~~VITVPa~f~~~qr~a~~~Aa~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~ 216 (605)
T 4b9q_A 137 EAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTF 216 (605)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEE
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceE
Confidence 468888876 7787777766 2 4456666666665555210 1134679999999999988554332 1
Q ss_pred -cccCceeecccchHhHHHHHHHHhc
Q 007501 70 -VYRGSCRTNIGGYHITDYLKQLLSL 94 (601)
Q Consensus 70 -l~~a~~rl~iGG~~lt~yL~kLL~~ 94 (601)
+.....-..+||.+++..|...|..
T Consensus 217 evla~~gd~~lGG~d~D~~l~~~l~~ 242 (605)
T 4b9q_A 217 EVLATNGDTHLGGEDFDSRLINYLVE 242 (605)
T ss_dssp EEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCcChHHHHHHHHHHHHH
Confidence 1222233588999999988877754
No 38
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=78.31 E-value=1.2 Score=46.53 Aligned_cols=25 Identities=36% Similarity=0.549 Sum_probs=23.3
Q ss_pred cccceeecCCCceeEEeeeCCcccc
Q 007501 47 KDGLAICPGFSTTHVIPFVEGEPVY 71 (601)
Q Consensus 47 ttGLVVD~G~~~T~VvPV~eG~~l~ 71 (601)
.+||+||+|..+|.|+||.+|.++.
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~ 151 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVA 151 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECC
T ss_pred CCEEEEEcCcchhhhhhhcCCeecc
Confidence 5799999999999999999998876
No 39
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=71.40 E-value=2.9 Score=43.49 Aligned_cols=42 Identities=21% Similarity=0.256 Sum_probs=33.1
Q ss_pred cccceeecCCCceeEEeeeC--Cccc--ccCceeecccchHhHHHH
Q 007501 47 KDGLAICPGFSTTHVIPFVE--GEPV--YRGSCRTNIGGYHITDYL 88 (601)
Q Consensus 47 ttGLVVD~G~~~T~VvPV~e--G~~l--~~a~~rl~iGG~~lt~yL 88 (601)
.+++|||+|.++|.++=+-+ +.+. ......+++|+-.+|+.+
T Consensus 146 ~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~SlplG~v~lt~~~ 191 (343)
T 3cer_A 146 APYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSMNIGSVRMTERH 191 (343)
T ss_dssp SSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEESCCHHHHHHHT
T ss_pred CCEEEEEeCCCceEEEEeecCccCcccccceeEEEehhHHHHHHHh
Confidence 56999999999999997766 4321 135678999999999865
No 40
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=68.46 E-value=3.6 Score=42.26 Aligned_cols=40 Identities=13% Similarity=-0.033 Sum_probs=34.1
Q ss_pred cccceeecCCCceeEEeeeCCcccccCceeecccchHhHHHH
Q 007501 47 KDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYL 88 (601)
Q Consensus 47 ttGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~iGG~~lt~yL 88 (601)
.+++|||+|.++|.++=+-+|.+. ....+++|+-.+++.+
T Consensus 138 ~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~~G~v~l~e~~ 177 (315)
T 1t6c_A 138 GEVCVVDQGGGSTEYVFGKGYKVR--EVISLPIGIVNLTETF 177 (315)
T ss_dssp SEEEEEEEETTEEEEEEEETTEEE--EEEEECCCHHHHHHHH
T ss_pred CCEEEEEeCCCcEEEEEEeCCcee--eEEEEeccHHHHHHHh
Confidence 579999999999999988888654 4667999999999875
No 41
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=68.18 E-value=2.2 Score=43.49 Aligned_cols=72 Identities=11% Similarity=0.012 Sum_probs=50.4
Q ss_pred CCcchhHHHHhhcCCCCChhhHHhhhcCcEEecC-CCCCCChHHHHHHHHHhhCCCCCCeeEeeCCCCcccceehhhhhh
Q 007501 491 VGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGG-CCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYA 569 (601)
Q Consensus 491 ~GL~e~I~~sI~~~~~~~~d~r~~L~~NIvLtGG-~S~~pGf~eRL~~EL~~l~p~~~~i~V~~~~d~~~~aW~GgSila 569 (601)
