Query 007502
Match_columns 601
No_of_seqs 386 out of 3232
Neff 7.8
Searched_HMMs 46136
Date Thu Mar 28 11:28:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007502.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007502hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02872 triacylglycerol lipas 100.0 1.1E-27 2.3E-32 256.2 24.8 326 81-600 45-392 (395)
2 PLN02679 hydrolase, alpha/beta 99.9 2.1E-25 4.5E-30 237.6 25.0 213 354-598 136-358 (360)
3 PLN02385 hydrolase; alpha/beta 99.9 4.3E-25 9.3E-30 234.2 23.4 203 355-599 138-347 (349)
4 TIGR01836 PHA_synth_III_C poly 99.9 3E-24 6.5E-29 227.8 27.6 227 355-597 113-350 (350)
5 PLN02824 hydrolase, alpha/beta 99.9 2.1E-24 4.5E-29 223.0 24.5 213 353-597 82-294 (294)
6 KOG2624 Triglyceride lipase-ch 99.9 4.5E-24 9.7E-29 225.5 23.8 327 80-598 48-399 (403)
7 PLN02298 hydrolase, alpha/beta 99.9 4.2E-24 9.1E-29 224.6 23.6 206 355-599 110-319 (330)
8 KOG1455 Lysophospholipase [Lip 99.9 3.3E-24 7.2E-29 213.2 20.0 207 356-597 106-312 (313)
9 PHA02857 monoglyceride lipase; 99.9 2.4E-23 5.3E-28 212.8 27.1 197 356-599 76-275 (276)
10 TIGR02240 PHA_depoly_arom poly 99.9 1.2E-23 2.7E-28 215.3 21.6 197 354-599 72-268 (276)
11 COG2267 PldB Lysophospholipase 99.9 3.4E-23 7.4E-28 214.1 23.7 206 356-600 86-297 (298)
12 PRK00870 haloalkane dehalogena 99.9 3.3E-23 7.1E-28 215.1 22.8 198 354-597 96-301 (302)
13 PRK10749 lysophospholipase L2; 99.9 6.2E-23 1.3E-27 216.0 22.5 211 354-598 108-330 (330)
14 PLN02652 hydrolase; alpha/beta 99.9 2.4E-22 5.1E-27 215.7 25.1 199 355-598 186-388 (395)
15 PLN02965 Probable pheophorbida 99.9 6.3E-23 1.4E-27 207.7 19.0 200 354-598 52-254 (255)
16 PRK03592 haloalkane dehalogena 99.9 1.2E-22 2.6E-27 210.0 20.9 215 354-599 74-291 (295)
17 PRK10673 acyl-CoA esterase; Pr 99.9 6.7E-22 1.5E-26 199.0 22.8 189 354-597 62-255 (255)
18 PLN02578 hydrolase 99.9 1.3E-21 2.8E-26 208.0 25.2 215 354-595 133-353 (354)
19 TIGR03343 biphenyl_bphD 2-hydr 99.9 2E-21 4.3E-26 198.8 25.5 194 362-596 89-282 (282)
20 TIGR01838 PHA_synth_I poly(R)- 99.9 3.8E-21 8.1E-26 211.4 27.6 207 356-574 240-458 (532)
21 PLN03087 BODYGUARD 1 domain co 99.9 3.5E-21 7.6E-26 209.8 26.1 66 523-597 414-479 (481)
22 PRK06489 hypothetical protein; 99.9 4.8E-21 1E-25 204.1 23.9 75 518-600 283-360 (360)
23 PRK13604 luxD acyl transferase 99.9 4.9E-21 1.1E-25 195.6 22.7 71 82-158 11-82 (307)
24 TIGR02427 protocat_pcaD 3-oxoa 99.9 2.7E-21 5.9E-26 191.2 20.3 192 354-595 60-251 (251)
25 PRK07868 acyl-CoA synthetase; 99.9 8.8E-21 1.9E-25 226.4 26.7 231 354-599 119-363 (994)
26 TIGR03611 RutD pyrimidine util 99.9 9.1E-21 2E-25 189.2 22.1 196 354-596 61-257 (257)
27 PRK10349 carboxylesterase BioH 99.9 7.8E-21 1.7E-25 192.1 21.1 69 518-596 187-255 (256)
28 PRK11126 2-succinyl-6-hydroxy- 99.9 1.2E-20 2.5E-25 188.6 20.9 193 356-596 49-241 (242)
29 TIGR03056 bchO_mg_che_rel puta 99.9 3.5E-20 7.5E-25 188.3 24.3 65 521-595 214-278 (278)
30 TIGR01607 PST-A Plasmodium sub 99.9 2.4E-20 5.2E-25 196.5 22.3 200 355-596 100-332 (332)
31 TIGR01738 bioH putative pimelo 99.9 1.7E-20 3.6E-25 185.1 19.9 67 518-594 179-245 (245)
32 COG1647 Esterase/lipase [Gener 99.9 2.6E-20 5.7E-25 177.1 19.9 181 354-596 63-243 (243)
33 PLN03084 alpha/beta hydrolase 99.9 6E-20 1.3E-24 196.1 24.9 202 353-596 177-383 (383)
34 TIGR03695 menH_SHCHC 2-succiny 99.9 3.1E-20 6.8E-25 183.1 20.6 65 520-595 187-251 (251)
35 KOG4178 Soluble epoxide hydrol 99.9 4.8E-20 1.1E-24 186.3 21.6 217 353-598 93-321 (322)
36 PRK07581 hypothetical protein; 99.9 4.8E-20 1E-24 194.6 22.8 221 362-597 107-336 (339)
37 TIGR01839 PHA_synth_II poly(R) 99.9 7.7E-20 1.7E-24 199.0 24.7 201 353-563 264-476 (560)
38 PF12697 Abhydrolase_6: Alpha/ 99.8 8.2E-21 1.8E-25 184.4 13.6 179 354-588 47-227 (228)
39 PRK08775 homoserine O-acetyltr 99.8 5.3E-20 1.1E-24 194.8 20.7 67 522-598 272-340 (343)
40 TIGR01250 pro_imino_pep_2 prol 99.8 1.9E-19 4.1E-24 182.3 23.4 67 518-595 222-288 (288)
41 PRK03204 haloalkane dehalogena 99.8 9.6E-20 2.1E-24 187.9 21.3 58 527-594 227-285 (286)
42 PLN02511 hydrolase 99.8 1.3E-19 2.9E-24 194.7 20.4 198 358-597 154-365 (388)
43 PRK10985 putative hydrolase; P 99.8 2.8E-19 6E-24 187.8 21.5 199 362-598 115-321 (324)
44 PLN02211 methyl indole-3-aceta 99.8 3.2E-19 6.8E-24 182.9 20.3 63 523-596 206-269 (273)
45 TIGR01392 homoserO_Ac_trn homo 99.8 2.9E-19 6.3E-24 189.7 19.6 70 518-595 279-351 (351)
46 PRK14875 acetoin dehydrogenase 99.8 1.6E-18 3.4E-23 184.7 23.3 192 356-597 180-371 (371)
47 TIGR01249 pro_imino_pep_1 prol 99.8 2.3E-18 4.9E-23 179.4 23.8 64 520-596 240-304 (306)
48 KOG4409 Predicted hydrolase/ac 99.8 2.2E-18 4.8E-23 174.8 22.3 215 363-597 145-364 (365)
49 KOG1454 Predicted hydrolase/ac 99.8 3.9E-19 8.4E-24 185.9 16.7 67 522-598 258-325 (326)
50 PRK05077 frsA fermentation/res 99.8 4.5E-18 9.8E-23 184.0 24.8 162 365-597 250-412 (414)
51 PLN02894 hydrolase, alpha/beta 99.8 1.2E-17 2.5E-22 180.4 27.7 71 518-598 316-386 (402)
52 PLN02980 2-oxoglutarate decarb 99.8 3.4E-18 7.4E-23 211.4 25.4 207 354-600 1426-1642(1655)
53 PRK00175 metX homoserine O-ace 99.8 2.7E-18 5.9E-23 184.2 21.4 74 519-599 301-376 (379)
54 TIGR03100 hydr1_PEP hydrolase, 99.8 7.2E-18 1.6E-22 172.9 22.3 56 357-418 79-135 (274)
55 PRK05855 short chain dehydroge 99.8 3.6E-18 7.7E-23 192.7 17.7 65 523-598 229-293 (582)
56 PRK10566 esterase; Provisional 99.8 3.3E-17 7.2E-22 164.8 22.2 56 96-156 14-69 (249)
57 COG3243 PhaC Poly(3-hydroxyalk 99.7 7.8E-17 1.7E-21 167.0 19.6 226 354-596 157-398 (445)
58 TIGR01849 PHB_depoly_PhaZ poly 99.7 2.1E-16 4.5E-21 167.8 22.0 227 354-597 150-406 (406)
59 COG0429 Predicted hydrolase of 99.7 6.4E-17 1.4E-21 163.4 14.4 202 361-598 131-341 (345)
60 KOG2382 Predicted alpha/beta h 99.7 2.9E-16 6.3E-21 159.1 18.2 198 356-598 102-314 (315)
61 PF12695 Abhydrolase_5: Alpha/ 99.7 1E-15 2.2E-20 140.3 15.1 40 111-155 1-40 (145)
62 COG4757 Predicted alpha/beta h 99.7 1.4E-15 3.1E-20 145.4 14.5 200 353-594 80-280 (281)
63 COG1506 DAP2 Dipeptidyl aminop 99.7 8.6E-15 1.9E-19 166.4 22.6 162 362-599 455-618 (620)
64 PF00561 Abhydrolase_1: alpha/ 99.6 6.9E-16 1.5E-20 151.6 9.9 55 358-416 24-78 (230)
65 KOG1552 Predicted alpha/beta h 99.6 5.8E-15 1.3E-19 144.8 16.1 142 362-599 113-254 (258)
66 KOG1838 Alpha/beta hydrolase [ 99.6 2.2E-14 4.8E-19 150.1 21.0 198 361-597 181-388 (409)
67 PRK06765 homoserine O-acetyltr 99.6 4E-14 8.6E-19 151.7 22.6 224 354-596 141-387 (389)
68 KOG4391 Predicted alpha/beta h 99.6 1E-14 2.2E-19 137.9 14.1 154 362-599 131-284 (300)
69 PRK11071 esterase YqiA; Provis 99.6 2.3E-14 5.1E-19 138.8 15.9 55 526-595 135-189 (190)
70 PF00326 Peptidase_S9: Prolyl 99.6 8.5E-14 1.8E-18 137.0 18.9 163 361-599 45-211 (213)
71 TIGR03101 hydr2_PEP hydrolase, 99.6 2.3E-14 4.9E-19 145.6 15.1 58 356-419 79-136 (266)
72 PF05448 AXE1: Acetyl xylan es 99.6 1.3E-13 2.8E-18 143.8 20.4 167 358-597 154-320 (320)
73 PRK11460 putative hydrolase; P 99.6 1.9E-13 4.1E-18 136.8 19.4 52 362-415 85-136 (232)
74 TIGR01840 esterase_phb esteras 99.5 2.5E-13 5.3E-18 133.9 17.0 54 362-417 77-130 (212)
75 TIGR02821 fghA_ester_D S-formy 99.5 1.6E-12 3.6E-17 133.3 22.8 78 77-156 8-89 (275)
76 PLN02442 S-formylglutathione h 99.5 1.6E-12 3.5E-17 134.0 21.4 58 358-419 123-180 (283)
77 TIGR00976 /NonD putative hydro 99.5 9.6E-13 2.1E-17 148.0 20.9 55 362-419 80-134 (550)
78 KOG2564 Predicted acetyltransf 99.5 1.8E-13 4E-18 134.4 11.9 73 79-159 47-120 (343)
79 PLN00021 chlorophyllase 99.5 1.1E-12 2.5E-17 136.5 18.7 53 94-153 39-91 (313)
80 COG3458 Acetyl esterase (deace 99.5 5.7E-13 1.2E-17 130.5 14.6 165 357-598 154-318 (321)
81 COG0596 MhpC Predicted hydrola 99.5 1.4E-12 3E-17 127.8 15.7 67 520-595 214-280 (282)
82 COG2021 MET2 Homoserine acetyl 99.4 6.8E-11 1.5E-15 121.9 22.6 220 361-596 129-367 (368)
83 PF06500 DUF1100: Alpha/beta h 99.4 1.1E-11 2.5E-16 130.8 16.7 159 366-597 247-409 (411)
84 KOG2984 Predicted hydrolase [G 99.4 4.7E-12 1E-16 118.9 12.1 178 362-598 99-277 (277)
85 PF01738 DLH: Dienelactone hyd 99.4 6.1E-12 1.3E-16 124.4 12.5 187 299-597 23-217 (218)
86 PF02273 Acyl_transf_2: Acyl t 99.3 6.7E-11 1.5E-15 114.6 18.9 70 83-158 5-75 (294)
87 KOG4667 Predicted esterase [Li 99.3 1.2E-11 2.5E-16 117.5 12.4 48 108-158 32-79 (269)
88 COG2945 Predicted hydrolase of 99.3 2.8E-11 6E-16 113.5 14.4 119 362-595 86-205 (210)
89 COG0412 Dienelactone hydrolase 99.3 2.3E-11 5E-16 121.8 14.8 190 300-599 37-235 (236)
90 PRK10162 acetyl esterase; Prov 99.3 3.1E-10 6.8E-15 119.0 22.7 58 362-419 133-197 (318)
91 PRK10115 protease 2; Provision 99.3 2.3E-10 5.1E-15 131.3 20.8 56 362-419 506-561 (686)
92 PF02230 Abhydrolase_2: Phosph 99.2 4.1E-10 8.9E-15 111.3 15.8 125 362-597 88-215 (216)
93 PF02129 Peptidase_S15: X-Pro 99.2 3.1E-10 6.6E-15 116.3 14.0 56 362-420 84-139 (272)
94 TIGR03230 lipo_lipase lipoprot 99.1 2.5E-10 5.4E-15 123.0 12.6 56 362-419 101-156 (442)
95 COG0400 Predicted esterase [Ge 99.1 1.4E-09 3E-14 106.1 15.8 123 362-597 81-205 (207)
96 PRK05371 x-prolyl-dipeptidyl a 99.1 5E-09 1.1E-13 121.3 23.1 72 518-597 446-519 (767)
97 cd00707 Pancreat_lipase_like P 99.1 1.7E-10 3.7E-15 118.4 9.3 56 362-419 94-149 (275)
98 COG3208 GrsT Predicted thioest 99.1 9.1E-09 2E-13 100.8 18.6 64 524-597 173-236 (244)
99 PF12146 Hydrolase_4: Putative 99.1 2.8E-10 6.1E-15 93.8 6.3 59 91-157 1-59 (79)
100 PF08538 DUF1749: Protein of u 99.0 2.3E-09 5.1E-14 109.1 12.1 60 362-421 88-152 (303)
101 PF12715 Abhydrolase_7: Abhydr 99.0 5E-10 1.1E-14 116.6 7.2 54 360-416 206-259 (390)
102 TIGR03502 lipase_Pla1_cef extr 99.0 1.4E-09 3E-14 124.1 11.3 45 109-158 449-493 (792)
103 PF10503 Esterase_phd: Esteras 98.9 5.2E-08 1.1E-12 96.1 16.0 53 362-416 79-131 (220)
104 KOG3043 Predicted hydrolase re 98.9 9.7E-09 2.1E-13 98.8 10.4 172 306-598 56-241 (242)
105 KOG2100 Dipeptidyl aminopeptid 98.9 5.4E-08 1.2E-12 112.5 18.6 156 361-597 589-747 (755)
106 PF00975 Thioesterase: Thioest 98.9 6.3E-08 1.4E-12 96.0 16.7 38 111-153 2-39 (229)
107 PF07859 Abhydrolase_3: alpha/ 98.9 4.5E-08 9.8E-13 95.8 15.2 61 358-419 47-112 (211)
108 PF03096 Ndr: Ndr family; Int 98.9 6.2E-07 1.3E-11 90.7 22.7 196 355-596 81-278 (283)
109 PF06342 DUF1057: Alpha/beta h 98.8 4.1E-07 8.9E-12 91.1 20.3 46 109-159 35-80 (297)
110 PF06028 DUF915: Alpha/beta hy 98.8 6.5E-08 1.4E-12 97.6 13.7 59 358-419 84-145 (255)
111 PF03403 PAF-AH_p_II: Platelet 98.7 3.2E-07 6.9E-12 98.2 16.3 40 108-152 99-138 (379)
112 PF10230 DUF2305: Uncharacteri 98.7 9.1E-07 2E-11 90.4 18.9 65 354-419 59-124 (266)
113 PF05728 UPF0227: Uncharacteri 98.7 7.1E-07 1.5E-11 86.0 16.9 34 381-419 60-93 (187)
114 PF09752 DUF2048: Uncharacteri 98.7 1.7E-06 3.8E-11 89.6 20.7 51 361-416 159-209 (348)
115 PF12740 Chlorophyllase2: Chlo 98.7 1.3E-06 2.9E-11 87.5 18.0 38 380-417 91-131 (259)
116 PF06821 Ser_hydrolase: Serine 98.7 3.7E-07 8E-12 86.9 13.4 35 380-416 55-90 (171)
117 COG0657 Aes Esterase/lipase [L 98.7 1.5E-06 3.3E-11 90.7 19.3 60 362-421 131-195 (312)
118 PF11339 DUF3141: Protein of u 98.7 1.1E-05 2.4E-10 86.6 25.6 205 363-579 124-353 (581)
119 KOG2931 Differentiation-relate 98.6 1.6E-05 3.5E-10 79.7 24.9 196 355-596 104-305 (326)
120 KOG1515 Arylacetamide deacetyl 98.6 3.1E-06 6.8E-11 88.6 20.3 60 362-421 144-211 (336)
121 PF08840 BAAT_C: BAAT / Acyl-C 98.6 1.5E-07 3.3E-12 92.9 9.3 55 362-419 4-58 (213)
122 COG4188 Predicted dienelactone 98.6 4.5E-07 9.8E-12 94.2 12.1 58 90-152 48-109 (365)
123 PF07819 PGAP1: PGAP1-like pro 98.6 3.5E-07 7.6E-12 91.0 10.8 55 364-418 66-124 (225)
124 PF06057 VirJ: Bacterial virul 98.6 6.7E-07 1.5E-11 85.1 12.1 56 358-416 49-106 (192)
125 KOG2281 Dipeptidyl aminopeptid 98.6 3.8E-06 8.2E-11 91.4 18.7 53 362-416 708-761 (867)
126 COG2936 Predicted acyl esteras 98.5 4.4E-06 9.5E-11 91.8 16.4 55 362-419 107-161 (563)
127 PF01674 Lipase_2: Lipase (cla 98.4 6.8E-07 1.5E-11 88.1 7.6 36 362-400 60-95 (219)
128 PF07224 Chlorophyllase: Chlor 98.4 5.3E-06 1.2E-10 81.9 12.5 40 380-419 120-159 (307)
129 KOG2551 Phospholipase/carboxyh 98.3 2.1E-05 4.6E-10 76.0 15.7 62 523-597 159-220 (230)
130 PF03959 FSH1: Serine hydrolas 98.2 2.8E-06 6.1E-11 83.8 8.2 40 523-563 157-196 (212)
131 PRK10252 entF enterobactin syn 98.2 1.1E-05 2.4E-10 100.0 15.0 56 355-416 1114-1170(1296)
132 PF03583 LIP: Secretory lipase 98.2 4.9E-05 1.1E-09 78.7 17.3 88 315-418 21-114 (290)
133 PLN02733 phosphatidylcholine-s 98.2 4E-06 8.7E-11 91.1 9.1 60 358-420 143-204 (440)
134 KOG4627 Kynurenine formamidase 98.2 2.3E-05 5E-10 74.6 12.7 134 362-579 119-252 (270)
135 COG3571 Predicted hydrolase of 98.2 4.9E-05 1.1E-09 69.7 14.3 37 380-418 89-125 (213)
136 COG4099 Predicted peptidase [G 98.2 3.4E-05 7.4E-10 77.3 14.0 54 362-417 250-304 (387)
137 COG3545 Predicted esterase of 98.1 2.7E-05 5.8E-10 72.8 11.7 64 525-596 115-178 (181)
138 KOG3847 Phospholipase A2 (plat 98.1 2.6E-05 5.5E-10 78.7 11.8 40 110-154 119-158 (399)
139 KOG2565 Predicted hydrolases o 98.1 5.5E-05 1.2E-09 78.0 13.6 53 362-418 213-265 (469)
140 PF12048 DUF3530: Protein of u 98.0 0.00049 1.1E-08 71.9 19.2 69 77-151 59-127 (310)
141 COG4814 Uncharacterized protei 98.0 0.00014 3.1E-09 71.5 13.7 59 357-418 116-177 (288)
142 COG3509 LpqC Poly(3-hydroxybut 97.9 0.0001 2.2E-09 74.3 11.5 54 362-417 126-179 (312)
143 KOG3101 Esterase D [General fu 97.9 9.2E-05 2E-09 70.8 10.1 73 337-421 108-180 (283)
144 PF00151 Lipase: Lipase; Inte 97.8 7.6E-05 1.6E-09 78.5 8.9 59 362-420 132-190 (331)
145 COG3319 Thioesterase domains o 97.7 0.00014 3E-09 73.5 8.6 40 379-418 64-104 (257)
146 PF00756 Esterase: Putative es 97.7 8E-05 1.7E-09 74.9 7.0 52 366-419 101-152 (251)
147 PF05677 DUF818: Chlamydia CHL 97.7 0.0083 1.8E-07 62.1 20.9 77 81-159 111-189 (365)
148 PF04083 Abhydro_lipase: Parti 97.6 0.00013 2.7E-09 57.3 5.2 46 81-127 13-61 (63)
149 PRK10439 enterobactin/ferric e 97.6 0.0013 2.8E-08 71.5 14.8 51 362-417 271-323 (411)
150 PF05990 DUF900: Alpha/beta hy 97.6 0.00027 5.8E-09 70.8 8.8 56 362-419 77-139 (233)
151 KOG4840 Predicted hydrolases o 97.4 0.0035 7.6E-08 60.7 13.1 61 356-419 86-146 (299)
152 KOG3975 Uncharacterized conser 97.4 0.023 5.1E-07 56.1 18.9 54 363-417 94-147 (301)
153 KOG1553 Predicted alpha/beta h 97.4 0.0013 2.8E-08 67.3 10.4 53 362-417 293-345 (517)
154 COG1075 LipA Predicted acetylt 97.3 0.00075 1.6E-08 71.4 7.9 58 362-421 111-168 (336)
155 cd00312 Esterase_lipase Estera 97.2 0.0024 5.2E-08 71.1 11.7 58 361-418 154-214 (493)
156 PF05057 DUF676: Putative seri 97.1 0.0011 2.3E-08 65.7 7.2 21 380-400 78-98 (217)
157 KOG1551 Uncharacterized conser 97.1 0.025 5.4E-07 56.3 16.1 62 530-601 309-370 (371)
158 PRK04940 hypothetical protein; 97.1 0.016 3.5E-07 55.2 14.2 35 380-419 60-94 (180)
159 PF02450 LCAT: Lecithin:choles 97.1 0.0018 3.9E-08 69.9 8.8 58 358-419 101-162 (389)
160 PF05705 DUF829: Eukaryotic pr 97.0 0.0088 1.9E-07 60.0 13.0 63 525-594 176-240 (240)
161 PLN02633 palmitoyl protein thi 97.0 0.0044 9.6E-08 63.6 10.5 35 381-416 95-130 (314)
162 COG1073 Hydrolases of the alph 97.0 0.0099 2.1E-07 60.2 13.3 74 520-598 224-298 (299)
163 PTZ00472 serine carboxypeptida 97.0 0.008 1.7E-07 66.3 13.3 62 358-420 149-219 (462)
164 PF10142 PhoPQ_related: PhoPQ- 96.9 0.0095 2.1E-07 63.2 12.4 67 519-597 254-320 (367)
165 COG1770 PtrB Protease II [Amin 96.9 0.032 6.9E-07 62.3 16.5 59 362-422 509-567 (682)
166 COG4782 Uncharacterized protei 96.9 0.0041 8.9E-08 64.7 8.7 61 358-420 171-237 (377)
167 PF05577 Peptidase_S28: Serine 96.8 0.0043 9.4E-08 68.0 8.8 56 361-418 93-149 (434)
168 COG2272 PnbA Carboxylesterase 96.8 0.016 3.5E-07 62.8 12.7 58 361-419 158-219 (491)
169 KOG3253 Predicted alpha/beta h 96.8 0.0061 1.3E-07 66.8 9.3 68 523-596 300-373 (784)
170 KOG2112 Lysophospholipase [Lip 96.7 0.011 2.4E-07 57.0 9.6 52 362-416 76-127 (206)
171 PF04301 DUF452: Protein of un 96.7 0.04 8.6E-07 54.1 13.7 35 381-419 58-92 (213)
172 PLN02606 palmitoyl-protein thi 96.6 0.01 2.2E-07 60.9 9.1 35 381-416 96-131 (306)
173 COG1505 Serine proteases of th 96.5 0.026 5.7E-07 62.2 12.4 56 361-419 481-537 (648)
174 COG2819 Predicted hydrolase of 96.5 0.0097 2.1E-07 59.8 8.5 56 358-418 118-173 (264)
175 smart00824 PKS_TE Thioesterase 96.5 0.01 2.2E-07 56.8 8.5 37 380-416 64-101 (212)
176 PF00135 COesterase: Carboxyle 96.4 0.011 2.4E-07 66.1 9.1 57 359-416 184-244 (535)
177 PLN02517 phosphatidylcholine-s 96.4 0.0063 1.4E-07 67.4 6.6 58 357-417 193-263 (642)
178 KOG2541 Palmitoyl protein thio 96.3 0.06 1.3E-06 53.9 12.1 35 381-416 93-127 (296)
179 PF02089 Palm_thioest: Palmito 96.2 0.032 7E-07 56.8 10.3 35 381-416 81-115 (279)
180 KOG2369 Lecithin:cholesterol a 96.1 0.009 1.9E-07 64.2 5.7 59 357-418 162-226 (473)
181 cd00741 Lipase Lipase. Lipase 96.0 0.015 3.3E-07 53.9 6.1 54 362-417 12-67 (153)
182 PF08386 Abhydrolase_4: TAP-li 95.9 0.026 5.6E-07 48.9 7.1 61 526-596 33-93 (103)
183 KOG3724 Negative regulator of 95.9 0.018 3.9E-07 65.1 7.1 56 362-417 157-220 (973)
184 PF10340 DUF2424: Protein of u 95.6 0.06 1.3E-06 57.1 9.6 57 362-420 179-238 (374)
185 COG0627 Predicted esterase [Ge 95.5 0.033 7.2E-07 58.2 7.2 65 354-421 127-191 (316)
186 PF11187 DUF2974: Protein of u 95.5 0.025 5.5E-07 56.2 5.8 38 380-417 84-123 (224)
187 PF11144 DUF2920: Protein of u 95.4 0.05 1.1E-06 58.0 8.1 58 358-417 160-219 (403)
188 COG4553 DepA Poly-beta-hydroxy 95.2 0.48 1E-05 48.1 13.8 229 353-599 150-409 (415)
189 KOG2183 Prolylcarboxypeptidase 94.9 0.07 1.5E-06 56.5 7.2 58 361-420 148-206 (492)
190 KOG2182 Hydrolytic enzymes of 94.8 0.26 5.6E-06 53.6 11.4 56 361-418 152-208 (514)
191 PF07082 DUF1350: Protein of u 94.8 0.13 2.9E-06 51.3 8.5 51 363-415 71-123 (250)
192 PF01764 Lipase_3: Lipase (cla 94.6 0.066 1.4E-06 48.4 5.6 38 362-401 48-85 (140)
193 PF11288 DUF3089: Protein of u 93.8 0.12 2.5E-06 50.6 5.7 43 358-401 74-116 (207)
194 cd00519 Lipase_3 Lipase (class 93.8 0.1 2.3E-06 51.8 5.6 37 362-400 112-148 (229)
195 COG3946 VirJ Type IV secretory 93.5 0.092 2E-06 55.5 4.7 42 358-402 307-348 (456)
196 KOG3967 Uncharacterized conser 92.9 0.57 1.2E-05 45.5 8.6 40 380-419 190-229 (297)
197 KOG2237 Predicted serine prote 92.8 0.12 2.6E-06 57.6 4.4 57 362-420 531-587 (712)
198 PF06259 Abhydrolase_8: Alpha/ 92.6 0.27 6E-06 46.9 6.1 53 362-417 92-144 (177)
199 COG0412 Dienelactone hydrolase 92.2 0.29 6.3E-06 49.1 6.2 60 86-152 6-65 (236)
200 PF01083 Cutinase: Cutinase; 92.0 0.32 7E-06 46.5 6.0 55 362-418 65-123 (179)
201 PLN02454 triacylglycerol lipas 91.6 0.28 6.1E-06 52.7 5.5 39 362-400 210-248 (414)
202 PF06850 PHB_depo_C: PHB de-po 91.0 0.24 5.1E-06 47.6 3.7 100 491-597 95-202 (202)
203 PLN02162 triacylglycerol lipas 90.8 0.53 1.1E-05 51.2 6.6 53 362-416 262-320 (475)
204 PF05277 DUF726: Protein of un 90.7 0.96 2.1E-05 47.8 8.3 42 378-419 218-262 (345)
205 PLN02571 triacylglycerol lipas 90.5 0.4 8.7E-06 51.6 5.3 39 362-400 208-246 (413)
206 PLN00413 triacylglycerol lipas 90.3 0.62 1.3E-05 50.8 6.6 53 362-416 268-326 (479)
207 PLN02408 phospholipase A1 90.3 0.4 8.8E-06 50.9 5.1 39 362-400 182-220 (365)
208 COG3150 Predicted esterase [Ge 90.2 1.1 2.4E-05 42.0 7.2 34 381-419 60-93 (191)
209 KOG2521 Uncharacterized conser 88.9 5 0.00011 42.5 11.8 68 527-599 225-292 (350)
210 PLN02324 triacylglycerol lipas 88.6 0.67 1.4E-05 49.9 5.3 39 362-400 197-235 (415)
211 PF01738 DLH: Dienelactone hyd 88.5 0.4 8.7E-06 47.0 3.4 51 96-153 3-53 (218)
212 PLN02802 triacylglycerol lipas 88.3 0.64 1.4E-05 51.1 5.0 39 362-400 312-350 (509)
213 PLN02761 lipase class 3 family 87.0 0.95 2.1E-05 49.9 5.3 39 362-400 272-314 (527)
214 PLN02934 triacylglycerol lipas 86.8 0.9 1.9E-05 50.0 5.0 37 362-400 305-341 (515)
215 PLN02310 triacylglycerol lipas 86.7 0.88 1.9E-05 48.9 4.8 21 380-400 209-229 (405)
216 PLN02753 triacylglycerol lipas 86.6 0.93 2E-05 50.0 5.0 39 362-400 291-332 (531)
217 PLN02719 triacylglycerol lipas 84.9 1.2 2.7E-05 49.0 4.9 39 362-400 277-318 (518)
218 PLN02847 triacylglycerol lipas 84.7 1.4 3E-05 49.4 5.2 37 362-400 235-271 (633)
219 PF00450 Peptidase_S10: Serine 83.9 9.1 0.0002 41.2 11.3 62 358-420 114-184 (415)
220 PLN03037 lipase class 3 family 83.2 1.6 3.4E-05 48.3 4.8 21 380-400 318-338 (525)
221 KOG4540 Putative lipase essent 82.8 1.9 4E-05 43.8 4.7 43 357-402 256-298 (425)
222 COG5153 CVT17 Putative lipase 82.8 1.9 4E-05 43.8 4.7 43 357-402 256-298 (425)
223 COG4287 PqaA PhoPQ-activated p 81.5 5.9 0.00013 41.7 8.0 62 524-597 326-387 (507)
224 PLN03016 sinapoylglucose-malat 77.3 24 0.00053 38.7 11.7 62 527-597 347-431 (433)
225 KOG1516 Carboxylesterase and r 75.8 34 0.00074 38.5 12.9 56 361-416 173-231 (545)
226 PLN02209 serine carboxypeptida 75.5 32 0.00068 37.9 12.0 66 527-596 351-434 (437)
227 COG2382 Fes Enterochelin ester 74.9 2.2 4.7E-05 43.9 2.5 37 381-419 178-214 (299)
228 TIGR03712 acc_sec_asp2 accesso 73.9 57 0.0012 36.0 13.0 58 355-417 333-390 (511)
229 KOG4569 Predicted lipase [Lipi 72.1 5 0.00011 42.5 4.6 36 363-400 156-191 (336)
230 PF06441 EHN: Epoxide hydrolas 67.7 7.7 0.00017 34.1 4.1 35 88-125 74-108 (112)
231 KOG4372 Predicted alpha/beta h 63.4 1.9 4E-05 46.1 -0.7 17 381-397 151-167 (405)
232 PF12146 Hydrolase_4: Putative 62.9 13 0.00029 30.3 4.4 54 303-369 26-79 (79)
233 PF08237 PE-PPE: PE-PPE domain 62.7 18 0.00039 36.0 6.1 61 355-416 24-88 (225)
234 KOG2029 Uncharacterized conser 62.2 11 0.00023 42.3 4.7 53 363-416 509-571 (697)
235 PF07519 Tannase: Tannase and 56.4 12 0.00027 41.5 4.1 57 362-420 96-153 (474)
236 PTZ00472 serine carboxypeptida 49.2 40 0.00087 37.3 6.7 63 527-597 364-459 (462)
237 KOG2385 Uncharacterized conser 48.7 32 0.00069 38.1 5.5 54 367-421 435-491 (633)
238 PF07167 PhaC_N: Poly-beta-hyd 42.7 23 0.00049 33.6 2.9 44 93-137 129-172 (172)
239 COG0529 CysC Adenylylsulfate k 39.2 1.7E+02 0.0036 28.2 8.0 37 109-148 22-58 (197)
240 COG1448 TyrB Aspartate/tyrosin 36.6 63 0.0014 34.5 5.3 68 89-157 139-220 (396)
241 KOG1282 Serine carboxypeptidas 35.8 1.3E+02 0.0029 33.1 8.0 41 81-122 45-86 (454)
242 COG2240 PdxK Pyridoxal/pyridox 33.7 56 0.0012 33.5 4.3 36 115-159 11-52 (281)
243 PHA02857 monoglyceride lipase; 33.5 47 0.001 33.2 3.9 26 306-334 41-66 (276)
244 PF03853 YjeF_N: YjeF-related 31.0 33 0.00072 32.3 2.1 34 108-146 24-57 (169)
245 PF00450 Peptidase_S10: Serine 30.6 86 0.0019 33.6 5.6 60 528-595 331-414 (415)
246 COG1166 SpeA Arginine decarbox 28.3 1.7E+02 0.0037 32.9 7.0 106 274-388 241-357 (652)
247 PLN02213 sinapoylglucose-malat 27.9 2.1E+02 0.0047 29.8 7.8 62 527-597 233-317 (319)
248 PLN02213 sinapoylglucose-malat 27.8 1.7E+02 0.0037 30.6 7.0 58 362-419 32-98 (319)
249 KOG1209 1-Acyl dihydroxyaceton 25.3 79 0.0017 31.3 3.5 35 109-149 6-40 (289)
250 TIGR03707 PPK2_P_aer polyphosp 25.3 4.1E+02 0.009 26.5 8.8 39 109-150 30-68 (230)
251 KOG4178 Soluble epoxide hydrol 25.0 70 0.0015 33.5 3.3 26 306-334 60-85 (322)
252 PF07519 Tannase: Tannase and 24.9 97 0.0021 34.5 4.7 65 527-597 353-427 (474)
253 COG0552 FtsY Signal recognitio 24.9 8.5E+02 0.018 25.8 11.4 51 362-412 241-291 (340)
254 COG3605 PtsP Signal transducti 24.3 5E+02 0.011 29.7 9.7 35 380-419 328-362 (756)
255 PRK13255 thiopurine S-methyltr 23.5 72 0.0016 31.4 3.1 28 110-149 40-67 (218)
256 COG4947 Uncharacterized protei 23.3 61 0.0013 30.8 2.3 36 381-418 102-137 (227)
257 PF00326 Peptidase_S9: Prolyl 23.1 52 0.0011 31.7 2.0 45 108-154 143-187 (213)
258 PLN03050 pyridoxine (pyridoxam 22.6 92 0.002 31.4 3.6 33 111-148 62-94 (246)
259 PLN03016 sinapoylglucose-malat 22.2 2.7E+02 0.0058 30.6 7.4 58 362-419 146-212 (433)
260 COG1506 DAP2 Dipeptidyl aminop 21.7 57 0.0012 37.6 2.2 60 95-156 537-596 (620)
261 KOG4388 Hormone-sensitive lipa 20.3 2.4E+02 0.0052 32.1 6.3 41 376-416 465-507 (880)
262 cd07212 Pat_PNPLA9 Patatin-lik 20.2 1.3E+02 0.0029 31.4 4.4 37 366-402 16-54 (312)
263 TIGR02685 pter_reduc_Leis pter 20.1 1.1E+02 0.0024 30.5 3.7 34 110-150 1-34 (267)
264 KOG3043 Predicted hydrolase re 20.0 1.7E+02 0.0037 29.2 4.7 37 110-150 40-76 (242)
No 1
>PLN02872 triacylglycerol lipase
Probab=99.96 E-value=1.1e-27 Score=256.18 Aligned_cols=326 Identities=20% Similarity=0.268 Sum_probs=221.3
Q ss_pred ceEEEEeeCCCeEEEEEEeCCCCC--CCCCCCcEEEecCCCCCCcccccC-CCCcHHHHHHhCCCeEEEeCCCCCCCCCC
Q 007502 81 ELHYVSVANCDWRLALWRYNPPPQ--APTRNHPLLLLSGVGTNAIGYDLS-PGSSFARYMAGQGFDTWILEVRGAGLSVR 157 (601)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~~p~~~--~~~~~~p~~llhG~~~~~~~~~~~-~~~~~a~~l~~~G~~v~~~d~rg~g~S~~ 157 (601)
|.|+++++ ||+.|.++|+.+... .+..++||+|+||++.++..|.+. +..+++..|+++||+||++|+||+|.|.+
T Consensus 45 e~h~v~T~-DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~g 123 (395)
T PLN02872 45 TEHTIQTK-DGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYG 123 (395)
T ss_pred eEEEEECC-CCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccC
Confidence 88999987 999999999954321 122467999999999999999765 56789999999999999999999997765
Q ss_pred CCChhhhhhhccCchhhHHHhhhcchhhHhhhhhccCCcCCCCCCCCCCCCCCCCCcCCccccchhhhhhhhccchhhhh
Q 007502 158 GSNLKEAQQSAHGVSEQMEAVANSTTSEAFAKSATNGVYSADPQLTDFPGALSDSKISPVKKEDDLTRLATVWDESKLVT 237 (601)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (601)
.......
T Consensus 124 h~~~~~~------------------------------------------------------------------------- 130 (395)
T PLN02872 124 HVTLSEK------------------------------------------------------------------------- 130 (395)
T ss_pred CCCCCcc-------------------------------------------------------------------------
Confidence 3211000
Q ss_pred hhhhhHHhhhhhhhcccccchhhhhhhhhHHHhhhhhhhhhhhhhhHHHhhhhhhhhhhhchhHHHHHHHHHHHHHHHHH
Q 007502 238 KLTETFMSLSERLSGFLSENQSKIMSAKLFDQISKLLEDSQLSEGFNEIRGKLSSLLERRQSSAIAIQIRDLSQNLVNMI 317 (601)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~la 317 (601)
T Consensus 131 -------------------------------------------------------------------------------- 130 (395)
T PLN02872 131 -------------------------------------------------------------------------------- 130 (395)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HcCCeeccccccchhhhhhhcHHHHHhcccceeeeCCCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHH
Q 007502 318 EEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAM 397 (601)
Q Consensus 318 ~~Gy~viaPdl~~~~~~l~~~~~~~~~~~~~l~~~d~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~ 397 (601)
....|+|++++++.+|+.++|+++....+ +++++|||||||++++.+
T Consensus 131 ------------------------------~~~fw~~s~~e~a~~Dl~a~id~i~~~~~---~~v~~VGhS~Gg~~~~~~ 177 (395)
T PLN02872 131 ------------------------------DKEFWDWSWQELALYDLAEMIHYVYSITN---SKIFIVGHSQGTIMSLAA 177 (395)
T ss_pred ------------------------------chhccCCcHHHHHHHHHHHHHHHHHhccC---CceEEEEECHHHHHHHHH
Confidence 00025788999988999999999986543 489999999999999965
Q ss_pred HHhCC-CccccceeEEEccCCCCCCchhHHH-hhccc--cChhhhcCCCcc-chHHHHHHhcCCCCCchh-HHHHHhhhc
Q 007502 398 LSRCG-RESRLAAIVTLASSLDYTSSKSTLK-LLLPL--ADPAQALNVPVV-PLGALLTAAYPLSSSPPY-VFSWLNNLI 471 (601)
Q Consensus 398 Aa~~P-~~~~V~~lVllap~~~~~~~~~~l~-~l~~l--~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~-~~~~l~~~~ 471 (601)
+ .+| ..++|+.+++++|.........++. .+... ......++.... +...++..+......... -...+....
T Consensus 178 ~-~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~ 256 (395)
T PLN02872 178 L-TQPNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSIT 256 (395)
T ss_pred h-hChHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHh
Confidence 5 545 2347999999999876544433332 11110 001111221111 111111111110000000 001111122
Q ss_pred cccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCcc-----cccc------ccCCC--CCCEEEEEeCCC
Q 007502 472 SAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKF-----FYKD------HIHKC--NIPILAIAGDQD 538 (601)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----d~~~------~L~~I--~vPVLII~Ge~D 538 (601)
+.....+...+..++.......+.+.+.+|.+.+..+.|..++-.. .|.. .+++| ++|+++++|++|
T Consensus 257 g~~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D 336 (395)
T PLN02872 257 GTNCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTD 336 (395)
T ss_pred CCCcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCC
Confidence 2222244555555665666777889999999999999998775321 1211 56778 589999999999
Q ss_pred CCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhhcCC
Q 007502 539 LICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDSV 600 (601)
Q Consensus 539 ~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~~~~ 600 (601)
.+++++.++++.+.+++. .+++.+ ++++|.+|+++.++++++++.|++||+++.+.
T Consensus 337 ~lv~~~dv~~l~~~Lp~~-~~l~~l-----~~~gH~dfi~~~eape~V~~~Il~fL~~~~~~ 392 (395)
T PLN02872 337 GLADVTDVEHTLAELPSK-PELLYL-----ENYGHIDFLLSTSAKEDVYNHMIQFFRSLGKS 392 (395)
T ss_pred CCCCHHHHHHHHHHCCCc-cEEEEc-----CCCCCHHHHhCcchHHHHHHHHHHHHHHhhhc
Confidence 999999999999999873 356665 88999999999999999999999999987643
No 2
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=2.1e-25 Score=237.55 Aligned_cols=213 Identities=18% Similarity=0.201 Sum_probs=114.8
Q ss_pred CCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCch--hH--HHhh
Q 007502 354 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSK--ST--LKLL 429 (601)
Q Consensus 354 ~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~--~~--l~~l 429 (601)
|++++++ +|+.++++.+. . ++++|+||||||.+++.++.++. +++|+++|++++........ .. ....
T Consensus 136 ~~~~~~a-~~l~~~l~~l~----~--~~~~lvGhS~Gg~ia~~~a~~~~-P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~ 207 (360)
T PLN02679 136 YTMETWA-ELILDFLEEVV----Q--KPTVLIGNSVGSLACVIAASEST-RDLVRGLVLLNCAGGMNNKAVVDDWRIKLL 207 (360)
T ss_pred ccHHHHH-HHHHHHHHHhc----C--CCeEEEEECHHHHHHHHHHHhcC-hhhcCEEEEECCccccccccccchHHHhhh
Confidence 5566777 88888888763 2 38999999999999999887531 48999999999864322110 00 0000
Q ss_pred ccccChhhh-cCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcC
Q 007502 430 LPLADPAQA-LNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREG 508 (601)
Q Consensus 430 ~~l~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 508 (601)
.+....... ...+ ......+........+..++..........+.+....+. ...... .....+...+...