.||..+|.+.|..+ .+ .-.+..=..+|+++|| .+..|++.++|...+.. ...+++.|+++.|..=+||++++
T Consensus 214 asl~~sV~~~I~~l-a~-~~a~~~~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~-----~~~~~~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 214 AAVIGVVGEVVTTM-AI-TVAREFKTENIVYIGSSFHNNALLRKVVEDYTVL-----RGCKPYYVENGAFSGAIGALYLE 286 (287)
T ss_dssp HHHHHHHHHHHHHH-HH-HHHHHTTCCEEEEESGGGTTCHHHHHHHHHHHHH-----TTCEEEECTTGGGHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHH-HH-HHHHhCCCCeEEEeCCchhcCHHHHHHHHHHHhh-----CCceEEECCCccHHHHHHHHHhC
Confidence 46666766665311 00 0012233457999999 89999999999976554 24678889999999999998875
No 42
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=61.91 E-value=2.3 Score=43.25 Aligned_cols=47 Identities=9% Similarity=0.217 Sum_probs=33.0
Q ss_pred hcCcEEecCCCCCCChHHHHHHHHHhhCCCCCCeeEeeCCCCcccceehhhhhh
Q 007501 516 TSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYA 569 (601)
Q Consensus 516 ~~NIvLtGG~S~~pGf~eRL~~EL~~l~p~~~~i~V~~~~d~~~~aW~GgSila 569 (601)
...|||+||+|.+ +.+ .|...+|.. .-+|..+++|.++.=+|+.+++
T Consensus 273 ~~~vvl~GGga~l--l~~----~l~~~~~~~-~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 273 YTHVMVIGGGAEL--ICD----AVKKHTQIR-DERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CCEEEEESTTHHH--HHH----HHHHTSCCC-GGGEECCSCGGGHHHHHHHHHH
T ss_pred CCeEEEECChHHH--HHH----HHHHHhCCC-CCceeeCCCcHHHHHHHHHHhc
Confidence 4789999999987 444 444444421 1145667899999999998876
No 43
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=58.27 E-value=1.9 Score=44.43 Aligned_cols=47 Identities=15% Similarity=0.197 Sum_probs=33.8
Q ss_pred hhhcCcEEecCCCCCCChHHHHHHHHHhhCCCCCCeeEeeCCCCcccceehhhhhhc
Q 007501 514 RLTSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYAT 570 (601)
Q Consensus 514 ~L~~NIvLtGG~S~~pGf~eRL~~EL~~l~p~~~~i~V~~~~d~~~~aW~GgSilas 570 (601)
.++..|+||||++++ +.+.|..+ +| +.|..+++|.++.=+|.-.++.
T Consensus 277 ~~~~~IvltGGGA~l--~~~~l~~~----~~----~~v~v~~~P~~a~a~G~~~~~~ 323 (329)
T 4apw_A 277 DQLDSLIFIGGTTQK--LKEQISKT----YP----NNSIITNNSQWTTCEGLYKVAV 323 (329)
T ss_dssp TSCSEEEEESTTHHH--HHHHHHHH----ST----TCEECCSSGGGHHHHHHHHHHH
T ss_pred HHccEEEEECChHHH--HHHHHHHH----cC----CCCEecCCChhhHHHHHHHHHh
Confidence 346899999999998 44555554 33 2355678899998888877654
No 44
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=57.90 E-value=7.4 Score=39.84 Aligned_cols=40 Identities=23% Similarity=0.151 Sum_probs=33.5
Q ss_pred cccceeecCCCceeEEeeeCCcccccCceeecccchHhHHHH
Q 007501 47 KDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYL 88 (601)
Q Consensus 47 ttGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~iGG~~lt~yL 88 (601)
.++||||+|.|+|.++=+-+|.+. ....+++|.-.+++.+
T Consensus 131 ~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl~e~f 170 (315)
T 3mdq_A 131 HISLAMDIGGGSVEFIIGNKNEIL--WKQSFEIGGQRLIDRF 170 (315)
T ss_dssp CCEEEEEECSSCEEEEEECSSCEE--EEEEESCCHHHHHHHS
T ss_pred CCEEEEEeCCCceEEEEEECCeEe--eeEEEechhhHHHHHh
Confidence 579999999999999999988654 3667899998888654
No 45
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=55.47 E-value=7.5 Score=40.59 Aligned_cols=37 Identities=16% Similarity=0.061 Sum_probs=28.7
Q ss_pred cccceeecCCCceeEEeeeC--CcccccCceeecccchH
Q 007501 47 KDGLAICPGFSTTHVIPFVE--GEPVYRGSCRTNIGGYH 83 (601)
Q Consensus 47 ttGLVVD~G~~~T~VvPV~e--G~~l~~a~~rl~iGG~~ 83 (601)
.|++|||+|.++|.|+=+.. +.+....+..+++||..
T Consensus 140 ~t~~v~DiGGGStei~~~~~~~~~~~~~~~~sl~lG~~~ 178 (353)
T 3aap_A 140 KSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYGQN 178 (353)
T ss_dssp SCEEEEEECSSEEEEEEECCCCTTSCGGGEEEEEETTEE
T ss_pred ccEEEEEeCCCceEEEEecCCccccCCCceEEEEECCcc
Confidence 47999999999999997655 44444446788999955
No 46
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=55.39 E-value=6.9 Score=41.16 Aligned_cols=75 Identities=8% Similarity=-0.108 Sum_probs=52.7
Q ss_pred CCcchhHHHHhhcCCCCChhhHHhhhcCcEEecC-CCCCCChHHHHHHHHHhhCCCCCCeeEeeCCCCcccceehhhhhh
Q 007501 491 VGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGG-CCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYA 569 (601)
Q Consensus 491 ~GL~e~I~~sI~~~~~~~~d~r~~L~~NIvLtGG-~S~~pGf~eRL~~EL~~l~p~~~~i~V~~~~d~~~~aW~GgSila 569 (601)
.||..+|.+.|-.+ +-.-.++.-..+||++|| .+..|++.+.|...|.-.... .+++..++++.|..=+||++++
T Consensus 283 ~gll~sVa~~I~~l--A~l~A~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g--~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 283 RATLVTITNNIGSI--ARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKG--QLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp HHHHHHHHHHHHHH--HHHHHHHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTT--SCCEEEETTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--HHHHHHHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcC--CeeEEEcCCccHHHHHHHHHHh
Confidence 57888887776321 000113444568999999 999999999999988643322 3556667789999889998764
No 47
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=54.56 E-value=2.7 Score=41.97 Aligned_cols=48 Identities=27% Similarity=0.409 Sum_probs=38.6
Q ss_pred hcCcEEecCCCCCCChHHHHHHHHHhhCCCCCCeeEeeCCCCcccceehhhhhhcc
Q 007501 516 TSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYATK 571 (601)
Q Consensus 516 ~~NIvLtGG~S~~pGf~eRL~~EL~~l~p~~~~i~V~~~~d~~~~aW~GgSilasl 571 (601)
-..|+++||.+..|++.+.+...|.. .|+.|+.+.+..=+|++++|..
T Consensus 209 ~~~i~~~GG~a~n~~~~~~~~~~lg~--------~v~~p~~~~~~~AlGAAl~A~~ 256 (270)
T 1hux_A 209 VKDVVMTGGVAQNYGVRGALEEGLGV--------EIKTSPLAQYNGALGAALYAYK 256 (270)
T ss_dssp CSSEEEESGGGGCHHHHHHHHHHHCS--------CEECCGGGGGHHHHHHHHHHHH
T ss_pred CCeEEEeCccccCHHHHHHHHHHHCC--------CeEeCCCcchHhHHHHHHHHHH
Confidence 36799999999999999999888742 3555777787777899999854
No 48
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=47.54 E-value=15 Score=40.10 Aligned_cols=39 Identities=18% Similarity=0.106 Sum_probs=32.6
Q ss_pred ccceeecCCCceeEEeeeCCcccccCceeecccchHhHHHH
Q 007501 48 DGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYL 88 (601)
Q Consensus 48 tGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~iGG~~lt~yL 88 (601)
.+||||+|.|+|.++=+-+|.+. ....+++|.-.+|+.+
T Consensus 138 ~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrlte~f 176 (513)
T 1u6z_A 138 RKLVIDIGGGSTELVIGENFEPI--LVESRRMGCVSFAQLY 176 (513)
T ss_dssp CEEEEEECSSCEEEEEEETTEEE--EEEEESCCHHHHHHHH
T ss_pred CEEEEEECCCcEEEEEEeCCeee--EEEEEeccHHHHHHHH
Confidence 69999999999999977667654 4567899999998865
No 49
>2l2l_B Methyl-CPG-binding domain protein 2; DNA methylation, coiled-coil, NURD, MBD2, P66alpha, transfer; NMR {Homo sapiens}
Probab=47.43 E-value=27 Score=24.50 Aligned_cols=26 Identities=15% Similarity=0.240 Sum_probs=22.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHH
Q 007501 155 PPSEEEIARKAAIKERQGQRLREMAE 180 (601)
Q Consensus 155 ~~t~eel~~~~err~~~~~rl~e~~~ 180 (601)
..|++++.+|.+|=+...+||+|...