T Consensus 208 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~ 279 (360)
T PLN02679 208 LPLLWLIDFLLKQR-----GIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIR-GPADDE--GALDAFVSIVTGP 279 (360)
T ss_pred cchHHHHHHHhhch-----hhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHH-hhccCC--ChHHHHHHHHhcC
Confidence 000000000 0000 000000000000111122222211111122333332221 111111 1111111111100
Q ss_pred CcccCCCccccccccCCCCCCEEEEEeCCCCCCCHHH-----HHHHHHHCCCCceEEEEecCCCCCCCCcccccccccch
Q 007502 509 GLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEA-----VEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAV 583 (601)
Q Consensus 509 ~~~~~~~~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~-----~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~p 583 (601)
...+....+.+|++|+|+|+|++|.++|++. .+++.+.+++. +++++ ++++|+.|.| .|
T Consensus 280 ------~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~--~l~~i--~~aGH~~~~E------~P 343 (360)
T PLN02679 280 ------PGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNV--TLYVL--EGVGHCPHDD------RP 343 (360)
T ss_pred ------CCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCce--EEEEc--CCCCCCcccc------CH
Confidence 0112345678999999999999999998863 34566677876 88888 7778888876 89
Q ss_pred hhHHHHHHHHHhhhc
Q 007502 584 EQVYPCIVQFLGRYD 598 (601)
Q Consensus 584 e~v~~~I~eFL~~~~ 598 (601)
+++++.|.+||++..
T Consensus 344 e~~~~~I~~FL~~~~ 358 (360)
T PLN02679 344 DLVHEKLLPWLAQLP 358 (360)
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999998754
No 3
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.94 E-value=4.3e-25 Score=234.15 Aligned_cols=203 Identities=14% Similarity=0.179 Sum_probs=114.4
Q ss_pred CchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccC
Q 007502 355 DFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLAD 434 (601)
Q Consensus 355 s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~ 434 (601)
++++++ +|+.++++.+..+...+..+++|+||||||++++.++.++| ++|+++|+++|................+
T Consensus 138 ~~~~~~-~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p--~~v~glVLi~p~~~~~~~~~~~~~~~~~-- 212 (349)
T PLN02385 138 SFDDLV-DDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQP--NAWDGAILVAPMCKIADDVVPPPLVLQI-- 212 (349)
T ss_pred CHHHHH-HHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCc--chhhheeEecccccccccccCchHHHHH--
Confidence 456776 99999999887643333347999999999999999999966 8999999999875432211000000000
Q ss_pred hhhhcCCCccchHHHHHHhcCCC---CCchhHHHHHhhhccccccCCHH--HHHHHHHhhcC-CCcHHHHHHHHHHHHcC
Q 007502 435 PAQALNVPVVPLGALLTAAYPLS---SSPPYVFSWLNNLISAEDMMHPE--LLKKLVLNNFC-TIPAKLILQLTTAFREG 508 (601)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~l~~~~~~~~~~ 508 (601)
........+.. ....+. .. .+ .+.. ........... .........+.....
T Consensus 213 ------------~~~~~~~~p~~~~~~~~~~~-~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-- 269 (349)
T PLN02385 213 ------------LILLANLLPKAKLVPQKDLA-EL---AF-----RDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQ-- 269 (349)
T ss_pred ------------HHHHHHHCCCceecCCCccc-cc---cc-----cCHHHHHHhhcCcceeCCCcchHHHHHHHHHHH--
Confidence 00000000000 000000 00 00 0000 00000000000 001111112211111
Q ss_pred CcccCCCccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCccccccccc-chhhHH
Q 007502 509 GLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRM-AVEQVY 587 (601)
Q Consensus 509 ~~~~~~~~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~-~pe~v~ 587 (601)
+....+.+|++|+|+|+|++|.++|++.++.+++.+++.+++++++ ++++|..+.+ ..+ ..+.++
T Consensus 270 ---------~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i--~~~gH~l~~e---~p~~~~~~v~ 335 (349)
T PLN02385 270 ---------EIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLY--EDAYHSILEG---EPDEMIFQVL 335 (349)
T ss_pred ---------HHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEe--CCCeeecccC---CChhhHHHHH
Confidence 2234678899999999999999999999999999986545588888 5566655543 111 123489
Q ss_pred HHHHHHHhhhcC
Q 007502 588 PCIVQFLGRYDS 599 (601)
Q Consensus 588 ~~I~eFL~~~~~ 599 (601)
+.|++||+++..
T Consensus 336 ~~i~~wL~~~~~ 347 (349)
T PLN02385 336 DDIISWLDSHST 347 (349)
T ss_pred HHHHHHHHHhcc
Confidence 999999998754
No 4
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.93 E-value=3e-24 Score=227.84 Aligned_cols=227 Identities=19% Similarity=0.297 Sum_probs=135.8
Q ss_pred CchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccC
Q 007502 355 DFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLAD 434 (601)
Q Consensus 355 s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~ 434 (601)
++++|+.+|+.+++++++.+.+.. +++++||||||++++.+++.+| ++|+++|+++++.++.........+.....
T Consensus 113 ~~~d~~~~~~~~~v~~l~~~~~~~--~i~lvGhS~GG~i~~~~~~~~~--~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~ 188 (350)
T TIGR01836 113 TLDDYINGYIDKCVDYICRTSKLD--QISLLGICQGGTFSLCYAALYP--DKIKNLVTMVTPVDFETPGNMLSNWARHVD 188 (350)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCC--cccEEEECHHHHHHHHHHHhCc--hheeeEEEeccccccCCCCchhhhhccccC
Confidence 355676567999999999887654 8999999999999999999965 889999999999876543322211111111
Q ss_pred hhhhc-CCCccchHHHHHHhcCCCCC-chhHHHHHhhhccccccCCHHHHHHHH-----HhhcCCCcHHHHHHHHHHHH-
Q 007502 435 PAQAL-NVPVVPLGALLTAAYPLSSS-PPYVFSWLNNLISAEDMMHPELLKKLV-----LNNFCTIPAKLILQLTTAFR- 506 (601)
Q Consensus 435 ~~~~~-g~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~- 506 (601)
..... .....+ +.+....+.+... ......+..... ...+++.+..+. .......+...+.++...+.
T Consensus 189 ~~~~~~~~~~~p-~~~~~~~f~~l~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~ 264 (350)
T TIGR01836 189 IDLAVDTMGNIP-GELLNLTFLMLKPFSLGYQKYVNLVD---ILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQ 264 (350)
T ss_pred HHHHHHhcCCCC-HHHHHHHHHhcCcchhhhHHHHHHHH---hcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHh
Confidence 00000 000111 1111111111110 001111111000 011233332221 11122344555556554432
Q ss_pred cCCcccCCCccc---cccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccch
Q 007502 507 EGGLRDRGGKFF---YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAV 583 (601)
Q Consensus 507 ~~~~~~~~~~~d---~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~p 583 (601)
...+.. +... ....++++++|+|+++|++|.++|++.++.+.+.+++..++++++ ..+|.+++.+.+.+
T Consensus 265 ~n~l~~--g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~------~~gH~~~~~~~~~~ 336 (350)
T TIGR01836 265 QNGLIN--GEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSF------PGGHIGIYVSGKAQ 336 (350)
T ss_pred cCcccC--CeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEc------CCCCEEEEECchhH
Confidence 222221 1111 123577899999999999999999999999999998766677775 46888888887788
Q ss_pred hhHHHHHHHHHhhh
Q 007502 584 EQVYPCIVQFLGRY 597 (601)
Q Consensus 584 e~v~~~I~eFL~~~ 597 (601)
+++++.|.+||+++
T Consensus 337 ~~v~~~i~~wl~~~ 350 (350)
T TIGR01836 337 KEVPPAIGKWLQAR 350 (350)
T ss_pred hhhhHHHHHHHHhC
Confidence 99999999999864
No 5
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.93 E-value=2.1e-24 Score=222.96 Aligned_cols=213 Identities=17% Similarity=0.187 Sum_probs=118.6
Q ss_pred CCCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccc
Q 007502 353 DWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPL 432 (601)
Q Consensus 353 d~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l 432 (601)
.|++++++ +|+.++++.+.. ++++|+||||||.+++.+|.++| ++|+++|++++...............++
T Consensus 82 ~~~~~~~a-~~l~~~l~~l~~------~~~~lvGhS~Gg~va~~~a~~~p--~~v~~lili~~~~~~~~~~~~~~~~~~~ 152 (294)
T PLN02824 82 FYTFETWG-EQLNDFCSDVVG------DPAFVICNSVGGVVGLQAAVDAP--ELVRGVMLINISLRGLHIKKQPWLGRPF 152 (294)
T ss_pred cCCHHHHH-HHHHHHHHHhcC------CCeEEEEeCHHHHHHHHHHHhCh--hheeEEEEECCCcccccccccchhhhHH
Confidence 36788888 999999998732 38999999999999999999976 9999999999764321100000000000
Q ss_pred cChhhhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCccc
Q 007502 433 ADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRD 512 (601)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 512 (601)
................+.. .......+...+............+.+..+...... + .....+...+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~------ 219 (294)
T PLN02824 153 IKAFQNLLRETAVGKAFFK----SVATPETVKNILCQCYHDDSAVTDELVEAILRPGLE--P-GAVDVFLDFIS------ 219 (294)
T ss_pred HHHHHHHHhchhHHHHHHH----hhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCC--c-hHHHHHHHHhc------
Confidence 0000000000000000000 000001111111111111111222222222211110 1 11111111111
Q ss_pred CCCccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHH
Q 007502 513 RGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQ 592 (601)
Q Consensus 513 ~~~~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~e 592 (601)
+.........+.+|++|+|+|+|++|.++|.+.++.+.+.+++. +++++ ++++|+.|.+ .|+++.+.|.+
T Consensus 220 ~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~ 289 (294)
T PLN02824 220 YSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAVE--DFIVL--PGVGHCPQDE------APELVNPLIES 289 (294)
T ss_pred cccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCcc--ceEEe--CCCCCChhhh------CHHHHHHHHHH
Confidence 00111223457899999999999999999999999988877755 77777 6778888876 89999999999
Q ss_pred HHhhh
Q 007502 593 FLGRY 597 (601)
Q Consensus 593 FL~~~ 597 (601)
||+++
T Consensus 290 fl~~~ 294 (294)
T PLN02824 290 FVARH 294 (294)
T ss_pred HHhcC
Confidence 99874
No 6
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.93 E-value=4.5e-24 Score=225.52 Aligned_cols=327 Identities=23% Similarity=0.324 Sum_probs=223.9
Q ss_pred cceEEEEeeCCCeEEEEEEeCCCCCCCCCCCcEEEecCCCCCCcccccC-CCCcHHHHHHhCCCeEEEeCCCCCCCCCCC
Q 007502 80 DELHYVSVANCDWRLALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLS-PGSSFARYMAGQGFDTWILEVRGAGLSVRG 158 (601)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~-~~~~~a~~l~~~G~~v~~~d~rg~g~S~~~ 158 (601)
-|.|.|.+. ||+-|.+.|+.-.+ ..++||+|.||+-.++..|-++ |..++|.-|+++|||||.-+.||--.|.+.
T Consensus 48 ~E~h~V~T~-DgYiL~lhRIp~~~---~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h 123 (403)
T KOG2624|consen 48 VEEHEVTTE-DGYILTLHRIPRGK---KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKH 123 (403)
T ss_pred eEEEEEEcc-CCeEEEEeeecCCC---CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhh
Confidence 378888888 99999999994443 4678999999999999999888 999999999999999999999998777764
Q ss_pred CChhhhhhhccCchhhHHHhhhcchhhHhhhhhccCCcCCCCCCCCCCCCCCCCCcCCccccchhhhhhhhccchhhhhh
Q 007502 159 SNLKEAQQSAHGVSEQMEAVANSTTSEAFAKSATNGVYSADPQLTDFPGALSDSKISPVKKEDDLTRLATVWDESKLVTK 238 (601)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (601)
-...
T Consensus 124 ~~l~---------------------------------------------------------------------------- 127 (403)
T KOG2624|consen 124 KKLS---------------------------------------------------------------------------- 127 (403)
T ss_pred cccC----------------------------------------------------------------------------
Confidence 2110
Q ss_pred hhhhHHhhhhhhhcccccchhhhhhhhhHHHhhhhhhhhhhhhhhHHHhhhhhhhhhhhchhHHHHHHHHHHHHHHHHHH
Q 007502 239 LTETFMSLSERLSGFLSENQSKIMSAKLFDQISKLLEDSQLSEGFNEIRGKLSSLLERRQSSAIAIQIRDLSQNLVNMIE 318 (601)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~la~ 318 (601)
T Consensus 128 -------------------------------------------------------------------------------- 127 (403)
T KOG2624|consen 128 -------------------------------------------------------------------------------- 127 (403)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCeeccccccchhhhhhhcHHHHHhcccceeeeCCCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHH
Q 007502 319 EGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAML 398 (601)
Q Consensus 319 ~Gy~viaPdl~~~~~~l~~~~~~~~~~~~~l~~~d~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~A 398 (601)
|. .....|+|+|++++..|+.+.||++...+|.. +++.||||+|+++.+.++
T Consensus 128 -------~~-------------------~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~--kl~yvGHSQGtt~~fv~l 179 (403)
T KOG2624|consen 128 -------PS-------------------SDKEFWDFSWHEMGTYDLPAMIDYILEKTGQE--KLHYVGHSQGTTTFFVML 179 (403)
T ss_pred -------Cc-------------------CCcceeecchhhhhhcCHHHHHHHHHHhcccc--ceEEEEEEccchhheehh
Confidence 00 00024799999999999999999999998765 999999999999999999
Q ss_pred HhCC-CccccceeEEEccCCCCCCchhHHHhh-ccc---cC-hhhhcCC-CccchHHHHHHhcCCCCCch----hHHHHH
Q 007502 399 SRCG-RESRLAAIVTLASSLDYTSSKSTLKLL-LPL---AD-PAQALNV-PVVPLGALLTAAYPLSSSPP----YVFSWL 467 (601)
Q Consensus 399 a~~P-~~~~V~~lVllap~~~~~~~~~~l~~l-~~l---~~-~~~~~g~-~~~~~~~~~~~~~~~~~~~~----~~~~~l 467 (601)
+..| ...+|+.+++++|.+........+... ..+ .. ....+|. ...+...+...+........ .+...+
T Consensus 180 S~~p~~~~kI~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~ 259 (403)
T KOG2624|consen 180 SERPEYNKKIKSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNF 259 (403)
T ss_pred cccchhhhhhheeeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHH
Confidence 9976 345799999999998554222222111 110 00 0111111 11122222221111111100 011111
Q ss_pred hhhccccc--cCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCccc-----ccc------ccCCCCCCEEEEE
Q 007502 468 NNLISAED--MMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFF-----YKD------HIHKCNIPILAIA 534 (601)
Q Consensus 468 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d-----~~~------~L~~I~vPVLII~ 534 (601)
........ ..+...............+.+...+|.+....+.|..++-... |.. .+.+|++||.+.+
T Consensus 260 ~~~~~G~~~~~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~ 339 (403)
T KOG2624|consen 260 LFLLVGWNSNNWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYY 339 (403)
T ss_pred HHHHcCcchHhhhhcccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEe
Confidence 11111000 0111111122333445566789999999999999887753321 111 6778999999999
Q ss_pred eCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhhc
Q 007502 535 GDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 598 (601)
Q Consensus 535 Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~~ 598 (601)
|++|.++.++++..+....++......+ ..+++.|+||++|.+.++++++.|++.++...
T Consensus 340 g~~D~l~~~~DV~~~~~~~~~~~~~~~~----~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 340 GDNDWLADPEDVLILLLVLPNSVIKYIV----PIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred cCCcccCCHHHHHHHHHhcccccccccc----cCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 9999999999999998888876332222 34899999999999999999999999998654
No 7
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.92 E-value=4.2e-24 Score=224.65 Aligned_cols=206 Identities=14% Similarity=0.198 Sum_probs=113.9
Q ss_pred CchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccC
Q 007502 355 DFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLAD 434 (601)
Q Consensus 355 s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~ 434 (601)
+++.++ +|+.+++++++........+++|+||||||++++.++.++| ++|+++|+++|..............
T Consensus 110 ~~~~~~-~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p--~~v~~lvl~~~~~~~~~~~~~~~~~----- 181 (330)
T PLN02298 110 NVDLVV-EDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANP--EGFDGAVLVAPMCKISDKIRPPWPI----- 181 (330)
T ss_pred CHHHHH-HHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCc--ccceeEEEecccccCCcccCCchHH-----
Confidence 355666 99999999998753333347999999999999999999966 8999999999876443210000000
Q ss_pred hhhhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhh---cC-CCcHHHHHHHHHHHHcCCc
Q 007502 435 PAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNN---FC-TIPAKLILQLTTAFREGGL 510 (601)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~l~~~~~~~~~~~~ 510 (601)
.....+.....+.....+. ...... ..... ......... +. ......+..+.+...
T Consensus 182 ---------~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 241 (330)
T PLN02298 182 ---------PQILTFVARFLPTLAIVPT-----ADLLEK-SVKVP-AKKIIAKRNPMRYNGKPRLGTVVELLRVTD---- 241 (330)
T ss_pred ---------HHHHHHHHHHCCCCccccC-----CCcccc-cccCH-HHHHHHHhCccccCCCccHHHHHHHHHHHH----
Confidence 0000011111110000000 000000 00000 000000000 00 001111111111110
Q ss_pred ccCCCccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHH
Q 007502 511 RDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCI 590 (601)
Q Consensus 511 ~~~~~~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I 590 (601)
.....+.+|++|+|||+|++|.++|++.++++++.++..+++++++ ++++|..+.+ ......+++.+.|
T Consensus 242 -------~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~--~~a~H~~~~e--~pd~~~~~~~~~i 310 (330)
T PLN02298 242 -------YLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIY--DGMMHSLLFG--EPDENIEIVRRDI 310 (330)
T ss_pred -------HHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEc--CCcEeeeecC--CCHHHHHHHHHHH
Confidence 1234678899999999999999999999999999887545588888 4444444432 0111236788999
Q ss_pred HHHHhhhcC
Q 007502 591 VQFLGRYDS 599 (601)
Q Consensus 591 ~eFL~~~~~ 599 (601)
.+||+++..
T Consensus 311 ~~fl~~~~~ 319 (330)
T PLN02298 311 LSWLNERCT 319 (330)
T ss_pred HHHHHHhcc
Confidence 999998753
No 8
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.92 E-value=3.3e-24 Score=213.17 Aligned_cols=207 Identities=18% Similarity=0.228 Sum_probs=136.6
Q ss_pred chhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccCh
Q 007502 356 FDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADP 435 (601)
Q Consensus 356 ~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~ 435 (601)
++..+ +|+...++.++.+...+..+.+|+||||||+|++.++.+.| ...+++|+++|.+...+...+-....
T Consensus 106 ~d~~v-~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p--~~w~G~ilvaPmc~i~~~~kp~p~v~----- 177 (313)
T KOG1455|consen 106 FDLVV-DDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDP--NFWDGAILVAPMCKISEDTKPHPPVI----- 177 (313)
T ss_pred HHHHH-HHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCC--cccccceeeecccccCCccCCCcHHH-----
Confidence 44555 99999999988876666678999999999999999999955 89999999999877655321110000
Q ss_pred hhhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCC
Q 007502 436 AQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGG 515 (601)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 515 (601)
.....+..+.|.....+ ..........+++.......+..+......+....+.++.+
T Consensus 178 ---------~~l~~l~~liP~wk~vp------~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~------- 235 (313)
T KOG1455|consen 178 ---------SILTLLSKLIPTWKIVP------TKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVT------- 235 (313)
T ss_pred ---------HHHHHHHHhCCceeecC------CccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHH-------
Confidence 01112222222111000 00001111224444444433433333333444444444322
Q ss_pred ccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 007502 516 KFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 595 (601)
Q Consensus 516 ~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~ 595 (601)
.+..+.+.++++|.+|+||++|.++.++.++.+++..++.+|++++| ++.-|..|.+ +..++.+.|...|++||+
T Consensus 236 -~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlY--pGm~H~Ll~g--E~~en~e~Vf~DI~~Wl~ 310 (313)
T KOG1455|consen 236 -ADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLY--PGMWHSLLSG--EPDENVEIVFGDIISWLD 310 (313)
T ss_pred -HHHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceecc--ccHHHHhhcC--CCchhHHHHHHHHHHHHH
Confidence 14556889999999999999999999999999999999999999999 6666665541 345678999999999998
Q ss_pred hh
Q 007502 596 RY 597 (601)
Q Consensus 596 ~~ 597 (601)
++
T Consensus 311 ~r 312 (313)
T KOG1455|consen 311 ER 312 (313)
T ss_pred hc
Confidence 76
No 9
>PHA02857 monoglyceride lipase; Provisional
Probab=99.92 E-value=2.4e-23 Score=212.78 Aligned_cols=197 Identities=17% Similarity=0.186 Sum_probs=113.2
Q ss_pred chhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccCh
Q 007502 356 FDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADP 435 (601)
Q Consensus 356 ~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~ 435 (601)
+.+++ +|+..+++.++...+ ..+++|+||||||++++.++.++| +.|+++|+++|........ ....+.
T Consensus 76 ~~~~~-~d~~~~l~~~~~~~~--~~~~~lvG~S~GG~ia~~~a~~~p--~~i~~lil~~p~~~~~~~~-~~~~~~----- 144 (276)
T PHA02857 76 FGVYV-RDVVQHVVTIKSTYP--GVPVFLLGHSMGATISILAAYKNP--NLFTAMILMSPLVNAEAVP-RLNLLA----- 144 (276)
T ss_pred HHHHH-HHHHHHHHHHHhhCC--CCCEEEEEcCchHHHHHHHHHhCc--cccceEEEecccccccccc-HHHHHH-----
Confidence 44555 888888888876543 248999999999999999999965 8899999999875421110 000000
Q ss_pred hhhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcC---CCcHHHHHHHHHHHHcCCccc
Q 007502 436 AQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFC---TIPAKLILQLTTAFREGGLRD 512 (601)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~ 512 (601)
........+......+...++. .+......+..+... ...............
T Consensus 145 -----------~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 199 (276)
T PHA02857 145 -----------AKLMGIFYPNKIVGKLCPESVS--------RDMDEVYKYQYDPLVNHEKIKAGFASQVLKATN------ 199 (276)
T ss_pred -----------HHHHHHhCCCCccCCCCHhhcc--------CCHHHHHHHhcCCCccCCCccHHHHHHHHHHHH------
Confidence 0000000000000000000000 000111111111100 001111111111100
Q ss_pred CCCccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHH
Q 007502 513 RGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQ 592 (601)
Q Consensus 513 ~~~~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~e 592 (601)
+..+.+.++++|+|+|+|++|.++|++.++++.+.+.. +++++++ ++++|..|.| ..+..+++++.|.+
T Consensus 200 -----~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~-~~~~~~~--~~~gH~~~~e---~~~~~~~~~~~~~~ 268 (276)
T PHA02857 200 -----KVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANC-NREIKIY--EGAKHHLHKE---TDEVKKSVMKEIET 268 (276)
T ss_pred -----HHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccC-CceEEEe--CCCcccccCC---chhHHHHHHHHHHH
Confidence 22346788999999999999999999999999998754 4588888 6677777754 22236889999999
Q ss_pred HHhhhcC
Q 007502 593 FLGRYDS 599 (601)
Q Consensus 593 FL~~~~~ 599 (601)
||+++.+
T Consensus 269 ~l~~~~~ 275 (276)
T PHA02857 269 WIFNRVK 275 (276)
T ss_pred HHHHhcc
Confidence 9998743
No 10
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.92 E-value=1.2e-23 Score=215.31 Aligned_cols=197 Identities=20% Similarity=0.236 Sum_probs=113.7
Q ss_pred CCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhcccc
Q 007502 354 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLA 433 (601)
Q Consensus 354 ~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~ 433 (601)
+++++++ +|+.++++++.. ++++|+||||||.+++.+|.++| ++|+++|++++................+.
T Consensus 72 ~~~~~~~-~~~~~~i~~l~~------~~~~LvG~S~GG~va~~~a~~~p--~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 142 (276)
T TIGR02240 72 YRFPGLA-KLAARMLDYLDY------GQVNAIGVSWGGALAQQFAHDYP--ERCKKLILAATAAGAVMVPGKPKVLMMMA 142 (276)
T ss_pred CcHHHHH-HHHHHHHHHhCc------CceEEEEECHHHHHHHHHHHHCH--HHhhheEEeccCCccccCCCchhHHHHhc
Confidence 4566777 899999988732 28999999999999999999966 89999999998764321111000000000
Q ss_pred ChhhhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccC
Q 007502 434 DPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDR 513 (601)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 513 (601)
... .+... ... ......++.... ..+++....................+....
T Consensus 143 ~~~-----------~~~~~---~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 195 (276)
T TIGR02240 143 SPR-----------RYIQP---SHG-IHIAPDIYGGAF----RRDPELAMAHASKVRSGGKLGYYWQLFAGL-------- 195 (276)
T ss_pred Cch-----------hhhcc---ccc-cchhhhhcccee----eccchhhhhhhhhcccCCCchHHHHHHHHc--------
Confidence 000 00000 000 000001111000 001111111110000000001111111100
Q ss_pred CCccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHH
Q 007502 514 GGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQF 593 (601)
Q Consensus 514 ~~~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eF 593 (601)
..+....+++|++|+|+|+|++|.++|++..+++.+.+++. +++++ + ++|..|.+ .|+++++.|.+|
T Consensus 196 --~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~--~~~~i--~-~gH~~~~e------~p~~~~~~i~~f 262 (276)
T TIGR02240 196 --GWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNA--ELHII--D-DGHLFLIT------RAEAVAPIIMKF 262 (276)
T ss_pred --CCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCC--EEEEE--c-CCCchhhc------cHHHHHHHHHHH
Confidence 01123457899999999999999999999999999999987 77777 2 36666654 889999999999
Q ss_pred HhhhcC
Q 007502 594 LGRYDS 599 (601)
Q Consensus 594 L~~~~~ 599 (601)
+++..+
T Consensus 263 l~~~~~ 268 (276)
T TIGR02240 263 LAEERQ 268 (276)
T ss_pred HHHhhh
Confidence 998754
No 11
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.91 E-value=3.4e-23 Score=214.12 Aligned_cols=206 Identities=19% Similarity=0.250 Sum_probs=129.9
Q ss_pred chhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCC--chhHH-Hhhccc
Q 007502 356 FDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTS--SKSTL-KLLLPL 432 (601)
Q Consensus 356 ~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~--~~~~l-~~l~~l 432 (601)
|.+|. +|+.++++.+... ..+.+++|+||||||.|++.++.+++ .+|+++|+.+|...... ..... ......
T Consensus 86 f~~~~-~dl~~~~~~~~~~--~~~~p~~l~gHSmGg~Ia~~~~~~~~--~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~ 160 (298)
T COG2267 86 FADYV-DDLDAFVETIAEP--DPGLPVFLLGHSMGGLIALLYLARYP--PRIDGLVLSSPALGLGGAILRLILARLALKL 160 (298)
T ss_pred HHHHH-HHHHHHHHHHhcc--CCCCCeEEEEeCcHHHHHHHHHHhCC--ccccEEEEECccccCChhHHHHHHHHHhccc
Confidence 56776 9999999999765 22358999999999999999999965 99999999999987763 11111 111000
Q ss_pred cChhhhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCccc
Q 007502 433 ADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRD 512 (601)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 512 (601)
+..+.+...... - . ...........+++....+..+..+.........+...+....
T Consensus 161 -----------------~~~~~p~~~~~~-~-~-~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~--- 217 (298)
T COG2267 161 -----------------LGRIRPKLPVDS-N-L-LEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGR--- 217 (298)
T ss_pred -----------------ccccccccccCc-c-c-ccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhc---
Confidence 000100000000 0 0 0000011112245555555555443443333333333332221
Q ss_pred CCCccccccccCCCCCCEEEEEeCCCCCCC-HHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccch--hhHHHH
Q 007502 513 RGGKFFYKDHIHKCNIPILAIAGDQDLICP-PEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAV--EQVYPC 589 (601)
Q Consensus 513 ~~~~~d~~~~L~~I~vPVLII~Ge~D~iVp-~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~p--e~v~~~ 589 (601)
........++++|+|+++|++|.+++ .+...++++.....+++++++ +++.|..|.| ... +++++.
T Consensus 218 ----~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~--~g~~He~~~E-----~~~~r~~~~~~ 286 (298)
T COG2267 218 ----VPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVI--PGAYHELLNE-----PDRAREEVLKD 286 (298)
T ss_pred ----ccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEec--CCcchhhhcC-----cchHHHHHHHH
Confidence 01233467889999999999999999 798999998887766789988 6666666665 344 999999
Q ss_pred HHHHHhhhcCC
Q 007502 590 IVQFLGRYDSV 600 (601)
Q Consensus 590 I~eFL~~~~~~ 600 (601)
+.+||.++...
T Consensus 287 ~~~~l~~~~~~ 297 (298)
T COG2267 287 ILAWLAEALPS 297 (298)
T ss_pred HHHHHHhhccC
Confidence 99999987654
No 12
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.91 E-value=3.3e-23 Score=215.06 Aligned_cols=198 Identities=14% Similarity=0.169 Sum_probs=109.3
Q ss_pred CCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCc--hhHHHhhcc
Q 007502 354 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSS--KSTLKLLLP 431 (601)
Q Consensus 354 ~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~--~~~l~~l~~ 431 (601)
|++++++ +|+.++++.+ +. .+++|+||||||.+++.++.++| ++|+++|++++....... .........
T Consensus 96 ~~~~~~a-~~l~~~l~~l----~~--~~v~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 166 (302)
T PRK00870 96 YTYARHV-EWMRSWFEQL----DL--TDVTLVCQDWGGLIGLRLAAEHP--DRFARLVVANTGLPTGDGPMPDAFWAWRA 166 (302)
T ss_pred CCHHHHH-HHHHHHHHHc----CC--CCEEEEEEChHHHHHHHHHHhCh--hheeEEEEeCCCCCCccccchHHHhhhhc
Confidence 5677887 8888888876 33 28999999999999999999966 899999999875322111 000000000
Q ss_pred ccChhhhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHH---HcC
Q 007502 432 LADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAF---REG 508 (601)
Q Consensus 432 l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~ 508 (601)
+.. ..+..... .++.... ......+....+. ..... .......+.+ ...
T Consensus 167 ~~~-----~~~~~~~~-----------------~~~~~~~--~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~ 218 (302)
T PRK00870 167 FSQ-----YSPVLPVG-----------------RLVNGGT--VRDLSDAVRAAYD-APFPD---ESYKAGARAFPLLVPT 218 (302)
T ss_pred ccc-----cCchhhHH-----------------HHhhccc--cccCCHHHHHHhh-cccCC---hhhhcchhhhhhcCCC
Confidence 000 00000000 0000000 0001111111110 00000 0000000000 000
Q ss_pred Cccc--CCCccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCc-eEEEEecCCCCCCCCcccccccccchhh
Q 007502 509 GLRD--RGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDL-VTYKVFGEPSGPHYAHYDLVGGRMAVEQ 585 (601)
Q Consensus 509 ~~~~--~~~~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~-~~l~vi~~~~~~h~gH~dfi~g~~~pe~ 585 (601)
.... ..........+.++++|+++|+|++|.++|.+. +.+.+.+++.. +.++++ ++++|+.|.+ .|++
T Consensus 219 ~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i--~~~gH~~~~e------~p~~ 289 (302)
T PRK00870 219 SPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTI--KGAGHFLQED------SGEE 289 (302)
T ss_pred CCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeee--cCCCccchhh------ChHH
Confidence 0000 000001124578899999999999999999876 88999998762 236667 6677777765 8899
Q ss_pred HHHHHHHHHhhh
Q 007502 586 VYPCIVQFLGRY 597 (601)
Q Consensus 586 v~~~I~eFL~~~ 597 (601)
+.+.|.+||+++
T Consensus 290 ~~~~l~~fl~~~ 301 (302)
T PRK00870 290 LAEAVLEFIRAT 301 (302)
T ss_pred HHHHHHHHHhcC
Confidence 999999999875
No 13
>PRK10749 lysophospholipase L2; Provisional
Probab=99.91 E-value=6.2e-23 Score=216.00 Aligned_cols=211 Identities=15% Similarity=0.169 Sum_probs=113.3
Q ss_pred CCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHH--Hhhcc
Q 007502 354 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTL--KLLLP 431 (601)
Q Consensus 354 ~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l--~~l~~ 431 (601)
+++++++ +|+.++++.+....+. .+++++||||||.+++.++.++| +.|+++|+++|........... ..+..
T Consensus 108 ~~~~~~~-~d~~~~~~~~~~~~~~--~~~~l~GhSmGG~ia~~~a~~~p--~~v~~lvl~~p~~~~~~~~~~~~~~~~~~ 182 (330)
T PRK10749 108 ERFNDYV-DDLAAFWQQEIQPGPY--RKRYALAHSMGGAILTLFLQRHP--GVFDAIALCAPMFGIVLPLPSWMARRILN 182 (330)
T ss_pred ccHHHHH-HHHHHHHHHHHhcCCC--CCeEEEEEcHHHHHHHHHHHhCC--CCcceEEEECchhccCCCCCcHHHHHHHH
Confidence 3567887 9999999987655333 48999999999999999999966 8999999999875432111100 00000
Q ss_pred ccChhhhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccc-cCCHHHHHH---HHHhhc-CCCcHHHHHHHHHHHH
Q 007502 432 LADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAED-MMHPELLKK---LVLNNF-CTIPAKLILQLTTAFR 506 (601)
Q Consensus 432 l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~---~~~~~~-~~~~~~~l~~~~~~~~ 506 (601)
+......... .+... ...|......... ..+.+.... ...+.. .......+..+...+.
T Consensus 183 ~~~~~~~~~~-----------~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (330)
T PRK10749 183 WAEGHPRIRD-----------GYAIG-----TGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESIL 246 (330)
T ss_pred HHHHhcCCCC-----------cCCCC-----CCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHH
Confidence 0000000000 00000 0000000000000 001111111 111110 0000001111111111
Q ss_pred cCCcccCCCccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCC-----CceEEEEecCCCCCCCCccccccccc
Q 007502 507 EGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPE-----DLVTYKVFGEPSGPHYAHYDLVGGRM 581 (601)
Q Consensus 507 ~~~~~~~~~~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~-----~~~~l~vi~~~~~~h~gH~dfi~g~~ 581 (601)
.. ......+.++++|+|+|+|++|.+++++.++.+++.+++ .+++++++ ++++|..+.| ...
T Consensus 247 ~~--------~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~--~gagH~~~~E---~~~ 313 (330)
T PRK10749 247 AG--------EQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVI--KGAYHEILFE---KDA 313 (330)
T ss_pred HH--------HHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEe--CCCcchhhhC---CcH
Confidence 00 012345678999999999999999999999999887743 23478888 5555555543 222
Q ss_pred chhhHHHHHHHHHhhhc
Q 007502 582 AVEQVYPCIVQFLGRYD 598 (601)
Q Consensus 582 ~pe~v~~~I~eFL~~~~ 598 (601)
..+.+.+.|.+||+++.
T Consensus 314 ~r~~v~~~i~~fl~~~~ 330 (330)
T PRK10749 314 MRSVALNAIVDFFNRHN 330 (330)
T ss_pred HHHHHHHHHHHHHhhcC
Confidence 36889999999998763
No 14
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.90 E-value=2.4e-22 Score=215.72 Aligned_cols=199 Identities=17% Similarity=0.211 Sum_probs=113.4
Q ss_pred CchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCC-CccccceeEEEccCCCCCCchhHHHhhcccc
Q 007502 355 DFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCG-RESRLAAIVTLASSLDYTSSKSTLKLLLPLA 433 (601)
Q Consensus 355 s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P-~~~~V~~lVllap~~~~~~~~~~l~~l~~l~ 433 (601)
+++.++ +|+.++++++..+.+ ..+++++||||||.+++.++. +| .+++|+++|+.+|.............+.
T Consensus 186 ~~~~~~-~Dl~~~l~~l~~~~~--~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~--- 258 (395)
T PLN02652 186 SLDYVV-EDTEAFLEKIRSENP--GVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVA--- 258 (395)
T ss_pred CHHHHH-HHHHHHHHHHHHhCC--CCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHH---
Confidence 355666 999999999987643 237999999999999997764 44 2258999999998765432211101110
Q ss_pred ChhhhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCC---CcHHHHHHHHHHHHcCCc
Q 007502 434 DPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCT---IPAKLILQLTTAFREGGL 510 (601)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~ 510 (601)
.+.....+....... .. .......+.........+.... ..............
T Consensus 259 --------------~l~~~~~p~~~~~~~-----~~-~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~---- 314 (395)
T PLN02652 259 --------------PIFSLVAPRFQFKGA-----NK-RGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISS---- 314 (395)
T ss_pred --------------HHHHHhCCCCcccCc-----cc-ccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHH----
Confidence 011111110000000 00 0000000111111111111100 00011111111110
Q ss_pred ccCCCccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHH
Q 007502 511 RDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCI 590 (601)
Q Consensus 511 ~~~~~~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I 590 (601)
...+.+.+|++|+|+|+|++|.++|++.++++++.+++..++++++ +++.|..+.+ +.++++++.|
T Consensus 315 -------~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~--~ga~H~l~~e-----~~~e~v~~~I 380 (395)
T PLN02652 315 -------YLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLY--DGFLHDLLFE-----PEREEVGRDI 380 (395)
T ss_pred -------HHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEE--CCCeEEeccC-----CCHHHHHHHH
Confidence 1234678899999999999999999999999999987656788888 4444444332 4689999999
Q ss_pred HHHHhhhc
Q 007502 591 VQFLGRYD 598 (601)
Q Consensus 591 ~eFL~~~~ 598 (601)
.+||+.+.
T Consensus 381 ~~FL~~~~ 388 (395)
T PLN02652 381 IDWMEKRL 388 (395)
T ss_pred HHHHHHHh
Confidence 99998764
No 15
>PLN02965 Probable pheophorbidase
Probab=99.90 E-value=6.3e-23 Score=207.72 Aligned_cols=200 Identities=16% Similarity=0.197 Sum_probs=112.4
Q ss_pred CCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCc--hhHHHh-hc
Q 007502 354 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSS--KSTLKL-LL 430 (601)
Q Consensus 354 ~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~--~~~l~~-l~ 430 (601)
|++++++ +|+.++++.+... ++++|+||||||.+++.++.++| ++|+++|++++....... ...... ..
T Consensus 52 ~~~~~~a-~dl~~~l~~l~~~-----~~~~lvGhSmGG~ia~~~a~~~p--~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 123 (255)
T PLN02965 52 SSSDQYN-RPLFALLSDLPPD-----HKVILVGHSIGGGSVTEALCKFT--DKISMAIYVAAAMVKPGSIISPRLKNVME 123 (255)
T ss_pred CCHHHHH-HHHHHHHHhcCCC-----CCEEEEecCcchHHHHHHHHhCc--hheeEEEEEccccCCCCCCccHHHHhhhh
Confidence 5567887 9999999887311 38999999999999999999976 999999999976321110 000000 00
Q ss_pred cccChhhhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCc
Q 007502 431 PLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGL 510 (601)
Q Consensus 431 ~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 510 (601)
.... ..... ..... ........ ...+........ ..+..........+.....
T Consensus 124 ~~~~-~~~~~---------~~~~~-~~~~~~~~-------------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 176 (255)
T PLN02965 124 GTEK-IWDYT---------FGEGP-DKPPTGIM-------------MKPEFVRHYYYN---QSPLEDYTLSSKLLRPAPV 176 (255)
T ss_pred cccc-ceeee---------eccCC-CCCcchhh-------------cCHHHHHHHHhc---CCCHHHHHHHHHhcCCCCC
Confidence 0000 00000 00000 00000000 000000000000 0011000000111110001
Q ss_pred ccCCCccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHH
Q 007502 511 RDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCI 590 (601)
Q Consensus 511 ~~~~~~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I 590 (601)
.......++...+..+++|+++|+|++|.++|++..+.+.+.++++ +++++ ++++|+.|.+ .|+++++.|
T Consensus 177 ~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a--~~~~i--~~~GH~~~~e------~p~~v~~~l 246 (255)
T PLN02965 177 RAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPA--QTYVL--EDSDHSAFFS------VPTTLFQYL 246 (255)
T ss_pred cchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcc--eEEEe--cCCCCchhhc------CHHHHHHHH
Confidence 0000011122355679999999999999999999999999999987 77777 6777777775 999999999
Q ss_pred HHHHhhhc
Q 007502 591 VQFLGRYD 598 (601)
Q Consensus 591 ~eFL~~~~ 598 (601)
.+|+++..
T Consensus 247 ~~~~~~~~ 254 (255)
T PLN02965 247 LQAVSSLQ 254 (255)
T ss_pred HHHHHHhc
Confidence 99988653
No 16
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.90 E-value=1.2e-22 Score=209.96 Aligned_cols=215 Identities=16% Similarity=0.160 Sum_probs=112.0
Q ss_pred CCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhcccc
Q 007502 354 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLA 433 (601)
Q Consensus 354 ~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~ 433 (601)
|++++++ +|+.++++.+. . ++++++||||||.+++.++.++| ++|+++|++++.................
T Consensus 74 ~~~~~~a-~dl~~ll~~l~----~--~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lil~~~~~~~~~~~~~~~~~~~~- 143 (295)
T PRK03592 74 YTFADHA-RYLDAWFDALG----L--DDVVLVGHDWGSALGFDWAARHP--DRVRGIAFMEAIVRPMTWDDFPPAVREL- 143 (295)
T ss_pred CCHHHHH-HHHHHHHHHhC----C--CCeEEEEECHHHHHHHHHHHhCh--hheeEEEEECCCCCCcchhhcchhHHHH-
Confidence 4566777 99999998873 2 38999999999999999999976 9999999999854321110000000000
Q ss_pred ChhhhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCccc-
Q 007502 434 DPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRD- 512 (601)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~- 512 (601)
...+..+... ... ......+...++..... ....++....+...............+.+.+.......
T Consensus 144 --~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (295)
T PRK03592 144 --FQALRSPGEG-EEM------VLEENVFIERVLPGSIL--RPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPAD 212 (295)
T ss_pred --HHHHhCcccc-ccc------ccchhhHHhhcccCccc--ccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchh
Confidence 0000000000 000 00000011111110000 01122222222211100000111111111111000000
Q ss_pred C-CCccccccccCCCCCCEEEEEeCCCCCCCHHHHHHH-HHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHH
Q 007502 513 R-GGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEET-VKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCI 590 (601)
Q Consensus 513 ~-~~~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l-~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I 590 (601)
. ....++...+.+|++|+|+|+|++|.++++....++ .+.+++. +++++ ++++|+.|.+ .|+++.+.|
T Consensus 213 ~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~v~~~i 282 (295)
T PRK03592 213 VVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQL--EITVF--GAGLHFAQED------SPEEIGAAI 282 (295)
T ss_pred hHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhc--ceeec--cCcchhhhhc------CHHHHHHHH
Confidence 0 000122345788999999999999999955544444 4566765 77877 6677777765 899999999
Q ss_pred HHHHhhhcC
Q 007502 591 VQFLGRYDS 599 (601)
Q Consensus 591 ~eFL~~~~~ 599 (601)
.+|+++...
T Consensus 283 ~~fl~~~~~ 291 (295)
T PRK03592 283 AAWLRRLRL 291 (295)
T ss_pred HHHHHHhcc
Confidence 999998753
No 17
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.89 E-value=6.7e-22 Score=199.04 Aligned_cols=189 Identities=15% Similarity=0.238 Sum_probs=108.2
Q ss_pred CCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhcccc
Q 007502 354 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLA 433 (601)
Q Consensus 354 ~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~ 433 (601)
+++.+++ +|+.++++++ +. ++++|+||||||.+++.+|.++| ++|+++|++++...............