T Consensus 6 ~Vte~DIr~QE~rV~~aR~rL~eaL~ 31 (36)
T 2l2l_B 6 IVTDEDIRKQEERVQQVRKKLEEALM 31 (36)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37899999999999999999988753
No 50
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=41.34 E-value=20 Score=39.08 Aligned_cols=39 Identities=18% Similarity=0.225 Sum_probs=33.1
Q ss_pred cccceeecCCCceeEEeeeCCcccccCceeecccchHhHHH
Q 007501 47 KDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDY 87 (601)
Q Consensus 47 ttGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~iGG~~lt~y 87 (601)
.+|||||+|.|+|.++=+-+|.+. ....+++|.-.+++.
T Consensus 140 ~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl~e~ 178 (508)
T 3hi0_A 140 PDGIAGDLGGGSLELIDIKDKSCG--EGITLPLGGLRLSEQ 178 (508)
T ss_dssp CEEEEEEECSSCEEEEEEETTEEC--CCEEESCCHHHHHHH
T ss_pred CCeEEEEeCCCceEEEEeeCCeee--eEEEecceEEehhhc
Confidence 368999999999999999888754 466789999999874
No 51
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=40.71 E-value=15 Score=40.94 Aligned_cols=46 Identities=11% Similarity=0.148 Sum_probs=33.3
Q ss_pred cCcEEecCCCCCCChHHHHHHHHHhhCCCCCCeeEeeC-----CCCcccceehhhh
Q 007501 517 SSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRA-----LDPVLDAWRGASV 567 (601)
Q Consensus 517 ~NIvLtGG~S~~pGf~eRL~~EL~~l~p~~~~i~V~~~-----~d~~~~aW~GgSi 567 (601)
..||||||+|+++|+.+=....|..+ .|++-.| ..|.|++=.|-.+
T Consensus 552 ~~VVLTGGsSql~gI~elA~~iL~~~-----~VRiGrP~~~g~~gP~fAtAvGLll 602 (607)
T 1nbw_A 552 AFVVLVGGSSLDFEIPQLITEALSHY-----GVVAGQGNIRGTEGPRNAVATGLLL 602 (607)
T ss_dssp CEEEEESGGGGSSSHHHHHHHHHHTT-----TCEEEECCGGGTSCSCCHHHHHHHH
T ss_pred CCEEEeCchhhcccHHHHHHHHhCcC-----CeEEecCCccccCCchHHHHHHHHH
Confidence 45999999999999999999888752 2444333 3577776666544
No 52
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=37.80 E-value=16 Score=40.67 Aligned_cols=46 Identities=13% Similarity=0.141 Sum_probs=33.0
Q ss_pred cCcEEecCCCCCCChHHHHHHHHHhhCCCCCCeeEeeC-----CCCcccceehhhh
Q 007501 517 SSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRA-----LDPVLDAWRGASV 567 (601)
Q Consensus 517 ~NIvLtGG~S~~pGf~eRL~~EL~~l~p~~~~i~V~~~-----~d~~~~aW~GgSi 567 (601)
..||||||+|+++|+.+=....|.. +.|++-.| ..|.|++=.|-.+
T Consensus 550 ~~VVLTGGsSql~GI~ElA~~iL~~-----y~VRiGrP~~~gv~gP~fAtAvGLll 600 (610)
T 2d0o_A 550 PFVVLVGGSSLDFEVPQLVTDALAH-----YRLVAGRGNIRGSEGPRNAVATGLIL 600 (610)
T ss_dssp CEEEEESGGGGCSSHHHHHHHHTTT-----SSCEEEECCGGGTSTTSCHHHHHHHH
T ss_pred CCEEEeCchhhcccHHHHHHHHhCc-----CCeEEecCCccccCCCcHHHHHHHHH
Confidence 4599999999999999988887764 23444433 3577776666544
No 53
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=32.11 E-value=28 Score=34.70 Aligned_cols=52 Identities=15% Similarity=0.097 Sum_probs=39.7
Q ss_pred cCcEEecCCCCCCChHHHHHHHHHhhCCCCCCeeEeeCCCCcccceehhhhhhc
Q 007501 517 SSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYAT 570 (601)
Q Consensus 517 ~NIvLtGG~S~~pGf~eRL~~EL~~l~p~~~~i~V~~~~d~~~~aW~GgSilas 570 (601)
..|||.||.+..+.|-++|++.|....+. .+.|..+.-...++-+||+.++.