T Consensus 62 ~~~~~~~-~d~~~~l~~l----~~--~~~~lvGhS~Gg~va~~~a~~~~--~~v~~lvli~~~~~~~~~~~~~~~~~--- 129 (255)
T PRK10673 62 MNYPAMA-QDLLDTLDAL----QI--EKATFIGHSMGGKAVMALTALAP--DRIDKLVAIDIAPVDYHVRRHDEIFA--- 129 (255)
T ss_pred CCHHHHH-HHHHHHHHHc----CC--CceEEEEECHHHHHHHHHHHhCH--hhcceEEEEecCCCCccchhhHHHHH---
Confidence 4566777 9999999887 22 28999999999999999999965 89999999975322111000000000
Q ss_pred ChhhhcCCCccchHHHHHHhcC-CCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCC----CcHHHHHHHHHHHHcC
Q 007502 434 DPAQALNVPVVPLGALLTAAYP-LSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCT----IPAKLILQLTTAFREG 508 (601)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~ 508 (601)
. ...... ...........+.... ..+....+....... .............
T Consensus 130 --------------~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 185 (255)
T PRK10673 130 --------------A-INAVSEAGATTRQQAAAIMRQHL------NEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHI--- 185 (255)
T ss_pred --------------H-HHHhhhcccccHHHHHHHHHHhc------CCHHHHHHHHhcCCcceeEeeHHHHHHhHHHH---
Confidence 0 000000 0000000000000000 001111111111000 0001111111110
Q ss_pred CcccCCCccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHH
Q 007502 509 GLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYP 588 (601)
Q Consensus 509 ~~~~~~~~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~ 588 (601)
...+.++++++|+|+|+|++|.+++.+..+.+.+.+++. +++++ ++++|+.+.+ .|+++.+
T Consensus 186 ---------~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~~------~p~~~~~ 246 (255)
T PRK10673 186 ---------VGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQA--RAHVI--AGAGHWVHAE------KPDAVLR 246 (255)
T ss_pred ---------hCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCc--EEEEe--CCCCCeeecc------CHHHHHH
Confidence 112356778999999999999999999999999999987 77777 5666666554 7899999
Q ss_pred HHHHHHhhh
Q 007502 589 CIVQFLGRY 597 (601)
Q Consensus 589 ~I~eFL~~~ 597 (601)
.|.+||+++
T Consensus 247 ~l~~fl~~~ 255 (255)
T PRK10673 247 AIRRYLNDK 255 (255)
T ss_pred HHHHHHhcC
Confidence 999999863
No 18
>PLN02578 hydrolase
Probab=99.89 E-value=1.3e-21 Score=208.04 Aligned_cols=215 Identities=16% Similarity=0.230 Sum_probs=116.8
Q ss_pred CCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhcc-c
Q 007502 354 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLP-L 432 (601)
Q Consensus 354 ~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~-l 432 (601)
|+...++ +|+.++++.+.. ++++++||||||.+++.+|.++| ++|+++|++++...+............ .
T Consensus 133 ~~~~~~a-~~l~~~i~~~~~------~~~~lvG~S~Gg~ia~~~A~~~p--~~v~~lvLv~~~~~~~~~~~~~~~~~~~~ 203 (354)
T PLN02578 133 YDAMVWR-DQVADFVKEVVK------EPAVLVGNSLGGFTALSTAVGYP--ELVAGVALLNSAGQFGSESREKEEAIVVE 203 (354)
T ss_pred cCHHHHH-HHHHHHHHHhcc------CCeEEEEECHHHHHHHHHHHhCh--HhcceEEEECCCccccccccccccccccc
Confidence 4555666 888888887743 38999999999999999999966 999999999876543321110000000 0
Q ss_pred cChhhhcCCCccchHHHHHHh-----cCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHc
Q 007502 433 ADPAQALNVPVVPLGALLTAA-----YPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFRE 507 (601)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 507 (601)
......... .+........ +................+......+...................+......+..
T Consensus 204 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (354)
T PLN02578 204 ETVLTRFVV--KPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLF 281 (354)
T ss_pred cchhhHHHh--HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhc
Confidence 000000000 0000000000 000000011111111111111111222122111111111111222222222110
Q ss_pred CCcccCCCccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHH
Q 007502 508 GGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVY 587 (601)
Q Consensus 508 ~~~~~~~~~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~ 587 (601)
. ...++..+.++++++|+|+|+|++|.++|.+.++++.+.+++. +++++ +++|+.|.+ .|+++.
T Consensus 282 ~-----~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a--~l~~i---~~GH~~~~e------~p~~~~ 345 (354)
T PLN02578 282 N-----QSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDT--TLVNL---QAGHCPHDE------VPEQVN 345 (354)
T ss_pred C-----CCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC--EEEEe---CCCCCcccc------CHHHHH
Confidence 0 1122344568899999999999999999999999999999987 77777 467888876 899999
Q ss_pred HHHHHHHh
Q 007502 588 PCIVQFLG 595 (601)
Q Consensus 588 ~~I~eFL~ 595 (601)
+.|.+|++
T Consensus 346 ~~I~~fl~ 353 (354)
T PLN02578 346 KALLEWLS 353 (354)
T ss_pred HHHHHHHh
Confidence 99999996
No 19
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.89 E-value=2e-21 Score=198.77 Aligned_cols=194 Identities=16% Similarity=0.210 Sum_probs=108.9
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccChhhhcCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 441 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~~~~~g~ 441 (601)
+|+.++++.+ +. ++++++||||||.+++.++.++| ++|+++|++++.......... .
T Consensus 89 ~~l~~~l~~l----~~--~~~~lvG~S~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~~~~~~~------~--------- 145 (282)
T TIGR03343 89 RAVKGLMDAL----DI--EKAHLVGNSMGGATALNFALEYP--DRIGKLILMGPGGLGPSLFAP------M--------- 145 (282)
T ss_pred HHHHHHHHHc----CC--CCeeEEEECchHHHHHHHHHhCh--HhhceEEEECCCCCCcccccc------C---------
Confidence 7777777776 33 38999999999999999999966 999999999875321100000 0
Q ss_pred CccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCcccccc
Q 007502 442 PVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKD 521 (601)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~ 521 (601)
+......+.... .. ........++..........+.+........ ....+ .....+........ ....+...
T Consensus 146 ~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~----~~~~~~~~ 217 (282)
T TIGR03343 146 PMEGIKLLFKLY-AE-PSYETLKQMLNVFLFDQSLITEELLQGRWEN-IQRQP-EHLKNFLISSQKAP----LSTWDVTA 217 (282)
T ss_pred chHHHHHHHHHh-cC-CCHHHHHHHHhhCccCcccCcHHHHHhHHHH-hhcCH-HHHHHHHHhccccc----cccchHHH
Confidence 000000000000 00 0000011111111000111111111111110 01111 11111111111000 01223345
Q ss_pred ccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 007502 522 HIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 596 (601)
Q Consensus 522 ~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~ 596 (601)
.+++|++|+|+|+|++|.++|++.++++.+.+++. +++++ ++++|+.+.+ .|+++.+.|.+||++
T Consensus 218 ~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~--~~~~i--~~agH~~~~e------~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 218 RLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDA--QLHVF--SRCGHWAQWE------HADAFNRLVIDFLRN 282 (282)
T ss_pred HHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCC--EEEEe--CCCCcCCccc------CHHHHHHHHHHHhhC
Confidence 68899999999999999999999999999999987 88888 6677777765 899999999999963
No 20
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.89 E-value=3.8e-21 Score=211.44 Aligned_cols=207 Identities=18% Similarity=0.255 Sum_probs=122.9
Q ss_pred chhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHH----HHHHhCCCccccceeEEEccCCCCCCchhHHHhhcc
Q 007502 356 FDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLY----AMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLP 431 (601)
Q Consensus 356 ~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl----~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~ 431 (601)
+++|+.+++.++++.++..+|.+ +++++||||||.++. .+++.++ +++|+++|++++++++.... .+..+..
T Consensus 240 ~ddY~~~~i~~al~~v~~~~g~~--kv~lvG~cmGGtl~a~ala~~aa~~~-~~rv~slvll~t~~Df~~~G-~l~~f~~ 315 (532)
T TIGR01838 240 FDDYIRDGVIAALEVVEAITGEK--QVNCVGYCIGGTLLSTALAYLAARGD-DKRIKSATFFTTLLDFSDPG-ELGVFVD 315 (532)
T ss_pred hhhhHHHHHHHHHHHHHHhcCCC--CeEEEEECcCcHHHHHHHHHHHHhCC-CCccceEEEEecCcCCCCcc-hhhhhcC
Confidence 45676567899999998887764 899999999999863 2455531 47899999999999887542 2222111
Q ss_pred ccC---hhhhcCCCccchHHHHHHhcCCCCCchh-HHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHH-HH
Q 007502 432 LAD---PAQALNVPVVPLGALLTAAYPLSSSPPY-VFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTA-FR 506 (601)
Q Consensus 432 l~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~ 506 (601)
... ........+...+..+...+.+.+.... +..++...+....... ....+........|.....++.+. +.
T Consensus 316 ~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~--fdll~Wn~D~t~lP~~~~~~~lr~ly~ 393 (532)
T TIGR01838 316 EEIVAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVP--FDLLFWNSDSTNLPGKMHNFYLRNLYL 393 (532)
T ss_pred chhHHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccc--hhHHHHhccCccchHHHHHHHHHHHHh
Confidence 000 0011111112223334444444433322 3333332222221111 111222333456778888887754 44
Q ss_pred cCCcccCCCccc---cccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcc
Q 007502 507 EGGLRDRGGKFF---YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHY 574 (601)
Q Consensus 507 ~~~~~~~~~~~d---~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~ 574 (601)
.+.+.. +.+. ....+++|++|+|+|+|++|.++|++.++.+.+.+++. +..++ ++++|..|.
T Consensus 394 ~N~L~~--G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~--~~~vL--~~sGHi~~i 458 (532)
T TIGR01838 394 QNALTT--GGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGP--KTFVL--GESGHIAGV 458 (532)
T ss_pred cCCCcC--CeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCC--EEEEE--CCCCCchHh
Confidence 444442 3322 33478999999999999999999999999999999865 55555 455555543
No 21
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.88 E-value=3.5e-21 Score=209.77 Aligned_cols=66 Identities=14% Similarity=0.106 Sum_probs=54.4
Q ss_pred cCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 007502 523 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 597 (601)
Q Consensus 523 L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~ 597 (601)
+.+|++|+|+|+|++|.++|++..+.+.+.+|+. +++++ ++++|..+. . +.|+++++.|.+|.+..
T Consensus 414 ~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a--~l~vI--~~aGH~~~v---~--e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 414 RDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRA--RVKVI--DDKDHITIV---V--GRQKEFARELEEIWRRS 479 (481)
T ss_pred HHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCC--EEEEe--CCCCCcchh---h--cCHHHHHHHHHHHhhcc
Confidence 3478999999999999999999999999999987 88888 455555443 1 27899999999998653
No 22
>PRK06489 hypothetical protein; Provisional
Probab=99.88 E-value=4.8e-21 Score=204.10 Aligned_cols=75 Identities=20% Similarity=0.255 Sum_probs=59.5
Q ss_pred ccccccCCCCCCEEEEEeCCCCCCCHHHH--HHHHHHCCCCceEEEEecCCCC-CCCCcccccccccchhhHHHHHHHHH
Q 007502 518 FYKDHIHKCNIPILAIAGDQDLICPPEAV--EETVKLLPEDLVTYKVFGEPSG-PHYAHYDLVGGRMAVEQVYPCIVQFL 594 (601)
Q Consensus 518 d~~~~L~~I~vPVLII~Ge~D~iVp~e~~--~~l~~~lp~~~~~l~vi~~~~~-~h~gH~dfi~g~~~pe~v~~~I~eFL 594 (601)
+..+.+.+|++|+|+|+|++|.++|++.+ +++.+.+|+. +++++ +++ .+++|.-+ +.|+++++.|.+||
T Consensus 283 d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a--~l~~i--~~a~~~~GH~~~----e~P~~~~~~i~~FL 354 (360)
T PRK06489 283 NPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHG--RLVLI--PASPETRGHGTT----GSAKFWKAYLAEFL 354 (360)
T ss_pred ChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCC--eEEEE--CCCCCCCCcccc----cCHHHHHHHHHHHH
Confidence 44567899999999999999999999875 7899999987 88888 443 11344321 28999999999999
Q ss_pred hhhcCC
Q 007502 595 GRYDSV 600 (601)
Q Consensus 595 ~~~~~~ 600 (601)
+++.++
T Consensus 355 ~~~~~~ 360 (360)
T PRK06489 355 AQVPKR 360 (360)
T ss_pred HhcccC
Confidence 987653
No 23
>PRK13604 luxD acyl transferase; Provisional
Probab=99.88 E-value=4.9e-21 Score=195.60 Aligned_cols=71 Identities=21% Similarity=0.432 Sum_probs=57.5
Q ss_pred eEEEEeeCCCeEEEEEEeCCCCCCCCCCCcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCCCCC-CCCCCC
Q 007502 82 LHYVSVANCDWRLALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGA-GLSVRG 158 (601)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~rg~-g~S~~~ 158 (601)
-|...+. +|.+|.+|...|....+++++.||++||++.+...| ..+|++|+++||.|+++|.||+ |.|.+.
T Consensus 11 ~~~~~~~-dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~-----~~~A~~La~~G~~vLrfD~rg~~GeS~G~ 82 (307)
T PRK13604 11 DHVICLE-NGQSIRVWETLPKENSPKKNNTILIASGFARRMDHF-----AGLAEYLSSNGFHVIRYDSLHHVGLSSGT 82 (307)
T ss_pred hheEEcC-CCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHH-----HHHHHHHHHCCCEEEEecCCCCCCCCCCc
Confidence 4666666 899999997777543444567899999999987544 4899999999999999999998 988653
No 24
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.88 E-value=2.7e-21 Score=191.20 Aligned_cols=192 Identities=23% Similarity=0.344 Sum_probs=108.8
Q ss_pred CCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhcccc
Q 007502 354 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLA 433 (601)
Q Consensus 354 ~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~ 433 (601)
+++++++ +|+.++++.+.. .+++++||||||++++.+|.++| ++|+++|++++................+.
T Consensus 60 ~~~~~~~-~~~~~~i~~~~~------~~v~liG~S~Gg~~a~~~a~~~p--~~v~~li~~~~~~~~~~~~~~~~~~~~~~ 130 (251)
T TIGR02427 60 YSIEDLA-DDVLALLDHLGI------ERAVFCGLSLGGLIAQGLAARRP--DRVRALVLSNTAAKIGTPESWNARIAAVR 130 (251)
T ss_pred CCHHHHH-HHHHHHHHHhCC------CceEEEEeCchHHHHHHHHHHCH--HHhHHHhhccCccccCchhhHHHHHhhhh
Confidence 4456666 888888877632 38999999999999999999955 89999999987643322110000000000
Q ss_pred ChhhhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccC
Q 007502 434 DPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDR 513 (601)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 513 (601)
..+ ....... ....++..... .........+. ......+...+......+.
T Consensus 131 ----~~~-----~~~~~~~---------~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------- 181 (251)
T TIGR02427 131 ----AEG-----LAALADA---------VLERWFTPGFR---EAHPARLDLYR-NMLVRQPPDGYAGCCAAIR------- 181 (251)
T ss_pred ----hcc-----HHHHHHH---------HHHHHcccccc---cCChHHHHHHH-HHHHhcCHHHHHHHHHHHh-------
Confidence 000 0000000 00011100000 00111111111 1111111111111111111
Q ss_pred CCccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHH
Q 007502 514 GGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQF 593 (601)
Q Consensus 514 ~~~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eF 593 (601)
..+....+.++++|+++++|++|.++|.+..+.+.+.+++. +++++ ++++|..+.+ .|+++.+.|.+|
T Consensus 182 --~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~~------~p~~~~~~i~~f 249 (251)
T TIGR02427 182 --DADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGA--RFAEI--RGAGHIPCVE------QPEAFNAALRDF 249 (251)
T ss_pred --cccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCc--eEEEE--CCCCCccccc------ChHHHHHHHHHH
Confidence 11334567889999999999999999999999999998876 77777 5556666554 789999999999
Q ss_pred Hh
Q 007502 594 LG 595 (601)
Q Consensus 594 L~ 595 (601)
|+
T Consensus 250 l~ 251 (251)
T TIGR02427 250 LR 251 (251)
T ss_pred hC
Confidence 84
No 25
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.87 E-value=8.8e-21 Score=226.36 Aligned_cols=231 Identities=18% Similarity=0.306 Sum_probs=134.3
Q ss_pred CCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchh-HHH--hhc
Q 007502 354 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKS-TLK--LLL 430 (601)
Q Consensus 354 ~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~-~l~--~l~ 430 (601)
+++.+++ .++.++++.++...+ ++++|+||||||++++.+++.++ +++|+++|++++++++..... .+. ...
T Consensus 119 ~~l~~~i-~~l~~~l~~v~~~~~---~~v~lvG~s~GG~~a~~~aa~~~-~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~ 193 (994)
T PRK07868 119 RNLADHV-VALSEAIDTVKDVTG---RDVHLVGYSQGGMFCYQAAAYRR-SKDIASIVTFGSPVDTLAALPMGIPAGLAA 193 (994)
T ss_pred CCHHHHH-HHHHHHHHHHHHhhC---CceEEEEEChhHHHHHHHHHhcC-CCccceEEEEecccccCCCCcccchhhhhh
Confidence 4566776 677888887766643 38999999999999999988654 468999999999887643210 000 000
Q ss_pred c---cc-Ch-hhhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhh-cCCCcHHHHHHHHHH
Q 007502 431 P---LA-DP-AQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNN-FCTIPAKLILQLTTA 504 (601)
Q Consensus 431 ~---l~-~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~ 504 (601)
. +. .. .....++.......+..+.+... ......++..+.......+.+....+.... +...+.....++.+.
T Consensus 194 ~~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~-~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~ 272 (994)
T PRK07868 194 AAADFMADHVFNRLDIPGWMARTGFQMLDPVKT-AKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQ 272 (994)
T ss_pred cccccchhhhhhcCCCCHHHHHHHHHhcChhHH-HHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHH
Confidence 0 00 00 00011111111111111111100 001111222222212222333333333222 213334445555554
Q ss_pred HHc-CCcccCCCccccc---cccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEE-EEecCCCCCCCCccccccc
Q 007502 505 FRE-GGLRDRGGKFFYK---DHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTY-KVFGEPSGPHYAHYDLVGG 579 (601)
Q Consensus 505 ~~~-~~~~~~~~~~d~~---~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l-~vi~~~~~~h~gH~dfi~g 579 (601)
+.. +.+. .+.+... ..+++|++|+|+|+|++|.++|++.++.+.+.+++. ++ .++ .+++|+.++.|
T Consensus 273 ~~~~n~~~--~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a--~~~~~~-----~~~GH~g~~~g 343 (994)
T PRK07868 273 FIAHNRMM--TGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNA--EVYESL-----IRAGHFGLVVG 343 (994)
T ss_pred HHHhCccc--CceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC--eEEEEe-----CCCCCEeeeec
Confidence 432 1111 1122221 358999999999999999999999999999999987 54 344 57788888889
Q ss_pred ccchhhHHHHHHHHHhhhcC
Q 007502 580 RMAVEQVYPCIVQFLGRYDS 599 (601)
Q Consensus 580 ~~~pe~v~~~I~eFL~~~~~ 599 (601)
...++++|+.|.+||++++.
T Consensus 344 ~~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 344 SRAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred hhhhhhhChHHHHHHHHhcc
Confidence 99999999999999998874
No 26
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.87 E-value=9.1e-21 Score=189.18 Aligned_cols=196 Identities=18% Similarity=0.289 Sum_probs=109.3
Q ss_pred CCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhH-HHhhccc
Q 007502 354 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKST-LKLLLPL 432 (601)
Q Consensus 354 ~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~-l~~l~~l 432 (601)
+++++++ +|+.++++++. . .+++++||||||.+++.++.++| ++|+++|++++.......... ......+
T Consensus 61 ~~~~~~~-~~~~~~i~~~~----~--~~~~l~G~S~Gg~~a~~~a~~~~--~~v~~~i~~~~~~~~~~~~~~~~~~~~~~ 131 (257)
T TIGR03611 61 YSIAHMA-DDVLQLLDALN----I--ERFHFVGHALGGLIGLQLALRYP--ERLLSLVLINAWSRPDPHTRRCFDVRIAL 131 (257)
T ss_pred CCHHHHH-HHHHHHHHHhC----C--CcEEEEEechhHHHHHHHHHHCh--HHhHHheeecCCCCCChhHHHHHHHHHHH
Confidence 4566776 88888888763 2 38999999999999999999965 899999999876543221110 0000000
Q ss_pred cChhhhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCccc
Q 007502 433 ADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRD 512 (601)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 512 (601)
...... ..+........ +...|+... ....................+......+.
T Consensus 132 ---~~~~~~-----~~~~~~~~~~~----~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 186 (257)
T TIGR03611 132 ---LQHAGP-----EAYVHAQALFL----YPADWISEN-------AARLAADEAHALAHFPGKANVLRRINALE------ 186 (257)
T ss_pred ---HhccCc-----chhhhhhhhhh----ccccHhhcc-------chhhhhhhhhcccccCccHHHHHHHHHHH------
Confidence 000000 00000000000 000011000 00000000000000001111111111111
Q ss_pred CCCccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHH
Q 007502 513 RGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQ 592 (601)
Q Consensus 513 ~~~~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~e 592 (601)
..+....++++++|+|+++|++|.++|++.++++.+.+++. +++.+ ++++|..+.+ .|+++.+.|.+
T Consensus 187 ---~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~~------~~~~~~~~i~~ 253 (257)
T TIGR03611 187 ---AFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNA--QLKLL--PYGGHASNVT------DPETFNRALLD 253 (257)
T ss_pred ---cCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCc--eEEEE--CCCCCCcccc------CHHHHHHHHHH
Confidence 11334567889999999999999999999999999999876 77777 4555555543 88999999999
Q ss_pred HHhh
Q 007502 593 FLGR 596 (601)
Q Consensus 593 FL~~ 596 (601)
||++
T Consensus 254 fl~~ 257 (257)
T TIGR03611 254 FLKT 257 (257)
T ss_pred HhcC
Confidence 9963
No 27
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.87 E-value=7.8e-21 Score=192.08 Aligned_cols=69 Identities=19% Similarity=0.294 Sum_probs=60.1
Q ss_pred ccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 007502 518 FYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 596 (601)
Q Consensus 518 d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~ 596 (601)
++.+.+.+|++|+|+|+|++|.++|.+..+.+.+.+++. +++++ ++++|+.+.+ .|+++++.|.+|-++
T Consensus 187 ~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~--~~~~i--~~~gH~~~~e------~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 187 DLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHS--ESYIF--AKAAHAPFIS------HPAEFCHLLVALKQR 255 (256)
T ss_pred ccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCC--eEEEe--CCCCCCcccc------CHHHHHHHHHHHhcc
Confidence 445678899999999999999999999999999999988 88888 7777888776 899999999998653
No 28
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.87 E-value=1.2e-20 Score=188.61 Aligned_cols=193 Identities=12% Similarity=0.141 Sum_probs=102.5
Q ss_pred chhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccCh
Q 007502 356 FDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADP 435 (601)
Q Consensus 356 ~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~ 435 (601)
+++++ +|+.++++.+ +. ++++++||||||.+++.++.++| +.+|+++|++++............... ..
T Consensus 49 ~~~~~-~~l~~~l~~~----~~--~~~~lvG~S~Gg~va~~~a~~~~-~~~v~~lvl~~~~~~~~~~~~~~~~~~---~~ 117 (242)
T PRK11126 49 FADVS-RLLSQTLQSY----NI--LPYWLVGYSLGGRIAMYYACQGL-AGGLCGLIVEGGNPGLQNAEERQARWQ---ND 117 (242)
T ss_pred HHHHH-HHHHHHHHHc----CC--CCeEEEEECHHHHHHHHHHHhCC-cccccEEEEeCCCCCCCCHHHHHHHHh---hh
Confidence 44666 8888888876 33 38999999999999999999975 345999999887654332211110000 00
Q ss_pred hhhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCC
Q 007502 436 AQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGG 515 (601)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 515 (601)
.. ..... .......+...++...... .........+.... ..........+..... + ..
T Consensus 118 ~~-----------~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~---~~ 176 (242)
T PRK11126 118 RQ-----------WAQRF-RQEPLEQVLADWYQQPVFA--SLNAEQRQQLVAKR-SNNNGAAVAAMLEATS---L---AK 176 (242)
T ss_pred HH-----------HHHHh-ccCcHHHHHHHHHhcchhh--ccCccHHHHHHHhc-ccCCHHHHHHHHHhcC---c---cc
Confidence 00 00000 0000001111111110000 01111111111111 0111112222221110 0 01
Q ss_pred ccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 007502 516 KFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 595 (601)
Q Consensus 516 ~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~ 595 (601)
..+..+.+.++++|+++|+|++|..+. .+.+. .+. +++++ ++++|+.|.+ .|+++.+.|.+||+
T Consensus 177 ~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~-~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~fl~ 240 (242)
T PRK11126 177 QPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ-LAL--PLHVI--PNAGHNAHRE------NPAAFAASLAQILR 240 (242)
T ss_pred CCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH-hcC--eEEEe--CCCCCchhhh------ChHHHHHHHHHHHh
Confidence 223456788999999999999998652 23333 234 78888 6777777775 89999999999997
Q ss_pred h
Q 007502 596 R 596 (601)
Q Consensus 596 ~ 596 (601)
+
T Consensus 241 ~ 241 (242)
T PRK11126 241 L 241 (242)
T ss_pred h
Confidence 5
No 29
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.86 E-value=3.5e-20 Score=188.29 Aligned_cols=65 Identities=28% Similarity=0.499 Sum_probs=55.4
Q ss_pred cccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 007502 521 DHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 595 (601)
Q Consensus 521 ~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~ 595 (601)
..+++|++|+|+|+|++|.++|++..+.+.+.+++. +++++ ++++|+.+.+ .|+++.+.|.+||+
T Consensus 214 ~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~e------~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 214 RDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTA--TLHVV--PGGGHLVHEE------QADGVVGLILQAAE 278 (278)
T ss_pred hhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCC--eEEEE--CCCCCccccc------CHHHHHHHHHHHhC
Confidence 457789999999999999999999999999999876 77777 5566666654 78999999999985
No 30
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.86 E-value=2.4e-20 Score=196.45 Aligned_cols=200 Identities=20% Similarity=0.264 Sum_probs=112.3
Q ss_pred CchhhhhhhHHHHHHHHHHHc-----------------CCC-CCcEEEEEEchhHHHHHHHHHhCCCc------ccccee
Q 007502 355 DFDHYLEEDVPAAMEYIRAQS-----------------KPK-DGKLLAIGHSMGGILLYAMLSRCGRE------SRLAAI 410 (601)
Q Consensus 355 s~~~~a~~Dl~a~Id~L~~~~-----------------g~~-~~kv~LVGHSmGG~IAl~~Aa~~P~~------~~V~~l 410 (601)
+|++++ +|+..+++.++... ..+ ..|++|+||||||.+++.++.+++.. ..++++
T Consensus 100 ~~~~~v-~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~ 178 (332)
T TIGR01607 100 CFDDLV-YDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGC 178 (332)
T ss_pred hHHHHH-HHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccccccceE
Confidence 366776 99999998876520 011 34899999999999999998775411 268999
Q ss_pred EEEccCCCCCCchh----HHHhhccccChhhhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHH
Q 007502 411 VTLASSLDYTSSKS----TLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLV 486 (601)
Q Consensus 411 Vllap~~~~~~~~~----~l~~l~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 486 (601)
|+++|+........ .+... .......+..+.+...... ......++.....+.
T Consensus 179 i~~s~~~~i~~~~~~~~~~~~~~-------------~~~l~~~~~~~~p~~~~~~----------~~~~~~~~~~~~~~~ 235 (332)
T TIGR01607 179 ISLSGMISIKSVGSDDSFKFKYF-------------YLPVMNFMSRVFPTFRISK----------KIRYEKSPYVNDIIK 235 (332)
T ss_pred EEeccceEEecccCCCcchhhhh-------------HHHHHHHHHHHCCcccccC----------ccccccChhhhhHHh
Confidence 99998764321000 00000 0000011111111111000 000001122222222
Q ss_pred HhhcCC---CcHHHHHHHHHHHHcCCcccCCCccccccccCCC--CCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEE
Q 007502 487 LNNFCT---IPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKC--NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYK 561 (601)
Q Consensus 487 ~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~L~~I--~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~ 561 (601)
.+.... .....+..+..... .....+.++ ++|+|+|+|++|.+++++.++.+++.+...+++++
T Consensus 236 ~Dp~~~~~~~s~~~~~~l~~~~~-----------~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~ 304 (332)
T TIGR01607 236 FDKFRYDGGITFNLASELIKATD-----------TLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELH 304 (332)
T ss_pred cCccccCCcccHHHHHHHHHHHH-----------HHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEE
Confidence 222211 12223333332221 112234555 79999999999999999999999988765556888
Q ss_pred EecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 007502 562 VFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 596 (601)
Q Consensus 562 vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~ 596 (601)
++ +++.|..+.+ ..++++.+.|.+||+.
T Consensus 305 ~~--~g~~H~i~~E-----~~~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 305 TL--EDMDHVITIE-----PGNEEVLKKIIEWISN 332 (332)
T ss_pred EE--CCCCCCCccC-----CCHHHHHHHHHHHhhC
Confidence 88 5556666554 2468999999999963
No 31
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.86 E-value=1.7e-20 Score=185.14 Aligned_cols=67 Identities=21% Similarity=0.344 Sum_probs=56.5
Q ss_pred ccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHH
Q 007502 518 FYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 594 (601)
Q Consensus 518 d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL 594 (601)
+....+.+|++|+|+|+|++|.++|++..+.+.+.+++. +++++ ++++|+.+.+ .|+++.+.|.+|+
T Consensus 179 ~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~e------~p~~~~~~i~~fi 245 (245)
T TIGR01738 179 DLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHS--ELYIF--AKAAHAPFLS------HAEAFCALLVAFK 245 (245)
T ss_pred cHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCC--eEEEe--CCCCCCcccc------CHHHHHHHHHhhC
Confidence 344567899999999999999999999999999999876 78887 5566666654 8999999999996
No 32
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.86 E-value=2.6e-20 Score=177.06 Aligned_cols=181 Identities=18% Similarity=0.222 Sum_probs=128.3
Q ss_pred CCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhcccc
Q 007502 354 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLA 433 (601)
Q Consensus 354 ~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~ 433 (601)
.+.++|. +|+....++|... |++ .|.++|-||||.+++.+|.++| ++++|.+|++....+....+..+
T Consensus 63 t~~~DW~-~~v~d~Y~~L~~~-gy~--eI~v~GlSmGGv~alkla~~~p----~K~iv~m~a~~~~k~~~~iie~~---- 130 (243)
T COG1647 63 TTPRDWW-EDVEDGYRDLKEA-GYD--EIAVVGLSMGGVFALKLAYHYP----PKKIVPMCAPVNVKSWRIIIEGL---- 130 (243)
T ss_pred CCHHHHH-HHHHHHHHHHHHc-CCC--eEEEEeecchhHHHHHHHhhCC----ccceeeecCCcccccchhhhHHH----
Confidence 4566886 9999999999865 454 8999999999999999999965 89999999987654432111111
Q ss_pred ChhhhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccC
Q 007502 434 DPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDR 513 (601)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 513 (601)
..+.. ........+.+.+.+.+... ...+.....++...+.
T Consensus 131 ------------------------------l~y~~-~~kk~e~k~~e~~~~e~~~~-~~~~~~~~~~~~~~i~------- 171 (243)
T COG1647 131 ------------------------------LEYFR-NAKKYEGKDQEQIDKEMKSY-KDTPMTTTAQLKKLIK------- 171 (243)
T ss_pred ------------------------------HHHHH-HhhhccCCCHHHHHHHHHHh-hcchHHHHHHHHHHHH-------
Confidence 11111 11111233555555544332 2334455555555444
Q ss_pred CCccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHH
Q 007502 514 GGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQF 593 (601)
Q Consensus 514 ~~~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eF 593 (601)
+....+..|..|++++.|++|++||.+.+..+++.+...++++.++ .+.+|. |....+.+.+.+.|+.|
T Consensus 172 ----~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~-----e~SgHV--It~D~Erd~v~e~V~~F 240 (243)
T COG1647 172 ----DARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWL-----EGSGHV--ITLDKERDQVEEDVITF 240 (243)
T ss_pred ----HHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEE-----ccCCce--eecchhHHHHHHHHHHH
Confidence 3346788999999999999999999999999999998888999999 555664 33346789999999999
Q ss_pred Hhh
Q 007502 594 LGR 596 (601)
Q Consensus 594 L~~ 596 (601)
|+.
T Consensus 241 L~~ 243 (243)
T COG1647 241 LEK 243 (243)
T ss_pred hhC
Confidence 974
No 33
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.86 E-value=6e-20 Score=196.12 Aligned_cols=202 Identities=13% Similarity=0.111 Sum_probs=111.2
Q ss_pred CCCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCc--hhHHHhhc
Q 007502 353 DWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSS--KSTLKLLL 430 (601)
Q Consensus 353 d~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~--~~~l~~l~ 430 (601)
+|++++++ +|+.++++.+.. ++++|+||||||++++.++.++| ++|+++|+++++...... ...+..+.
T Consensus 177 ~ys~~~~a-~~l~~~i~~l~~------~~~~LvG~s~GG~ia~~~a~~~P--~~v~~lILi~~~~~~~~~~~p~~l~~~~ 247 (383)
T PLN03084 177 NYTLDEYV-SSLESLIDELKS------DKVSLVVQGYFSPPVVKYASAHP--DKIKKLILLNPPLTKEHAKLPSTLSEFS 247 (383)
T ss_pred cCCHHHHH-HHHHHHHHHhCC------CCceEEEECHHHHHHHHHHHhCh--HhhcEEEEECCCCccccccchHHHHHHH
Confidence 46777887 999999988832 28999999999999999999966 999999999987532110 11111000
Q ss_pred cccChhhhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCc-HHHHHHHHHHHHcCC
Q 007502 431 PLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIP-AKLILQLTTAFREGG 509 (601)
Q Consensus 431 ~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~ 509 (601)
. . +...++.... ......++.. ........+....+......... ...+..+.+.+...
T Consensus 248 ~---~-------------l~~~~~~~~~-~~~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~- 307 (383)
T PLN03084 248 N---F-------------LLGEIFSQDP-LRASDKALTS--CGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKE- 307 (383)
T ss_pred H---H-------------Hhhhhhhcch-HHHHhhhhcc--cCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcc-
Confidence 0 0 0000000000 0000000000 00001111211111111100000 11111122222110
Q ss_pred cccCCCccccccc--cCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHH
Q 007502 510 LRDRGGKFFYKDH--IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVY 587 (601)
Q Consensus 510 ~~~~~~~~d~~~~--L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~ 587 (601)
..... .+.... ..+|++|+|+|+|++|.+++.+..+++.+. .+. +++++ ++++|+.|.| .|+++.
T Consensus 308 l~~~~--~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~-~~a--~l~vI--p~aGH~~~~E------~Pe~v~ 374 (383)
T PLN03084 308 LKKYI--EEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKS-SQH--KLIEL--PMAGHHVQED------CGEELG 374 (383)
T ss_pred cchhh--HHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHh-cCC--eEEEE--CCCCCCcchh------CHHHHH
Confidence 00000 001111 146899999999999999999988888887 444 78877 7778888876 899999
Q ss_pred HHHHHHHhh
Q 007502 588 PCIVQFLGR 596 (601)
Q Consensus 588 ~~I~eFL~~ 596 (601)
+.|.+||.+
T Consensus 375 ~~I~~Fl~~ 383 (383)
T PLN03084 375 GIISGILSK 383 (383)
T ss_pred HHHHHHhhC
Confidence 999999863
No 34
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.86 E-value=3.1e-20 Score=183.05 Aligned_cols=65 Identities=25% Similarity=0.390 Sum_probs=51.7
Q ss_pred ccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 007502 520 KDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 595 (601)
Q Consensus 520 ~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~ 595 (601)
...+.++++|+++|+|++|..++ +..+.+.+.+++. +++++ ++++|+.+.+ .++++.+.|.+||+
T Consensus 187 ~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~--~~~~~--~~~gH~~~~e------~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 187 WPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPNL--TLVII--ANAGHNIHLE------NPEAFAKILLAFLE 251 (251)
T ss_pred HHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCCC--cEEEE--cCCCCCcCcc------ChHHHHHHHHHHhC
Confidence 34577899999999999998774 5667788887766 77777 5666766665 78999999999984
No 35
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.85 E-value=4.8e-20 Score=186.33 Aligned_cols=217 Identities=18% Similarity=0.206 Sum_probs=115.8
Q ss_pred CCCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccc
Q 007502 353 DWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPL 432 (601)
Q Consensus 353 d~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l 432 (601)
+|+++..+ .|+..+++.+.. ++++++||+||+++|+.+|..+| ++|+++|+++.+.. .+...+.......
T Consensus 93 ~Yt~~~l~-~di~~lld~Lg~------~k~~lvgHDwGaivaw~la~~~P--erv~~lv~~nv~~~-~p~~~~~~~~~~~ 162 (322)
T KOG4178|consen 93 EYTIDELV-GDIVALLDHLGL------KKAFLVGHDWGAIVAWRLALFYP--ERVDGLVTLNVPFP-NPKLKPLDSSKAI 162 (322)
T ss_pred eeeHHHHH-HHHHHHHHHhcc------ceeEEEeccchhHHHHHHHHhCh--hhcceEEEecCCCC-Ccccchhhhhccc
Confidence 47788887 999999999942 39999999999999999999976 99999999987654 2222222111100
Q ss_pred -cChhhhc--CCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCC
Q 007502 433 -ADPAQAL--NVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGG 509 (601)
Q Consensus 433 -~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 509 (601)
...+... -.+..+... ++.. ........+...-.......+. ......+-...+.+..+...+..+.
T Consensus 163 f~~~~y~~~fQ~~~~~E~~-~s~~----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~w~t~edi~~~~~~f~~~g 232 (322)
T KOG4178|consen 163 FGKSYYICLFQEPGKPETE-LSKD----DTEMLVKTFRTRKTPGPLIVPK-----QPNENPLWLTEEDIAFYVSKFQIDG 232 (322)
T ss_pred cCccceeEeccccCcchhh-hccc----hhHHhHHhhhccccCCccccCC-----CCCCccchhhHHHHHHHHhcccccc
Confidence 0000000 000000000 0000 0000000001000000000000 0000000001122222222232233
Q ss_pred cccCCCccc--------cccccCCCCCCEEEEEeCCCCCCCHH-HHHHHHHHCCCCceEEEEecCCCCCCCCcccccccc
Q 007502 510 LRDRGGKFF--------YKDHIHKCNIPILAIAGDQDLICPPE-AVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGR 580 (601)
Q Consensus 510 ~~~~~~~~d--------~~~~L~~I~vPVLII~Ge~D~iVp~e-~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~ 580 (601)
|+.+-+.+. ..-.+.+|++|+++|+|+.|.+.+.. ....+.+.++... +.+++ ++++|+.+.|
T Consensus 233 ~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~-~~vv~--~~~gH~vqqe----- 304 (322)
T KOG4178|consen 233 FTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLT-ERVVI--EGIGHFVQQE----- 304 (322)
T ss_pred ccccchhhHHHhhCchhccccccccccceEEEEecCcccccchhHHHHHHHhhcccc-ceEEe--cCCccccccc-----
Confidence 332221111 12246788999999999999998776 4555666777643 34445 6788888876
Q ss_pred cchhhHHHHHHHHHhhhc
Q 007502 581 MAVEQVYPCIVQFLGRYD 598 (601)
Q Consensus 581 ~~pe~v~~~I~eFL~~~~ 598 (601)
.|+++++.|++||++.+
T Consensus 305 -~p~~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 305 -KPQEVNQAILGFINSFS 321 (322)
T ss_pred -CHHHHHHHHHHHHHhhc
Confidence 99999999999999764
No 36
>PRK07581 hypothetical protein; Validated
Probab=99.85 E-value=4.8e-20 Score=194.60 Aligned_cols=221 Identities=17% Similarity=0.169 Sum_probs=114.2
Q ss_pred hhHHHHHHHHHHHcCCCCCc-EEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHH-Hhhc-cccC-hhh
Q 007502 362 EDVPAAMEYIRAQSKPKDGK-LLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTL-KLLL-PLAD-PAQ 437 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~k-v~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l-~~l~-~l~~-~~~ 437 (601)
+|+.+....+.+..|++ + ++||||||||++|+.+|.+|| ++|+++|++++........... .... .+.. ...
T Consensus 107 ~~~~~~~~~l~~~lgi~--~~~~lvG~S~GG~va~~~a~~~P--~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~ 182 (339)
T PRK07581 107 DNVRAQHRLLTEKFGIE--RLALVVGWSMGAQQTYHWAVRYP--DMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAF 182 (339)
T ss_pred HHHHHHHHHHHHHhCCC--ceEEEEEeCHHHHHHHHHHHHCH--HHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCC
Confidence 77776555555555664 7 579999999999999999976 9999999998765432211100 0000 0000 000
Q ss_pred hcC-CCccchHHHHHHhcCCCCCchhHHHHHhhh-ccccccCC-HHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCC
Q 007502 438 ALN-VPVVPLGALLTAAYPLSSSPPYVFSWLNNL-ISAEDMMH-PELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRG 514 (601)
Q Consensus 438 ~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 514 (601)
..+ ....+...+ ...........+...++... ........ .+.+...............+......+....+....
T Consensus 183 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 261 (339)
T PRK07581 183 NGGWYAEPPERGL-RAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNP 261 (339)
T ss_pred CCCCCCCcHHHHH-HHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCc
Confidence 000 000000000 00000000000000111100 00000001 122222222221111222233322222211111000
Q ss_pred C-ccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCC-CCCCCcccccccccchhhHHHHHHH
Q 007502 515 G-KFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPS-GPHYAHYDLVGGRMAVEQVYPCIVQ 592 (601)
Q Consensus 515 ~-~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~-~~h~gH~dfi~g~~~pe~v~~~I~e 592 (601)
. ..++.+.+++|++|||+|+|++|.++|++..+.+.+.+++. +++++ ++ ++|..+.+ .++++.+.|.+
T Consensus 262 ~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a--~l~~i--~~~~GH~~~~~------~~~~~~~~~~~ 331 (339)
T PRK07581 262 AYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNA--ELRPI--ESIWGHLAGFG------QNPADIAFIDA 331 (339)
T ss_pred ccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC--eEEEe--CCCCCcccccc------CcHHHHHHHHH
Confidence 0 12456678899999999999999999999999999999987 88887 44 45555553 78999999999
Q ss_pred HHhhh
Q 007502 593 FLGRY 597 (601)
Q Consensus 593 FL~~~ 597 (601)
||++.
T Consensus 332 ~~~~~ 336 (339)
T PRK07581 332 ALKEL 336 (339)
T ss_pred HHHHH
Confidence 99875
No 37
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.85 E-value=7.7e-20 Score=198.97 Aligned_cols=201 Identities=19% Similarity=0.265 Sum_probs=127.3
Q ss_pred CCCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHH----HHHhCCCccccceeEEEccCCCCCCchhHHHh
Q 007502 353 DWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYA----MLSRCGRESRLAAIVTLASSLDYTSSKSTLKL 428 (601)
Q Consensus 353 d~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~----~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~ 428 (601)
++++++|+ +.+.++|+.++..+|.+ +++++||||||.+++. ++++++ +.+|++++++.+++++..... +..