T Consensus 239 ~~IvlgGgi~~~~~~~~~l~~~l~~~~~~--~~~i~~s~lg~~a~~~GAa~l~~ 290 (297)
T 4htl_A 239 THIFIGGGITSRPTFIAELKHHMESFGLR--DTIIETATHKNQAGLLGAVYHFL 290 (297)
T ss_dssp SEEEEESGGGGSTTHHHHHHHHHTTTCCT--TCEEEECSCTTTHHHHHHHHHHH
T ss_pred CEEEEeCcccccHHHHHHHHHHHHHhccC--CCeEEECCcCChHHHHhHHHHHH
Confidence 34899999998899999999999876542 35666666566778889987763
No 54
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=31.46 E-value=8.8 Score=39.53 Aligned_cols=48 Identities=19% Similarity=0.216 Sum_probs=32.0
Q ss_pred hhcCcEEecCCCCCCChHHHHHHHHHhhCCCCCCeeEeeCCCCcccceehhhhhhc
Q 007501 515 LTSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYAT 570 (601)
Q Consensus 515 L~~NIvLtGG~S~~pGf~eRL~~EL~~l~p~~~~i~V~~~~d~~~~aW~GgSilas 570 (601)
....||||||+|.+ +. .-|...+|. ..+. ..+.+|.+++=+|...++.
T Consensus 296 ~i~~IvL~GGga~l--l~----~~l~~~~~~-~~i~-~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 296 RVTSLIPVGGGSNL--IG----DRFEEIAPG-TLVK-IKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp GEEEEEEESTTHHH--HG----GGGGGGSTT-CBCC-CCTTTTTTHHHHHHHHHHH
T ss_pred cccEEEEECCcHHH--HH----HHHHHHCcC-cEEe-ccCCCcHHHHHHHHHHHHh
Confidence 45889999999998 44 444444452 1111 2367899998888887654
No 55
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=31.22 E-value=16 Score=35.96 Aligned_cols=52 Identities=15% Similarity=0.130 Sum_probs=37.6
Q ss_pred cCcEEecCCCCCCChHHHHHHHHHhhCCCCCCeeEeeCCCCcccceehhhhhh
Q 007501 517 SSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYA 569 (601)
Q Consensus 517 ~NIvLtGG~S~~pGf~eRL~~EL~~l~p~~~~i~V~~~~d~~~~aW~GgSila 569 (601)
..|||.||.+..+-|.++|.+.+....+. ..+.|..+.-...++-+||+.++
T Consensus 235 ~~ivlgG~~~~~~~~~~~l~~~l~~~~~~-~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 235 QCVVVGGSVGLAEGYLALVETYLAQEPAA-FHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp SEEEEEHHHHTSTTHHHHHHHHHTTSCGG-GCCEEEECSCSSCHHHHHHHHHH
T ss_pred CEEEEeCcccccHHHHHHHHHHHHHhcCc-cCCEEEECCCCCchHHHHHHHHH
Confidence 35888888887788999999998876322 24566655555566778998875
No 56
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=27.98 E-value=3.8 Score=42.70 Aligned_cols=45 Identities=18% Similarity=0.131 Sum_probs=33.5
Q ss_pred hhhcCcEEecCCCCCCC--hHHHHHHHHHhhCCCCCCeeEeeCCCCcccceehhhhhhc
Q 007501 514 RLTSSILMTGGCCLFPG--MSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYAT 570 (601)
Q Consensus 514 ~L~~NIvLtGG~S~~pG--f~eRL~~EL~~l~p~~~~i~V~~~~d~~~~aW~GgSilas 570 (601)
..+..|+|+||++.++| +.+.|..++ |. . ++|.++.=.|..+++.
T Consensus 289 ~~~~~Ivl~GGGa~l~~~~l~~~i~~~~----~~------~--~~p~~anA~G~~~~~~ 335 (355)
T 3js6_A 289 NSIDRIIVTGGGANIHFDSLSHYYSDVF----EK------A--DDSQFSNVRGYEKLGE 335 (355)
T ss_dssp TSCSEEEEESTTHHHHHHHHHHHSSSCE----EC------C--SSGGGHHHHHHHHHHH
T ss_pred hhccEEEEECcchhcchhhHHHHHHHHC----CC------C--CCcHHHHHHHHHHHHH
Confidence 44688999999999888 666555433 32 1 7899999999888874
No 57
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=27.73 E-value=14 Score=36.47 Aligned_cols=54 Identities=11% Similarity=0.004 Sum_probs=36.1
Q ss_pred cCcEEecCCCCCCChHHHHHHHHHhhCCCC----CCeeEeeCCCCcccceehhhhhhc
Q 007501 517 SSILMTGGCCLFPGMSERLEAGIRMIRPCG----APIKVVRALDPVLDAWRGASVYAT 570 (601)
Q Consensus 517 ~NIvLtGG~S~~pGf~eRL~~EL~~l~p~~----~~i~V~~~~d~~~~aW~GgSilas 570 (601)
..|||.||.+..+-|.++|.+.+....+.. ..+.|..+.-...++-+||+.++-
T Consensus 229 ~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~ 286 (292)
T 2gup_A 229 GVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWL 286 (292)
T ss_dssp SEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHH
T ss_pred CEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHH
Confidence 358888888766778888888887654321 235565554445567789888763
No 58
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=27.47 E-value=34 Score=34.65 Aligned_cols=53 Identities=17% Similarity=0.176 Sum_probs=38.8
Q ss_pred cCcEEecCCCCCCChHHHHHHHHHhhCCC-CCCeeEeeCCCCcccceehhhhhh
Q 007501 517 SSILMTGGCCLFPGMSERLEAGIRMIRPC-GAPIKVVRALDPVLDAWRGASVYA 569 (601)
Q Consensus 517 ~NIvLtGG~S~~pGf~eRL~~EL~~l~p~-~~~i~V~~~~d~~~~aW~GgSila 569 (601)
..|||.||.+..+-|-++|...|...... ...+.|..+.-...++-+||+.++
T Consensus 271 ~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 271 HVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp SEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 35888898888888889999988877543 235677666655566778988775
No 59
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=26.41 E-value=55 Score=35.26 Aligned_cols=52 Identities=19% Similarity=0.204 Sum_probs=41.1
Q ss_pred cCcEEecCCCCCCChHHHHHHHHHhhCCC------CCCeeEeeCCCCcccceehhhhhhcc
Q 007501 517 SSILMTGGCCLFPGMSERLEAGIRMIRPC------GAPIKVVRALDPVLDAWRGASVYATK 571 (601)
Q Consensus 517 ~NIvLtGG~S~~pGf~eRL~~EL~~l~p~------~~~i~V~~~~d~~~~aW~GgSilasl 571 (601)
..|.+.||....|+|.++++.-|+.+++. ..+|.+..+.| .+=+||+++|.+
T Consensus 385 ~~V~vdGsv~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~d---gsg~GAAl~aa~ 442 (457)
T 2yhx_A 385 GHIAAXGSXRSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAID---GXGAASXVIXSI 442 (457)
T ss_dssp EEEEEESTTTTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECCC---TTTHHHHHHHHH
T ss_pred EEEEEECCcccCchHHHHHHHHHHHhhCcccccccCcceEEEECCC---chhhhHHHHHHH
Confidence 35888888878999999999999999754 44677776654 467899998864
No 60