T Consensus 264 ~~~ldDYv-~~i~~Ald~V~~~tG~~--~vnl~GyC~GGtl~a~~~a~~aA~~~-~~~V~sltllatplDf~~~g~-l~~ 338 (560)
T TIGR01839 264 EWGLSTYV-DALKEAVDAVRAITGSR--DLNLLGACAGGLTCAALVGHLQALGQ-LRKVNSLTYLVSLLDSTMESP-AAL 338 (560)
T ss_pred CCCHHHHH-HHHHHHHHHHHHhcCCC--CeeEEEECcchHHHHHHHHHHHhcCC-CCceeeEEeeecccccCCCCc-chh
Confidence 36788998 79999999999998865 8999999999999997 777754 348999999999999875321 111
Q ss_pred hccccCh---hhhcCCCccchHHHHHHhcCCCCCchhHHH-HHhhh-ccccccCCHHHHHHHHHhhcCCCcHHHHHHHHH
Q 007502 429 LLPLADP---AQALNVPVVPLGALLTAAYPLSSSPPYVFS-WLNNL-ISAEDMMHPELLKKLVLNNFCTIPAKLILQLTT 503 (601)
Q Consensus 429 l~~l~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 503 (601)
+...... .......+...+..+...+.+.+....+.. ++... ..... ....+. .........|.....++..
T Consensus 339 f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p--~~fdll-~Wn~D~t~lPg~~~~e~l~ 415 (560)
T TIGR01839 339 FADEQTLEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEP--PAFDIL-YWNNDTTRLPAAFHGDLLD 415 (560)
T ss_pred ccChHHHHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCc--chhhHH-HHhCcCccchHHHHHHHHH
Confidence 1100000 001111122234444444444433322222 22222 11111 111122 3334445678888888887
Q ss_pred HHHcCCcccCCCccc---cccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEe
Q 007502 504 AFREGGLRDRGGKFF---YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVF 563 (601)
Q Consensus 504 ~~~~~~~~~~~~~~d---~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi 563 (601)
.+..+.+... +.+. -.-++++|+||++++.|++|.|+|++.+..+.+.+.+ +++++..
T Consensus 416 ly~~N~L~~p-G~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs-~~~fvl~ 476 (560)
T TIGR01839 416 MFKSNPLTRP-DALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGG-KRRFVLS 476 (560)
T ss_pred HHhcCCCCCC-CCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCC-CeEEEec
Confidence 7766655431 1111 1237899999999999999999999999999999886 5777764
No 38
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.85 E-value=8.2e-21 Score=184.41 Aligned_cols=179 Identities=20% Similarity=0.357 Sum_probs=102.4
Q ss_pred CCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCch--hHHHhhcc
Q 007502 354 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSK--STLKLLLP 431 (601)
Q Consensus 354 ~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~--~~l~~l~~ 431 (601)
+++++++ +|+.++++.+.. ++++++||||||.+++.++.++| ++|+++|++++........ ....
T Consensus 47 ~~~~~~~-~~l~~~l~~~~~------~~~~lvG~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~~~~~~~~~~~~---- 113 (228)
T PF12697_consen 47 YSIEDYA-EDLAELLDALGI------KKVILVGHSMGGMIALRLAARYP--DRVKGLVLLSPPPPLPDSPSRSFGP---- 113 (228)
T ss_dssp GSHHHHH-HHHHHHHHHTTT------SSEEEEEETHHHHHHHHHHHHSG--GGEEEEEEESESSSHHHHHCHHHHH----
T ss_pred cchhhhh-hhhhhccccccc------ccccccccccccccccccccccc--cccccceeecccccccccccccccc----
Confidence 3456676 888888877743 38999999999999999999965 8999999999986542211 0000
Q ss_pred ccChhhhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcc
Q 007502 432 LADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLR 511 (601)
Q Consensus 432 l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 511 (601)
.++..+..... .....+....+.. ............. ....+..+.....
T Consensus 114 ----------------~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~~~~~~~----- 163 (228)
T PF12697_consen 114 ----------------SFIRRLLAWRS--RSLRRLASRFFYR--WFDGDEPEDLIRS-----SRRALAEYLRSNL----- 163 (228)
T ss_dssp ----------------HHHHHHHHHHH--HHHHHHHHHHHHH--HHTHHHHHHHHHH-----HHHHHHHHHHHHH-----
T ss_pred ----------------hhhhhhhhccc--ccccccccccccc--ccccccccccccc-----ccccccccccccc-----
Confidence 00000000000 0000000000000 0011111111111 1111222221100
Q ss_pred cCCCccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHH
Q 007502 512 DRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYP 588 (601)
Q Consensus 512 ~~~~~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~ 588 (601)
...++...++++++|+++++|++|.+++.+..+++.+.+++. +++++ ++++|+.+.+ .|+++.+
T Consensus 164 ---~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~~------~p~~~~~ 227 (228)
T PF12697_consen 164 ---WQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNA--ELVVI--PGAGHFLFLE------QPDEVAE 227 (228)
T ss_dssp ---HHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTE--EEEEE--TTSSSTHHHH------SHHHHHH
T ss_pred ---ccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCC--EEEEE--CCCCCccHHH------CHHHHhc
Confidence 011334567888999999999999999999999999998865 88888 4555555543 7777765
No 39
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.85 E-value=5.3e-20 Score=194.78 Aligned_cols=67 Identities=18% Similarity=0.255 Sum_probs=55.8
Q ss_pred ccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHC-CCCceEEEEecCCC-CCCCCcccccccccchhhHHHHHHHHHhhhc
Q 007502 522 HIHKCNIPILAIAGDQDLICPPEAVEETVKLL-PEDLVTYKVFGEPS-GPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 598 (601)
Q Consensus 522 ~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~l-p~~~~~l~vi~~~~-~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~~ 598 (601)
.+.+|++|+|+|+|++|.++|++..+++.+.+ ++. +++++ ++ ++|..++| .|+++++.|.+||++..
T Consensus 272 ~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a--~l~~i--~~~aGH~~~lE------~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 272 DPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRG--SLRVL--RSPYGHDAFLK------ETDRIDAILTTALRSTG 340 (343)
T ss_pred ChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCC--eEEEE--eCCccHHHHhc------CHHHHHHHHHHHHHhcc
Confidence 46789999999999999999999999999988 566 77777 42 55555554 89999999999998764
No 40
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.84 E-value=1.9e-19 Score=182.30 Aligned_cols=67 Identities=25% Similarity=0.481 Sum_probs=53.9
Q ss_pred ccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 007502 518 FYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 595 (601)
Q Consensus 518 d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~ 595 (601)
+....+.++++|+|+++|++|.+ +++..+.+.+.+++. +++++ ++++|+.+.+ .|+++.+.|.+||+
T Consensus 222 ~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~e------~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 222 DITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGS--RLVVF--PDGSHMTMIE------DPEVYFKLLSDFIR 288 (288)
T ss_pred CHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhccCC--eEEEe--CCCCCCcccC------CHHHHHHHHHHHhC
Confidence 33456788999999999999985 567888899988876 77777 5566666654 88999999999985
No 41
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.84 E-value=9.6e-20 Score=187.92 Aligned_cols=58 Identities=19% Similarity=0.395 Sum_probs=50.6
Q ss_pred CCCEEEEEeCCCCCCCHH-HHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHH
Q 007502 527 NIPILAIAGDQDLICPPE-AVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 594 (601)
Q Consensus 527 ~vPVLII~Ge~D~iVp~e-~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL 594 (601)
++|+|+|+|++|.++++. ..+.+.+.+++. +++++ ++++|+.|.+ .|+++++.|.+||
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~--~~~~i--~~aGH~~~~e------~Pe~~~~~i~~~~ 285 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATFPDH--VLVEL--PNAKHFIQED------APDRIAAAIIERF 285 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhcCCC--eEEEc--CCCccccccc------CHHHHHHHHHHhc
Confidence 899999999999988655 578899999987 88888 6777887776 8999999999997
No 42
>PLN02511 hydrolase
Probab=99.83 E-value=1.3e-19 Score=194.70 Aligned_cols=198 Identities=20% Similarity=0.265 Sum_probs=105.5
Q ss_pred hhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccc--cceeEEEccCCCCCCchhHHHhhccccCh
Q 007502 358 HYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESR--LAAIVTLASSLDYTSSKSTLKLLLPLADP 435 (601)
Q Consensus 358 ~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~--V~~lVllap~~~~~~~~~~l~~l~~l~~~ 435 (601)
.+. +|+.+++++++.+++. .+++++||||||++++.++.++| ++ |.++++++++.+.......+... +..
T Consensus 154 ~~~-~Dl~~~i~~l~~~~~~--~~~~lvG~SlGg~i~~~yl~~~~--~~~~v~~~v~is~p~~l~~~~~~~~~~--~~~- 225 (388)
T PLN02511 154 SFT-GDLRQVVDHVAGRYPS--ANLYAAGWSLGANILVNYLGEEG--ENCPLSGAVSLCNPFDLVIADEDFHKG--FNN- 225 (388)
T ss_pred Cch-HHHHHHHHHHHHHCCC--CCEEEEEechhHHHHHHHHHhcC--CCCCceEEEEECCCcCHHHHHHHHhcc--HHH-
Confidence 344 9999999999987543 48999999999999999999976 44 89999988776531111000000 000
Q ss_pred hhhcCCCccchHH-HHHHhcCCCCCchhHHHHHhhhccc-cccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccC
Q 007502 436 AQALNVPVVPLGA-LLTAAYPLSSSPPYVFSWLNNLISA-EDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDR 513 (601)
Q Consensus 436 ~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 513 (601)
.... +...+. ...... ...+.. ....+...+.. ...+.++.+.+.. ....+
T Consensus 226 ---------~y~~~~~~~l~------~~~~~~-~~~~~~~~~~~~~~~~~~----------~~~~~~fd~~~t~-~~~gf 278 (388)
T PLN02511 226 ---------VYDKALAKALR------KIFAKH-ALLFEGLGGEYNIPLVAN----------AKTVRDFDDGLTR-VSFGF 278 (388)
T ss_pred ---------HHHHHHHHHHH------HHHHHH-HHHHhhCCCccCHHHHHh----------CCCHHHHHHhhhh-hcCCC
Confidence 0000 000000 000000 000000 00000000000 0011111111110 01111
Q ss_pred CCcc------ccccccCCCCCCEEEEEeCCCCCCCHHHH-HHHHHHCCCCceEEEEecCCCCCCCCcccccccccc---h
Q 007502 514 GGKF------FYKDHIHKCNIPILAIAGDQDLICPPEAV-EETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMA---V 583 (601)
Q Consensus 514 ~~~~------d~~~~L~~I~vPVLII~Ge~D~iVp~e~~-~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~---p 583 (601)
.... +....+++|++|+|+|+|++|+++|.+.. ..+.+.+++. +++++ ++++|+.|++..+. .
T Consensus 279 ~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~--~l~~~-----~~gGH~~~~E~p~~~~~~ 351 (388)
T PLN02511 279 KSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNC--LLIVT-----PSGGHLGWVAGPEAPFGA 351 (388)
T ss_pred CCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCE--EEEEC-----CCcceeccccCCCCCCCC
Confidence 1111 22457889999999999999999998765 4566777765 78877 45555555543221 1
Q ss_pred hhHHHHHHHHHhhh
Q 007502 584 EQVYPCIVQFLGRY 597 (601)
Q Consensus 584 e~v~~~I~eFL~~~ 597 (601)
.++.+.|.+||+..
T Consensus 352 ~w~~~~i~~Fl~~~ 365 (388)
T PLN02511 352 PWTDPVVMEFLEAL 365 (388)
T ss_pred ccHHHHHHHHHHHH
Confidence 35789999999764
No 43
>PRK10985 putative hydrolase; Provisional
Probab=99.83 E-value=2.8e-19 Score=187.80 Aligned_cols=199 Identities=17% Similarity=0.201 Sum_probs=107.7
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccChhhhcCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 441 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~~~~~g~ 441 (601)
+|+..++++++.+.+. .+++++||||||.+++.++++++....+.++|+++++.+.......+.... ...+
T Consensus 115 ~D~~~~i~~l~~~~~~--~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~--~~~~----- 185 (324)
T PRK10985 115 EDARFFLRWLQREFGH--VPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGF--SRVY----- 185 (324)
T ss_pred HHHHHHHHHHHHhCCC--CCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhH--HHHH-----
Confidence 8999999999887654 389999999999999988888651224899999998765432211110000 0000
Q ss_pred CccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCcc----
Q 007502 442 PVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKF---- 517 (601)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---- 517 (601)
..++.... .......+...... ...+.+.+... ..+.++-+.+. ..+..+....
T Consensus 186 -----~~~l~~~l-----~~~~~~~~~~~~~~-~~~~~~~~~~~----------~~~~~fd~~~~-~~~~g~~~~~~~y~ 243 (324)
T PRK10985 186 -----QRYLLNLL-----KANAARKLAAYPGT-LPINLAQLKSV----------RRLREFDDLIT-ARIHGFADAIDYYR 243 (324)
T ss_pred -----HHHHHHHH-----HHHHHHHHHhcccc-ccCCHHHHhcC----------CcHHHHhhhhe-eccCCCCCHHHHHH
Confidence 00000000 00000000000000 00011111000 00111111111 0111111111
Q ss_pred --ccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccc--cchhhHHHHHHHH
Q 007502 518 --FYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGR--MAVEQVYPCIVQF 593 (601)
Q Consensus 518 --d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~--~~pe~v~~~I~eF 593 (601)
+..+.+++|++|+|+|+|++|++++++....+.+..++. ++.++ .+.+|+.++.+. ....+..+.+.+|
T Consensus 244 ~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~--~~~~~-----~~~GH~~~~~g~~~~~~~w~~~~~~~~ 316 (324)
T PRK10985 244 QCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNV--EYQLT-----EHGGHVGFVGGTLLKPQMWLEQRIPDW 316 (324)
T ss_pred HCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCe--EEEEC-----CCCCceeeCCCCCCCCCccHHHHHHHH
Confidence 223567899999999999999999998888887776654 66766 455666666553 2336888899999
Q ss_pred Hhhhc
Q 007502 594 LGRYD 598 (601)
Q Consensus 594 L~~~~ 598 (601)
++...
T Consensus 317 ~~~~~ 321 (324)
T PRK10985 317 LTTYL 321 (324)
T ss_pred HHHhh
Confidence 97654
No 44
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.83 E-value=3.2e-19 Score=182.86 Aligned_cols=63 Identities=14% Similarity=0.227 Sum_probs=52.2
Q ss_pred cCCC-CCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 007502 523 IHKC-NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 596 (601)
Q Consensus 523 L~~I-~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~ 596 (601)
..++ ++|+++|+|++|.++|++..+.+.+.++.. +++.+ .++|..+++ .|+++.+.|.++...
T Consensus 206 ~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~--~~~~l---~~gH~p~ls------~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 206 TGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPS--QVYEL---ESDHSPFFS------TPFLLFGLLIKAAAS 269 (273)
T ss_pred ccccCccceEEEEeCCCCCCCHHHHHHHHHhCCcc--EEEEE---CCCCCcccc------CHHHHHHHHHHHHHH
Confidence 4455 799999999999999999999999999876 77777 356666664 899999999988654
No 45
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.82 E-value=2.9e-19 Score=189.69 Aligned_cols=70 Identities=23% Similarity=0.282 Sum_probs=55.9
Q ss_pred ccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEE--E-EecCCCCCCCCcccccccccchhhHHHHHHHHH
Q 007502 518 FYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTY--K-VFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 594 (601)
Q Consensus 518 d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l--~-vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL 594 (601)
++.+.+++|++|+|+|+|++|.++|++.++.+.+.+++....+ + ++ ++++|..|.+ .|+++.+.|.+||
T Consensus 279 ~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~--~~~GH~~~le------~p~~~~~~l~~FL 350 (351)
T TIGR01392 279 SLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIE--SPYGHDAFLV------ETDQVEELIRGFL 350 (351)
T ss_pred CHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeC--CCCCcchhhc------CHHHHHHHHHHHh
Confidence 3457889999999999999999999999999999999873222 1 33 3455555554 8999999999998
Q ss_pred h
Q 007502 595 G 595 (601)
Q Consensus 595 ~ 595 (601)
+
T Consensus 351 ~ 351 (351)
T TIGR01392 351 R 351 (351)
T ss_pred C
Confidence 4
No 46
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.82 E-value=1.6e-18 Score=184.70 Aligned_cols=192 Identities=20% Similarity=0.277 Sum_probs=103.7
Q ss_pred chhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccCh
Q 007502 356 FDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADP 435 (601)
Q Consensus 356 ~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~ 435 (601)
+++++ +++.++++.+ +. .+++|+||||||.+++.+|.++| .+++++|++++...........
T Consensus 180 ~~~~~-~~~~~~~~~~----~~--~~~~lvG~S~Gg~~a~~~a~~~~--~~v~~lv~~~~~~~~~~~~~~~--------- 241 (371)
T PRK14875 180 LDELA-AAVLAFLDAL----GI--ERAHLVGHSMGGAVALRLAARAP--QRVASLTLIAPAGLGPEINGDY--------- 241 (371)
T ss_pred HHHHH-HHHHHHHHhc----CC--ccEEEEeechHHHHHHHHHHhCc--hheeEEEEECcCCcCcccchhH---------
Confidence 33444 6666665544 33 38999999999999999999955 8999999998764322111000
Q ss_pred hhhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCC
Q 007502 436 AQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGG 515 (601)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 515 (601)
...+.. ......+..++..............................+..+..... .....
T Consensus 242 --------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 302 (371)
T PRK14875 242 --------------IDGFVA-AESRRELKPVLELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALF----AGGRQ 302 (371)
T ss_pred --------------HHHhhc-ccchhHHHHHHHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhc----cCccc
Confidence 000000 00000111122221111111122222222111110111111111111111 11111
Q ss_pred ccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 007502 516 KFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 595 (601)
Q Consensus 516 ~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~ 595 (601)
..++...+.++++|+|+++|++|.++|++..+.+. ++ .++.++ ++++|..+.+ .|+++.+.|.+||+
T Consensus 303 ~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~---~~--~~~~~~--~~~gH~~~~e------~p~~~~~~i~~fl~ 369 (371)
T PRK14875 303 RVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLP---DG--VAVHVL--PGAGHMPQME------AAADVNRLLAEFLG 369 (371)
T ss_pred chhHHHHHhcCCCCEEEEEECCCCccCHHHHhhcc---CC--CeEEEe--CCCCCChhhh------CHHHHHHHHHHHhc
Confidence 23445567889999999999999999988765543 22 367777 5566666654 88999999999997
Q ss_pred hh
Q 007502 596 RY 597 (601)
Q Consensus 596 ~~ 597 (601)
++
T Consensus 370 ~~ 371 (371)
T PRK14875 370 KA 371 (371)
T ss_pred cC
Confidence 63
No 47
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.81 E-value=2.3e-18 Score=179.37 Aligned_cols=64 Identities=31% Similarity=0.412 Sum_probs=48.5
Q ss_pred ccccCCC-CCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 007502 520 KDHIHKC-NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 596 (601)
Q Consensus 520 ~~~L~~I-~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~ 596 (601)
...+.++ ++|+|+|+|++|.++|.+.++++++.+++. +++++ ++++|..+. +...+.|.+|+..
T Consensus 240 ~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~---------~~~~~~i~~~~~~ 304 (306)
T TIGR01249 240 LDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPEA--ELKVT--NNAGHSAFD---------PNNLAALVHALET 304 (306)
T ss_pred HHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCCC--EEEEE--CCCCCCCCC---------hHHHHHHHHHHHH
Confidence 4466777 599999999999999999999999999976 78877 445555443 3455666666654
No 48
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.81 E-value=2.2e-18 Score=174.76 Aligned_cols=215 Identities=19% Similarity=0.240 Sum_probs=113.0
Q ss_pred hHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccChhhhcCCC
Q 007502 363 DVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVP 442 (601)
Q Consensus 363 Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~~~~~g~~ 442 (601)
.+.+-|+..+...|+. |.+|+||||||.++..||.+|| ++|++||+++|...............+...++......
T Consensus 145 ~fvesiE~WR~~~~L~--KmilvGHSfGGYLaa~YAlKyP--erV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~ 220 (365)
T KOG4409|consen 145 EFVESIEQWRKKMGLE--KMILVGHSFGGYLAAKYALKYP--ERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLV 220 (365)
T ss_pred HHHHHHHHHHHHcCCc--ceeEeeccchHHHHHHHHHhCh--HhhceEEEecccccccCCCcchhhcCCChHHHhhhhhh
Confidence 3445556666666775 9999999999999999999977 99999999998765543311111111111111111100
Q ss_pred ccchH--HHHHHhcCCCCCchhHHHHHhhhccc-cccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCcccc
Q 007502 443 VVPLG--ALLTAAYPLSSSPPYVFSWLNNLISA-EDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFY 519 (601)
Q Consensus 443 ~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~ 519 (601)
...+. ..+...-++. +..+.++....+.. ......+.+.+++.......+. .-..+..++..+.+.. ...
T Consensus 221 ~~~~nPl~~LR~~Gp~G--p~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~ps-gE~~fk~l~~~~g~Ar----~Pm 293 (365)
T KOG4409|consen 221 ATNFNPLALLRLMGPLG--PKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPS-GETAFKNLFEPGGWAR----RPM 293 (365)
T ss_pred hhcCCHHHHHHhccccc--hHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCc-HHHHHHHHHhccchhh----hhH
Confidence 00000 0011111111 01122222221111 1122333333333322222221 1111111222221111 112
Q ss_pred ccccCCCC--CCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 007502 520 KDHIHKCN--IPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 597 (601)
Q Consensus 520 ~~~L~~I~--vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~ 597 (601)
.+.+..++ ||+++|+|++|-+ +.....++.+.+....++++++ ++++|....| +|+.+++.|++++++.
T Consensus 294 ~~r~~~l~~~~pv~fiyG~~dWm-D~~~g~~~~~~~~~~~~~~~~v--~~aGHhvylD------np~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 294 IQRLRELKKDVPVTFIYGDRDWM-DKNAGLEVTKSLMKEYVEIIIV--PGAGHHVYLD------NPEFFNQIVLEECDKV 364 (365)
T ss_pred HHHHHhhccCCCEEEEecCcccc-cchhHHHHHHHhhcccceEEEe--cCCCceeecC------CHHHHHHHHHHHHhcc
Confidence 23455555 9999999999865 5667777777655555688888 5555555554 9999999999999763
No 49
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.81 E-value=3.9e-19 Score=185.92 Aligned_cols=67 Identities=34% Similarity=0.485 Sum_probs=60.4
Q ss_pred ccCCCC-CCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhhc
Q 007502 522 HIHKCN-IPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 598 (601)
Q Consensus 522 ~L~~I~-vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~~ 598 (601)
.+.++. +|+|||+|++|.++|.+.++.+.+.+++. +++++ ++++|..|.+ .|+++++.|..|+.++.
T Consensus 258 ~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~--~~~~I--~~~gH~~h~e------~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 258 LIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNA--ELVEI--PGAGHLPHLE------RPEEVAALLRSFIARLR 325 (326)
T ss_pred hhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCc--eEEEe--CCCCcccccC------CHHHHHHHHHHHHHHhc
Confidence 566776 99999999999999999999999999877 89988 7889999986 89999999999998764
No 50
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.81 E-value=4.5e-18 Score=183.97 Aligned_cols=162 Identities=15% Similarity=0.175 Sum_probs=97.3
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccChhhhcCCCcc
Q 007502 365 PAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVV 444 (601)
Q Consensus 365 ~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~~~~~g~~~~ 444 (601)
.++++++.....++..++.++||||||.+++.+|..+| ++|+++|+++++......... ... ..
T Consensus 250 ~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p--~ri~a~V~~~~~~~~~~~~~~--~~~---------~~--- 313 (414)
T PRK05077 250 QAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEP--PRLKAVACLGPVVHTLLTDPK--RQQ---------QV--- 313 (414)
T ss_pred HHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCC--cCceEEEEECCccchhhcchh--hhh---------hc---
Confidence 35666666554444468999999999999999999854 899999999987542110000 000 00
Q ss_pred chHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCcccccccc-
Q 007502 445 PLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHI- 523 (601)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~L- 523 (601)
+......+...+.... .+.+.+ ......+.. .....+
T Consensus 314 ---------------p~~~~~~la~~lg~~~-~~~~~l----------------~~~l~~~sl----------~~~~~l~ 351 (414)
T PRK05077 314 ---------------PEMYLDVLASRLGMHD-ASDEAL----------------RVELNRYSL----------KVQGLLG 351 (414)
T ss_pred ---------------hHHHHHHHHHHhCCCC-CChHHH----------------HHHhhhccc----------hhhhhhc
Confidence 0000000000000000 011111 111111100 000111
Q ss_pred CCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 007502 524 HKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 597 (601)
Q Consensus 524 ~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~ 597 (601)
.++++|+|+|+|++|.++|++.++.+.+.+++. +++++ +...+.+ .++++.+.|.+||+++
T Consensus 352 ~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~--~l~~i-----~~~~~~e------~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 352 RRCPTPMLSGYWKNDPFSPEEDSRLIASSSADG--KLLEI-----PFKPVYR------NFDKALQEISDWLEDR 412 (414)
T ss_pred cCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCC--eEEEc-----cCCCccC------CHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999988876 78877 3333433 7799999999999876
No 51
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.80 E-value=1.2e-17 Score=180.43 Aligned_cols=71 Identities=17% Similarity=0.199 Sum_probs=54.3
Q ss_pred ccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 007502 518 FYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 597 (601)
Q Consensus 518 d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~ 597 (601)
+....+.+|++|+++|+|++|.+.+ .....+.+.++. ..+++++ ++++|+.|.| +|+++++.|.+|++..
T Consensus 316 ~~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~-~~~~~~i--~~aGH~~~~E------~P~~f~~~l~~~~~~~ 385 (402)
T PLN02894 316 PLLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKV-PCEIIRV--PQGGHFVFLD------NPSGFHSAVLYACRKY 385 (402)
T ss_pred hHhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCC-CCcEEEe--CCCCCeeecc------CHHHHHHHHHHHHHHh
Confidence 3455688899999999999998765 556666666542 2367777 6777777765 8999999999998876
Q ss_pred c
Q 007502 598 D 598 (601)
Q Consensus 598 ~ 598 (601)
.
T Consensus 386 ~ 386 (402)
T PLN02894 386 L 386 (402)
T ss_pred c
Confidence 4
No 52
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.80 E-value=3.4e-18 Score=211.39 Aligned_cols=207 Identities=16% Similarity=0.274 Sum_probs=115.3
Q ss_pred CCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhcccc
Q 007502 354 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLA 433 (601)
Q Consensus 354 ~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~ 433 (601)
++++.++ +|+.++++.+ +. ++++|+||||||.+++.++.++| ++|+++|++++......... .......
T Consensus 1426 ~si~~~a-~~l~~ll~~l----~~--~~v~LvGhSmGG~iAl~~A~~~P--~~V~~lVlis~~p~~~~~~~--~~~~~~~ 1494 (1655)
T PLN02980 1426 LSVELVA-DLLYKLIEHI----TP--GKVTLVGYSMGARIALYMALRFS--DKIEGAVIISGSPGLKDEVA--RKIRSAK 1494 (1655)
T ss_pred CCHHHHH-HHHHHHHHHh----CC--CCEEEEEECHHHHHHHHHHHhCh--HhhCEEEEECCCCccCchHH--HHHHhhh
Confidence 4566666 8888887766 22 38999999999999999999976 89999999987543322110 0000000
Q ss_pred ChhhhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccC
Q 007502 434 DPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDR 513 (601)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 513 (601)
.. ........ .....+...|+...........+ .+...............+......+...
T Consensus 1495 ~~------------~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 1555 (1655)
T PLN02980 1495 DD------------SRARMLID-HGLEIFLENWYSGELWKSLRNHP-HFNKIVASRLLHKDVPSLAKLLSDLSIG----- 1555 (1655)
T ss_pred hh------------HHHHHHHh-hhHHHHHHHhccHHHhhhhccCH-HHHHHHHHHHhcCCHHHHHHHHHHhhhc-----
Confidence 00 00000000 00001111121110000000011 1111111111111122222222221111
Q ss_pred CCccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCC----------ceEEEEecCCCCCCCCcccccccccch
Q 007502 514 GGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPED----------LVTYKVFGEPSGPHYAHYDLVGGRMAV 583 (601)
Q Consensus 514 ~~~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~----------~~~l~vi~~~~~~h~gH~dfi~g~~~p 583 (601)
...+..+.+++|++|+|+|+|++|.+++ +.+.++.+.+++. ..+++++ ++++|..|.+ +|
T Consensus 1556 -~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI--~~aGH~~~lE------~P 1625 (1655)
T PLN02980 1556 -RQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEI--PNCGHAVHLE------NP 1625 (1655)
T ss_pred -ccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEE--CCCCCchHHH------CH
Confidence 1223456789999999999999999875 6677788887763 1367788 7777888775 89
Q ss_pred hhHHHHHHHHHhhhcCC
Q 007502 584 EQVYPCIVQFLGRYDSV 600 (601)
Q Consensus 584 e~v~~~I~eFL~~~~~~ 600 (601)
+++++.|.+||++....
T Consensus 1626 e~f~~~I~~FL~~~~~~ 1642 (1655)
T PLN02980 1626 LPVIRALRKFLTRLHNS 1642 (1655)
T ss_pred HHHHHHHHHHHHhcccc
Confidence 99999999999987644
No 53
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.80 E-value=2.7e-18 Score=184.16 Aligned_cols=74 Identities=19% Similarity=0.193 Sum_probs=58.9
Q ss_pred cccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCc--eEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 007502 519 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDL--VTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 596 (601)
Q Consensus 519 ~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~--~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~ 596 (601)
+.+.+++|++|+|+|+|++|.++|++..+.+.+.+++.. .+++++ .++++|..+.+ .|+++++.|.+||++
T Consensus 301 ~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i-~~~~GH~~~le------~p~~~~~~L~~FL~~ 373 (379)
T PRK00175 301 LAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEI-DSPYGHDAFLL------DDPRYGRLVRAFLER 373 (379)
T ss_pred HHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEe-CCCCCchhHhc------CHHHHHHHHHHHHHh
Confidence 467889999999999999999999999999999998753 245554 02455555543 889999999999998
Q ss_pred hcC
Q 007502 597 YDS 599 (601)
Q Consensus 597 ~~~ 599 (601)
...
T Consensus 374 ~~~ 376 (379)
T PRK00175 374 AAR 376 (379)
T ss_pred hhh
Confidence 754
No 54
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.79 E-value=7.2e-18 Score=172.92 Aligned_cols=56 Identities=18% Similarity=0.224 Sum_probs=45.4
Q ss_pred hhhhhhhHHHHHHHHHHHc-CCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCC
Q 007502 357 DHYLEEDVPAAMEYIRAQS-KPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLD 418 (601)
Q Consensus 357 ~~~a~~Dl~a~Id~L~~~~-g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~ 418 (601)
+++. +|+.+++++++.+. +. ++++++||||||.+++.++.. +.+|+++|+++|...
T Consensus 79 ~~~~-~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~---~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 79 EGID-ADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAPA---DLRVAGLVLLNPWVR 135 (274)
T ss_pred HHHH-HHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhhh---CCCccEEEEECCccC
Confidence 3454 89999999998764 33 379999999999999999765 368999999998743
No 55
>PRK05855 short chain dehydrogenase; Validated
Probab=99.78 E-value=3.6e-18 Score=192.66 Aligned_cols=65 Identities=11% Similarity=0.224 Sum_probs=54.3
Q ss_pred cCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhhc
Q 007502 523 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 598 (601)
Q Consensus 523 L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~~ 598 (601)
+..+++|+|+|+|++|.++|++..+.+.+.+++. +++++ .++|+.|.+ .|+++.+.|.+|+.+..
T Consensus 229 ~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~--~~~~~---~~gH~~~~e------~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 229 ERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPRL--WRREI---KAGHWLPMS------HPQVLAAAVAEFVDAVE 293 (582)
T ss_pred cCCccCceEEEEeCCCcccCHHHhccccccCCcc--eEEEc---cCCCcchhh------ChhHHHHHHHHHHHhcc
Confidence 5568999999999999999999999998888765 66665 356777765 78999999999998754
No 56
>PRK10566 esterase; Provisional
Probab=99.77 E-value=3.3e-17 Score=164.83 Aligned_cols=56 Identities=20% Similarity=0.267 Sum_probs=44.5
Q ss_pred EEEeCCCCCCCCCCCcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCCCCCCCCC
Q 007502 96 LWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGLSV 156 (601)
Q Consensus 96 ~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~rg~g~S~ 156 (601)
..+|.|.....++.+.||++||++.+...|. .+++.|+++||.|+++|+||+|.+.
T Consensus 14 ~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~-----~~~~~l~~~G~~v~~~d~~g~G~~~ 69 (249)
T PRK10566 14 VLHAFPAGQRDTPLPTVFFYHGFTSSKLVYS-----YFAVALAQAGFRVIMPDAPMHGARF 69 (249)
T ss_pred eEEEcCCCCCCCCCCEEEEeCCCCcccchHH-----HHHHHHHhCCCEEEEecCCcccccC
Confidence 3456676443334678999999999887663 6899999999999999999999764
No 57
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.74 E-value=7.8e-17 Score=167.03 Aligned_cols=226 Identities=19% Similarity=0.235 Sum_probs=141.1
Q ss_pred CCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHH-----Hh
Q 007502 354 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTL-----KL 428 (601)
Q Consensus 354 ~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l-----~~ 428 (601)
.++++|+.+++.++|+.+++.+|.+ +|.++|||+||+++..+++.++ ..+|++++++.+++++.....-. ..
T Consensus 157 ~~~edYi~e~l~~aid~v~~itg~~--~InliGyCvGGtl~~~ala~~~-~k~I~S~T~lts~~DF~~~g~l~if~n~~~ 233 (445)
T COG3243 157 KNLEDYILEGLSEAIDTVKDITGQK--DINLIGYCVGGTLLAAALALMA-AKRIKSLTLLTSPVDFSHAGDLGIFANEAT 233 (445)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCcc--ccceeeEecchHHHHHHHHhhh-hcccccceeeecchhhccccccccccCHHH
Confidence 3467888899999999999998865 8999999999999999999976 33599999999999887643211 00
Q ss_pred hccccChhhhcCCCccchHHHHHHhcCCCCCchhH-HHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHH-H
Q 007502 429 LLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYV-FSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAF-R 506 (601)
Q Consensus 429 l~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~ 506 (601)
+..+.......+ ...+..+...+.+.+...+. ..+...........+.+. ..+ .......+.....++.+.+ .
T Consensus 234 ~~~~~~~i~~~g---~lpg~~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdl-lyW-n~dst~~~~~~~~~~Lrn~y~ 308 (445)
T COG3243 234 IEALDADIVQKG---ILPGWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDL-LYW-NADSTRLPGAAHSEYLRNFYL 308 (445)
T ss_pred HHHHHhhhhhcc---CCChHHHHHHHHhcCccccchHHHHHHhcCCCCCCchhH-HHh-hCCCccCchHHHHHHHHHHHH
Confidence 111111111111 22233333333343333322 233333333332222221 112 2222466777777777544 3
Q ss_pred cCCcccCCCccc---cccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCccccccc--cc
Q 007502 507 EGGLRDRGGKFF---YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGG--RM 581 (601)
Q Consensus 507 ~~~~~~~~~~~d---~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g--~~ 581 (601)
.+.+.. +... ..-++.+|+||++++.|++|.++|++.+....+.+++ +++++.. ..||...+.+ ..
T Consensus 309 ~N~l~~--g~~~v~G~~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g-~~~f~l~------~sGHIa~vVN~p~~ 379 (445)
T COG3243 309 ENRLIR--GGLEVSGTMVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGG-EVTFVLS------RSGHIAGVVNPPGN 379 (445)
T ss_pred hChhhc--cceEECCEEechhhcccceEEEeecccccCCHHHHHHHHHhcCC-ceEEEEe------cCceEEEEeCCcch
Confidence 444433 2221 1237899999999999999999999999999999987 5666664 6777776666 22
Q ss_pred chhhHHH----HHHHHHhh
Q 007502 582 AVEQVYP----CIVQFLGR 596 (601)
Q Consensus 582 ~pe~v~~----~I~eFL~~ 596 (601)
...+.+. .+.+||..
T Consensus 380 ~k~~~w~n~~~~~~~Wl~~ 398 (445)
T COG3243 380 AKYQYWTNLPADAEAWLSG 398 (445)
T ss_pred hhhhcCCCCcchHHHHHHh
Confidence 3334444 66677754
No 58
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.73 E-value=2.1e-16 Score=167.81 Aligned_cols=227 Identities=17% Similarity=0.255 Sum_probs=141.5
Q ss_pred CCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCC---CccccceeEEEccCCCCCCchhHHHhhc
Q 007502 354 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCG---RESRLAAIVTLASSLDYTSSKSTLKLLL 430 (601)
Q Consensus 354 ~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P---~~~~V~~lVllap~~~~~~~~~~l~~l~ 430 (601)
+++++|+ +-+.++|+++ |. +++++|+||||..++.+++.+. .+.++++++++++++++...+..+..+.
T Consensus 150 f~ldDYi-~~l~~~i~~~----G~---~v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a 221 (406)
T TIGR01849 150 FDLEDYI-DYLIEFIRFL----GP---DIHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELA 221 (406)
T ss_pred CCHHHHH-HHHHHHHHHh----CC---CCcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHh
Confidence 6788998 7778888776 32 5999999999999888877753 1356999999999999876544443332
Q ss_pred cccC--hhh------------hcCCCccchHHHHHHh---cCCCCCchhHHHHHhhhccccccCCHHHHHHHHH--hhcC
Q 007502 431 PLAD--PAQ------------ALNVPVVPLGALLTAA---YPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVL--NNFC 491 (601)
Q Consensus 431 ~l~~--~~~------------~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~ 491 (601)
.... +.. -.|....+...+...+ .+...... ..+++..+.... .-..+...++.. ....
T Consensus 222 ~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~-~~~~~~~l~~gd-~~~~~~~~~f~~~y~d~~ 299 (406)
T TIGR01849 222 REKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKA-HSDFFLHLVKGD-GQEADKHRIFYDEYLAVM 299 (406)
T ss_pred hcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHHcCcchHHHH-HHHHHHHHhcCC-cchHHHHHHHHHHhhhcc
Confidence 1100 000 0111122222222211 12111111 112222221111 011122222222 3345
Q ss_pred CCcHHHHHHHHHH-HHcCCcccCCCccccc---cccCCCC-CCEEEEEeCCCCCCCHHHHHHHHHHC---CCCceEEEEe
Q 007502 492 TIPAKLILQLTTA-FREGGLRDRGGKFFYK---DHIHKCN-IPILAIAGDQDLICPPEAVEETVKLL---PEDLVTYKVF 563 (601)
Q Consensus 492 ~~~~~~l~~~~~~-~~~~~~~~~~~~~d~~---~~L~~I~-vPVLII~Ge~D~iVp~e~~~~l~~~l---p~~~~~l~vi 563 (601)
..+.+.+.++.+. +....+.. +.+... -++++|+ +|+|.|.|++|.|+|+++++.+.+.+ ++.+++..+.
T Consensus 300 dlpge~y~~~v~~vf~~n~L~~--G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~ 377 (406)
T TIGR01849 300 DMTAEFYLQTIDVVFQQFLLPQ--GKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQ 377 (406)
T ss_pred CCcHHHHHHHHHHHHHhCCccC--CcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeec
Confidence 6788888888854 44444332 222222 2788999 99999999999999999999999875 6666656554
Q ss_pred cCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 007502 564 GEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 597 (601)
Q Consensus 564 ~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~ 597 (601)
...||++.+.|...++++++.|.+||.++
T Consensus 378 -----~~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 378 -----PGVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred -----CCCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 57789998899999999999999999864
No 59
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.72 E-value=6.4e-17 Score=163.40 Aligned_cols=202 Identities=19% Similarity=0.279 Sum_probs=111.8
Q ss_pred hhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccChhhhcC
Q 007502 361 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALN 440 (601)
Q Consensus 361 ~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~~~~~g 440 (601)
++|+..++++++.... ++|+..+|.|+||++...+..+...+..+.+.++++.+.+.......+.....
T Consensus 131 t~D~~~~l~~l~~~~~--~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s--------- 199 (345)
T COG0429 131 TEDIRFFLDWLKARFP--PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFS--------- 199 (345)
T ss_pred hhHHHHHHHHHHHhCC--CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchh---------
Confidence 3999999999999744 35999999999997777777775545667888888877665222111110000
Q ss_pred CCccchHHHHHHhcCCCCCchhHHHHHhhhccc-cccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCcccc
Q 007502 441 VPVVPLGALLTAAYPLSSSPPYVFSWLNNLISA-EDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFY 519 (601)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~ 519 (601)
...+...+.. ++.+........ ............. . ...+.++-. .......++.+..+|
T Consensus 200 --~~ly~r~l~~---------~L~~~~~~kl~~l~~~~p~~~~~~ik-~------~~ti~eFD~-~~Tap~~Gf~da~dY 260 (345)
T COG0429 200 --LRLYSRYLLR---------NLKRNAARKLKELEPSLPGTVLAAIK-R------CRTIREFDD-LLTAPLHGFADAEDY 260 (345)
T ss_pred --hhhhHHHHHH---------HHHHHHHHHHHhcCcccCcHHHHHHH-h------hchHHhccc-eeeecccCCCcHHHH
Confidence 0000000000 000000000000 0000000000000 0 000111110 011122333444455
Q ss_pred cc------ccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccc-hh-hHHHHHH
Q 007502 520 KD------HIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMA-VE-QVYPCIV 591 (601)
Q Consensus 520 ~~------~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~-pe-~v~~~I~ 591 (601)
.+ .+.+|.+|+|||++.+|++++++..-+.....+ .++.+.+- .|+||.+|+.+... +. +..+.|.
T Consensus 261 Yr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~n-p~v~l~~t-----~~GGHvGfl~~~~~~~~~W~~~ri~ 334 (345)
T COG0429 261 YRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLN-PNVLLQLT-----EHGGHVGFLGGKLLHPQMWLEQRIL 334 (345)
T ss_pred HHhccccccccccccceEEEecCCCCCCChhhCCcchhcCC-CceEEEee-----cCCceEEeccCccccchhhHHHHHH
Confidence 44 678899999999999999999988766665322 24466664 78999999986443 33 8899999
Q ss_pred HHHhhhc
Q 007502 592 QFLGRYD 598 (601)
Q Consensus 592 eFL~~~~ 598 (601)
+||+...
T Consensus 335 ~~l~~~~ 341 (345)
T COG0429 335 DWLDPFL 341 (345)
T ss_pred HHHHHHH
Confidence 9998764
No 60
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.71 E-value=2.9e-16 Score=159.15 Aligned_cols=198 Identities=18% Similarity=0.243 Sum_probs=117.0
Q ss_pred chhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhH-HHHHHHHHhCCCccccceeEEEccCC-CCCC-chhHHHhhccc
Q 007502 356 FDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGG-ILLYAMLSRCGRESRLAAIVTLASSL-DYTS-SKSTLKLLLPL 432 (601)
Q Consensus 356 ~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG-~IAl~~Aa~~P~~~~V~~lVllap~~-~~~~-~~~~l~~l~~l 432 (601)
+..++ +|+..+|+..+..+... +++|+|||||| .+++..+..+| ..+..+|++.-.. .... .......+..+
T Consensus 102 ~~~ma-~dv~~Fi~~v~~~~~~~--~~~l~GHsmGG~~~~m~~t~~~p--~~~~rliv~D~sP~~~~~~~~e~~e~i~~m 176 (315)
T KOG2382|consen 102 YEAMA-EDVKLFIDGVGGSTRLD--PVVLLGHSMGGVKVAMAETLKKP--DLIERLIVEDISPGGVGRSYGEYRELIKAM 176 (315)
T ss_pred HHHHH-HHHHHHHHHcccccccC--CceecccCcchHHHHHHHHHhcC--cccceeEEEecCCccCCcccchHHHHHHHH
Confidence 44666 99999999987543333 89999999999 77777778855 8899888877332 2211 11111111111
Q ss_pred cChhhhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhc----------CCCcHHHHHHHH
Q 007502 433 ADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNF----------CTIPAKLILQLT 502 (601)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~~ 502 (601)
.......+. ..... .....+.. ...+..+..++..++ +..+...+..++
T Consensus 177 ~~~d~~~~~-~~~rk--------------e~~~~l~~------~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~ 235 (315)
T KOG2382|consen 177 IQLDLSIGV-SRGRK--------------EALKSLIE------VGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLL 235 (315)
T ss_pred Hhccccccc-cccHH--------------HHHHHHHH------HhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHH
Confidence 111100000 00000 00000000 011111222222221 122333333333
Q ss_pred HHHHcCCcccCCCcccccccc--CCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccc
Q 007502 503 TAFREGGLRDRGGKFFYKDHI--HKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGR 580 (601)
Q Consensus 503 ~~~~~~~~~~~~~~~d~~~~L--~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~ 580 (601)
..+... .|...+ .....|||++.|.++..++.+.-.++.+.+|+. +++++ ++++|+.|.|
T Consensus 236 ~~~~~~---------s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~--e~~~l--d~aGHwVh~E----- 297 (315)
T KOG2382|consen 236 DEYEIL---------SYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPNV--EVHEL--DEAGHWVHLE----- 297 (315)
T ss_pred HHHHhh---------cccccccccccccceeEEecCCCCCcChhHHHHHHHhccch--heeec--ccCCceeecC-----
Confidence 332111 112222 556789999999999999999999999999986 88888 7799999997
Q ss_pred cchhhHHHHHHHHHhhhc
Q 007502 581 MAVEQVYPCIVQFLGRYD 598 (601)
Q Consensus 581 ~~pe~v~~~I~eFL~~~~ 598 (601)
.|+++.+.|.+|+++++
T Consensus 298 -~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 298 -KPEEFIESISEFLEEPE 314 (315)
T ss_pred -CHHHHHHHHHHHhcccC
Confidence 99999999999998875
No 61
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.67 E-value=1e-15 Score=140.25 Aligned_cols=40 Identities=30% Similarity=0.472 Sum_probs=36.5
Q ss_pred cEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCCCCCCCC
Q 007502 111 PLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGLS 155 (601)
Q Consensus 111 p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~rg~g~S 155 (601)
||||+||++.+...| ..+++.|+++||.|+++|+||+|.+
T Consensus 1 ~vv~~HG~~~~~~~~-----~~~~~~l~~~G~~v~~~~~~~~~~~ 40 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDY-----QPLAEALAEQGYAVVAFDYPGHGDS 40 (145)
T ss_dssp EEEEECTTTTTTHHH-----HHHHHHHHHTTEEEEEESCTTSTTS
T ss_pred CEEEECCCCCCHHHH-----HHHHHHHHHCCCEEEEEecCCCCcc
Confidence 689999999998777 3899999999999999999999965
No 62
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.66 E-value=1.4e-15 Score=145.36 Aligned_cols=200 Identities=16% Similarity=0.211 Sum_probs=126.5
Q ss_pred CCCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccc
Q 007502 353 DWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPL 432 (601)
Q Consensus 353 d~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l 432 (601)
.|++.+++..|+.++|+.+++..+ ..+.+.|||||||.+.-.+... .++.+....+........+.....+..+
T Consensus 80 ~~~~~DwA~~D~~aal~~~~~~~~--~~P~y~vgHS~GGqa~gL~~~~----~k~~a~~vfG~gagwsg~m~~~~~l~~~ 153 (281)
T COG4757 80 QWRYLDWARLDFPAALAALKKALP--GHPLYFVGHSFGGQALGLLGQH----PKYAAFAVFGSGAGWSGWMGLRERLGAV 153 (281)
T ss_pred ccchhhhhhcchHHHHHHHHhhCC--CCceEEeeccccceeecccccC----cccceeeEeccccccccchhhhhcccce
Confidence 366788989999999999988643 3489999999999987766544 3566665555554443332221111100
Q ss_pred cChhhhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCccc
Q 007502 433 ADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRD 512 (601)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 512 (601)
.. .++ ..+.+..|...+ + +.+.......|...+++|.++.+...+-.
T Consensus 154 ~l----~~l-----------------v~p~lt~w~g~~-------p-----~~l~G~G~d~p~~v~RdW~RwcR~p~y~f 200 (281)
T COG4757 154 LL----WNL-----------------VGPPLTFWKGYM-------P-----KDLLGLGSDLPGTVMRDWARWCRHPRYYF 200 (281)
T ss_pred ee----ccc-----------------cccchhhccccC-------c-----HhhcCCCccCcchHHHHHHHHhcCccccc
Confidence 00 000 000111111110 1 11112223567788888888887654332
Q ss_pred C-CCccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHH
Q 007502 513 R-GGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIV 591 (601)
Q Consensus 513 ~-~~~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~ 591 (601)
. .....+.+.++.+++||..+...+|+.+|+...+.+.+..+|+..+...+... .+..+|+.++.. .-|.+++.++
T Consensus 201 ddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~-~~~lGH~gyfR~--~~Ealwk~~L 277 (281)
T COG4757 201 DDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRA-EGPLGHMGYFRE--PFEALWKEML 277 (281)
T ss_pred cChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcc-cCcccchhhhcc--chHHHHHHHH
Confidence 2 22233566788999999999999999999999999999999986666666222 236788876542 2288999999
Q ss_pred HHH
Q 007502 592 QFL 594 (601)
Q Consensus 592 eFL 594 (601)
+|+
T Consensus 278 ~w~ 280 (281)
T COG4757 278 GWF 280 (281)
T ss_pred Hhh
Confidence 886
No 63
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.65 E-value=8.6e-15 Score=166.43 Aligned_cols=162 Identities=22% Similarity=0.205 Sum_probs=102.9
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccChhhhcCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 441 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~~~~~g~ 441 (601)
+|+.++++++.+...++.+++.++|||.||.+++..+.+. +.+++.|...+.++-.... .
T Consensus 455 ~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~---~~f~a~~~~~~~~~~~~~~----------------~- 514 (620)
T COG1506 455 EDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKT---PRFKAAVAVAGGVDWLLYF----------------G- 514 (620)
T ss_pred HHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcC---chhheEEeccCcchhhhhc----------------c-
Confidence 8999999977666555557999999999999999999883 3788877777654321100 0
Q ss_pred CccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCcccccc
Q 007502 442 PVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKD 521 (601)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~ 521 (601)
.....+...+......... +.+.+.+ .....
T Consensus 515 ---------------~~~~~~~~~~~~~~~~~~~--~~~~~~~--------------------------------~sp~~ 545 (620)
T COG1506 515 ---------------ESTEGLRFDPEENGGGPPE--DREKYED--------------------------------RSPIF 545 (620)
T ss_pred ---------------ccchhhcCCHHHhCCCccc--ChHHHHh--------------------------------cChhh
Confidence 0000000000000000000 0000000 01233
Q ss_pred ccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCC--ceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhhcC
Q 007502 522 HIHKCNIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 599 (601)
Q Consensus 522 ~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~--~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~~~ 599 (601)
...+|++|+|+|||++|..||.+.+.++++.+... .++++++ ++.+|. +...++...+++.+++|++++.+
T Consensus 546 ~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~-----p~e~H~--~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 546 YADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVF-----PDEGHG--FSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred hhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEe-----CCCCcC--CCCchhHHHHHHHHHHHHHHHhc
Confidence 57789999999999999999999999999887643 5577777 555664 22234567899999999998864
No 64
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.63 E-value=6.9e-16 Score=151.61 Aligned_cols=55 Identities=29% Similarity=0.512 Sum_probs=46.8
Q ss_pred hhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccC
Q 007502 358 HYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASS 416 (601)
Q Consensus 358 ~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~ 416 (601)
++..+|+.+.++.+++.+|.+ +++++||||||++++.+++++| ++|+++|+++++
T Consensus 24 ~~~~~~~~~~~~~~~~~l~~~--~~~~vG~S~Gg~~~~~~a~~~p--~~v~~lvl~~~~ 78 (230)
T PF00561_consen 24 DYTTDDLAADLEALREALGIK--KINLVGHSMGGMLALEYAAQYP--ERVKKLVLISPP 78 (230)
T ss_dssp THCHHHHHHHHHHHHHHHTTS--SEEEEEETHHHHHHHHHHHHSG--GGEEEEEEESES
T ss_pred cccHHHHHHHHHHHHHHhCCC--CeEEEEECCChHHHHHHHHHCc--hhhcCcEEEeee
Confidence 333477777777777777775 7999999999999999999976 899999999986
No 65
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.63 E-value=5.8e-15 Score=144.79 Aligned_cols=142 Identities=20% Similarity=0.263 Sum_probs=102.9
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccChhhhcCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 441 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~~~~~g~ 441 (601)
+|+.++.++|+.++| .+++++|+|+|||+...+.+|++. + ++++|+.+|......
T Consensus 113 ~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~--~--~~alVL~SPf~S~~r-------------------- 167 (258)
T KOG1552|consen 113 ADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRY--P--LAAVVLHSPFTSGMR-------------------- 167 (258)
T ss_pred hhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcC--C--cceEEEeccchhhhh--------------------
Confidence 999999999999998 667999999999999999999993 2 999999998743211
Q ss_pred CccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCcccccc
Q 007502 442 PVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKD 521 (601)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~ 521 (601)
.+++..... +.. +.+...+
T Consensus 168 ----------v~~~~~~~~------------------------~~~---------------------------d~f~~i~ 186 (258)
T KOG1552|consen 168 ----------VAFPDTKTT------------------------YCF---------------------------DAFPNIE 186 (258)
T ss_pred ----------hhccCcceE------------------------Eee---------------------------ccccccC
Confidence 000000000 000 0111135
Q ss_pred ccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhhcC
Q 007502 522 HIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 599 (601)
Q Consensus 522 ~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~~~ 599 (601)
.++.|++|+|++||++|.++|.....++++.+++....+++ ...+|.+. +...++.+.+..|+....+
T Consensus 187 kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v------~g~gH~~~----~~~~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 187 KISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWV------KGAGHNDI----ELYPEYIEHLRRFISSVLP 254 (258)
T ss_pred cceeccCCEEEEecccCceecccccHHHHHhccccCCCcEE------ecCCCccc----ccCHHHHHHHHHHHHHhcc
Confidence 67889999999999999999999999999999874223444 45667653 2456888899999876543
No 66
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.63 E-value=2.2e-14 Score=150.06 Aligned_cols=198 Identities=23% Similarity=0.343 Sum_probs=105.5
Q ss_pred hhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccChhhhcC
Q 007502 361 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALN 440 (601)
Q Consensus 361 ~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~~~~~g 440 (601)
++|+.+++++++.++. ..|++.+|.||||++.+.|.++.....++.+.+.++.+++.......+. .+..
T Consensus 181 t~Dl~~~v~~i~~~~P--~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~--~~~~------- 249 (409)
T KOG1838|consen 181 TEDLREVVNHIKKRYP--QAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIE--TPLY------- 249 (409)
T ss_pred HHHHHHHHHHHHHhCC--CCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHh--cccc-------
Confidence 4999999999999954 4599999999999999999999663345777777777766421100000 0000
Q ss_pred CCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHH-HHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCcccc
Q 007502 441 VPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPE-LLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFY 519 (601)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~ 519 (601)
...+..++.. -+...... ... ...+.. +.......++++++-..+.. ...++....+|
T Consensus 250 --~~~y~~~l~~-------------~l~~~~~~----~r~~~~~~~v-d~d~~~~~~SvreFD~~~t~-~~~gf~~~deY 308 (409)
T KOG1838|consen 250 --RRFYNRALTL-------------NLKRIVLR----HRHTLFEDPV-DFDVILKSRSVREFDEALTR-PMFGFKSVDEY 308 (409)
T ss_pred --hHHHHHHHHH-------------hHHHHHhh----hhhhhhhccc-hhhhhhhcCcHHHHHhhhhh-hhcCCCcHHHH
Confidence 0000111100 00000000 000 000000 00000001333333333221 11122222233
Q ss_pred c------cccCCCCCCEEEEEeCCCCCCCHHHH-HHHHHHCCCCceEEEEecCCCCCCCCcccccccc--cchhhHHHHH
Q 007502 520 K------DHIHKCNIPILAIAGDQDLICPPEAV-EETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGR--MAVEQVYPCI 590 (601)
Q Consensus 520 ~------~~L~~I~vPVLII~Ge~D~iVp~e~~-~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~--~~pe~v~~~I 590 (601)
. ..+.+|++|+|+|.+.+|+++|++.. ....+.-|+ +-+.+ ..|+||.+|+.+. ....++.+.+
T Consensus 309 Y~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~--v~l~~-----T~~GGHlgfleg~~p~~~~w~~~~l 381 (409)
T KOG1838|consen 309 YKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPN--VLLVI-----TSHGGHLGFLEGLWPSARTWMDKLL 381 (409)
T ss_pred HhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCc--EEEEE-----eCCCceeeeeccCCCccchhHHHHH
Confidence 3 36889999999999999999998743 333333343 24444 3788999988884 3334444448
Q ss_pred HHHHhhh
Q 007502 591 VQFLGRY 597 (601)
Q Consensus 591 ~eFL~~~ 597 (601)
.+|+.+.
T Consensus 382 ~ef~~~~ 388 (409)
T KOG1838|consen 382 VEFLGNA 388 (409)
T ss_pred HHHHHHH
Confidence 8888653
No 67
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.62 E-value=4e-14 Score=151.74 Aligned_cols=224 Identities=15% Similarity=0.126 Sum_probs=122.7
Q ss_pred CCchhhhhhhHHHHHHHHHHHcCCCCCcEE-EEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCch-hHH-Hhhc
Q 007502 354 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLL-AIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSK-STL-KLLL 430 (601)
Q Consensus 354 ~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~-LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~-~~l-~~l~ 430 (601)
+++.+++ +++.++++.+ |+. +++ ++||||||++++.+|.++| ++|+++|++++........ ..+ ....
T Consensus 141 ~t~~d~~-~~~~~ll~~l----gi~--~~~~vvG~SmGG~ial~~a~~~P--~~v~~lv~ia~~~~~~~~~~~~~~~~~~ 211 (389)
T PRK06765 141 VTILDFV-RVQKELIKSL----GIA--RLHAVMGPSMGGMQAQEWAVHYP--HMVERMIGVIGNPQNDAWTSVNVLQNWA 211 (389)
T ss_pred CcHHHHH-HHHHHHHHHc----CCC--CceEEEEECHHHHHHHHHHHHCh--HhhheEEEEecCCCCChhHHHHHHHHHH
Confidence 5666766 7777766655 553 776 9999999999999999976 9999999998765443321 111 1010
Q ss_pred -cc-cChhhhcCC---CccchHHH---HHHhcCCCCCchhHHHHHhhhcc-cc----c---cCCH-HHHHHHHHhhcCCC
Q 007502 431 -PL-ADPAQALNV---PVVPLGAL---LTAAYPLSSSPPYVFSWLNNLIS-AE----D---MMHP-ELLKKLVLNNFCTI 493 (601)
Q Consensus 431 -~l-~~~~~~~g~---~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~-~~----~---~~~~-~~~~~~~~~~~~~~ 493 (601)
.+ ..+....|. ...+...+ ............++...+..... .. . .+.. ..+...........
T Consensus 212 ~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~ 291 (389)
T PRK06765 212 EAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELV 291 (389)
T ss_pred HHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhcc
Confidence 00 111000010 00011100 00000011111111111110000 00 0 0011 12222222223344
Q ss_pred cHHHHHHHHHHHHcCCcccCCCccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCC--ceEEEEecCCC-CCC
Q 007502 494 PAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPS-GPH 570 (601)
Q Consensus 494 ~~~~l~~~~~~~~~~~~~~~~~~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~--~~~l~vi~~~~-~~h 570 (601)
....+..+.+.+..-.... ..-++.+.+++|++|+|+|+|++|.++|++..+++.+.+++. +.+++++ ++ .+|
T Consensus 292 Dan~~l~l~~a~~~~d~g~--~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I--~s~~GH 367 (389)
T PRK06765 292 DANHWLYLAKAVQLFDAGH--GFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEI--ESINGH 367 (389)
T ss_pred ChhhHHHHHHHHHhcCCcc--ccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEE--CCCCCc
Confidence 4556666666554221111 111456788999999999999999999999999999998742 3477777 32 445
Q ss_pred CCcccccccccchhhHHHHHHHHHhh
Q 007502 571 YAHYDLVGGRMAVEQVYPCIVQFLGR 596 (601)
Q Consensus 571 ~gH~dfi~g~~~pe~v~~~I~eFL~~ 596 (601)
..|.+ .++++.+.|.+||++
T Consensus 368 ~~~le------~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 368 MAGVF------DIHLFEKKIYEFLNR 387 (389)
T ss_pred chhhc------CHHHHHHHHHHHHcc
Confidence 55543 889999999999975
No 68
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.61 E-value=1e-14 Score=137.93 Aligned_cols=154 Identities=22% Similarity=0.438 Sum_probs=110.9
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccChhhhcCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 441 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~~~~~g~ 441 (601)
-|-.++++++..+...+..|++|.|.|+||++|..+|++ ..+++.++|+-++........
T Consensus 131 lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask--~~~ri~~~ivENTF~SIp~~~------------------ 190 (300)
T KOG4391|consen 131 LDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASK--NSDRISAIIVENTFLSIPHMA------------------ 190 (300)
T ss_pred ccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeecc--chhheeeeeeechhccchhhh------------------
Confidence 788899999999877777899999999999999999999 558999999988765442210
Q ss_pred CccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCcccccc
Q 007502 442 PVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKD 521 (601)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~ 521 (601)
...+++ +..+.+ ..+..+ +...-..
T Consensus 191 --------i~~v~p------~~~k~i---------------~~lc~k--------------------------n~~~S~~ 215 (300)
T KOG4391|consen 191 --------IPLVFP------FPMKYI---------------PLLCYK--------------------------NKWLSYR 215 (300)
T ss_pred --------hheecc------chhhHH---------------HHHHHH--------------------------hhhcchh
Confidence 000000 000000 000000 0001123
Q ss_pred ccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhhcC
Q 007502 522 HIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 599 (601)
Q Consensus 522 ~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~~~ 599 (601)
.+...++|.|+|.|..|.+||+-+.+++++.+|+..|++..+ +.+.|.|-. ..+-+++.|.+||.+...
T Consensus 216 ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eF-----P~gtHNDT~----i~dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 216 KIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEF-----PDGTHNDTW----ICDGYFQAIEDFLAEVVK 284 (300)
T ss_pred hhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeC-----CCCccCceE----EeccHHHHHHHHHHHhcc
Confidence 355677999999999999999999999999999988899988 777887744 336789999999987654
No 69
>PRK11071 esterase YqiA; Provisional
Probab=99.59 E-value=2.3e-14 Score=138.85 Aligned_cols=55 Identities=18% Similarity=0.078 Sum_probs=42.8
Q ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 007502 526 CNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 595 (601)
Q Consensus 526 I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~ 595 (601)
..+|+++|+|++|.+||++.+.++++.+ ++.++ ++..|.- ...+++.+.|.+|+.
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~~-----~~~~~-----~ggdH~f-----~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAAC-----RQTVE-----EGGNHAF-----VGFERYFNQIVDFLG 189 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHhc-----ceEEE-----CCCCcch-----hhHHHhHHHHHHHhc
Confidence 6688999999999999999999999953 34455 4555542 244889999999985
No 70
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.58 E-value=8.5e-14 Score=137.04 Aligned_cols=163 Identities=25% Similarity=0.318 Sum_probs=107.0
Q ss_pred hhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccChhhhcC
Q 007502 361 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALN 440 (601)
Q Consensus 361 ~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~~~~~g 440 (601)
.+|+.++++++.++..++..++.++|||+||.+++.++.++| +.++++|..++..+..........
T Consensus 45 ~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~--~~f~a~v~~~g~~d~~~~~~~~~~------------ 110 (213)
T PF00326_consen 45 VDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHP--DRFKAAVAGAGVSDLFSYYGTTDI------------ 110 (213)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTC--CGSSEEEEESE-SSTTCSBHHTCC------------
T ss_pred hhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccc--eeeeeeeccceecchhcccccccc------------
Confidence 499999999999887677779999999999999999999865 899999999988765432110000
Q ss_pred CCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCccccc
Q 007502 441 VPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYK 520 (601)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~ 520 (601)
+...+....... ....+.... +. ..
T Consensus 111 ---------------------~~~~~~~~~~~~--~~~~~~~~~----------------~s----------------~~ 135 (213)
T PF00326_consen 111 ---------------------YTKAEYLEYGDP--WDNPEFYRE----------------LS----------------PI 135 (213)
T ss_dssp ---------------------HHHGHHHHHSST--TTSHHHHHH----------------HH----------------HG
T ss_pred ---------------------cccccccccCcc--chhhhhhhh----------------hc----------------cc
Confidence 000000000000 001111111 10 11
Q ss_pred cccCC--CCCCEEEEEeCCCCCCCHHHHHHHHHHCCCC--ceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 007502 521 DHIHK--CNIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 596 (601)
Q Consensus 521 ~~L~~--I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~--~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~ 596 (601)
..+.+ +++|+||+||++|..||++.+.++++.+... +.++.++ ++.+|. +...+...++.+.+.+||++
T Consensus 136 ~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~-----p~~gH~--~~~~~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 136 SPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIF-----PGEGHG--FGNPENRRDWYERILDFFDK 208 (213)
T ss_dssp GGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEE-----TT-SSS--TTSHHHHHHHHHHHHHHHHH
T ss_pred cccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEc-----CcCCCC--CCCchhHHHHHHHHHHHHHH
Confidence 23344 7899999999999999999999998777543 4577777 555562 22223556889999999998
Q ss_pred hcC
Q 007502 597 YDS 599 (601)
Q Consensus 597 ~~~ 599 (601)
+-+
T Consensus 209 ~l~ 211 (213)
T PF00326_consen 209 YLK 211 (213)
T ss_dssp HTT
T ss_pred HcC
Confidence 754
No 71
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.58 E-value=2.3e-14 Score=145.55 Aligned_cols=58 Identities=19% Similarity=0.263 Sum_probs=48.7
Q ss_pred chhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCC
Q 007502 356 FDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDY 419 (601)
Q Consensus 356 ~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~ 419 (601)
++.++ +|+..++++++.. +. .+++|+||||||.+++.++.++| ++++++|+++|....
T Consensus 79 ~~~~~-~Dv~~ai~~L~~~-~~--~~v~LvG~SmGG~vAl~~A~~~p--~~v~~lVL~~P~~~g 136 (266)
T TIGR03101 79 WDVWK-EDVAAAYRWLIEQ-GH--PPVTLWGLRLGALLALDAANPLA--AKCNRLVLWQPVVSG 136 (266)
T ss_pred HHHHH-HHHHHHHHHHHhc-CC--CCEEEEEECHHHHHHHHHHHhCc--cccceEEEeccccch
Confidence 45666 9999999999765 43 48999999999999999999965 899999999987543
No 72
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.57 E-value=1.3e-13 Score=143.82 Aligned_cols=167 Identities=20% Similarity=0.229 Sum_probs=99.1
Q ss_pred hhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccChhh
Q 007502 358 HYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQ 437 (601)
Q Consensus 358 ~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~~~ 437 (601)
... .|...++++++....++.++|.+.|.|+||.+++.+|+. +++|++++...|...-.. ..
T Consensus 154 ~~~-~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaL---d~rv~~~~~~vP~l~d~~--~~------------ 215 (320)
T PF05448_consen 154 RVY-LDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAAL---DPRVKAAAADVPFLCDFR--RA------------ 215 (320)
T ss_dssp HHH-HHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHH---SST-SEEEEESESSSSHH--HH------------
T ss_pred HHH-HHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHh---CccccEEEecCCCccchh--hh------------
Confidence 444 899999999998877777799999999999999999998 468999999887532100 00
Q ss_pred hcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCcc
Q 007502 438 ALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKF 517 (601)
Q Consensus 438 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 517 (601)
+.... .......+..++... .. ..+. ..+....+ +.+
T Consensus 216 ------------~~~~~-~~~~y~~~~~~~~~~-d~----~~~~----------------~~~v~~~L---------~Y~ 252 (320)
T PF05448_consen 216 ------------LELRA-DEGPYPEIRRYFRWR-DP----HHER----------------EPEVFETL---------SYF 252 (320)
T ss_dssp ------------HHHT---STTTHHHHHHHHHH-SC----THCH----------------HHHHHHHH---------HTT
T ss_pred ------------hhcCC-ccccHHHHHHHHhcc-CC----Cccc----------------HHHHHHHH---------hhh
Confidence 00000 000000111111100 00 0000 00111111 122
Q ss_pred ccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 007502 518 FYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 597 (601)
Q Consensus 518 d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~ 597 (601)
|...-.++|++|+++-.|-.|.++|+......+..++. .|++.++ +.++|.. .++...+..++||.+|
T Consensus 253 D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~-~K~l~vy-----p~~~He~------~~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 253 DAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG-PKELVVY-----PEYGHEY------GPEFQEDKQLNFLKEH 320 (320)
T ss_dssp -HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--S-SEEEEEE-----TT--SST------THHHHHHHHHHHHHH-
T ss_pred hHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCC-CeeEEec-----cCcCCCc------hhhHHHHHHHHHHhcC
Confidence 33445678999999999999999999999999999985 6889998 7788863 3344488999999875
No 73
>PRK11460 putative hydrolase; Provisional
Probab=99.56 E-value=1.9e-13 Score=136.76 Aligned_cols=52 Identities=15% Similarity=0.203 Sum_probs=41.3
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEcc
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLAS 415 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap 415 (601)
+.+.++++++..+.+++.++++|+||||||.+++.++.++| +.+.++|.+++
T Consensus 85 ~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~--~~~~~vv~~sg 136 (232)
T PRK11460 85 PTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEP--GLAGRVIAFSG 136 (232)
T ss_pred HHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCC--CcceEEEEecc
Confidence 56667777777777776678999999999999999998854 66777776554
No 74
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.53 E-value=2.5e-13 Score=133.93 Aligned_cols=54 Identities=15% Similarity=0.135 Sum_probs=47.2
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSL 417 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~ 417 (601)
.|+..++++++.+++++.++++|+||||||.+++.++.++| +.+.+++.+++..
T Consensus 77 ~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p--~~~~~~~~~~g~~ 130 (212)
T TIGR01840 77 ESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYP--DVFAGGASNAGLP 130 (212)
T ss_pred HHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCc--hhheEEEeecCCc
Confidence 77888899998887777679999999999999999999966 8899998888754
No 75
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.52 E-value=1.6e-12 Score=133.33 Aligned_cols=78 Identities=19% Similarity=0.353 Sum_probs=52.5
Q ss_pred CCCcceEEEE--eeCCCeEEEEEEeCCCCCCCCCCCcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCC--CCC
Q 007502 77 CSADELHYVS--VANCDWRLALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEV--RGA 152 (601)
Q Consensus 77 ~~~~~~~~~~--~~~~~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~--rg~ 152 (601)
|...++.+.. .+..+..+.+..|.|+.....+.|+|+|+||++.+...|... ..+.+.+.+.||.|+++|. ||+
T Consensus 8 ~~~~~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~--~~~~~la~~~g~~Vv~Pd~~~~g~ 85 (275)
T TIGR02821 8 CFGGTQGFYRHKSETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIK--AGAQRFAAEHGLALVAPDTSPRGT 85 (275)
T ss_pred ccCCEEEEEEEeccccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhh--hHHHHHHhhcCcEEEEeCCCCCcC
Confidence 5555665544 345777788888999753333456788999999988777321 1233444567999999998 666
Q ss_pred CCCC
Q 007502 153 GLSV 156 (601)
Q Consensus 153 g~S~ 156 (601)
|.+.
T Consensus 86 ~~~~ 89 (275)
T TIGR02821 86 GIAG 89 (275)
T ss_pred CCCC
Confidence 6444
No 76
>PLN02442 S-formylglutathione hydrolase
Probab=99.51 E-value=1.6e-12 Score=133.99 Aligned_cols=58 Identities=17% Similarity=0.272 Sum_probs=44.4
Q ss_pred hhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCC
Q 007502 358 HYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDY 419 (601)
Q Consensus 358 ~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~ 419 (601)
++..+++..+++......+ .++++++||||||..++.++.++| +++++++++++..++
T Consensus 123 ~~~~~~l~~~i~~~~~~~~--~~~~~i~G~S~GG~~a~~~a~~~p--~~~~~~~~~~~~~~~ 180 (283)
T PLN02442 123 DYVVKELPKLLSDNFDQLD--TSRASIFGHSMGGHGALTIYLKNP--DKYKSVSAFAPIANP 180 (283)
T ss_pred hhHHHHHHHHHHHHHHhcC--CCceEEEEEChhHHHHHHHHHhCc--hhEEEEEEECCccCc
Confidence 4444666666666544333 348999999999999999999976 899999999987553
No 77
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.50 E-value=9.6e-13 Score=148.01 Aligned_cols=55 Identities=20% Similarity=0.128 Sum_probs=46.4
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDY 419 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~ 419 (601)
+|+.++|+++..+.. .+.++.++||||||.+++.+|..+| +.++++|..++..+.
T Consensus 80 ~D~~~~i~~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~~~--~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 80 ADGYDLVDWIAKQPW-CDGNVGMLGVSYLAVTQLLAAVLQP--PALRAIAPQEGVWDL 134 (550)
T ss_pred hHHHHHHHHHHhCCC-CCCcEEEEEeChHHHHHHHHhccCC--CceeEEeecCcccch
Confidence 999999999988732 2359999999999999999999955 899999998877543
No 78
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.49 E-value=1.8e-13 Score=134.38 Aligned_cols=73 Identities=27% Similarity=0.381 Sum_probs=53.1
Q ss_pred CcceEEEEeeCCCeEEEEEEeCCCCCCCCCCCcEEEecCCCCCCcccccCCCCcHHHHHH-hCCCeEEEeCCCCCCCCCC
Q 007502 79 ADELHYVSVANCDWRLALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMA-GQGFDTWILEVRGAGLSVR 157 (601)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~a~~l~-~~G~~v~~~d~rg~g~S~~ 157 (601)
-||-.-++++++......|+-.|+ .+..+.+||+||.|.++-.| +.||..+. +--..++++|+||||.+.-
T Consensus 47 Fdekedv~i~~~~~t~n~Y~t~~~---~t~gpil~l~HG~G~S~LSf-----A~~a~el~s~~~~r~~a~DlRgHGeTk~ 118 (343)
T KOG2564|consen 47 FDEKEDVSIDGSDLTFNVYLTLPS---ATEGPILLLLHGGGSSALSF-----AIFASELKSKIRCRCLALDLRGHGETKV 118 (343)
T ss_pred hccccccccCCCcceEEEEEecCC---CCCccEEEEeecCcccchhH-----HHHHHHHHhhcceeEEEeeccccCcccc
Confidence 345556677766667777766665 23466788999999999888 46777775 4456788999999998775
Q ss_pred CC
Q 007502 158 GS 159 (601)
Q Consensus 158 ~~ 159 (601)
..
T Consensus 119 ~~ 120 (343)
T KOG2564|consen 119 EN 120 (343)
T ss_pred CC
Confidence 43
No 79
>PLN00021 chlorophyllase
Probab=99.49 E-value=1.1e-12 Score=136.54 Aligned_cols=53 Identities=19% Similarity=0.150 Sum_probs=41.9
Q ss_pred EEEEEeCCCCCCCCCCCcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCCCCCC
Q 007502 94 LALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAG 153 (601)
Q Consensus 94 l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~rg~g 153 (601)
+.++.|.|... ...++||++||++.+...|. .++++|+++||.|+++|++|.+
T Consensus 39 ~p~~v~~P~~~--g~~PvVv~lHG~~~~~~~y~-----~l~~~Las~G~~VvapD~~g~~ 91 (313)
T PLN00021 39 KPLLVATPSEA--GTYPVLLFLHGYLLYNSFYS-----QLLQHIASHGFIVVAPQLYTLA 91 (313)
T ss_pred ceEEEEeCCCC--CCCCEEEEECCCCCCcccHH-----HHHHHHHhCCCEEEEecCCCcC
Confidence 44556778642 23567899999998877664 7899999999999999999864
No 80
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.48 E-value=5.7e-13 Score=130.53 Aligned_cols=165 Identities=18% Similarity=0.211 Sum_probs=106.0
Q ss_pred hhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccChh
Q 007502 357 DHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPA 436 (601)
Q Consensus 357 ~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~~ 436 (601)
.... .|+..+++.+.....+++++|.+.|.|+||.+++.+++. ..+|++++++-|.+.--... .
T Consensus 154 r~v~-~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal---~~rik~~~~~~Pfl~df~r~------i------ 217 (321)
T COG3458 154 RGVF-LDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAAL---DPRIKAVVADYPFLSDFPRA------I------ 217 (321)
T ss_pred eeeh-HHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhc---Chhhhcccccccccccchhh------e------
Confidence 3444 788888888877777777899999999999999999888 57899998877764321100 0
Q ss_pred hhcCCCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCc
Q 007502 437 QALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGK 516 (601)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 516 (601)
...... +-..+..+....- ........-. +.
T Consensus 218 ------------------~~~~~~-----------------~ydei~~y~k~h~--~~e~~v~~TL------------~y 248 (321)
T COG3458 218 ------------------ELATEG-----------------PYDEIQTYFKRHD--PKEAEVFETL------------SY 248 (321)
T ss_pred ------------------eecccC-----------------cHHHHHHHHHhcC--chHHHHHHHH------------hh
Confidence 000000 0011111111000 0000000000 12
Q ss_pred cccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 007502 517 FFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 596 (601)
Q Consensus 517 ~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~ 596 (601)
+|...-..+|++|+|+..|-.|+++|+......+..++. .|++.++ +..+|.+ .|.-..+.+..|++.
T Consensus 249 fD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~-~K~i~iy-----~~~aHe~------~p~~~~~~~~~~l~~ 316 (321)
T COG3458 249 FDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTT-SKTIEIY-----PYFAHEG------GPGFQSRQQVHFLKI 316 (321)
T ss_pred hhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccC-CceEEEe-----ecccccc------CcchhHHHHHHHHHh
Confidence 233345678999999999999999999999999999986 5678887 6777876 455666778888876
Q ss_pred hc
Q 007502 597 YD 598 (601)
Q Consensus 597 ~~ 598 (601)
..
T Consensus 317 l~ 318 (321)
T COG3458 317 LF 318 (321)
T ss_pred hc
Confidence 43
No 81
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.46 E-value=1.4e-12 Score=127.80 Aligned_cols=67 Identities=25% Similarity=0.507 Sum_probs=51.5
Q ss_pred ccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 007502 520 KDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 595 (601)
Q Consensus 520 ~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~ 595 (601)
...+.++++|+++++|++|.+.|......+.+.+++ ..++.++ ++++|..|.+ .|+.+.+.+.+|++
T Consensus 214 ~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~-~~~~~~~--~~~gH~~~~~------~p~~~~~~i~~~~~ 280 (282)
T COG0596 214 RAALARITVPTLIIHGEDDPVVPAELARRLAAALPN-DARLVVI--PGAGHFPHLE------APEAFAAALLAFLE 280 (282)
T ss_pred chhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCC-CceEEEe--CCCCCcchhh------cHHHHHHHHHHHHh
Confidence 346778889999999999977777767777777775 2377777 6677777775 77888888888554
No 82
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.38 E-value=6.8e-11 Score=121.90 Aligned_cols=220 Identities=20% Similarity=0.226 Sum_probs=128.8
Q ss_pred hhhHHHHHHHHHHHcCCCCCcEE-EEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhcc---ccChh
Q 007502 361 EEDVPAAMEYIRAQSKPKDGKLL-AIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLP---LADPA 436 (601)
Q Consensus 361 ~~Dl~a~Id~L~~~~g~~~~kv~-LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~---l~~~~ 436 (601)
+.|...+-..+.+.+|++ ++. +||-||||+.++.++..|| ++|+++|.+++..........+..... ..++.
T Consensus 129 i~D~V~aq~~ll~~LGI~--~l~avvGgSmGGMqaleWa~~yP--d~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP~ 204 (368)
T COG2021 129 IRDMVRAQRLLLDALGIK--KLAAVVGGSMGGMQALEWAIRYP--DRVRRAIPIATAARLSAQNIAFNEVQRQAIEADPD 204 (368)
T ss_pred HHHHHHHHHHHHHhcCcc--eEeeeeccChHHHHHHHHHHhCh--HHHhhhheecccccCCHHHHHHHHHHHHHHHhCCC
Confidence 466666667777777886 665 9999999999999999977 999999999987665554333321111 11121
Q ss_pred hhcC------CC--ccchHHHHHHhcCCCCCchhHHHHHhhhccccccC---CHHHHHHHHH----hhcCCCcHHHHHHH
Q 007502 437 QALN------VP--VVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMM---HPELLKKLVL----NNFCTIPAKLILQL 501 (601)
Q Consensus 437 ~~~g------~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~----~~~~~~~~~~l~~~ 501 (601)
...| .| +.....++..+. . .....+.+.+.......... ....++.++. .........++..+
T Consensus 205 ~n~G~Y~~~~~P~~GL~~AR~l~~lt-Y-rS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~l 282 (368)
T COG2021 205 WNGGDYYEGTQPERGLRLARMLAHLT-Y-RSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDANSYLYL 282 (368)
T ss_pred ccCCCccCCCCcchhHHHHHHHHHHH-c-cCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCcchHHHH
Confidence 1111 00 001111111110 1 11111222221111000000 1122222222 33345566777777
Q ss_pred HHHHHcCCcccCCCccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCccccccccc
Q 007502 502 TTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRM 581 (601)
Q Consensus 502 ~~~~~~~~~~~~~~~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~ 581 (601)
.+.+..-.... +.-+....+++|++|+|++.=+.|.+.|++..+++.+.++.... ++++. ..+||..|+.
T Consensus 283 t~ald~~D~s~--~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~-~~~i~----S~~GHDaFL~--- 352 (368)
T COG2021 283 TRALDYHDVSR--GRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGA-LREID----SPYGHDAFLV--- 352 (368)
T ss_pred HHHHHhcCCCC--CcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCc-eEEec----CCCCchhhhc---
Confidence 77665322111 11234556899999999999999999999999999999998743 66662 3447777764
Q ss_pred chhhHHHHHHHHHhh
Q 007502 582 AVEQVYPCIVQFLGR 596 (601)
Q Consensus 582 ~pe~v~~~I~eFL~~ 596 (601)
+.+.+.+.|..||+.
T Consensus 353 e~~~~~~~i~~fL~~ 367 (368)
T COG2021 353 ESEAVGPLIRKFLAL 367 (368)
T ss_pred chhhhhHHHHHHhhc
Confidence 446677899999874
No 83
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.37 E-value=1.1e-11 Score=130.79 Aligned_cols=159 Identities=21% Similarity=0.317 Sum_probs=86.6
Q ss_pred HHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccChhhhcCCCccc
Q 007502 366 AAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVP 445 (601)
Q Consensus 366 a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~~~~~g~~~~~ 445 (601)
++++++....-++..+|.++|.||||.+|.++|..+ +++|+++|.++++++..-.... . ....
T Consensus 247 aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le--~~RlkavV~~Ga~vh~~ft~~~--~---------~~~~---- 309 (411)
T PF06500_consen 247 AVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALE--DPRLKAVVALGAPVHHFFTDPE--W---------QQRV---- 309 (411)
T ss_dssp HHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHT--TTT-SEEEEES---SCGGH-HH--H---------HTTS----
T ss_pred HHHHHHhcCCccChhheEEEEeccchHHHHHHHHhc--ccceeeEeeeCchHhhhhccHH--H---------HhcC----
Confidence 556677665444556899999999999999999873 4899999999998654211000 0 0000
Q ss_pred hHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCcccccc--cc
Q 007502 446 LGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKD--HI 523 (601)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~--~L 523 (601)
+..+...+...++... .+.+.+...+ .. +.... -+
T Consensus 310 --------------P~my~d~LA~rlG~~~-~~~~~l~~el----------------~~------------~SLk~qGlL 346 (411)
T PF06500_consen 310 --------------PDMYLDVLASRLGMAA-VSDESLRGEL----------------NK------------FSLKTQGLL 346 (411)
T ss_dssp ---------------HHHHHHHHHHCT-SC-E-HHHHHHHG----------------GG------------GSTTTTTTT
T ss_pred --------------CHHHHHHHHHHhCCcc-CCHHHHHHHH----------------Hh------------cCcchhccc
Confidence 0001111111111110 1111111111 00 11111 23
Q ss_pred --CCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 007502 524 --HKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 597 (601)
Q Consensus 524 --~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~ 597 (601)
.+..+|+|.+.|++|+++|.++.+-++..-.+. +...+ + ..-.|..| +.....+.+||++.
T Consensus 347 ~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~g--k~~~~--~--~~~~~~gy-------~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 347 SGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDG--KALRI--P--SKPLHMGY-------PQALDEIYKWLEDK 409 (411)
T ss_dssp TSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT---EEEEE-----SSSHHHHH-------HHHHHHHHHHHHHH
T ss_pred cCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCC--ceeec--C--CCccccch-------HHHHHHHHHHHHHh
Confidence 677899999999999999999998888875543 55555 1 22346643 67888999999864
No 84
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.37 E-value=4.7e-12 Score=118.87 Aligned_cols=178 Identities=15% Similarity=0.207 Sum_probs=109.7
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccChhhhcCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 441 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~~~~~g~ 441 (601)
+|...+++-++.. .. +++.++|||-||..++.+|++++ +.|.++|+.++........... +
T Consensus 99 ~Da~~avdLM~aL-k~--~~fsvlGWSdGgiTalivAak~~--e~v~rmiiwga~ayvn~~~~ma--~------------ 159 (277)
T KOG2984|consen 99 KDAEYAVDLMEAL-KL--EPFSVLGWSDGGITALIVAAKGK--EKVNRMIIWGAAAYVNHLGAMA--F------------ 159 (277)
T ss_pred HhHHHHHHHHHHh-CC--CCeeEeeecCCCeEEEEeeccCh--hhhhhheeecccceecchhHHH--H------------
Confidence 5555555544432 22 38999999999999999999966 9999999988765543321100 0
Q ss_pred CccchHHHHHHhcCCCCCchhHHHHHhhhccccc-cCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCccccc
Q 007502 442 PVVPLGALLTAAYPLSSSPPYVFSWLNNLISAED-MMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYK 520 (601)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~ 520 (601)
..+. .+..|........+ ....+.+.... ..|.... .+|..+.+.--+.
T Consensus 160 -----kgiR-----------dv~kWs~r~R~P~e~~Yg~e~f~~~w------------a~wvD~v--~qf~~~~dG~fCr 209 (277)
T KOG2984|consen 160 -----KGIR-----------DVNKWSARGRQPYEDHYGPETFRTQW------------AAWVDVV--DQFHSFCDGRFCR 209 (277)
T ss_pred -----hchH-----------HHhhhhhhhcchHHHhcCHHHHHHHH------------HHHHHHH--HHHhhcCCCchHh
Confidence 0000 11122222111100 01111111111 1111111 1122222222245
Q ss_pred cccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhhc
Q 007502 521 DHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 598 (601)
Q Consensus 521 ~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~~ 598 (601)
-.+.+|+||+||++|+.|++++...+-.+....+.+ ++.+. +.+.|..|+- -+++++..+.+||++.+
T Consensus 210 ~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a--~~~~~--peGkHn~hLr------ya~eFnklv~dFl~~~~ 277 (277)
T KOG2984|consen 210 LVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLA--KVEIH--PEGKHNFHLR------YAKEFNKLVLDFLKSTE 277 (277)
T ss_pred hhcccccCCeeEeeCCcCCCCCCCCccchhhhcccc--eEEEc--cCCCcceeee------chHHHHHHHHHHHhccC
Confidence 578999999999999999999999888888888877 77777 7777888875 56999999999998753
No 85
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.35 E-value=6.1e-12 Score=124.42 Aligned_cols=187 Identities=25% Similarity=0.346 Sum_probs=118.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCeeccccccchhh-hhhh---cHHHHHhcccceeeeCCCchhhhhhhHHHHHHHHHHH
Q 007502 299 SSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQE-RLFS---TIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQ 374 (601)
Q Consensus 299 ~~~~~~~~~~la~~l~~la~~Gy~viaPdl~~~~~-~l~~---~~~~~~~~~~~l~~~d~s~~~~a~~Dl~a~Id~L~~~ 374 (601)
.-++++.++.++++| +++||.|++||+|+... .... ....+.... .+. .+... +|+.+++++++.+
T Consensus 23 ~~G~~~~~~~~ad~l---A~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~-~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 23 IFGLNPNIRDLADRL---AEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELF-----APR-PEQVA-ADLQAAVDYLRAQ 92 (218)
T ss_dssp TTBS-HHHHHHHHHH---HHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCH-----HHS-HHHHH-HHHHHHHHHHHCT
T ss_pred CCCCchHHHHHHHHH---HhcCCCEEecccccCCCCCccchhhHHHHHHHHH-----hhh-HHHHH-HHHHHHHHHHHhc
Confidence 346678999999999 99999999999998766 1111 111111100 001 23444 8999999999988
Q ss_pred cCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccChhhhcCCCccchHHHHHHhc
Q 007502 375 SKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAY 454 (601)
Q Consensus 375 ~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~~~~~g~~~~~~~~~~~~~~ 454 (601)
...+..++.++|+||||.+++.++.+ .+.+++.|..-|.....