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=24.54 E-value=29 Score=34.68 Aligned_cols=54 Identities=20% Similarity=0.102 Sum_probs=37.5
Q ss_pred cCcEEecCCC-CC-CChHHHHHHHHHhhCCCCCCeeEeeCCCCcccceehhhhhhc
Q 007501 517 SSILMTGGCC-LF-PGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYAT 570 (601)
Q Consensus 517 ~NIvLtGG~S-~~-pGf~eRL~~EL~~l~p~~~~i~V~~~~d~~~~aW~GgSilas 570 (601)
..|||.||.+ .. +-|-++|++.|....+......|..+.-...++-+||+.++-
T Consensus 239 ~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 239 GVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp SEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHH
T ss_pred CEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHH
Confidence 3478888877 55 458999999998876544334466555555677789988763
No 61
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=23.09 E-value=53 Score=32.99 Aligned_cols=62 Identities=19% Similarity=0.272 Sum_probs=40.4
Q ss_pred cCcEEecCCCCCCC-hHHHHHHHHHhhCC--C-CCCeeEeeCCCCcccceehhhhhhccCCCCCcc
Q 007501 517 SSILMTGGCCLFPG-MSERLEAGIRMIRP--C-GAPIKVVRALDPVLDAWRGASVYATKLQFPQQT 578 (601)
Q Consensus 517 ~NIvLtGG~S~~pG-f~eRL~~EL~~l~p--~-~~~i~V~~~~d~~~~aW~GgSilasl~~f~~~w 578 (601)
.-|||.||.+..+. |.++|...++..+. . ...+.|..+.-...+.-+||+.++--..|..-|
T Consensus 241 ~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~~~~~~p~ 306 (310)
T 3htv_A 241 DAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQRFLPQFC 306 (310)
T ss_dssp SEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHHHHCC---
T ss_pred CEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHHHhhcccc
Confidence 34788888887655 46788888876652 1 235677776666677889999888654455444
No 62
>1k1f_A Breakpoint cluster region protein; oligomerization, coiled coil, BCR-ABL kinase, transferase; 2.20A {Homo sapiens} SCOP: a.147.1.1
Probab=22.33 E-value=1.8e+02 Score=23.04 Aligned_cols=38 Identities=24% Similarity=0.247 Sum_probs=31.4
Q ss_pred eEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 007501 143 WQLPWVPPPTEEPPSEEEIARKAAIKERQGQRLREMAE 180 (601)
Q Consensus 143 ~QlP~~~~~~~~~~t~eel~~~~err~~~~~rl~e~~~ 180 (601)
-|||...|+.-.-.+-++++..-+|=+.+-+||.+--.
T Consensus 13 aqfp~~epp~m~l~~vgdiEqeLe~Ck~sIrrLE~evn 50 (72)
T 1k1f_A 13 AQFPDSEPPRMELRSVGDIEQELERAKASIRRLEQEVN 50 (72)
T ss_dssp HHCTTSCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCcHhHHhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 37888888877788999999999999999999954433
No 63
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=21.88 E-value=36 Score=35.39 Aligned_cols=51 Identities=16% Similarity=0.119 Sum_probs=36.8
Q ss_pred cCcEEecCCCCCCC-hHHHHHHHHHhhCCCCCCeeEeeCCCCcccceehhhhhhcc
Q 007501 517 SSILMTGGCCLFPG-MSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYATK 571 (601)
Q Consensus 517 ~NIvLtGG~S~~pG-f~eRL~~EL~~l~p~~~~i~V~~~~d~~~~aW~GgSilasl 571 (601)
.-|||+||.+..+- |.+++...+..+. ++.|+.+.....+.-+||+.++..