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~---~~~~~a~v~~yg~~~~~---------------------------------- 135 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAAR---DPRVDAAVSFYGGSPPP---------------------------------- 135 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCC---TTTSSEEEEES-SSSGG----------------------------------
T ss_pred cccCCCcEEEEEEecchHHhhhhhhh---ccccceEEEEcCCCCCC----------------------------------
Confidence 64445699999999999999999877 25789888766511000
Q ss_pred CCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCccccccccCCCCCCEEEEE
Q 007502 455 PLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIA 534 (601)
Q Consensus 455 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~L~~I~vPVLII~ 534 (601)
.......++++|+++++
T Consensus 136 ---------------------------------------------------------------~~~~~~~~~~~P~l~~~ 152 (218)
T PF01738_consen 136 ---------------------------------------------------------------PPLEDAPKIKAPVLILF 152 (218)
T ss_dssp ---------------------------------------------------------------GHHHHGGG--S-EEEEE
T ss_pred ---------------------------------------------------------------cchhhhcccCCCEeecC
Confidence 00123456789999999
Q ss_pred eCCCCCCCHHHHHHHHHHCC--CCceEEEEecCCCCCCCCcccc--cccccchhhHHHHHHHHHhhh
Q 007502 535 GDQDLICPPEAVEETVKLLP--EDLVTYKVFGEPSGPHYAHYDL--VGGRMAVEQVYPCIVQFLGRY 597 (601)
Q Consensus 535 Ge~D~iVp~e~~~~l~~~lp--~~~~~l~vi~~~~~~h~gH~df--i~g~~~pe~v~~~I~eFL~~~ 597 (601)
|++|+.+|.+..+.+.+.+. +...+++++ ++++|.-...- -......++.++.+++||+++
T Consensus 153 g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y--~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 153 GENDPFFPPEEVEALEEALKAAGVDVEVHVY--PGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp ETT-TTS-HHHHHHHHHHHHCTTTTEEEEEE--TT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred ccCCCCCChHHHHHHHHHHHhcCCcEEEEEC--CCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 99999999998888877762 235678888 43444322221 112345688999999999986
No 86
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.35 E-value=6.7e-11 Score=114.58 Aligned_cols=70 Identities=21% Similarity=0.487 Sum_probs=43.6
Q ss_pred EEEEeeCCCeEEEEEEeCCCCCCCCCCCcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCCCCC-CCCCCC
Q 007502 83 HYVSVANCDWRLALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGA-GLSVRG 158 (601)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~rg~-g~S~~~ 158 (601)
|...+. +|-.+++|.-+|..+.+++|+.||+-+|++..-..| ..+|+||+..||+|+.+|.-.| |+|++.
T Consensus 5 hvi~~~-~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~-----agLA~YL~~NGFhViRyDsl~HvGlSsG~ 75 (294)
T PF02273_consen 5 HVIRLE-DGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHF-----AGLAEYLSANGFHVIRYDSLNHVGLSSGD 75 (294)
T ss_dssp EEEEET-TTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGG-----HHHHHHHHTTT--EEEE---B--------
T ss_pred ceeEcC-CCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHH-----HHHHHHHhhCCeEEEeccccccccCCCCC
Confidence 556666 899999999999999999999999999999887766 5899999999999999999877 877763
No 87
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.33 E-value=1.2e-11 Score=117.48 Aligned_cols=48 Identities=15% Similarity=0.242 Sum_probs=39.4
Q ss_pred CCCcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCCCCCCCCCCC
Q 007502 108 RNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGLSVRG 158 (601)
Q Consensus 108 ~~~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~rg~g~S~~~ 158 (601)
.+-.|||+||+-.+...- +...+|..|.+.|+.++.+|++|.|.|...
T Consensus 32 s~e~vvlcHGfrS~Kn~~---~~~~vA~~~e~~gis~fRfDF~GnGeS~gs 79 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAI---IMKNVAKALEKEGISAFRFDFSGNGESEGS 79 (269)
T ss_pred CceEEEEeeccccccchH---HHHHHHHHHHhcCceEEEEEecCCCCcCCc
Confidence 466899999998875321 235799999999999999999999988863
No 88
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.33 E-value=2.8e-11 Score=113.47 Aligned_cols=119 Identities=22% Similarity=0.338 Sum_probs=85.6
Q ss_pred hhHHHHHHHHHHHcCCCCCcE-EEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccChhhhcC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKL-LAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALN 440 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv-~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~~~~~g 440 (601)
+|..++++|++.+.. +.+. .|.|+|+|+.|++.+|.+.| .....+.+.|+....+
T Consensus 86 ~Da~aaldW~~~~hp--~s~~~~l~GfSFGa~Ia~~la~r~~---e~~~~is~~p~~~~~d------------------- 141 (210)
T COG2945 86 EDAAAALDWLQARHP--DSASCWLAGFSFGAYIAMQLAMRRP---EILVFISILPPINAYD------------------- 141 (210)
T ss_pred HHHHHHHHHHHhhCC--CchhhhhcccchHHHHHHHHHHhcc---cccceeeccCCCCchh-------------------
Confidence 999999999999843 2344 78999999999999999843 4455555555432100
Q ss_pred CCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCccccc
Q 007502 441 VPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYK 520 (601)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~ 520 (601)
.
T Consensus 142 -------------------------------------------------------------------------------f 142 (210)
T COG2945 142 -------------------------------------------------------------------------------F 142 (210)
T ss_pred -------------------------------------------------------------------------------h
Confidence 0
Q ss_pred cccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 007502 521 DHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 595 (601)
Q Consensus 521 ~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~ 595 (601)
..++-..+|.++|+|+.|.+++.....++++..+- +++++ ++..|+-|. .-..+.+.|.+||.
T Consensus 143 s~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~~~---~~i~i--~~a~HFF~g-------Kl~~l~~~i~~~l~ 205 (210)
T COG2945 143 SFLAPCPSPGLVIQGDADDVVDLVAVLKWQESIKI---TVITI--PGADHFFHG-------KLIELRDTIADFLE 205 (210)
T ss_pred hhccCCCCCceeEecChhhhhcHHHHHHhhcCCCC---ceEEe--cCCCceecc-------cHHHHHHHHHHHhh
Confidence 11334558999999999999999998888887442 55555 455666554 33778889999985
No 89
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.32 E-value=2.3e-11 Score=121.79 Aligned_cols=190 Identities=21% Similarity=0.289 Sum_probs=134.3
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCeeccccccchhhhhhhcH--HHHHhcccceeeeCCCchhhhhhhHHHHHHHHHHHcCC
Q 007502 300 SAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTI--DDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKP 377 (601)
Q Consensus 300 ~~~~~~~~~la~~l~~la~~Gy~viaPdl~~~~~~l~~~~--~~~~~~~~~l~~~d~s~~~~a~~Dl~a~Id~L~~~~g~ 377 (601)
.+++++|+..+.+| +.+||.|++||++...++..... ......+ .+. ..+..+.. .|+.+.+++|..+...
T Consensus 37 ~Gl~~~i~~~a~rl---A~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~-~d~~a~~~~L~~~~~~ 109 (236)
T COG0412 37 FGLNPHIRDVARRL---AKAGYVVLAPDLYGRQGDPTDIEDEPAELETG-LVE--RVDPAEVL-ADIDAALDYLARQPQV 109 (236)
T ss_pred cCCchHHHHHHHHH---HhCCcEEEechhhccCCCCCcccccHHHHhhh-hhc--cCCHHHHH-HHHHHHHHHHHhCCCC
Confidence 37888999999999 99999999999999877633222 2222222 111 12234555 9999999999987534
Q ss_pred CCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccChhhhcCCCccchHHHHHHhcCCC
Q 007502 378 KDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLS 457 (601)
Q Consensus 378 ~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~~~~~g~~~~~~~~~~~~~~~~~ 457 (601)
+..+|.++|+||||.+++.++.+. ..|++.|..-+.....
T Consensus 110 ~~~~ig~~GfC~GG~~a~~~a~~~---~~v~a~v~fyg~~~~~------------------------------------- 149 (236)
T COG0412 110 DPKRIGVVGFCMGGGLALLAATRA---PEVKAAVAFYGGLIAD------------------------------------- 149 (236)
T ss_pred CCceEEEEEEcccHHHHHHhhccc---CCccEEEEecCCCCCC-------------------------------------
Confidence 456899999999999999999883 2788887755432110
Q ss_pred CCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCccccccccCCCCCCEEEEEeCC
Q 007502 458 SSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQ 537 (601)
Q Consensus 458 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~L~~I~vPVLII~Ge~ 537 (601)
......++++|+|+++|+.
T Consensus 150 -------------------------------------------------------------~~~~~~~~~~pvl~~~~~~ 168 (236)
T COG0412 150 -------------------------------------------------------------DTADAPKIKVPVLLHLAGE 168 (236)
T ss_pred -------------------------------------------------------------cccccccccCcEEEEeccc
Confidence 0112457889999999999
Q ss_pred CCCCCHHHHHHHHHHCCCC--ceEEEEecCCCCCCCCccc-----ccccccchhhHHHHHHHHHhhhcC
Q 007502 538 DLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYD-----LVGGRMAVEQVYPCIVQFLGRYDS 599 (601)
Q Consensus 538 D~iVp~e~~~~l~~~lp~~--~~~l~vi~~~~~~h~gH~d-----fi~g~~~pe~v~~~I~eFL~~~~~ 599 (601)
|..+|.+....+.+.+... .+++.++ +...|.-..+ .-......+..|+.+++||+++..
T Consensus 169 D~~~p~~~~~~~~~~~~~~~~~~~~~~y--~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 169 DPYIPAADVDALAAALEDAGVKVDLEIY--PGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred CCCCChhHHHHHHHHHHhcCCCeeEEEe--CCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 9999999888888777665 4677777 2233332211 123344568899999999998753
No 90
>PRK10162 acetyl esterase; Provisional
Probab=99.30 E-value=3.1e-10 Score=118.96 Aligned_cols=58 Identities=16% Similarity=0.146 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHH---HcCCCCCcEEEEEEchhHHHHHHHHHhCC----CccccceeEEEccCCCC
Q 007502 362 EDVPAAMEYIRA---QSKPKDGKLLAIGHSMGGILLYAMLSRCG----RESRLAAIVTLASSLDY 419 (601)
Q Consensus 362 ~Dl~a~Id~L~~---~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P----~~~~V~~lVllap~~~~ 419 (601)
+|+.++++++.. +++++..+++++|+|+||++++.++.+.. .+.+++++|++.|..+.
T Consensus 133 ~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 133 EEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred HHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 666677776654 35666679999999999999999987532 02578899999887654
No 91
>PRK10115 protease 2; Provisional
Probab=99.26 E-value=2.3e-10 Score=131.32 Aligned_cols=56 Identities=14% Similarity=0.195 Sum_probs=48.6
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDY 419 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~ 419 (601)
+|+.+++++|..+--.++.++.+.|.|.||.++..++.++| +.++++|+..|..+.
T Consensus 506 ~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~P--dlf~A~v~~vp~~D~ 561 (686)
T PRK10115 506 NDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRP--ELFHGVIAQVPFVDV 561 (686)
T ss_pred HHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcCh--hheeEEEecCCchhH
Confidence 89999999998773345679999999999999999999965 999999999888665
No 92
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.20 E-value=4.1e-10 Score=111.32 Aligned_cols=125 Identities=24% Similarity=0.298 Sum_probs=83.7
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccChhhhcCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 441 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~~~~~g~ 441 (601)
+-+.++|+...+ .+++..+++|+|+|+||++++.++.++| ..+.++|++++........
T Consensus 88 ~~l~~li~~~~~-~~i~~~ri~l~GFSQGa~~al~~~l~~p--~~~~gvv~lsG~~~~~~~~------------------ 146 (216)
T PF02230_consen 88 ERLDELIDEEVA-YGIDPSRIFLGGFSQGAAMALYLALRYP--EPLAGVVALSGYLPPESEL------------------ 146 (216)
T ss_dssp HHHHHHHHHHHH-TT--GGGEEEEEETHHHHHHHHHHHCTS--STSSEEEEES---TTGCCC------------------
T ss_pred HHHHHHHHHHHH-cCCChhheehhhhhhHHHHHHHHHHHcC--cCcCEEEEeeccccccccc------------------
Confidence 444555555443 3466679999999999999999999966 8999999999864321100
Q ss_pred CccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCcccccc
Q 007502 442 PVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKD 521 (601)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~ 521 (601)
..
T Consensus 147 ------------------------------------------------------------------------------~~ 148 (216)
T PF02230_consen 147 ------------------------------------------------------------------------------ED 148 (216)
T ss_dssp ------------------------------------------------------------------------------HC
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred ccCCC-CCCEEEEEeCCCCCCCHHHHHHHHHHCCCC--ceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 007502 522 HIHKC-NIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 597 (601)
Q Consensus 522 ~L~~I-~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~--~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~ 597 (601)
..... ++|++++||++|+++|.+.++...+.+.+. +++++.+ +..+|. -..+..+.+.+||+++
T Consensus 149 ~~~~~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~-----~g~gH~-------i~~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 149 RPEALAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEY-----PGGGHE-------ISPEELRDLREFLEKH 215 (216)
T ss_dssp CHCCCCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEE-----TT-SSS---------HHHHHHHHHHHHHH
T ss_pred cccccCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEc-----CCCCCC-------CCHHHHHHHHHHHhhh
Confidence 00111 589999999999999999888888777654 4577887 456774 3366778899999875
No 93
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.17 E-value=3.1e-10 Score=116.33 Aligned_cols=56 Identities=32% Similarity=0.351 Sum_probs=46.8
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYT 420 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~ 420 (601)
+|..++|+++..+ ...+.+|.++|.|++|..++.+|+.. ++.+++++...+..+..
T Consensus 84 ~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~--~p~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 84 QDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARR--PPHLKAIVPQSGWSDLY 139 (272)
T ss_dssp HHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT---TTEEEEEEESE-SBTC
T ss_pred HHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcC--CCCceEEEecccCCccc
Confidence 8999999999888 44446999999999999999999974 58999999998876653
No 94
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.15 E-value=2.5e-10 Score=122.98 Aligned_cols=56 Identities=14% Similarity=0.113 Sum_probs=47.3
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDY 419 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~ 419 (601)
+++.++|++|....+.+.++++||||||||.+|..++.++| .+|.++++++|+...
T Consensus 101 ~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p--~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 101 KDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTK--HKVNRITGLDPAGPT 156 (442)
T ss_pred HHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCC--cceeEEEEEcCCCCc
Confidence 78888888887666654569999999999999999998855 899999999987543
No 95
>COG0400 Predicted esterase [General function prediction only]
Probab=99.13 E-value=1.4e-09 Score=106.11 Aligned_cols=123 Identities=15% Similarity=0.178 Sum_probs=92.9
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccChhhhcCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 441 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~~~~~g~ 441 (601)
..+.++++.+..+++++.++++++|+|.|+++++.+..++| ..++++|++++...+....
T Consensus 81 ~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~--~~~~~ail~~g~~~~~~~~------------------ 140 (207)
T COG0400 81 EKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLP--GLFAGAILFSGMLPLEPEL------------------ 140 (207)
T ss_pred HHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCc--hhhccchhcCCcCCCCCcc------------------
Confidence 66677788888888988789999999999999999999965 8999999988875432100
Q ss_pred CccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCcccccc
Q 007502 442 PVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKD 521 (601)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~ 521 (601)
T Consensus 141 -------------------------------------------------------------------------------- 140 (207)
T COG0400 141 -------------------------------------------------------------------------------- 140 (207)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCC--ceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 007502 522 HIHKCNIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 597 (601)
Q Consensus 522 ~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~--~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~ 597 (601)
.-..-..|||++||+.|++||...+.++.+.+.+. ++++..+ ..+|. -+.+..+.+..|+.+.
T Consensus 141 ~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~------~~GH~-------i~~e~~~~~~~wl~~~ 205 (207)
T COG0400 141 LPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWH------EGGHE-------IPPEELEAARSWLANT 205 (207)
T ss_pred ccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEe------cCCCc-------CCHHHHHHHHHHHHhc
Confidence 00011379999999999999999888887766543 4455554 36774 4466778888898764
No 96
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.13 E-value=5e-09 Score=121.32 Aligned_cols=72 Identities=15% Similarity=0.111 Sum_probs=51.4
Q ss_pred ccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCC--CceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 007502 518 FYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPE--DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 595 (601)
Q Consensus 518 d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~--~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~ 595 (601)
++...+.+|++|+|+|+|..|..++++.+.++++.+.. ..+++.+ +.++|... ....+.++.+.+.+||+
T Consensus 446 n~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l------~~g~H~~~--~~~~~~d~~e~~~~Wfd 517 (767)
T PRK05371 446 NYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFL------HQGGHVYP--NNWQSIDFRDTMNAWFT 517 (767)
T ss_pred CHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEE------eCCCccCC--CchhHHHHHHHHHHHHH
Confidence 45567889999999999999999999988888887753 2345544 24455421 11134677888899997
Q ss_pred hh
Q 007502 596 RY 597 (601)
Q Consensus 596 ~~ 597 (601)
++
T Consensus 518 ~~ 519 (767)
T PRK05371 518 HK 519 (767)
T ss_pred hc
Confidence 76
No 97
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.12 E-value=1.7e-10 Score=118.36 Aligned_cols=56 Identities=16% Similarity=0.217 Sum_probs=47.5
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDY 419 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~ 419 (601)
+++..+++.+....+.+.++++||||||||.+|..++.++| ++|+++|+++|+...
T Consensus 94 ~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~--~~v~~iv~LDPa~p~ 149 (275)
T cd00707 94 AELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLN--GKLGRITGLDPAGPL 149 (275)
T ss_pred HHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhc--CccceeEEecCCccc
Confidence 78888888887765555468999999999999999999965 799999999987654
No 98
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.07 E-value=9.1e-09 Score=100.83 Aligned_cols=64 Identities=20% Similarity=0.187 Sum_probs=48.9
Q ss_pred CCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 007502 524 HKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 597 (601)
Q Consensus 524 ~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~ 597 (601)
..+.||+.++.|++|..+..+....+.+...+ ..++.++ .++|+= -.+..+++...|.+.+..+
T Consensus 173 ~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~-~f~l~~f------dGgHFf---l~~~~~~v~~~i~~~l~~~ 236 (244)
T COG3208 173 APLACPIHAFGGEKDHEVSRDELGAWREHTKG-DFTLRVF------DGGHFF---LNQQREEVLARLEQHLAHH 236 (244)
T ss_pred CCcCcceEEeccCcchhccHHHHHHHHHhhcC-CceEEEe------cCccee---hhhhHHHHHHHHHHHhhhh
Confidence 57889999999999999999999988888764 4577776 455531 1236678888888888643
No 99
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.06 E-value=2.8e-10 Score=93.84 Aligned_cols=59 Identities=24% Similarity=0.474 Sum_probs=52.8
Q ss_pred CeEEEEEEeCCCCCCCCCCCcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCCCCCCCCCC
Q 007502 91 DWRLALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGLSVR 157 (601)
Q Consensus 91 ~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~rg~g~S~~ 157 (601)
|.+|...+|.|+.. .+..|+++||++.++..|. .+|+.|+++||.|+++|+||||+|..
T Consensus 1 G~~L~~~~w~p~~~---~k~~v~i~HG~~eh~~ry~-----~~a~~L~~~G~~V~~~D~rGhG~S~g 59 (79)
T PF12146_consen 1 GTKLFYRRWKPENP---PKAVVVIVHGFGEHSGRYA-----HLAEFLAEQGYAVFAYDHRGHGRSEG 59 (79)
T ss_pred CcEEEEEEecCCCC---CCEEEEEeCCcHHHHHHHH-----HHHHHHHhCCCEEEEECCCcCCCCCC
Confidence 56889999988854 3678999999999999885 89999999999999999999999985
No 100
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.01 E-value=2.3e-09 Score=109.09 Aligned_cols=60 Identities=22% Similarity=0.321 Sum_probs=44.3
Q ss_pred hhHHHHHHHHHHHcCC--CCCcEEEEEEchhHHHHHHHHHhCC---CccccceeEEEccCCCCCC
Q 007502 362 EDVPAAMEYIRAQSKP--KDGKLLAIGHSMGGILLYAMLSRCG---RESRLAAIVTLASSLDYTS 421 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~--~~~kv~LVGHSmGG~IAl~~Aa~~P---~~~~V~~lVllap~~~~~~ 421 (601)
+|+.++|++|+...+- ..++|+|+|||-|+.-++.|+.... ....|+++|+.+|..+...
T Consensus 88 ~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa 152 (303)
T PF08538_consen 88 EEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREA 152 (303)
T ss_dssp HHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTS
T ss_pred HHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhH
Confidence 9999999999988421 2359999999999999999998853 1367999999999877644
No 101
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.01 E-value=5e-10 Score=116.63 Aligned_cols=54 Identities=19% Similarity=0.301 Sum_probs=42.1
Q ss_pred hhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccC
Q 007502 360 LEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASS 416 (601)
Q Consensus 360 a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~ 416 (601)
...|...++|+|..+..++.++|.++|+||||..++.+++. +++|++.|+.+..
T Consensus 206 ~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaAL---DdRIka~v~~~~l 259 (390)
T PF12715_consen 206 MAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAAL---DDRIKATVANGYL 259 (390)
T ss_dssp HHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH----TT--EEEEES-B
T ss_pred HHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHc---chhhHhHhhhhhh
Confidence 34666679999999877777899999999999999999998 6899988887654
No 102
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.00 E-value=1.4e-09 Score=124.05 Aligned_cols=45 Identities=16% Similarity=0.095 Sum_probs=40.5
Q ss_pred CCcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCCCCCCCCCCC
Q 007502 109 NHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGLSVRG 158 (601)
Q Consensus 109 ~~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~rg~g~S~~~ 158 (601)
.++|||+||++.+...|. .++++|+++||.|+++|+||||.|...
T Consensus 449 ~P~VVllHG~~g~~~~~~-----~lA~~La~~Gy~VIaiDlpGHG~S~~~ 493 (792)
T TIGR03502 449 WPVVIYQHGITGAKENAL-----AFAGTLAAAGVATIAIDHPLHGARSFD 493 (792)
T ss_pred CcEEEEeCCCCCCHHHHH-----HHHHHHHhCCcEEEEeCCCCCCccccc
Confidence 358999999999998885 799999999999999999999999764
No 103
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.89 E-value=5.2e-08 Score=96.10 Aligned_cols=53 Identities=17% Similarity=0.312 Sum_probs=47.3
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASS 416 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~ 416 (601)
..+.++|+++..+++++..+|++.|+|.||+++..++..|| +.+.++.++++.
T Consensus 79 ~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~p--d~faa~a~~sG~ 131 (220)
T PF10503_consen 79 AFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYP--DLFAAVAVVSGV 131 (220)
T ss_pred hhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCC--ccceEEEeeccc
Confidence 56778899999999999899999999999999999999976 999998877764
No 104
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.88 E-value=9.7e-09 Score=98.75 Aligned_cols=172 Identities=18% Similarity=0.269 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHHcCCeeccccccchhhhhh-----hcHHHHHhcccceeeeCCCchhhhhhhHHHHHHHHHHHcCCCCC
Q 007502 306 IRDLSQNLVNMIEEGQLSVSPQLFDLQERLF-----STIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDG 380 (601)
Q Consensus 306 ~~~la~~l~~la~~Gy~viaPdl~~~~~~l~-----~~~~~~~~~~~~l~~~d~s~~~~a~~Dl~a~Id~L~~~~g~~~~ 380 (601)
+|..|+++ +.+||.|+.||++.- +++. ...+.|.+.. +.+-. ..|+..++++|+.+ |. ..
T Consensus 56 ~r~~Adk~---A~~Gy~v~vPD~~~G-dp~~~~~~~~~~~~w~~~~--------~~~~~-~~~i~~v~k~lk~~-g~-~k 120 (242)
T KOG3043|consen 56 TREGADKV---ALNGYTVLVPDFFRG-DPWSPSLQKSERPEWMKGH--------SPPKI-WKDITAVVKWLKNH-GD-SK 120 (242)
T ss_pred HHHHHHHH---hcCCcEEEcchhhcC-CCCCCCCChhhhHHHHhcC--------Ccccc-hhHHHHHHHHHHHc-CC-cc
Confidence 78888888 999999999999874 2221 2344555532 23333 38999999999966 32 35
Q ss_pred cEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccChhhhcCCCccchHHHHHHhcCCCCCc
Q 007502 381 KLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSP 460 (601)
Q Consensus 381 kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 460 (601)
+|.++|+||||.++..+.... ..+.++|..=|...
T Consensus 121 kIGv~GfCwGak~vv~~~~~~---~~f~a~v~~hps~~------------------------------------------ 155 (242)
T KOG3043|consen 121 KIGVVGFCWGAKVVVTLSAKD---PEFDAGVSFHPSFV------------------------------------------ 155 (242)
T ss_pred eeeEEEEeecceEEEEeeccc---hhheeeeEecCCcC------------------------------------------
Confidence 899999999999998887762 26666665443210
Q ss_pred hhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCccccccccCCCCCCEEEEEeCCCCC
Q 007502 461 PYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLI 540 (601)
Q Consensus 461 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~L~~I~vPVLII~Ge~D~i 540 (601)
+ ..+..++++|||++.|+.|.+
T Consensus 156 ---------------------------------------------------------d-~~D~~~vk~Pilfl~ae~D~~ 177 (242)
T KOG3043|consen 156 ---------------------------------------------------------D-SADIANVKAPILFLFAELDED 177 (242)
T ss_pred ---------------------------------------------------------C-hhHHhcCCCCEEEEeeccccc
Confidence 0 234567889999999999999
Q ss_pred CCHHHHHHHHHHCCCCce---EEEEecCCCCCCC-Cc--cccccc---ccchhhHHHHHHHHHhhhc
Q 007502 541 CPPEAVEETVKLLPEDLV---TYKVFGEPSGPHY-AH--YDLVGG---RMAVEQVYPCIVQFLGRYD 598 (601)
Q Consensus 541 Vp~e~~~~l~~~lp~~~~---~l~vi~~~~~~h~-gH--~dfi~g---~~~pe~v~~~I~eFL~~~~ 598 (601)
+|++....+.+.+.+..+ .++++ ++.+|. .| .+ +.. ....++.++.++.||+++.
T Consensus 178 ~p~~~v~~~ee~lk~~~~~~~~v~~f--~g~~HGf~~~r~~-~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 178 VPPKDVKAWEEKLKENPAVGSQVKTF--SGVGHGFVARRAN-ISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred CCHHHHHHHHHHHhcCcccceeEEEc--CCccchhhhhccC-CCChhHHHHHHHHHHHHHHHHHHhh
Confidence 999998888877765433 46666 222221 11 11 111 2235788999999998864
No 105
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.88 E-value=5.4e-08 Score=112.52 Aligned_cols=156 Identities=18% Similarity=0.178 Sum_probs=100.6
Q ss_pred hhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccChhhhcC
Q 007502 361 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALN 440 (601)
Q Consensus 361 ~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~~~~~g 440 (601)
.+|...+++++.+..-++..++.++|+|.||.+++.++...| ..-++..+.++|..+..-...
T Consensus 589 v~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~-~~~fkcgvavaPVtd~~~yds---------------- 651 (755)
T KOG2100|consen 589 VKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDP-GDVFKCGVAVAPVTDWLYYDS---------------- 651 (755)
T ss_pred hHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCc-CceEEEEEEecceeeeeeecc----------------
Confidence 388888888888877667789999999999999999999954 355666699999876531100
Q ss_pred CCccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCccccc
Q 007502 441 VPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYK 520 (601)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~ 520 (601)
. +..+++. .+......+... ...
T Consensus 652 ------------~--------~terymg------------------------~p~~~~~~y~e~-------------~~~ 674 (755)
T KOG2100|consen 652 ------------T--------YTERYMG------------------------LPSENDKGYEES-------------SVS 674 (755)
T ss_pred ------------c--------ccHhhcC------------------------CCccccchhhhc-------------ccc
Confidence 0 0001100 000000000000 112
Q ss_pred cccCCCCCCE-EEEEeCCCCCCCHHHHHHHHHHCCCCce--EEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 007502 521 DHIHKCNIPI-LAIAGDQDLICPPEAVEETVKLLPEDLV--TYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 597 (601)
Q Consensus 521 ~~L~~I~vPV-LII~Ge~D~iVp~e~~~~l~~~lp~~~~--~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~ 597 (601)
..+..++.|. |+|||+.|.-|+.+.+.++.+.+....+ ++.++ ++..|.- ...+.-..++..+..|+..+
T Consensus 675 ~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vy-----pde~H~i--s~~~~~~~~~~~~~~~~~~~ 747 (755)
T KOG2100|consen 675 SPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVY-----PDENHGI--SYVEVISHLYEKLDRFLRDC 747 (755)
T ss_pred chhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEe-----CCCCccc--ccccchHHHHHHHHHHHHHH
Confidence 3455566666 9999999999999999999988765543 45556 6666652 22234477888999998854
No 106
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.88 E-value=6.3e-08 Score=95.97 Aligned_cols=38 Identities=26% Similarity=0.472 Sum_probs=34.8
Q ss_pred cEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCCCCCC
Q 007502 111 PLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAG 153 (601)
Q Consensus 111 p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~rg~g 153 (601)
||+|+||.++++..|. .||+.|..+++.||.++.+|.+
T Consensus 2 ~lf~~p~~gG~~~~y~-----~la~~l~~~~~~v~~i~~~~~~ 39 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYR-----PLARALPDDVIGVYGIEYPGRG 39 (229)
T ss_dssp EEEEESSTTCSGGGGH-----HHHHHHTTTEEEEEEECSTTSC
T ss_pred eEEEEcCCccCHHHHH-----HHHHhCCCCeEEEEEEecCCCC
Confidence 7999999999999884 8999998777999999999998
No 107
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.88 E-value=4.5e-08 Score=95.81 Aligned_cols=61 Identities=25% Similarity=0.328 Sum_probs=48.2
Q ss_pred hhhhhhHHHHHHHHHHH---cCCCCCcEEEEEEchhHHHHHHHHHhCC--CccccceeEEEccCCCC
Q 007502 358 HYLEEDVPAAMEYIRAQ---SKPKDGKLLAIGHSMGGILLYAMLSRCG--RESRLAAIVTLASSLDY 419 (601)
Q Consensus 358 ~~a~~Dl~a~Id~L~~~---~g~~~~kv~LVGHSmGG~IAl~~Aa~~P--~~~~V~~lVllap~~~~ 419 (601)
+.. +|+.++++++.+. ++.+.++++|+|+|-||.+++.++.+.. ....++++++++|..+.
T Consensus 47 ~~~-~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 47 AAL-EDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp HHH-HHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred ccc-cccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 444 8999999998887 4555679999999999999999997643 11358999999997654
No 108
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.85 E-value=6.2e-07 Score=90.69 Aligned_cols=196 Identities=12% Similarity=0.095 Sum_probs=115.3
Q ss_pred CchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccC
Q 007502 355 DFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLAD 434 (601)
Q Consensus 355 s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~ 434 (601)
++++++ +++..+++++..+ .++-+|--.|++|..++|..|| ++|.++|++++........+.....
T Consensus 81 smd~LA-e~l~~Vl~~f~lk------~vIg~GvGAGAnIL~rfAl~~p--~~V~GLiLvn~~~~~~gw~Ew~~~K----- 146 (283)
T PF03096_consen 81 SMDQLA-EMLPEVLDHFGLK------SVIGFGVGAGANILARFALKHP--ERVLGLILVNPTCTAAGWMEWFYQK----- 146 (283)
T ss_dssp -HHHHH-CTHHHHHHHHT---------EEEEEETHHHHHHHHHHHHSG--GGEEEEEEES---S---HHHHHHHH-----
T ss_pred CHHHHH-HHHHHHHHhCCcc------EEEEEeeccchhhhhhccccCc--cceeEEEEEecCCCCccHHHHHHHH-----
Confidence 466777 8888888888544 7999999999999999999976 9999999999876554432222110
Q ss_pred hhhhcCCCccchHHHHHHhcCCCCCchhHHHH-Hhhhcccccc-CCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCccc
Q 007502 435 PAQALNVPVVPLGALLTAAYPLSSSPPYVFSW-LNNLISAEDM-MHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRD 512 (601)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 512 (601)
+....+......+.+.+. +...++.... ...+.+..+........+...+..+++.+...
T Consensus 147 --------------~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R---- 208 (283)
T PF03096_consen 147 --------------LSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSR---- 208 (283)
T ss_dssp --------------HH-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----
T ss_pred --------------HhcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc----
Confidence 010011111111122121 2222222211 24455555555555567778888888877632
Q ss_pred CCCccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHH
Q 007502 513 RGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQ 592 (601)
Q Consensus 513 ~~~~~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~e 592 (601)
.|.....+...||+|++.|+..+.+ +.+.++...+...+.++..+ +.++...-.| +|+++.+.+.=
T Consensus 209 ----~DL~~~~~~~~c~vLlvvG~~Sp~~--~~vv~~ns~Ldp~~ttllkv--~dcGglV~eE------qP~klaea~~l 274 (283)
T PF03096_consen 209 ----TDLSIERPSLGCPVLLVVGDNSPHV--DDVVEMNSKLDPTKTTLLKV--ADCGGLVLEE------QPGKLAEAFKL 274 (283)
T ss_dssp --------SECTTCCS-EEEEEETTSTTH--HHHHHHHHHS-CCCEEEEEE--TT-TT-HHHH-------HHHHHHHHHH
T ss_pred ----ccchhhcCCCCCCeEEEEecCCcch--hhHHHHHhhcCcccceEEEe--cccCCccccc------CcHHHHHHHHH
Confidence 2455566777899999999999875 67788998887666667766 5555555544 89999999999
Q ss_pred HHhh
Q 007502 593 FLGR 596 (601)
Q Consensus 593 FL~~ 596 (601)
||+.
T Consensus 275 FlQG 278 (283)
T PF03096_consen 275 FLQG 278 (283)
T ss_dssp HHHH
T ss_pred HHcc
Confidence 9975
No 109
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.83 E-value=4.1e-07 Score=91.07 Aligned_cols=46 Identities=9% Similarity=0.077 Sum_probs=39.1
Q ss_pred CCcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCCCCCCCCCCCC
Q 007502 109 NHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGLSVRGS 159 (601)
Q Consensus 109 ~~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~rg~g~S~~~~ 159 (601)
.+.||=+||-.++...|. -++..|.+.|++++.++++|+|.+..+.
T Consensus 35 ~gTVv~~hGsPGSH~DFk-----Yi~~~l~~~~iR~I~iN~PGf~~t~~~~ 80 (297)
T PF06342_consen 35 LGTVVAFHGSPGSHNDFK-----YIRPPLDEAGIRFIGINYPGFGFTPGYP 80 (297)
T ss_pred ceeEEEecCCCCCccchh-----hhhhHHHHcCeEEEEeCCCCCCCCCCCc
Confidence 457999999998887664 4778899999999999999999888764
No 110
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.80 E-value=6.5e-08 Score=97.56 Aligned_cols=59 Identities=25% Similarity=0.411 Sum_probs=45.7
Q ss_pred hhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCC---CccccceeEEEccCCCC
Q 007502 358 HYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCG---RESRLAAIVTLASSLDY 419 (601)
Q Consensus 358 ~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P---~~~~V~~lVllap~~~~ 419 (601)
..+ .-+..++.+|++++++. ++.+|||||||+.++.|+..+. .-++|.++|+|+++...
T Consensus 84 ~qa-~wl~~vl~~L~~~Y~~~--~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng 145 (255)
T PF06028_consen 84 KQA-KWLKKVLKYLKKKYHFK--KFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNG 145 (255)
T ss_dssp HHH-HHHHHHHHHHHHCC--S--EEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTT
T ss_pred HHH-HHHHHHHHHHHHhcCCC--EEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCc
Confidence 444 77888999999999886 9999999999999999999875 12378999999987554
No 111
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.71 E-value=3.2e-07 Score=98.25 Aligned_cols=40 Identities=20% Similarity=0.375 Sum_probs=26.5
Q ss_pred CCCcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCCCCC
Q 007502 108 RNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGA 152 (601)
Q Consensus 108 ~~~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~rg~ 152 (601)
+-|.|||.||++++...| +.++..||++||=|.++|+|..
T Consensus 99 ~~PvvIFSHGlgg~R~~y-----S~~~~eLAS~GyVV~aieHrDg 138 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSY-----SAICGELASHGYVVAAIEHRDG 138 (379)
T ss_dssp -EEEEEEE--TT--TTTT-----HHHHHHHHHTT-EEEEE---SS
T ss_pred CCCEEEEeCCCCcchhhH-----HHHHHHHHhCCeEEEEeccCCC
Confidence 345677899999999888 4899999999999999999953
No 112
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.71 E-value=9.1e-07 Score=90.35 Aligned_cols=65 Identities=20% Similarity=0.345 Sum_probs=45.6
Q ss_pred CCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCC-CccccceeEEEccCCCC
Q 007502 354 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCG-RESRLAAIVTLASSLDY 419 (601)
Q Consensus 354 ~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P-~~~~V~~lVllap~~~~ 419 (601)
|++++-+ +-..++|+.+....+.+..+++|+|||+|+.+++.++.+.+ ...+|.+++++.|.+..
T Consensus 59 ~sL~~QI-~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 59 FSLQDQI-EHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred cCHHHHH-HHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 3344443 55555555555442212358999999999999999999954 34789999999998643
No 113
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.70 E-value=7.1e-07 Score=86.01 Aligned_cols=34 Identities=29% Similarity=0.504 Sum_probs=28.9
Q ss_pred cEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCC
Q 007502 381 KLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDY 419 (601)
Q Consensus 381 kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~ 419 (601)
.+.|||.||||..|..++.+++ +++ |+++|.+.+
T Consensus 60 ~~~liGSSlGG~~A~~La~~~~----~~a-vLiNPav~p 93 (187)
T PF05728_consen 60 NVVLIGSSLGGFYATYLAERYG----LPA-VLINPAVRP 93 (187)
T ss_pred CeEEEEEChHHHHHHHHHHHhC----CCE-EEEcCCCCH
Confidence 5999999999999999998854 555 899998765
No 114
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.70 E-value=1.7e-06 Score=89.57 Aligned_cols=51 Identities=22% Similarity=0.164 Sum_probs=42.2
Q ss_pred hhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccC
Q 007502 361 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASS 416 (601)
Q Consensus 361 ~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~ 416 (601)
+.+...++++++.+ |+. ++.+.|.||||.+|...++..| ..|..+-++++.
T Consensus 159 i~E~~~Ll~Wl~~~-G~~--~~g~~G~SmGG~~A~laa~~~p--~pv~~vp~ls~~ 209 (348)
T PF09752_consen 159 ILESRALLHWLERE-GYG--PLGLTGISMGGHMAALAASNWP--RPVALVPCLSWS 209 (348)
T ss_pred HHHHHHHHHHHHhc-CCC--ceEEEEechhHhhHHhhhhcCC--CceeEEEeeccc
Confidence 38888999999998 775 9999999999999999999966 666666555543
No 115
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.66 E-value=1.3e-06 Score=87.53 Aligned_cols=38 Identities=32% Similarity=0.420 Sum_probs=31.9
Q ss_pred CcEEEEEEchhHHHHHHHHHhCC---CccccceeEEEccCC
Q 007502 380 GKLLAIGHSMGGILLYAMLSRCG---RESRLAAIVTLASSL 417 (601)
Q Consensus 380 ~kv~LVGHSmGG~IAl~~Aa~~P---~~~~V~~lVllap~~ 417 (601)
.++.|.|||-||-+++.++..+. ...+++++|+++|.-
T Consensus 91 s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 91 SKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred cceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 48999999999999999998841 135899999999874
No 116
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.66 E-value=3.7e-07 Score=86.88 Aligned_cols=35 Identities=17% Similarity=0.316 Sum_probs=29.7
Q ss_pred CcEEEEEEchhHHHHHHHH-HhCCCccccceeEEEccC
Q 007502 380 GKLLAIGHSMGGILLYAML-SRCGRESRLAAIVTLASS 416 (601)
Q Consensus 380 ~kv~LVGHSmGG~IAl~~A-a~~P~~~~V~~lVllap~ 416 (601)
++++|||||+|+..++.++ .. ...+|+++++++|+
T Consensus 55 ~~~ilVaHSLGc~~~l~~l~~~--~~~~v~g~lLVAp~ 90 (171)
T PF06821_consen 55 EPTILVAHSLGCLTALRWLAEQ--SQKKVAGALLVAPF 90 (171)
T ss_dssp TTEEEEEETHHHHHHHHHHHHT--CCSSEEEEEEES--
T ss_pred CCeEEEEeCHHHHHHHHHHhhc--ccccccEEEEEcCC
Confidence 4799999999999999999 55 36899999999987
No 117
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.66 E-value=1.5e-06 Score=90.75 Aligned_cols=60 Identities=32% Similarity=0.332 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHHH---cCCCCCcEEEEEEchhHHHHHHHHHhCCC--ccccceeEEEccCCCCCC
Q 007502 362 EDVPAAMEYIRAQ---SKPKDGKLLAIGHSMGGILLYAMLSRCGR--ESRLAAIVTLASSLDYTS 421 (601)
Q Consensus 362 ~Dl~a~Id~L~~~---~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~--~~~V~~lVllap~~~~~~ 421 (601)
+|+.+++.++..+ +|.+.++|.++|+|-||.+++.++..... .....+.+++.|..+...
T Consensus 131 ~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 131 EDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred HHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 7788888888765 46777799999999999999999877320 125788899998877643
No 118
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.66 E-value=1.1e-05 Score=86.63 Aligned_cols=205 Identities=16% Similarity=0.166 Sum_probs=103.6
Q ss_pred hHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCC---chhHHHhhccccCh----
Q 007502 363 DVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTS---SKSTLKLLLPLADP---- 435 (601)
Q Consensus 363 Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~---~~~~l~~l~~l~~~---- 435 (601)
-..++++.+.....-. .|++|||.|+||..++.+|+.+| +.+.-+|+-++++++.. ...+++....+..-
T Consensus 124 ae~~Fv~~V~~~hp~~-~kp~liGnCQgGWa~~mlAA~~P--d~~gplvlaGaPlsywaG~~g~nPmRy~ggl~ggsw~~ 200 (581)
T PF11339_consen 124 AEAAFVEEVAERHPDA-PKPNLIGNCQGGWAAMMLAALRP--DLVGPLVLAGAPLSYWAGERGDNPMRYMGGLLGGSWLT 200 (581)
T ss_pred HHHHHHHHHHHhCCCC-CCceEEeccHHHHHHHHHHhcCc--CccCceeecCCCcccccCCCCCCcHHHhcCCCcchHHH
Confidence 3445566666653322 28999999999999999999976 89999999998887765 22223222211110
Q ss_pred --hhhcCCCccchHHHHHHhcCCCC-CchhHHHHHhhhccccccCCHH-----HHHHHHHhhcCCCcHHHHHHHHHHH-H
Q 007502 436 --AQALNVPVVPLGALLTAAYPLSS-SPPYVFSWLNNLISAEDMMHPE-----LLKKLVLNNFCTIPAKLILQLTTAF-R 506 (601)
Q Consensus 436 --~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~-~ 506 (601)
..-+|-..+. +.++-.-+.... ...++.+.+ ......+.+ .+++++ ..+...+...+......+ .
T Consensus 201 ~l~sDlG~G~fd-Ga~lv~nFe~lnPa~~~w~K~y----~Ly~~iD~e~~Rfl~FErWw-gg~~~l~~~ei~~Iv~nLFv 274 (581)
T PF11339_consen 201 ALVSDLGNGRFD-GAWLVQNFENLNPANTYWSKYY----DLYANIDTERERFLEFERWW-GGFYDLNGEEILWIVENLFV 274 (581)
T ss_pred HHHHHcCCCccC-cHHHHhhhhccChhHHHHHHHH----HHHhccCCchhhhhHHHHHh-CCccCCCHHHHHHHHHHHhc
Confidence 0011111111 111111111111 111111111 111111211 122222 223345566666666443 3
Q ss_pred cCCcccCCCc--cccccccCCCCCCEEEEEeCCCCCCCHHHHHH-HHHHCCC------CceEEEEecCCCCCCCCccccc
Q 007502 507 EGGLRDRGGK--FFYKDHIHKCNIPILAIAGDQDLICPPEAVEE-TVKLLPE------DLVTYKVFGEPSGPHYAHYDLV 577 (601)
Q Consensus 507 ~~~~~~~~~~--~d~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~-l~~~lp~------~~~~l~vi~~~~~~h~gH~dfi 577 (601)
.+.+....-. ....-+|++|++|+.++.|..|.|+|++.+-. +.+.+++ ...+++.. -..+.||++.+
T Consensus 275 gNrL~~g~~~~~~G~~~DLr~Ir~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~---~h~~vGHLGIF 351 (581)
T PF11339_consen 275 GNRLAKGEFRVSDGRRVDLRNIRSPIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYL---LHESVGHLGIF 351 (581)
T ss_pred cchhccCceeccCCcEeehhhCCCCEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEE---ecCCCCceEEE
Confidence 3333221110 01234799999999999999999999997733 2233322 12132222 23578888855
Q ss_pred cc
Q 007502 578 GG 579 (601)
Q Consensus 578 ~g 579 (601)
.+
T Consensus 352 VS 353 (581)
T PF11339_consen 352 VS 353 (581)
T ss_pred ec
Confidence 54
No 119
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.65 E-value=1.6e-05 Score=79.71 Aligned_cols=196 Identities=12% Similarity=0.099 Sum_probs=118.9
Q ss_pred CchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccC
Q 007502 355 DFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLAD 434 (601)
Q Consensus 355 s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~ 434 (601)
++++.+ +++..+++++ +.+ .++-+|--.|+.|..++|..|| ++|.++|++++...-........
T Consensus 104 smd~LA-d~l~~VL~~f----~lk--~vIg~GvGAGAyIL~rFAl~hp--~rV~GLvLIn~~~~a~gwiew~~------- 167 (326)
T KOG2931|consen 104 SMDDLA-DMLPEVLDHF----GLK--SVIGMGVGAGAYILARFALNHP--ERVLGLVLINCDPCAKGWIEWAY------- 167 (326)
T ss_pred CHHHHH-HHHHHHHHhc----Ccc--eEEEecccccHHHHHHHHhcCh--hheeEEEEEecCCCCchHHHHHH-------
Confidence 456666 7777777776 443 7899999999999999999976 99999999997654332211100
Q ss_pred hhhhcCCCccchHHHHHHhcCCCCCchhHH-HHHhhhcccccc-CCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCccc
Q 007502 435 PAQALNVPVVPLGALLTAAYPLSSSPPYVF-SWLNNLISAEDM-MHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRD 512 (601)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 512 (601)
..+....+........+. ..+...++.... ...+.+..+....-.......+..++..+....
T Consensus 168 ------------~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~--- 232 (326)
T KOG2931|consen 168 ------------NKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRR--- 232 (326)
T ss_pred ------------HHHHHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCC---
Confidence 001111100111111111 122233333322 244555555555555566677777777665321
Q ss_pred CCCcccccccc----CCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHH
Q 007502 513 RGGKFFYKDHI----HKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYP 588 (601)
Q Consensus 513 ~~~~~d~~~~L----~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~ 588 (601)
|..... ..++||+|++.|++.+.+ +.+.++...+......+..+ ..++.....+ +|..+.+
T Consensus 233 -----DL~~~r~~~~~tlkc~vllvvGd~Sp~~--~~vv~~n~~Ldp~~ttllk~--~d~g~l~~e~------qP~kl~e 297 (326)
T KOG2931|consen 233 -----DLSIERPKLGTTLKCPVLLVVGDNSPHV--SAVVECNSKLDPTYTTLLKM--ADCGGLVQEE------QPGKLAE 297 (326)
T ss_pred -----CccccCCCcCccccccEEEEecCCCchh--hhhhhhhcccCcccceEEEE--cccCCccccc------CchHHHH
Confidence 222211 256799999999998875 56777777776554456665 5555555543 8999999
Q ss_pred HHHHHHhh
Q 007502 589 CIVQFLGR 596 (601)
Q Consensus 589 ~I~eFL~~ 596 (601)
.+.=|++.
T Consensus 298 a~~~FlqG 305 (326)
T KOG2931|consen 298 AFKYFLQG 305 (326)
T ss_pred HHHHHHcc
Confidence 99999874
No 120
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.63 E-value=3.1e-06 Score=88.56 Aligned_cols=60 Identities=15% Similarity=0.261 Sum_probs=45.6
Q ss_pred hhHHHHHHHHHHH----cCCCCCcEEEEEEchhHHHHHHHHHhCC----CccccceeEEEccCCCCCC
Q 007502 362 EDVPAAMEYIRAQ----SKPKDGKLLAIGHSMGGILLYAMLSRCG----RESRLAAIVTLASSLDYTS 421 (601)
Q Consensus 362 ~Dl~a~Id~L~~~----~g~~~~kv~LVGHSmGG~IAl~~Aa~~P----~~~~V~~lVllap~~~~~~ 421 (601)
+|...++.++.+. .+.+.++++|+|-|-||+||..++.+.- .+.++++.|++-|......
T Consensus 144 ~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 144 DDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred hHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCC
Confidence 6666666666553 4666679999999999999999987743 2467999999999866543
No 121
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.60 E-value=1.5e-07 Score=92.86 Aligned_cols=55 Identities=24% Similarity=0.347 Sum_probs=43.5
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDY 419 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~ 419 (601)
+-+..++++|+.+..++.++|.|+|.|.||-+|+.+|+.+| .|+++|+++|....
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~---~i~avVa~~ps~~~ 58 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP---QISAVVAISPSSVV 58 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS---SEEEEEEES--SB-
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC---CccEEEEeCCceeE
Confidence 44678899999887666679999999999999999999954 89999999987544
No 122
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.58 E-value=4.5e-07 Score=94.16 Aligned_cols=58 Identities=19% Similarity=0.149 Sum_probs=47.3
Q ss_pred CCeEEEEEEeCCCCCCC----CCCCcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCCCCC
Q 007502 90 CDWRLALWRYNPPPQAP----TRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGA 152 (601)
Q Consensus 90 ~~~~l~~~~~~p~~~~~----~~~~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~rg~ 152 (601)
.+-++.++.|.|..... ..-|.|+|-||.|.+..+|+ .+|++|++.||-|-++|++|.
T Consensus 48 r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~~f~-----~~A~~lAs~Gf~Va~~~hpgs 109 (365)
T COG4188 48 RDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVTGFA-----WLAEHLASYGFVVAAPDHPGS 109 (365)
T ss_pred cCCccccceeccCCCccccccCcCCeEEecCCCCCCccchh-----hhHHHHhhCceEEEeccCCCc
Confidence 56677888888876543 34567888999999988885 589999999999999999974
No 123
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.57 E-value=3.5e-07 Score=91.02 Aligned_cols=55 Identities=27% Similarity=0.484 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHc---CCCCCcEEEEEEchhHHHHHHHHHhCC-CccccceeEEEccCCC
Q 007502 364 VPAAMEYIRAQS---KPKDGKLLAIGHSMGGILLYAMLSRCG-RESRLAAIVTLASSLD 418 (601)
Q Consensus 364 l~a~Id~L~~~~---g~~~~kv~LVGHSmGG~IAl~~Aa~~P-~~~~V~~lVllap~~~ 418 (601)
+.+.++.+...+ ..+..+++||||||||.++-.++...+ .+..|+.+|.++++..
T Consensus 66 ~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 66 LAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHR 124 (225)
T ss_pred HHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCC
Confidence 344444444433 223469999999999999998887643 2357999999998754
No 124
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.57 E-value=6.7e-07 Score=85.10 Aligned_cols=56 Identities=27% Similarity=0.340 Sum_probs=48.0
Q ss_pred hhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCC--CccccceeEEEccC
Q 007502 358 HYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCG--RESRLAAIVTLASS 416 (601)
Q Consensus 358 ~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P--~~~~V~~lVllap~ 416 (601)
+.+ .|+..+|++...+.+.. +++|+|+|+|+-+.-....+.| ...+|+.++++++.
T Consensus 49 ~~a-~Dl~~~i~~y~~~w~~~--~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 49 QTA-ADLARIIRHYRARWGRK--RVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred HHH-HHHHHHHHHHHHHhCCc--eEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 444 99999999999997765 9999999999988888888877 45789999999875
No 125
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.55 E-value=3.8e-06 Score=91.37 Aligned_cols=53 Identities=19% Similarity=0.189 Sum_probs=42.3
Q ss_pred hhHHHHHHHHHHHcCC-CCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccC
Q 007502 362 EDVPAAMEYIRAQSKP-KDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASS 416 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~-~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~ 416 (601)
+|-.+.+++|..++|+ +-++|.+-|||.||.+++...+++| +-++..|.=+|.
T Consensus 708 eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P--~IfrvAIAGapV 761 (867)
T KOG2281|consen 708 EDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYP--NIFRVAIAGAPV 761 (867)
T ss_pred hhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCc--ceeeEEeccCcc
Confidence 7888888888888865 3468999999999999999999976 666655554443
No 126
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.45 E-value=4.4e-06 Score=91.79 Aligned_cols=55 Identities=24% Similarity=0.218 Sum_probs=43.5
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDY 419 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~ 419 (601)
+|-.+.|++|.++. .-..+|..+|-|++|...+.+|+..| +.+++++..++..+.
T Consensus 107 ~Dg~D~I~Wia~Qp-WsNG~Vgm~G~SY~g~tq~~~Aa~~p--PaLkai~p~~~~~D~ 161 (563)
T COG2936 107 EDGYDTIEWLAKQP-WSNGNVGMLGLSYLGFTQLAAAALQP--PALKAIAPTEGLVDR 161 (563)
T ss_pred cchhHHHHHHHhCC-ccCCeeeeecccHHHHHHHHHHhcCC--chheeeccccccccc
Confidence 66667777777752 22359999999999999999999954 889988888877663
No 127
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.39 E-value=6.8e-07 Score=88.10 Aligned_cols=36 Identities=25% Similarity=0.397 Sum_probs=30.3
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHh
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 400 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~ 400 (601)
.++.++|+.++..+|. ||.||||||||.++-.+..-
T Consensus 60 ~~l~~fI~~Vl~~TGa---kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 60 KQLRAFIDAVLAYTGA---KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp HHHHHHHHHHHHHHT-----EEEEEETCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCC---EEEEEEcCCcCHHHHHHHHH
Confidence 7888999999999885 89999999999999887754
No 128
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.35 E-value=5.3e-06 Score=81.90 Aligned_cols=40 Identities=23% Similarity=0.342 Sum_probs=32.8
Q ss_pred CcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCC
Q 007502 380 GKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDY 419 (601)
Q Consensus 380 ~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~ 419 (601)
.++.++|||.||-+|..+|..+...-++.++|-++|..+.
T Consensus 120 ~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 120 SKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred ceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 4899999999999999999886434568889988887543
No 129
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.32 E-value=2.1e-05 Score=76.04 Aligned_cols=62 Identities=21% Similarity=0.241 Sum_probs=48.9
Q ss_pred cCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 007502 523 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 597 (601)
Q Consensus 523 L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~ 597 (601)
...|++|.|-|.|+.|.++|...+..|++.++++ .+.. ...+|.- .+...+.+.|.+||+..
T Consensus 159 ~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a--~vl~------HpggH~V-----P~~~~~~~~i~~fi~~~ 220 (230)
T KOG2551|consen 159 KRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA--TVLE------HPGGHIV-----PNKAKYKEKIADFIQSF 220 (230)
T ss_pred ccCCCCCeeEEecccceeecchHHHHHHHhcCCC--eEEe------cCCCccC-----CCchHHHHHHHHHHHHH
Confidence 4568899999999999999999999999999986 3333 4566752 24467888888888764
No 130
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.25 E-value=2.8e-06 Score=83.80 Aligned_cols=40 Identities=28% Similarity=0.459 Sum_probs=28.0
Q ss_pred cCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEe
Q 007502 523 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVF 563 (601)
Q Consensus 523 L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi 563 (601)
-.+|++|+|-|+|++|.+++++.++.+++.+.+. .++...
T Consensus 157 ~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~-~~v~~h 196 (212)
T PF03959_consen 157 EPKISIPTLHVIGENDPVVPPERSEALAEMFDPD-ARVIEH 196 (212)
T ss_dssp -TT---EEEEEEETT-SSS-HHHHHHHHHHHHHH-EEEEEE
T ss_pred cccCCCCeEEEEeCCCCCcchHHHHHHHHhccCC-cEEEEE
Confidence 3457899999999999999999999999988763 355553
No 131
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.23 E-value=1.1e-05 Score=100.01 Aligned_cols=56 Identities=23% Similarity=0.269 Sum_probs=41.4
Q ss_pred CchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCC-CccccceeEEEccC
Q 007502 355 DFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCG-RESRLAAIVTLASS 416 (601)
Q Consensus 355 s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P-~~~~V~~lVllap~ 416 (601)
++++++ +++.+.++.+.. ..+++++||||||.+++.+|.+.+ .+.++..++++++.
T Consensus 1114 ~l~~la-~~~~~~i~~~~~-----~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1114 SLDEVC-EAHLATLLEQQP-----HGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred CHHHHH-HHHHHHHHhhCC-----CCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 455665 777777765421 238999999999999999998642 24789999988864
No 132
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.23 E-value=4.9e-05 Score=78.67 Aligned_cols=88 Identities=15% Similarity=0.117 Sum_probs=51.4
Q ss_pred HHHHcCCeeccccccchhhhhhhcHHHHHhcccceeeeCCCchhhhhhhHHHHHHHHHHHcCC-CCCcEEEEEEchhHHH
Q 007502 315 NMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKP-KDGKLLAIGHSMGGIL 393 (601)
Q Consensus 315 ~la~~Gy~viaPdl~~~~~~l~~~~~~~~~~~~~l~~~d~s~~~~a~~Dl~a~Id~L~~~~g~-~~~kv~LVGHSmGG~I 393 (601)
.+..+||.|++||..|.+..|... ...-+..-|...+...+....|. ...++.++|||.||.-
T Consensus 21 ~~L~~GyaVv~pDY~Glg~~y~~~----------------~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~A 84 (290)
T PF03583_consen 21 AWLARGYAVVAPDYEGLGTPYLNG----------------RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQA 84 (290)
T ss_pred HHHHCCCEEEecCCCCCCCcccCc----------------HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHH
Confidence 347999999999998876641110 01122223333333333332333 2358999999999999
Q ss_pred HHHHHHhCC--Ccc-c--cceeEEEccCCC
Q 007502 394 LYAMLSRCG--RES-R--LAAIVTLASSLD 418 (601)
Q Consensus 394 Al~~Aa~~P--~~~-~--V~~lVllap~~~ 418 (601)
++..+...+ .++ . |.+.++.+++.+
T Consensus 85 a~~AA~l~~~YApeL~~~l~Gaa~gg~~~d 114 (290)
T PF03583_consen 85 ALWAAELAPSYAPELNRDLVGAAAGGPPAD 114 (290)
T ss_pred HHHHHHHhHHhCcccccceeEEeccCCccC
Confidence 877664433 122 2 666666666544
No 133
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.21 E-value=4e-06 Score=91.12 Aligned_cols=60 Identities=22% Similarity=0.331 Sum_probs=47.7
Q ss_pred hhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCC--CccccceeEEEccCCCCC
Q 007502 358 HYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCG--RESRLAAIVTLASSLDYT 420 (601)
Q Consensus 358 ~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P--~~~~V~~lVllap~~~~~ 420 (601)
++. +++.++|+.+....+. .|++|+||||||.++..++..+| ....|+++|+++++..-.
T Consensus 143 ~~~-~~Lk~lIe~~~~~~g~--~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 143 ETM-DGLKKKLETVYKASGG--KKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HHH-HHHHHHHHHHHHHcCC--CCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCCCC
Confidence 444 8888888888877654 39999999999999999999876 224589999999875543
No 134
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.20 E-value=2.3e-05 Score=74.62 Aligned_cols=134 Identities=17% Similarity=0.221 Sum_probs=85.3
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCchhHHHhhccccChhhhcCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 441 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~~~~l~~l~~l~~~~~~~g~ 441 (601)
.|+...++++.+.+... +++.+-|||.|+.+++.+..+. ..++|.+++++++..+...
T Consensus 119 ~~~~~gv~filk~~~n~-k~l~~gGHSaGAHLa~qav~R~-r~prI~gl~l~~GvY~l~E-------------------- 176 (270)
T KOG4627|consen 119 TQFTHGVNFILKYTENT-KVLTFGGHSAGAHLAAQAVMRQ-RSPRIWGLILLCGVYDLRE-------------------- 176 (270)
T ss_pred HHHHHHHHHHHHhcccc-eeEEEcccchHHHHHHHHHHHh-cCchHHHHHHHhhHhhHHH--------------------
Confidence 66677777777765432 4688899999999999888774 3678999998886532210
Q ss_pred CccchHHHHHHhcCCCCCchhHHHHHhhhccccccCCHHHHHHHHHhhcCCCcHHHHHHHHHHHHcCCcccCCCcccccc
Q 007502 442 PVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKD 521 (601)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~ 521 (601)
.........-....+..+.. . .-..
T Consensus 177 ------------------------L~~te~g~dlgLt~~~ae~~------------------------------S-cdl~ 201 (270)
T KOG4627|consen 177 ------------------------LSNTESGNDLGLTERNAESV------------------------------S-CDLW 201 (270)
T ss_pred ------------------------HhCCccccccCcccchhhhc------------------------------C-ccHH
Confidence 00000000000000000000 0 0122
Q ss_pred ccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCccccccc
Q 007502 522 HIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGG 579 (601)
Q Consensus 522 ~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g 579 (601)
.+..+++|+|++.|++|.---.+..+.+..++.++ .+..+ ++++|++.+..
T Consensus 202 ~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a--~~~~f-----~n~~hy~I~~~ 252 (270)
T KOG4627|consen 202 EYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKA--SFTLF-----KNYDHYDIIEE 252 (270)
T ss_pred HhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhc--ceeec-----CCcchhhHHHH
Confidence 46678899999999999776678888898888876 77777 78888886653
No 135
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.20 E-value=4.9e-05 Score=69.70 Aligned_cols=37 Identities=24% Similarity=0.407 Sum_probs=30.8
Q ss_pred CcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCC
Q 007502 380 GKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLD 418 (601)
Q Consensus 380 ~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~ 418 (601)
.+.++-||||||-++.+++.. ....|+++++++=+..
T Consensus 89 gpLi~GGkSmGGR~aSmvade--~~A~i~~L~clgYPfh 125 (213)
T COG3571 89 GPLIIGGKSMGGRVASMVADE--LQAPIDGLVCLGYPFH 125 (213)
T ss_pred CceeeccccccchHHHHHHHh--hcCCcceEEEecCccC
Confidence 489999999999999999988 3466999999885433
No 136
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.18 E-value=3.4e-05 Score=77.30 Aligned_cols=54 Identities=19% Similarity=0.207 Sum_probs=44.8
Q ss_pred hhHHHHHH-HHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCC
Q 007502 362 EDVPAAME-YIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSL 417 (601)
Q Consensus 362 ~Dl~a~Id-~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~ 417 (601)
..+..+++ .+..+++++..+|+++|.|+||.-++.++.++| +.+++.+++++..
T Consensus 250 ~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfP--dfFAaa~~iaG~~ 304 (387)
T COG4099 250 IEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFP--DFFAAAVPIAGGG 304 (387)
T ss_pred HHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCc--hhhheeeeecCCC
Confidence 33444444 777788888889999999999999999999977 9999999998753
No 137
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.14 E-value=2.7e-05 Score=72.78 Aligned_cols=64 Identities=17% Similarity=0.161 Sum_probs=43.5
Q ss_pred CCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 007502 525 KCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 596 (601)
Q Consensus 525 ~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~ 596 (601)
.+.-|.+++..++|++++++.++.+.+..++. ++.+ ++.||.--=.|...-.+.+..+.+|+.+
T Consensus 115 ~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs~---lv~~-----g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 115 PLPFPSVVVASRNDPYVSYEHAEDLANAWGSA---LVDV-----GEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred cCCCceeEEEecCCCCCCHHHHHHHHHhccHh---heec-----ccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 34469999999999999999999999999864 5555 5555542212222334555566666544
No 138
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.12 E-value=2.6e-05 Score=78.71 Aligned_cols=40 Identities=23% Similarity=0.369 Sum_probs=34.6
Q ss_pred CcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCCCCCCC
Q 007502 110 HPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGL 154 (601)
Q Consensus 110 ~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~rg~g~ 154 (601)
|.||+.||+|++..-| +.++-.|++.||-|-++|+|.+--
T Consensus 119 PvvvFSHGLggsRt~Y-----Sa~c~~LAShG~VVaavEHRD~SA 158 (399)
T KOG3847|consen 119 PVVVFSHGLGGSRTLY-----SAYCTSLASHGFVVAAVEHRDRSA 158 (399)
T ss_pred cEEEEecccccchhhH-----HHHhhhHhhCceEEEEeecccCcc
Confidence 5577899999999888 478888999999999999997653
No 139
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.08 E-value=5.5e-05 Score=77.99 Aligned_cols=53 Identities=11% Similarity=0.081 Sum_probs=43.5
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLD 418 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~ 418 (601)
..++.++..|.-+.|.. ++++-|-.||+.|+..+|..+| +.|.++=+-.+...
T Consensus 213 ~a~ArvmrkLMlRLg~n--kffiqGgDwGSiI~snlasLyP--enV~GlHlnm~~~~ 265 (469)
T KOG2565|consen 213 AATARVMRKLMLRLGYN--KFFIQGGDWGSIIGSNLASLYP--ENVLGLHLNMCFVN 265 (469)
T ss_pred HHHHHHHHHHHHHhCcc--eeEeecCchHHHHHHHHHhhcc--hhhhHhhhcccccC
Confidence 44567778888888886 9999999999999999999977 88988766555443
No 140
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.99 E-value=0.00049 Score=71.85 Aligned_cols=69 Identities=22% Similarity=0.381 Sum_probs=50.2
Q ss_pred CCCcceEEEEeeCCCeEEEEEEeCCCCCCCCCCCcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCCCC
Q 007502 77 CSADELHYVSVANCDWRLALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRG 151 (601)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~rg 151 (601)
...+|+.+..+. ++--|+||+ |... .+..+.||+|||.|.++..-.+ -.++-+.|.+.|+.|+.+-++.
T Consensus 59 lp~~e~~~L~~~-~~~flaL~~--~~~~-~~~~G~vIilp~~g~~~d~p~~--i~~LR~~L~~~GW~Tlsit~P~ 127 (310)
T PF12048_consen 59 LPADEVQWLQAG-EERFLALWR--PANS-AKPQGAVIILPDWGEHPDWPGL--IAPLRRELPDHGWATLSITLPD 127 (310)
T ss_pred CCHhhcEEeecC-CEEEEEEEe--cccC-CCCceEEEEecCCCCCCCcHhH--HHHHHHHhhhcCceEEEecCCC
Confidence 345788888884 566677763 4422 2357889999999999843211 2468889999999999999987
No 141
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.98 E-value=0.00014 Score=71.53 Aligned_cols=59 Identities=29% Similarity=0.389 Sum_probs=49.3
Q ss_pred hhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCC---CccccceeEEEccCCC
Q 007502 357 DHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCG---RESRLAAIVTLASSLD 418 (601)
Q Consensus 357 ~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P---~~~~V~~lVllap~~~ 418 (601)
.++. .-+..++.+|+.+++++ ++.+|||||||.-...|+..+. .-+.++++|.++++..
T Consensus 116 ~~~s-~wlk~~msyL~~~Y~i~--k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 116 LDQS-KWLKKAMSYLQKHYNIP--KFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred hhHH-HHHHHHHHHHHHhcCCc--eeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 3443 66788999999999987 9999999999999999999876 2346899999998754
No 142
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.90 E-value=0.0001 Score=74.33 Aligned_cols=54 Identities=19% Similarity=0.174 Sum_probs=49.5
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSL 417 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~ 417 (601)
.++.++++.+..++++++++|++.|.|-||.++..++..+| +.+.++.++++..
T Consensus 126 gflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p--~~faa~A~VAg~~ 179 (312)
T COG3509 126 GFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYP--DIFAAIAPVAGLL 179 (312)
T ss_pred HHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCc--ccccceeeeeccc
Confidence 78899999999999999999999999999999999999976 8899888888765
No 143
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.88 E-value=9.2e-05 Score=70.84 Aligned_cols=73 Identities=18% Similarity=0.281 Sum_probs=52.8
Q ss_pred hcHHHHHhcccceeeeCCCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccC
Q 007502 337 STIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASS 416 (601)
Q Consensus 337 ~~~~~~~~~~~~l~~~d~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~ 416 (601)
.+.+.|.+ .|.+-+|+.+++.+.++.- ...++..++.+.||||||.=|+..+.+.| .+.+++-..+|.
T Consensus 108 At~epw~~--------~yrMYdYv~kELp~~l~~~--~~pld~~k~~IfGHSMGGhGAl~~~Lkn~--~kykSvSAFAPI 175 (283)
T KOG3101|consen 108 ATQEPWAK--------HYRMYDYVVKELPQLLNSA--NVPLDPLKVGIFGHSMGGHGALTIYLKNP--SKYKSVSAFAPI 175 (283)
T ss_pred cccchHhh--------hhhHHHHHHHHHHHHhccc--cccccchhcceeccccCCCceEEEEEcCc--ccccceeccccc
Confidence 45566665 4566677777777777632 12234458999999999999999999954 888888888887
Q ss_pred CCCCC
Q 007502 417 LDYTS 421 (601)
Q Consensus 417 ~~~~~ 421 (601)
+.+..
T Consensus 176 ~NP~~ 180 (283)
T KOG3101|consen 176 CNPIN 180 (283)
T ss_pred cCccc
Confidence 66644
No 144
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.79 E-value=7.6e-05 Score=78.53 Aligned_cols=59 Identities=12% Similarity=0.107 Sum_probs=40.9
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYT 420 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~ 420 (601)
..+..+|+.|....|++.++++|||||+||.||-.++.+.....+|..|+.++|+...-
T Consensus 132 ~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F 190 (331)
T PF00151_consen 132 RQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLF 190 (331)
T ss_dssp HHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTT
T ss_pred HHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccc
Confidence 55666677777666676679999999999999998888854113899999999886543
No 145
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.68 E-value=0.00014 Score=73.48 Aligned_cols=40 Identities=18% Similarity=0.367 Sum_probs=33.4
Q ss_pred CCcEEEEEEchhHHHHHHHHHhCC-CccccceeEEEccCCC
Q 007502 379 DGKLLAIGHSMGGILLYAMLSRCG-RESRLAAIVTLASSLD 418 (601)
Q Consensus 379 ~~kv~LVGHSmGG~IAl~~Aa~~P-~~~~V~~lVllap~~~ 418 (601)
..+++|+|||+||.+|+.+|.+.- ..+.|..++++++...
T Consensus 64 ~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 64 EGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred CCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 359999999999999999997743 3467999999998766
No 146
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.68 E-value=8e-05 Score=74.88 Aligned_cols=52 Identities=25% Similarity=0.385 Sum_probs=40.4
Q ss_pred HHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCC
Q 007502 366 AAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDY 419 (601)
Q Consensus 366 a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~ 419 (601)
+++.+|..++.....+..++|+||||..|+.++.+|| +.+.++++++|...+
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~P--d~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHP--DLFGAVIAFSGALDP 152 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHST--TTESEEEEESEESET
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCc--cccccccccCccccc
Confidence 3444455555544334899999999999999999977 999999999987654
No 147
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.65 E-value=0.0083 Score=62.13 Aligned_cols=77 Identities=16% Similarity=0.201 Sum_probs=47.6
Q ss_pred ceEEEEeeCCCeEEEEEEeCCCCCCCCCCCcEEEecCCCCCCccc-ccC-CCCcHHHHHHhCCCeEEEeCCCCCCCCCCC
Q 007502 81 ELHYVSVANCDWRLALWRYNPPPQAPTRNHPLLLLSGVGTNAIGY-DLS-PGSSFARYMAGQGFDTWILEVRGAGLSVRG 158 (601)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~-~~~-~~~~~a~~l~~~G~~v~~~d~rg~g~S~~~ 158 (601)
....++...|+..|--.... .+++. .+.-||++-|.+..-... -+. ....+-+..-..|-.|+.+++||.|.|.+.
T Consensus 111 ~~kRv~Iq~D~~~IDt~~I~-~~~a~-~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~ 188 (365)
T PF05677_consen 111 SVKRVPIQYDGVKIDTMAIH-QPEAK-PQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGP 188 (365)
T ss_pred ceeeEEEeeCCEEEEEEEee-CCCCC-CCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCC
Confidence 45567777799998666443 22332 345688887766543321 001 112344444456889999999999999876
Q ss_pred C
Q 007502 159 S 159 (601)
Q Consensus 159 ~ 159 (601)
.
T Consensus 189 ~ 189 (365)
T PF05677_consen 189 P 189 (365)
T ss_pred C
Confidence 4
No 148
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.59 E-value=0.00013 Score=57.28 Aligned_cols=46 Identities=26% Similarity=0.357 Sum_probs=30.6
Q ss_pred ceEEEEeeCCCeEEEEEEeCCCC---CCCCCCCcEEEecCCCCCCccccc
Q 007502 81 ELHYVSVANCDWRLALWRYNPPP---QAPTRNHPLLLLSGVGTNAIGYDL 127 (601)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~~p~~---~~~~~~~p~~llhG~~~~~~~~~~ 127 (601)
|.|+|.++ ||+-|.++|..++. ...+.++||+|.||+..++..|-+
T Consensus 13 E~h~V~T~-DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv~ 61 (63)
T PF04083_consen 13 EEHEVTTE-DGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWVL 61 (63)
T ss_dssp EEEEEE-T-TSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGCS
T ss_pred EEEEEEeC-CCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHHc
Confidence 78888888 99999999996664 133468899999999999988853
No 149
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.58 E-value=0.0013 Score=71.46 Aligned_cols=51 Identities=12% Similarity=0.221 Sum_probs=38.9
Q ss_pred hhHHHHHHHHHHHcCC--CCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCC
Q 007502 362 EDVPAAMEYIRAQSKP--KDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSL 417 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~--~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~ 417 (601)
+|+.-.|+. ++.. +.++.+|+|+||||..++.++.++| +.+.+++.+++..
T Consensus 271 ~eLlP~I~~---~y~~~~d~~~~~IaG~S~GGl~AL~~al~~P--d~Fg~v~s~Sgs~ 323 (411)
T PRK10439 271 QELLPQVRA---IAPFSDDADRTVVAGQSFGGLAALYAGLHWP--ERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHH---hCCCCCCccceEEEEEChHHHHHHHHHHhCc--ccccEEEEeccce
Confidence 554444443 3332 2357899999999999999999976 9999999999863
No 150
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.57 E-value=0.00027 Score=70.79 Aligned_cols=56 Identities=16% Similarity=0.301 Sum_probs=41.3
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCC-C------ccccceeEEEccCCCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCG-R------ESRLAAIVTLASSLDY 419 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P-~------~~~V~~lVllap~~~~ 419 (601)
.++..++..|....+. .+|+|++||||+.+.+....... . ..++..+|+.+|-++.
T Consensus 77 ~~l~~~L~~L~~~~~~--~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 77 PALARFLRDLARAPGI--KRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred HHHHHHHHHHHhccCC--ceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 6677777777766444 49999999999999998765532 1 1367889998887654
No 151
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.38 E-value=0.0035 Score=60.70 Aligned_cols=61 Identities=20% Similarity=0.268 Sum_probs=45.3
Q ss_pred chhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCC
Q 007502 356 FDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDY 419 (601)
Q Consensus 356 ~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~ 419 (601)
+++-+ +|+..+++++... +.. .+|+|+|||-|..-.+.|....-.+..|++.|+.+|..+.
T Consensus 86 lk~D~-edl~~l~~Hi~~~-~fS-t~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 86 LKDDV-EDLKCLLEHIQLC-GFS-TDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDR 146 (299)
T ss_pred ccccH-HHHHHHHHHhhcc-Ccc-cceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchh
Confidence 33444 9999999988665 222 3899999999999988888442235678888888887653
No 152
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.37 E-value=0.023 Score=56.14 Aligned_cols=54 Identities=24% Similarity=0.397 Sum_probs=37.5
Q ss_pred hHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCC
Q 007502 363 DVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSL 417 (601)
Q Consensus 363 Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~ 417 (601)
.+..-++++++... .+.|++++|||-|+.+.+.+.-.--..-.|.+.+++-|.+
T Consensus 94 QV~HKlaFik~~~P-k~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 94 QVDHKLAFIKEYVP-KDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred HHHHHHHHHHHhCC-CCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 33444555555432 3469999999999999999887311245688888888764
No 153
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.35 E-value=0.0013 Score=67.35 Aligned_cols=53 Identities=17% Similarity=0.157 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSL 417 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~ 417 (601)
..+.+++++.....|+..+.|+|.|||.||.-++.+|..|| .|+++|+-++.-
T Consensus 293 nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YP---dVkavvLDAtFD 345 (517)
T KOG1553|consen 293 NAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYP---DVKAVVLDATFD 345 (517)
T ss_pred HHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCC---CceEEEeecchh
Confidence 34455667766777888889999999999999999999976 699999877653
No 154
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.25 E-value=0.00075 Score=71.36 Aligned_cols=58 Identities=33% Similarity=0.394 Sum_probs=42.6
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTS 421 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~ 421 (601)
+-+...|+.+...++. +++.|+||||||.+...++..++...+|+.++.++++-.-..
T Consensus 111 ~ql~~~V~~~l~~~ga--~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt~ 168 (336)
T COG1075 111 EQLFAYVDEVLAKTGA--KKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGTE 168 (336)
T ss_pred HHHHHHHHHHHhhcCC--CceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCCch
Confidence 3344455555555554 399999999999999999888553478999999998754433
No 155
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.20 E-value=0.0024 Score=71.09 Aligned_cols=58 Identities=14% Similarity=0.173 Sum_probs=43.9
Q ss_pred hhhHHHHHHHHHHH---cCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCC
Q 007502 361 EEDVPAAMEYIRAQ---SKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLD 418 (601)
Q Consensus 361 ~~Dl~a~Id~L~~~---~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~ 418 (601)
..|+..+++++++. +|.+..+|.|+|+|.||..+..++.....+..++++|+.++...
T Consensus 154 ~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 154 LKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 37778888888764 46677899999999999999888766222356888988886543
No 156
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.13 E-value=0.0011 Score=65.69 Aligned_cols=21 Identities=38% Similarity=0.593 Sum_probs=17.5
Q ss_pred CcEEEEEEchhHHHHHHHHHh
Q 007502 380 GKLLAIGHSMGGILLYAMLSR 400 (601)
Q Consensus 380 ~kv~LVGHSmGG~IAl~~Aa~ 400 (601)
.++.+|||||||.++-.+...
T Consensus 78 ~~IsfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALGL 98 (217)
T ss_pred ccceEEEecccHHHHHHHHHH
Confidence 489999999999999766553
No 157
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.11 E-value=0.025 Score=56.26 Aligned_cols=62 Identities=19% Similarity=0.197 Sum_probs=46.6
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhhcCCC
Q 007502 530 ILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDSVS 601 (601)
Q Consensus 530 VLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~~~~s 601 (601)
+.++.+++|..+|...+..+.+..|+. ++..+ .+||..-+.. ..+.+-+.|.+-|++.++.|
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~--eVr~~------egGHVsayl~--k~dlfRR~I~d~L~R~~kes 370 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGC--EVRYL------EGGHVSAYLF--KQDLFRRAIVDGLDRLDKES 370 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCC--EEEEe------ecCceeeeeh--hchHHHHHHHHHHHhhhhcc
Confidence 578899999999999999999999998 55555 2455432222 34788899999998877653
No 158
>PRK04940 hypothetical protein; Provisional
Probab=97.08 E-value=0.016 Score=55.20 Aligned_cols=35 Identities=23% Similarity=0.292 Sum_probs=29.3
Q ss_pred CcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCC
Q 007502 380 GKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDY 419 (601)
Q Consensus 380 ~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~ 419 (601)
+++.|||.||||..|..++.++. + ..|+++|.+.+
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g----~-~aVLiNPAv~P 94 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG----I-RQVIFNPNLFP 94 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC----C-CEEEECCCCCh
Confidence 37899999999999999999954 5 46688998765
No 159
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.07 E-value=0.0018 Score=69.89 Aligned_cols=58 Identities=17% Similarity=0.352 Sum_probs=46.6
Q ss_pred hhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCC----ccccceeEEEccCCCC
Q 007502 358 HYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGR----ESRLAAIVTLASSLDY 419 (601)
Q Consensus 358 ~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~----~~~V~~lVllap~~~~ 419 (601)
++. ..+...|+.+....+ +|++||||||||.++..+....+. ...|+++|.++++..-
T Consensus 101 ~~~-~~lk~~ie~~~~~~~---~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 101 EYF-TKLKQLIEEAYKKNG---KKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HHH-HHHHHHHHHHHHhcC---CcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCC
Confidence 565 788888888877643 499999999999999999988651 2469999999987543
No 160
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.05 E-value=0.0088 Score=59.95 Aligned_cols=63 Identities=22% Similarity=0.303 Sum_probs=48.4
Q ss_pred CCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCC--ceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHH
Q 007502 525 KCNIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 594 (601)
Q Consensus 525 ~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~--~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL 594 (601)
...+|-|.|+++.|.+++.+.++++.+..... +++.+.+ ++.+|..|+- ..|+++++.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f--~~S~HV~H~r-----~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKF--EDSPHVAHLR-----KHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecC--CCCchhhhcc-----cCHHHHHHHHHhhC
Confidence 44589999999999999999998887665443 2344444 6677777764 57899999999885
No 161
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.03 E-value=0.0044 Score=63.61 Aligned_cols=35 Identities=17% Similarity=0.373 Sum_probs=31.6
Q ss_pred cEEEEEEchhHHHHHHHHHhCCCc-cccceeEEEccC
Q 007502 381 KLLAIGHSMGGILLYAMLSRCGRE-SRLAAIVTLASS 416 (601)
Q Consensus 381 kv~LVGHSmGG~IAl~~Aa~~P~~-~~V~~lVllap~ 416 (601)
-+++||||.||.++-.++.++| . ..|+.+|.++++
T Consensus 95 G~naIGfSQGGlflRa~ierc~-~~p~V~nlISlggp 130 (314)
T PLN02633 95 GYNIVGRSQGNLVARGLIEFCD-GGPPVYNYISLAGP 130 (314)
T ss_pred cEEEEEEccchHHHHHHHHHCC-CCCCcceEEEecCC
Confidence 4899999999999999999987 4 579999999975
No 162
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.02 E-value=0.0099 Score=60.24 Aligned_cols=74 Identities=27% Similarity=0.331 Sum_probs=52.3
Q ss_pred ccccCCCC-CCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhhc
Q 007502 520 KDHIHKCN-IPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 598 (601)
Q Consensus 520 ~~~L~~I~-vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~~ 598 (601)
...+.++. +|+|+++|++|.+||......+++......++...+ ....|.+........++.++.+.+|+.++.
T Consensus 224 ~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~-----~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 224 FDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFV-----PGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred hhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEe-----cCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 33455555 799999999999999999999999887633344444 344476543222223488999999998753
No 163
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.01 E-value=0.008 Score=66.34 Aligned_cols=62 Identities=19% Similarity=0.148 Sum_probs=42.7
Q ss_pred hhhhhhHHHHHHHHHHHcC-CCCCcEEEEEEchhHHHHHHHHHhCC--------CccccceeEEEccCCCCC
Q 007502 358 HYLEEDVPAAMEYIRAQSK-PKDGKLLAIGHSMGGILLYAMLSRCG--------RESRLAAIVTLASSLDYT 420 (601)
Q Consensus 358 ~~a~~Dl~a~Id~L~~~~g-~~~~kv~LVGHSmGG~IAl~~Aa~~P--------~~~~V~~lVllap~~~~~ 420 (601)
+.+ +|+.++++....++. ....+++|+|||+||..+..+|.+-- ..-.++++++-++.+++.
T Consensus 149 ~~a-~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~ 219 (462)
T PTZ00472 149 EVS-EDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDPY 219 (462)
T ss_pred HHH-HHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccChh
Confidence 444 777777776655432 22358999999999999988776621 023578888888776653
No 164
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=96.93 E-value=0.0095 Score=63.24 Aligned_cols=67 Identities=16% Similarity=0.155 Sum_probs=52.7
Q ss_pred cccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 007502 519 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 597 (601)
Q Consensus 519 ~~~~L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~ 597 (601)
......++++|.++|.|..|.+..++....++..+++ .+.+..+ ++.+|.. ....+.+.+..|+...
T Consensus 254 P~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G-~K~lr~v-----PN~~H~~------~~~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 254 PYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPG-EKYLRYV-----PNAGHSL------IGSDVVQSLRAFYNRI 320 (367)
T ss_pred HHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCC-CeeEEeC-----CCCCccc------chHHHHHHHHHHHHHH
Confidence 3344567799999999999999999999999999997 5566666 6777764 2267788888888763
No 165
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.91 E-value=0.032 Score=62.30 Aligned_cols=59 Identities=24% Similarity=0.337 Sum_probs=48.0
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCCc
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTSS 422 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~~ 422 (601)
.|+.++.++|.++--.....++++|-|.||+++-.++.+. |+.++++|+-.|.++....
T Consensus 509 ~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~--P~lf~~iiA~VPFVDvltT 567 (682)
T COG1770 509 TDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMA--PDLFAGIIAQVPFVDVLTT 567 (682)
T ss_pred HHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhC--hhhhhheeecCCccchhhh
Confidence 7777888888776222335899999999999999999995 5999999999998876543
No 166
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.86 E-value=0.0041 Score=64.71 Aligned_cols=61 Identities=18% Similarity=0.379 Sum_probs=46.5
Q ss_pred hhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCC------CccccceeEEEccCCCCC
Q 007502 358 HYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCG------RESRLAAIVTLASSLDYT 420 (601)
Q Consensus 358 ~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P------~~~~V~~lVllap~~~~~ 420 (601)
.|...++..+|.+|....+. ++|+|++||||..+++....+.. .+.+++-+|+-+|-++..
T Consensus 171 ~~Sr~aLe~~lr~La~~~~~--~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~D 237 (377)
T COG4782 171 NYSRPALERLLRYLATDKPV--KRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVD 237 (377)
T ss_pred hhhHHHHHHHHHHHHhCCCC--ceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChh
Confidence 44458899999999888654 48999999999999998765432 235678888888876653
No 167
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=96.78 E-value=0.0043 Score=67.98 Aligned_cols=56 Identities=13% Similarity=0.213 Sum_probs=43.2
Q ss_pred hhhHHHHHHHHHHHcCC-CCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCC
Q 007502 361 EEDVPAAMEYIRAQSKP-KDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLD 418 (601)
Q Consensus 361 ~~Dl~a~Id~L~~~~g~-~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~ 418 (601)
.+|++.++++++.+... +..|++++|-|.||+++..+-.+|| +.|.+.+.-++++.