T Consensus 297 ~~IvlgGgi~~~~~~l~~~i~~~l~~~~----~~~i~~~~~~~~a~~~GAa~l~~~ 348 (381)
T 1saz_A 297 DFIVLTGGLAHEKEFLVPWITKRVSFIA----PVLVFPGSNEEKALALSALRVLRG 348 (381)
T ss_dssp SEEEEEEGGGGCTTTHHHHHHHHHTTTS----CEEEEEBCCHHHHHHHHHHHHHTT
T ss_pred CEEEEeCcCccChHHHHHHHHHHHHhhc----CeEEEecCcchhHHHHHHHHHHcC
Confidence 45999999887655 8899999988765 356665544444667788887753
No 64
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=21.72 E-value=38 Score=35.01 Aligned_cols=53 Identities=13% Similarity=0.017 Sum_probs=36.3
Q ss_pred cCcEEecCCCCC-CChHHHHHHHHHhhCCCCCCeeEeeCCCCcccceehhhhhh
Q 007501 517 SSILMTGGCCLF-PGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYA 569 (601)
Q Consensus 517 ~NIvLtGG~S~~-pGf~eRL~~EL~~l~p~~~~i~V~~~~d~~~~aW~GgSila 569 (601)
..|||.||.+.. +-|.+++...+....+....+.|..+.-...++-+||+.++
T Consensus 316 ~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~ 369 (380)
T 2hoe_A 316 SKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHA 369 (380)
T ss_dssp CEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHH
T ss_pred CEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHH
Confidence 358888888754 66788888888876543344666655544556778988776
No 65
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=21.43 E-value=1.6e+03 Score=30.22 Aligned_cols=69 Identities=16% Similarity=0.139 Sum_probs=19.1
Q ss_pred ChhhHHhhhcCcEEecCCCCCCChHHHHHHHHHhhCCCCCCeeEe-eCCCCcccceehhhhhhccCCCCCccccHHHHhh
Q 007501 508 DEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVV-RALDPVLDAWRGASVYATKLQFPQQTFSRMDYYE 586 (601)
Q Consensus 508 ~~d~r~~L~~NIvLtGG~S~~pGf~eRL~~EL~~l~p~~~~i~V~-~~~d~~~~aW~GgSilasl~~f~~~wITk~EYeE 586 (601)
|+-+-+.|-.+++-.||...+. +.+ +++ .+. ++.++-+. .-++|.|.+=+ .+. -++-++.||++=-++
T Consensus 2242 DP~L~pvL~k~~~k~gg~~~I~-lGd---k~i-dy~-~~FrlyltTkl~np~y~Pev----~~k-vtlINFtvT~~GLed 2310 (3245)
T 3vkg_A 2242 DPVLNPVLNKEIRKKGGRILIR-LGD---QDV-DFS-PSFMIFLFTRDPTAHFTPDL----CSR-VTFVNFTVTPSSLQS 2310 (3245)
T ss_dssp --------------------------------------CCCEEEEECCTTCCCCHHH----HHT-SEEEECCCCHHHHHH
T ss_pred chhHHHHHHHHHHhcCceEEEE-ECC---eeE-ecC-CCceEEEEecCCCCCCCHHH----Hhh-eEEEEEEecHHHHHH
Confidence 4445566666777777654331 111 111 111 22333333 23577776633 222 355666788775554
Q ss_pred h
Q 007501 587 K 587 (601)
Q Consensus 587 ~ 587 (601)
.
T Consensus 2311 Q 2311 (3245)
T 3vkg_A 2311 Q 2311 (3245)
T ss_dssp H
T ss_pred H
Confidence 3
No 66
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=20.29 E-value=26 Score=35.00 Aligned_cols=54 Identities=19% Similarity=0.054 Sum_probs=36.8
Q ss_pred cCcEEecCCCC-CCChHHHHHHHHHhhCCCC--CCeeEeeCCCCcccceehhhhhhc
Q 007501 517 SSILMTGGCCL-FPGMSERLEAGIRMIRPCG--APIKVVRALDPVLDAWRGASVYAT 570 (601)
Q Consensus 517 ~NIvLtGG~S~-~pGf~eRL~~EL~~l~p~~--~~i~V~~~~d~~~~aW~GgSilas 570 (601)
..|||.||.+. .+-|.++|...|....+.. ..+.|..+.-...++-+||+.++-
T Consensus 264 ~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 320 (326)
T 2qm1_A 264 DSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLAL 320 (326)
T ss_dssp SEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGG
T ss_pred CEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHH
Confidence 35888888775 5678888988888765421 135666555455667789988763
Done!