T Consensus 93 LaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP--~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 93 LADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYP--HLFDGAWASSAPVQ 149 (434)
T ss_dssp HHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-T--TT-SEEEEET--CC
T ss_pred HHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCC--CeeEEEEeccceee
Confidence 49999999999977532 3458999999999999999999987 88999998887654
No 168
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=96.77 E-value=0.016 Score=62.79 Aligned_cols=58 Identities=14% Similarity=0.196 Sum_probs=46.6
Q ss_pred hhhHHHHHHHHHHH---cCCCCCcEEEEEEchhHHHHHHHHHhCC-CccccceeEEEccCCCC
Q 007502 361 EEDVPAAMEYIRAQ---SKPKDGKLLAIGHSMGGILLYAMLSRCG-RESRLAAIVTLASSLDY 419 (601)
Q Consensus 361 ~~Dl~a~Id~L~~~---~g~~~~kv~LVGHSmGG~IAl~~Aa~~P-~~~~V~~lVllap~~~~ 419 (601)
..|...+++++++. +|-++.+|.|+|+|-|++.++.+++. | ....++++|+.++....
T Consensus 158 l~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~~ 219 (491)
T COG2272 158 LLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAASR 219 (491)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCCc
Confidence 48888888888774 57777899999999999999887765 4 45678889999987753
No 169
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.75 E-value=0.0061 Score=66.75 Aligned_cols=68 Identities=22% Similarity=0.365 Sum_probs=46.7
Q ss_pred cCCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccc------cchhhHHHHHHHHHhh
Q 007502 523 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGR------MAVEQVYPCIVQFLGR 596 (601)
Q Consensus 523 L~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~------~~pe~v~~~I~eFL~~ 596 (601)
+-.++.|+|+|.|.+|..++++..+.+.+.+.. ..+++++ +..+|..-+-+. ....+|...|.+||.+
T Consensus 300 Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA-~~elhVI-----~~adhsmaipk~k~esegltqseVd~~i~~aI~e 373 (784)
T KOG3253|consen 300 LLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQA-EVELHVI-----GGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKE 373 (784)
T ss_pred hHhcCCceEEEecCCcccCCHHHHHHHHHHhhc-cceEEEe-----cCCCccccCCccccccccccHHHHHHHHHHHHHH
Confidence 445679999999999999999999999998764 4577777 444444222220 1235666666666654
No 170
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.68 E-value=0.011 Score=57.04 Aligned_cols=52 Identities=17% Similarity=0.182 Sum_probs=38.7
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASS 416 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~ 416 (601)
+-+..++++.... |++..++.+-|.||||.+++..+..+| ..+.+++...+.
T Consensus 76 ~~i~~Li~~e~~~-Gi~~~rI~igGfs~G~a~aL~~~~~~~--~~l~G~~~~s~~ 127 (206)
T KOG2112|consen 76 DNIANLIDNEPAN-GIPSNRIGIGGFSQGGALALYSALTYP--KALGGIFALSGF 127 (206)
T ss_pred HHHHHHHHHHHHc-CCCccceeEcccCchHHHHHHHHhccc--cccceeeccccc
Confidence 5555555554443 666678999999999999999999865 777777766654
No 171
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=96.68 E-value=0.04 Score=54.10 Aligned_cols=35 Identities=11% Similarity=0.111 Sum_probs=27.3
Q ss_pred cEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCC
Q 007502 381 KLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDY 419 (601)
Q Consensus 381 kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~ 419 (601)
.+.|||+|||=.+|..+... .+++..|++++...+
T Consensus 58 ~i~lvAWSmGVw~A~~~l~~----~~~~~aiAINGT~~P 92 (213)
T PF04301_consen 58 EIYLVAWSMGVWAANRVLQG----IPFKRAIAINGTPYP 92 (213)
T ss_pred eEEEEEEeHHHHHHHHHhcc----CCcceeEEEECCCCC
Confidence 89999999999999887655 346777788765443
No 172
>PLN02606 palmitoyl-protein thioesterase
Probab=96.57 E-value=0.01 Score=60.88 Aligned_cols=35 Identities=14% Similarity=0.327 Sum_probs=31.7
Q ss_pred cEEEEEEchhHHHHHHHHHhCCCc-cccceeEEEccC
Q 007502 381 KLLAIGHSMGGILLYAMLSRCGRE-SRLAAIVTLASS 416 (601)
Q Consensus 381 kv~LVGHSmGG~IAl~~Aa~~P~~-~~V~~lVllap~ 416 (601)
-+++||+|.||.++-.++.++| . ..|+.+|.++++
T Consensus 96 G~naIGfSQGglflRa~ierc~-~~p~V~nlISlggp 131 (306)
T PLN02606 96 GYNIVAESQGNLVARGLIEFCD-NAPPVINYVSLGGP 131 (306)
T ss_pred ceEEEEEcchhHHHHHHHHHCC-CCCCcceEEEecCC
Confidence 4899999999999999999987 4 579999999976
No 173
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=96.54 E-value=0.026 Score=62.23 Aligned_cols=56 Identities=29% Similarity=0.223 Sum_probs=45.6
Q ss_pred hhhHHHHHHHHHHHcCC-CCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCC
Q 007502 361 EEDVPAAMEYIRAQSKP-KDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDY 419 (601)
Q Consensus 361 ~~Dl~a~Id~L~~~~g~-~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~ 419 (601)
.+|+.++.+.|..+ |+ .++++.+.|-|-||.+.-....+.| +.+.++|+--|.+++
T Consensus 481 fdDf~AVaedLi~r-gitspe~lgi~GgSNGGLLvg~alTQrP--elfgA~v~evPllDM 537 (648)
T COG1505 481 FDDFIAVAEDLIKR-GITSPEKLGIQGGSNGGLLVGAALTQRP--ELFGAAVCEVPLLDM 537 (648)
T ss_pred hHHHHHHHHHHHHh-CCCCHHHhhhccCCCCceEEEeeeccCh--hhhCceeeccchhhh
Confidence 38888999999887 44 3468999999999999999999955 889888887776554
No 174
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.54 E-value=0.0097 Score=59.82 Aligned_cols=56 Identities=21% Similarity=0.344 Sum_probs=41.4
Q ss_pred hhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCC
Q 007502 358 HYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLD 418 (601)
Q Consensus 358 ~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~ 418 (601)
+++.+++.-+|+. ++..+.++-.++|||+||.+++.....+| +.+...++++|...
T Consensus 118 ~fL~~~lkP~Ie~---~y~~~~~~~~i~GhSlGGLfvl~aLL~~p--~~F~~y~~~SPSlW 173 (264)
T COG2819 118 EFLTEQLKPFIEA---RYRTNSERTAIIGHSLGGLFVLFALLTYP--DCFGRYGLISPSLW 173 (264)
T ss_pred HHHHHhhHHHHhc---ccccCcccceeeeecchhHHHHHHHhcCc--chhceeeeecchhh
Confidence 4444555555554 22333457899999999999999999965 99999999998753
No 175
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=96.51 E-value=0.01 Score=56.82 Aligned_cols=37 Identities=35% Similarity=0.475 Sum_probs=29.4
Q ss_pred CcEEEEEEchhHHHHHHHHHhCC-CccccceeEEEccC
Q 007502 380 GKLLAIGHSMGGILLYAMLSRCG-RESRLAAIVTLASS 416 (601)
Q Consensus 380 ~kv~LVGHSmGG~IAl~~Aa~~P-~~~~V~~lVllap~ 416 (601)
.+++++||||||.++..++.+.. ....+.+++++++.
T Consensus 64 ~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 64 RPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTY 101 (212)
T ss_pred CCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccC
Confidence 48999999999999998887632 23568889888764
No 176
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.40 E-value=0.011 Score=66.07 Aligned_cols=57 Identities=14% Similarity=0.165 Sum_probs=44.4
Q ss_pred hhhhhHHHHHHHHHHH---cCCCCCcEEEEEEchhHHHHHHHHHhCC-CccccceeEEEccC
Q 007502 359 YLEEDVPAAMEYIRAQ---SKPKDGKLLAIGHSMGGILLYAMLSRCG-RESRLAAIVTLASS 416 (601)
Q Consensus 359 ~a~~Dl~a~Id~L~~~---~g~~~~kv~LVGHSmGG~IAl~~Aa~~P-~~~~V~~lVllap~ 416 (601)
+...|...+++++++. +|-++.+|.|+|||-||..+...+.. | ....++++|+.++.
T Consensus 184 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s-p~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 184 YGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLS-PSSKGLFHRAILQSGS 244 (535)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHG-GGGTTSBSEEEEES--
T ss_pred hhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeec-cccccccccccccccc
Confidence 3458888999999885 45566799999999999988877766 3 34679999999974
No 177
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.37 E-value=0.0063 Score=67.40 Aligned_cols=58 Identities=17% Similarity=0.347 Sum_probs=43.6
Q ss_pred hhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhC-----------C--CccccceeEEEccCC
Q 007502 357 DHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC-----------G--RESRLAAIVTLASSL 417 (601)
Q Consensus 357 ~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~-----------P--~~~~V~~lVllap~~ 417 (601)
++|. ..+...|+.+....+- +|++|+||||||.+++.+...- + .+..|+++|.++++.
T Consensus 193 d~YF-~rLK~lIE~ay~~ngg--kKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 193 DQTL-SRLKSNIELMVATNGG--KKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred hHHH-HHHHHHHHHHHHHcCC--CeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 4565 7788888888766432 4999999999999999987641 1 234588999999764
No 178
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.26 E-value=0.06 Score=53.92 Aligned_cols=35 Identities=20% Similarity=0.454 Sum_probs=31.5
Q ss_pred cEEEEEEchhHHHHHHHHHhCCCccccceeEEEccC
Q 007502 381 KLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASS 416 (601)
Q Consensus 381 kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~ 416 (601)
-++++|.|.||.++-.++..++ ...|+.+|.++++
T Consensus 93 Gynivg~SQGglv~Raliq~cd-~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 93 GYNIVGYSQGGLVARALIQFCD-NPPVKNFISLGGP 127 (296)
T ss_pred ceEEEEEccccHHHHHHHHhCC-CCCcceeEeccCC
Confidence 5899999999999999999987 5789999999865
No 179
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=96.22 E-value=0.032 Score=56.82 Aligned_cols=35 Identities=31% Similarity=0.654 Sum_probs=28.5
Q ss_pred cEEEEEEchhHHHHHHHHHhCCCccccceeEEEccC
Q 007502 381 KLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASS 416 (601)
Q Consensus 381 kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~ 416 (601)
-+++||+|.||.++-.++.++| ...|+.+|.++++
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~-~~~V~nlISlggp 115 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCN-DPPVHNLISLGGP 115 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-T-SS-EEEEEEES--
T ss_pred ceeeeeeccccHHHHHHHHHCC-CCCceeEEEecCc
Confidence 5899999999999999999987 6689999999975
No 180
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.07 E-value=0.009 Score=64.22 Aligned_cols=59 Identities=22% Similarity=0.392 Sum_probs=45.2
Q ss_pred hhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCC------ccccceeEEEccCCC
Q 007502 357 DHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGR------ESRLAAIVTLASSLD 418 (601)
Q Consensus 357 ~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~------~~~V~~lVllap~~~ 418 (601)
++|. ..++..|+...+..|- +|++||+|||||.+.+.+...++. +..|+++|.+++++.
T Consensus 162 d~yl-~kLK~~iE~~~~~~G~--kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~l 226 (473)
T KOG2369|consen 162 DQYL-SKLKKKIETMYKLNGG--KKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPWL 226 (473)
T ss_pred HHHH-HHHHHHHHHHHHHcCC--CceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCchhc
Confidence 4565 7788888887777664 499999999999999999988761 235778888776543
No 181
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.96 E-value=0.015 Score=53.94 Aligned_cols=54 Identities=26% Similarity=0.194 Sum_probs=38.7
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCC--ccccceeEEEccCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGR--ESRLAAIVTLASSL 417 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~--~~~V~~lVllap~~ 417 (601)
..+...++....++ +..+++++||||||.+|..++..... ...+..++.++++.
T Consensus 12 ~~i~~~~~~~~~~~--p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 12 NLVLPLLKSALAQY--PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHC--CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 66666666665543 33589999999999999999888541 12566777877764
No 182
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.94 E-value=0.026 Score=48.92 Aligned_cols=61 Identities=21% Similarity=0.258 Sum_probs=46.6
Q ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 007502 526 CNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 596 (601)
Q Consensus 526 I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~ 596 (601)
-..|+|+|.++.|+++|.+.++.+.+.++++ +++.+ ...+|.-+. . ...-+.+.|.+||..
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s--~lvt~-----~g~gHg~~~-~--~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLPGS--RLVTV-----DGAGHGVYA-G--GSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCCCc--eEEEE-----eccCcceec-C--CChHHHHHHHHHHHc
Confidence 3589999999999999999999999999986 77776 333554322 1 225567788888874
No 183
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.88 E-value=0.018 Score=65.07 Aligned_cols=56 Identities=32% Similarity=0.458 Sum_probs=37.6
Q ss_pred hhHHHHHHHHHHHcCC----C---CCcEEEEEEchhHHHHHHHHHhCC-CccccceeEEEccCC
Q 007502 362 EDVPAAMEYIRAQSKP----K---DGKLLAIGHSMGGILLYAMLSRCG-RESRLAAIVTLASSL 417 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~----~---~~kv~LVGHSmGG~IAl~~Aa~~P-~~~~V~~lVllap~~ 417 (601)
+-+..+|.++...+.- + +..|+||||||||++|...+...- .+..|.-++.++++-
T Consensus 157 EYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 157 EYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred HHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 5556666666554322 1 234999999999999988776521 345677788887653
No 184
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=95.62 E-value=0.06 Score=57.13 Aligned_cols=57 Identities=16% Similarity=0.304 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCC---CccccceeEEEccCCCCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCG---RESRLAAIVTLASSLDYT 420 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P---~~~~V~~lVllap~~~~~ 420 (601)
.++.+..++|.+..|.. +|+|+|-|.||.+++.++.... ....-+++|+++|.+.+.
T Consensus 179 ~qlv~~Y~~Lv~~~G~~--nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 179 RQLVATYDYLVESEGNK--NIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHHHHHHHHHhccCCC--eEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 66777777887555654 8999999999999998876532 112357899999988765
No 185
>COG0627 Predicted esterase [General function prediction only]
Probab=95.53 E-value=0.033 Score=58.17 Aligned_cols=65 Identities=20% Similarity=0.332 Sum_probs=48.8
Q ss_pred CCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCCC
Q 007502 354 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYTS 421 (601)
Q Consensus 354 ~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~~ 421 (601)
|.|.+|++.++.+.++.-....+- ..+..++||||||.=|+.+|+++| ++++.+..+++.+.+..
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~-~~~~aI~G~SMGG~GAl~lA~~~p--d~f~~~sS~Sg~~~~s~ 191 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGT-GDGRAIAGHSMGGYGALKLALKHP--DRFKSASSFSGILSPSS 191 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccc-cCCceeEEEeccchhhhhhhhhCc--chhceeccccccccccc
Confidence 567788878888666544221100 016799999999999999999976 99999999998877654
No 186
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.46 E-value=0.025 Score=56.17 Aligned_cols=38 Identities=26% Similarity=0.488 Sum_probs=31.3
Q ss_pred CcEEEEEEchhHHHHHHHHHhCC--CccccceeEEEccCC
Q 007502 380 GKLLAIGHSMGGILLYAMLSRCG--RESRLAAIVTLASSL 417 (601)
Q Consensus 380 ~kv~LVGHSmGG~IAl~~Aa~~P--~~~~V~~lVllap~~ 417 (601)
.++.+.|||.||++|..++...+ ..++|.+++..+++.
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 37999999999999999988854 246788998888764
No 187
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=95.41 E-value=0.05 Score=57.98 Aligned_cols=58 Identities=16% Similarity=0.055 Sum_probs=43.7
Q ss_pred hhhhhhHHHHHHHHHHHcCCCC--CcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCC
Q 007502 358 HYLEEDVPAAMEYIRAQSKPKD--GKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSL 417 (601)
Q Consensus 358 ~~a~~Dl~a~Id~L~~~~g~~~--~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~ 417 (601)
-+..-|+..++.+++...+-.. -|++++|+|.||.+|...|--.| -.+++++=-++.+
T Consensus 160 IMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP--~~~~~~iDns~~~ 219 (403)
T PF11144_consen 160 IMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAP--WLFDGVIDNSSYA 219 (403)
T ss_pred HHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCc--cceeEEEecCccc
Confidence 3444788888888888754332 38999999999999998888854 7888877666554
No 188
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=95.23 E-value=0.48 Score=48.06 Aligned_cols=229 Identities=17% Similarity=0.288 Sum_probs=115.6
Q ss_pred CCCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhC---CCccccceeEEEccCCCCCCchhHHHhh
Q 007502 353 DWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC---GRESRLAAIVTLASSLDYTSSKSTLKLL 429 (601)
Q Consensus 353 d~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~---P~~~~V~~lVllap~~~~~~~~~~l~~l 429 (601)
.|++++|+ +-+.++++++ |. .+++++-|.-+.-.+...+.- ..+..-...++++++++-...+.....+
T Consensus 150 ~FdldDYI-dyvie~~~~~----Gp---~~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR~nPTavN~l 221 (415)
T COG4553 150 HFDLDDYI-DYVIEMINFL----GP---DAHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDARKNPTAVNEL 221 (415)
T ss_pred CccHHHHH-HHHHHHHHHh----CC---CCcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCccccccCcHHHhHh
Confidence 37788997 8889999888 32 588999998764443332221 1235677899999988766555443322
Q ss_pred cccc--------------ChhhhcCCCccchHHHHHHhcCCCCC--chhHHHHHhhhccccccCCHHHHHHHHHhhc--C
Q 007502 430 LPLA--------------DPAQALNVPVVPLGALLTAAYPLSSS--PPYVFSWLNNLISAEDMMHPELLKKLVLNNF--C 491 (601)
Q Consensus 430 ~~l~--------------~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~ 491 (601)
..-. .++...|....+--..+..+..+... ...-.+++..+..... -..+...++..+.. .
T Consensus 222 A~~k~~~WF~~n~vm~vP~~ypg~gR~VYPGFlQlagFmsmNldrH~~aH~~~~~~Lv~~D~-~~Ae~h~~FYdEYlavm 300 (415)
T COG4553 222 ATEKSIEWFRDNVVMQVPPPYPGFGRRVYPGFLQLAGFMSMNLDRHIDAHKDFFLSLVKNDG-DSAEKHREFYDEYLAVM 300 (415)
T ss_pred hhccchHHHHhCeeeecCCCCCCccccccccHHHhhhHhhcChhhhHHHHHHHHHHHHcccc-hhHHHHHHHHHHHHHHc
Confidence 1110 11111111111111111111111000 0001111222222111 11222222322221 2
Q ss_pred CCcHHHHHHHHHHHH------cCCcccCCCccccccccCCCC-CCEEEEEeCCCCCCCHHHH---HHHHHHCCCCceEEE
Q 007502 492 TIPAKLILQLTTAFR------EGGLRDRGGKFFYKDHIHKCN-IPILAIAGDQDLICPPEAV---EETVKLLPEDLVTYK 561 (601)
Q Consensus 492 ~~~~~~l~~~~~~~~------~~~~~~~~~~~d~~~~L~~I~-vPVLII~Ge~D~iVp~e~~---~~l~~~lp~~~~~l~ 561 (601)
..+.+.+.+-++... .+.+....... +...|+ +-.+-|-||+|.+.-.... ..+...+|...+...
T Consensus 301 dl~aEfYLqTid~VFqq~~LpkG~~vhrg~~v----dp~~I~~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy 376 (415)
T COG4553 301 DLTAEFYLQTIDEVFQQHALPKGEMVHRGKPV----DPTAITNVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHY 376 (415)
T ss_pred cchHHHHHHHHHHHHHHhcccCCceeecCCcC----ChhheeceeEEEeecccccccccchhHHHHHHHhcChHHHHHHh
Confidence 445555555444322 12222111111 223343 6778899999999765544 455555565433333
Q ss_pred EecCCCCCCCCcccccccccchhhHHHHHHHHHhhhcC
Q 007502 562 VFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 599 (601)
Q Consensus 562 vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~~~ 599 (601)
. .+..||++.+.|..=++++.+.|.+|+.++++
T Consensus 377 ~-----qp~vGHYGVFnGsrfr~eIvPri~dFI~~~d~ 409 (415)
T COG4553 377 M-----QPDVGHYGVFNGSRFREEIVPRIRDFIRRYDR 409 (415)
T ss_pred c-----CCCCCccceeccchHHHHHHHHHHHHHHHhCc
Confidence 3 36777777677777789999999999998875
No 189
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=94.90 E-value=0.07 Score=56.47 Aligned_cols=58 Identities=14% Similarity=0.261 Sum_probs=46.4
Q ss_pred hhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEc-cCCCCC
Q 007502 361 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLA-SSLDYT 420 (601)
Q Consensus 361 ~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVlla-p~~~~~ 420 (601)
..|.+++|.+++...+....+|+.+|-|.||+++..+=.+|| .-|.+.+.-+ |.+.+.
T Consensus 148 LADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYP--Hiv~GAlAaSAPvl~f~ 206 (492)
T KOG2183|consen 148 LADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYP--HIVLGALAASAPVLYFE 206 (492)
T ss_pred HHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcCh--hhhhhhhhccCceEeec
Confidence 489999999999998777779999999999999999999987 6666554444 433333
No 190
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=94.80 E-value=0.26 Score=53.56 Aligned_cols=56 Identities=16% Similarity=0.135 Sum_probs=48.3
Q ss_pred hhhHHHHHHHHHHHcCCCCC-cEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCC
Q 007502 361 EEDVPAAMEYIRAQSKPKDG-KLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLD 418 (601)
Q Consensus 361 ~~Dl~a~Id~L~~~~g~~~~-kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~ 418 (601)
.+|++++|+.+..+++..+. |.+..|-|.-|.++..+=..|| +.+.+.|..++++.
T Consensus 152 LaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yP--el~~GsvASSapv~ 208 (514)
T KOG2182|consen 152 LADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYP--ELTVGSVASSAPVL 208 (514)
T ss_pred HHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCc--hhheeeccccccee
Confidence 49999999999999877654 8999999999999999999987 88888888776543
No 191
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=94.77 E-value=0.13 Score=51.26 Aligned_cols=51 Identities=14% Similarity=0.142 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHHcCCCC--CcEEEEEEchhHHHHHHHHHhCCCccccceeEEEcc
Q 007502 363 DVPAAMEYIRAQSKPKD--GKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLAS 415 (601)
Q Consensus 363 Dl~a~Id~L~~~~g~~~--~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap 415 (601)
.....++.+..+.+... -+++-+|||||+-+-+.+...++ ..-++-|+++-
T Consensus 71 ~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~--~~r~gniliSF 123 (250)
T PF07082_consen 71 RFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFD--VERAGNILISF 123 (250)
T ss_pred HHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhcc--CcccceEEEec
Confidence 33445555555543322 37889999999999998888754 34466666663
No 192
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=94.58 E-value=0.066 Score=48.45 Aligned_cols=38 Identities=21% Similarity=0.341 Sum_probs=29.1
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 401 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~ 401 (601)
+.+...++.+..+.+ +.++++.|||+||.+|..++...
T Consensus 48 ~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 48 DQILDALKELVEKYP--DYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHhh
Confidence 566666666666644 24899999999999999888774
No 193
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=93.81 E-value=0.12 Score=50.56 Aligned_cols=43 Identities=28% Similarity=0.384 Sum_probs=35.6
Q ss_pred hhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhC
Q 007502 358 HYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 401 (601)
Q Consensus 358 ~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~ 401 (601)
+.+..||.++.++..++.+. +++++|+|||+|+.+...++.++
T Consensus 74 ~~ay~DV~~AF~~yL~~~n~-GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 74 DLAYSDVRAAFDYYLANYNN-GRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HhhHHHHHHHHHHHHHhcCC-CCCEEEEEeChHHHHHHHHHHHH
Confidence 44558999999988887654 36999999999999999998764
No 194
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=93.78 E-value=0.1 Score=51.75 Aligned_cols=37 Identities=27% Similarity=0.362 Sum_probs=28.2
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHh
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 400 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~ 400 (601)
.++...+..++.+. ++.++++.||||||.+|..++..
T Consensus 112 ~~~~~~~~~~~~~~--p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 112 NQVLPELKSALKQY--PDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred HHHHHHHHHHHhhC--CCceEEEEccCHHHHHHHHHHHH
Confidence 56666666665553 34589999999999999988876
No 195
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=93.52 E-value=0.092 Score=55.50 Aligned_cols=42 Identities=21% Similarity=0.288 Sum_probs=35.7
Q ss_pred hhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCC
Q 007502 358 HYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCG 402 (601)
Q Consensus 358 ~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P 402 (601)
+.+ +|+..+|++...+++.. ++.|+|+|+|+=+.-....+.|
T Consensus 307 ~~a-~Dl~r~i~~y~~~w~~~--~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 307 QIA-ADLSRLIRFYARRWGAK--RVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred HHH-HHHHHHHHHHHHhhCcc--eEEEEeecccchhhHHHHHhCC
Confidence 555 99999999999998865 9999999999988877776655
No 196
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.93 E-value=0.57 Score=45.47 Aligned_cols=40 Identities=23% Similarity=0.380 Sum_probs=33.5
Q ss_pred CcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCC
Q 007502 380 GKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDY 419 (601)
Q Consensus 380 ~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~ 419 (601)
..++++.||.||...+.+..++|..++|.++.+-+++...
T Consensus 190 ~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~ 229 (297)
T KOG3967|consen 190 ESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGS 229 (297)
T ss_pred ceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccC
Confidence 4899999999999999999999866788888777766443
No 197
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=92.81 E-value=0.12 Score=57.58 Aligned_cols=57 Identities=25% Similarity=0.353 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYT 420 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~ 420 (601)
+|+.+.+++|...--..+.+..+.|.|-||.++..+..++| +.+.++|+-.|.++..
T Consensus 531 ~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rP--dLF~avia~VpfmDvL 587 (712)
T KOG2237|consen 531 DDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRP--DLFGAVIAKVPFMDVL 587 (712)
T ss_pred HHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCc--hHhhhhhhcCcceehh
Confidence 78888888887762223468999999999999999999965 9999999888877653
No 198
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=92.57 E-value=0.27 Score=46.91 Aligned_cols=53 Identities=21% Similarity=0.285 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSL 417 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~ 417 (601)
.++..+++.|+... .++.++.++|||+|+.++-..+... ...+..+|+++++.
T Consensus 92 ~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~--~~~vddvv~~GSPG 144 (177)
T PF06259_consen 92 PRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQG--GLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhC--CCCcccEEEECCCC
Confidence 78888888887775 2345899999999999999887773 47899999999764
No 199
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=92.23 E-value=0.29 Score=49.06 Aligned_cols=60 Identities=15% Similarity=0.149 Sum_probs=44.9
Q ss_pred EeeCCCeEEEEEEeCCCCCCCCCCCcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCCCCC
Q 007502 86 SVANCDWRLALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGA 152 (601)
Q Consensus 86 ~~~~~~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~rg~ 152 (601)
+++..|-++..+...|....+ .|.||++|++.+-.... ..+|+.|+++||.|+++|+=+.
T Consensus 6 ~~~~~~~~~~~~~a~P~~~~~--~P~VIv~hei~Gl~~~i-----~~~a~rlA~~Gy~v~~Pdl~~~ 65 (236)
T COG0412 6 TIPAPDGELPAYLARPAGAGG--FPGVIVLHEIFGLNPHI-----RDVARRLAKAGYVVLAPDLYGR 65 (236)
T ss_pred EeeCCCceEeEEEecCCcCCC--CCEEEEEecccCCchHH-----HHHHHHHHhCCcEEEechhhcc
Confidence 334445778888888875444 37799999977654433 3799999999999999999764
No 200
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=92.02 E-value=0.32 Score=46.55 Aligned_cols=55 Identities=22% Similarity=0.278 Sum_probs=40.9
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHh--CC--CccccceeEEEccCCC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR--CG--RESRLAAIVTLASSLD 418 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~--~P--~~~~V~~lVllap~~~ 418 (601)
.++...|+....+. +..+++|+|+|+|+.++..++.. .+ ..++|.++|+++-+..
T Consensus 65 ~~~~~~i~~~~~~C--P~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 65 ANLVRLIEEYAARC--PNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHHhC--CCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 66677776666663 34599999999999999999877 22 3477889999886643
No 201
>PLN02454 triacylglycerol lipase
Probab=91.62 E-value=0.28 Score=52.75 Aligned_cols=39 Identities=18% Similarity=0.208 Sum_probs=30.1
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHh
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 400 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~ 400 (601)
+++...|+.+.+++.-...+|++.||||||.+|+.+|..
T Consensus 210 ~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 210 SQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 777788888877754221249999999999999998855
No 202
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=91.03 E-value=0.24 Score=47.63 Aligned_cols=100 Identities=24% Similarity=0.400 Sum_probs=64.0
Q ss_pred CCCcHHHHHHHHHHHHc-CCcccCCCccccc---cccCCCC-CCEEEEEeCCCCCCCHHHHHHHHHH---CCCCceEEEE
Q 007502 491 CTIPAKLILQLTTAFRE-GGLRDRGGKFFYK---DHIHKCN-IPILAIAGDQDLICPPEAVEETVKL---LPEDLVTYKV 562 (601)
Q Consensus 491 ~~~~~~~l~~~~~~~~~-~~~~~~~~~~d~~---~~L~~I~-vPVLII~Ge~D~iVp~e~~~~l~~~---lp~~~~~l~v 562 (601)
...+.+.+++.++.... ..+. .+.+.+. -+.+.|+ ++.|-|-|+.|.|+.+.......+. +|...+..++
T Consensus 95 mDl~AefyL~Ti~~VFq~~~L~--~G~~~~~Gr~Vdp~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~ 172 (202)
T PF06850_consen 95 MDLPAEFYLDTIRRVFQEHLLP--RGTWTVRGRPVDPAAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHL 172 (202)
T ss_pred ccCcHHHHHHHHHHHHHhCccc--CCceEECCEEcchHHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcc
Confidence 45666666666654332 1111 1111111 1445665 6777799999999988766555544 4544444555
Q ss_pred ecCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 007502 563 FGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 597 (601)
Q Consensus 563 i~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~ 597 (601)
. +..+|++.+.|..=.+++++.|.+|+.++
T Consensus 173 ~-----~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 173 Q-----PGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred c-----CCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 4 67788887778777799999999999864
No 203
>PLN02162 triacylglycerol lipase
Probab=90.81 E-value=0.53 Score=51.23 Aligned_cols=53 Identities=25% Similarity=0.323 Sum_probs=32.8
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHh---CCC---ccccceeEEEccC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR---CGR---ESRLAAIVTLASS 416 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~---~P~---~~~V~~lVllap~ 416 (601)
..+...++.+..+. ++.++++.|||+||++|..+++. +.. ..++.+++..+++
T Consensus 262 ~~I~~~L~~lL~k~--p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqP 320 (475)
T PLN02162 262 YTIRQMLRDKLARN--KNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQP 320 (475)
T ss_pred HHHHHHHHHHHHhC--CCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCC
Confidence 44555555544443 23589999999999999987652 110 1234556666654
No 204
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=90.70 E-value=0.96 Score=47.80 Aligned_cols=42 Identities=17% Similarity=0.316 Sum_probs=32.0
Q ss_pred CCCcEEEEEEchhHHHHHHHHHhCC---CccccceeEEEccCCCC
Q 007502 378 KDGKLLAIGHSMGGILLYAMLSRCG---RESRLAAIVTLASSLDY 419 (601)
Q Consensus 378 ~~~kv~LVGHSmGG~IAl~~Aa~~P---~~~~V~~lVllap~~~~ 419 (601)
..+|+.|||||+|+.+.+.++.... ....|+.+++++.++..
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 3458999999999999998776643 12348899999987654
No 205
>PLN02571 triacylglycerol lipase
Probab=90.49 E-value=0.4 Score=51.63 Aligned_cols=39 Identities=18% Similarity=0.210 Sum_probs=26.5
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHh
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 400 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~ 400 (601)
+++...|+.+..++.-...++++.||||||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 445555555544432212369999999999999998865
No 206
>PLN00413 triacylglycerol lipase
Probab=90.29 E-value=0.62 Score=50.82 Aligned_cols=53 Identities=23% Similarity=0.300 Sum_probs=34.5
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhC----C--CccccceeEEEccC
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC----G--RESRLAAIVTLASS 416 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~----P--~~~~V~~lVllap~ 416 (601)
+.+...++.+..++ +..++++.|||+||++|..++... + ...++.++...+++
T Consensus 268 y~i~~~Lk~ll~~~--p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~P 326 (479)
T PLN00413 268 YTILRHLKEIFDQN--PTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQP 326 (479)
T ss_pred HHHHHHHHHHHHHC--CCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCC
Confidence 45556666665553 335899999999999999887531 1 11245566666654
No 207
>PLN02408 phospholipase A1
Probab=90.27 E-value=0.4 Score=50.85 Aligned_cols=39 Identities=21% Similarity=0.154 Sum_probs=28.3
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHh
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 400 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~ 400 (601)
+.+.+.|+.+..+++-...+|++.|||+||.+|..+|..
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 555666666666544322369999999999999988866
No 208
>COG3150 Predicted esterase [General function prediction only]
Probab=90.18 E-value=1.1 Score=42.03 Aligned_cols=34 Identities=24% Similarity=0.414 Sum_probs=27.6
Q ss_pred cEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCC
Q 007502 381 KLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDY 419 (601)
Q Consensus 381 kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~ 419 (601)
.+.|+|-|+||..|.+++.++. ++++ +++|.+.+
T Consensus 60 ~p~ivGssLGGY~At~l~~~~G----irav-~~NPav~P 93 (191)
T COG3150 60 SPLIVGSSLGGYYATWLGFLCG----IRAV-VFNPAVRP 93 (191)
T ss_pred CceEEeecchHHHHHHHHHHhC----Chhh-hcCCCcCc
Confidence 6899999999999999999954 6655 56776654
No 209
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.85 E-value=5 Score=42.46 Aligned_cols=68 Identities=22% Similarity=0.200 Sum_probs=49.6
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhhcC
Q 007502 527 NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 599 (601)
Q Consensus 527 ~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~~~ 599 (601)
..+.+.+.+..|.++|.+..+++.+........+..+......|..|.- ..|..+.....+|+++...
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r-----~~p~~y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFR-----SFPKTYLKKCSEFLRSVIS 292 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeec-----cCcHHHHHHHHHHHHhccc
Confidence 4688899999999999999999866554433344444335666666654 3678999999999987653
No 210
>PLN02324 triacylglycerol lipase
Probab=88.61 E-value=0.67 Score=49.91 Aligned_cols=39 Identities=18% Similarity=0.278 Sum_probs=28.0
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHh
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 400 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~ 400 (601)
+.+.+.|..+...+.-.+.+|++.|||+||.+|...|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 555666666666543222369999999999999988864
No 211
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=88.52 E-value=0.4 Score=47.01 Aligned_cols=51 Identities=10% Similarity=0.138 Sum_probs=32.5
Q ss_pred EEEeCCCCCCCCCCCcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCCCCCC
Q 007502 96 LWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAG 153 (601)
Q Consensus 96 ~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~rg~g 153 (601)
.|.+.|... .+.+.||++|++.+-.... ..+|+.|+++||.|+++|+-+-.
T Consensus 3 ay~~~P~~~--~~~~~Vvv~~d~~G~~~~~-----~~~ad~lA~~Gy~v~~pD~f~~~ 53 (218)
T PF01738_consen 3 AYVARPEGG--GPRPAVVVIHDIFGLNPNI-----RDLADRLAEEGYVVLAPDLFGGR 53 (218)
T ss_dssp EEEEEETTS--SSEEEEEEE-BTTBS-HHH-----HHHHHHHHHTT-EEEEE-CCCCT
T ss_pred EEEEeCCCC--CCCCEEEEEcCCCCCchHH-----HHHHHHHHhcCCCEEecccccCC
Confidence 455666643 3456799999876543222 35899999999999999985433
No 212
>PLN02802 triacylglycerol lipase
Probab=88.29 E-value=0.64 Score=51.08 Aligned_cols=39 Identities=21% Similarity=0.310 Sum_probs=27.6
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHh
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 400 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~ 400 (601)
+++.+-|..+..++.-...+|++.|||+||.+|...|..
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 455555666655543222379999999999999988765
No 213
>PLN02761 lipase class 3 family protein
Probab=87.03 E-value=0.95 Score=49.93 Aligned_cols=39 Identities=21% Similarity=0.210 Sum_probs=28.3
Q ss_pred hhHHHHHHHHHHHcC----CCCCcEEEEEEchhHHHHHHHHHh
Q 007502 362 EDVPAAMEYIRAQSK----PKDGKLLAIGHSMGGILLYAMLSR 400 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g----~~~~kv~LVGHSmGG~IAl~~Aa~ 400 (601)
+++...|..+...++ -.+.+|++.||||||.+|...|..
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 566666666666542 122479999999999999988754
No 214
>PLN02934 triacylglycerol lipase
Probab=86.78 E-value=0.9 Score=49.99 Aligned_cols=37 Identities=24% Similarity=0.416 Sum_probs=28.4
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHh
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 400 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~ 400 (601)
+.+...++.+.+++ ++.++++.|||+||.+|..++..
T Consensus 305 ~~v~~~lk~ll~~~--p~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 305 YAVRSKLKSLLKEH--KNAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHHHHC--CCCeEEEeccccHHHHHHHHHHH
Confidence 45666777766664 34589999999999999988743
No 215
>PLN02310 triacylglycerol lipase
Probab=86.67 E-value=0.88 Score=48.93 Aligned_cols=21 Identities=33% Similarity=0.409 Sum_probs=18.5
Q ss_pred CcEEEEEEchhHHHHHHHHHh
Q 007502 380 GKLLAIGHSMGGILLYAMLSR 400 (601)
Q Consensus 380 ~kv~LVGHSmGG~IAl~~Aa~ 400 (601)
.+|++.||||||.+|+..|..
T Consensus 209 ~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHH
Confidence 379999999999999988754
No 216
>PLN02753 triacylglycerol lipase
Probab=86.57 E-value=0.93 Score=50.04 Aligned_cols=39 Identities=21% Similarity=0.301 Sum_probs=28.6
Q ss_pred hhHHHHHHHHHHHcCC---CCCcEEEEEEchhHHHHHHHHHh
Q 007502 362 EDVPAAMEYIRAQSKP---KDGKLLAIGHSMGGILLYAMLSR 400 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~---~~~kv~LVGHSmGG~IAl~~Aa~ 400 (601)
+.+.+.|+.+..+++. ++.+|++.|||+||.+|+..|..
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 5666666666665432 23489999999999999988854
No 217
>PLN02719 triacylglycerol lipase
Probab=84.94 E-value=1.2 Score=48.98 Aligned_cols=39 Identities=21% Similarity=0.276 Sum_probs=28.4
Q ss_pred hhHHHHHHHHHHHcCC---CCCcEEEEEEchhHHHHHHHHHh
Q 007502 362 EDVPAAMEYIRAQSKP---KDGKLLAIGHSMGGILLYAMLSR 400 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~---~~~kv~LVGHSmGG~IAl~~Aa~ 400 (601)
+++.+.|..+...++. .+.+|++.|||+||.+|...|..
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 5666666666665431 12379999999999999988854
No 218
>PLN02847 triacylglycerol lipase
Probab=84.72 E-value=1.4 Score=49.38 Aligned_cols=37 Identities=19% Similarity=0.130 Sum_probs=25.4
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHh
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 400 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~ 400 (601)
+.+...+..+...+ ++-+++++||||||.+|..++..
T Consensus 235 ~~i~~~L~kal~~~--PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 235 KLSTPCLLKALDEY--PDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHHC--CCCeEEEeccChHHHHHHHHHHH
Confidence 44444444444442 33489999999999999988765
No 219
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=83.92 E-value=9.1 Score=41.22 Aligned_cols=62 Identities=19% Similarity=0.137 Sum_probs=40.7
Q ss_pred hhhhhhHHHHHHHHHHHcC-CCCCcEEEEEEchhHHHHHHHHHhCC--C------ccccceeEEEccCCCCC
Q 007502 358 HYLEEDVPAAMEYIRAQSK-PKDGKLLAIGHSMGGILLYAMLSRCG--R------ESRLAAIVTLASSLDYT 420 (601)
Q Consensus 358 ~~a~~Dl~a~Id~L~~~~g-~~~~kv~LVGHSmGG~IAl~~Aa~~P--~------~~~V~~lVllap~~~~~ 420 (601)
+.+ +|+..++.....+++ ....+++|.|-|.||..+-.+|.+-- . .-.++++++.++.+++.
T Consensus 114 ~~a-~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp~ 184 (415)
T PF00450_consen 114 QAA-EDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDPR 184 (415)
T ss_dssp HHH-HHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBHH
T ss_pred HHH-HHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCcccccc
Confidence 444 777777766555532 23348999999999987666554310 1 35688999999887763
No 220
>PLN03037 lipase class 3 family protein; Provisional
Probab=83.22 E-value=1.6 Score=48.27 Aligned_cols=21 Identities=33% Similarity=0.395 Sum_probs=18.4
Q ss_pred CcEEEEEEchhHHHHHHHHHh
Q 007502 380 GKLLAIGHSMGGILLYAMLSR 400 (601)
Q Consensus 380 ~kv~LVGHSmGG~IAl~~Aa~ 400 (601)
.++++.||||||.+|+..|..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 379999999999999988854
No 221
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=82.80 E-value=1.9 Score=43.76 Aligned_cols=43 Identities=26% Similarity=0.427 Sum_probs=32.5
Q ss_pred hhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCC
Q 007502 357 DHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCG 402 (601)
Q Consensus 357 ~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P 402 (601)
+.|- .+...++..++.. +++.++.|-|||+||.+|..+..++.
T Consensus 256 dryy-Sa~ldI~~~v~~~--Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 256 DRYY-SAALDILGAVRRI--YPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred cchh-HHHHHHHHHHHHh--CCCceEEEeccccchHHHHHhccccC
Confidence 3443 5666666666666 34569999999999999999888854
No 222
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=82.80 E-value=1.9 Score=43.76 Aligned_cols=43 Identities=26% Similarity=0.427 Sum_probs=32.5
Q ss_pred hhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCC
Q 007502 357 DHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCG 402 (601)
Q Consensus 357 ~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P 402 (601)
+.|- .+...++..++.. +++.++.|-|||+||.+|..+..++.
T Consensus 256 dryy-Sa~ldI~~~v~~~--Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 256 DRYY-SAALDILGAVRRI--YPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred cchh-HHHHHHHHHHHHh--CCCceEEEeccccchHHHHHhccccC
Confidence 3443 5666666666666 34569999999999999999888854
No 223
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=81.54 E-value=5.9 Score=41.73 Aligned_cols=62 Identities=16% Similarity=0.291 Sum_probs=46.9
Q ss_pred CCCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCCceEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhh
Q 007502 524 HKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 597 (601)
Q Consensus 524 ~~I~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~~ 597 (601)
.++.+|-.|+.|..|.+.+++.+.-.++.+|+. +-+.++ ++..|.. .++.+.+.+..|+.+.
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~-kaLrmv-----PN~~H~~------~n~~i~esl~~flnrf 387 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGE-KALRMV-----PNDPHNL------INQFIKESLEPFLNRF 387 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCc-eeeeeC-----CCCcchh------hHHHHHHHHHHHHHHH
Confidence 567899999999999999999999999999974 456665 7777765 3345555666666543
No 224
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=77.27 E-value=24 Score=38.67 Aligned_cols=62 Identities=15% Similarity=0.208 Sum_probs=43.9
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHCCCCc-----------------------eEEEEecCCCCCCCCcccccccccch
Q 007502 527 NIPILAIAGDQDLICPPEAVEETVKLLPEDL-----------------------VTYKVFGEPSGPHYAHYDLVGGRMAV 583 (601)
Q Consensus 527 ~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~-----------------------~~l~vi~~~~~~h~gH~dfi~g~~~p 583 (601)
.++|||..|+.|.+||.-..+.+.+.+.-.. -++..+ ...||+- . ..|
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V-----~~AGHmV---p-~qP 417 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATI-----KAGGHTA---E-YRP 417 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEE-----cCCCCCC---C-CCH
Confidence 4799999999999999998888887775210 111222 3455542 1 379
Q ss_pred hhHHHHHHHHHhhh
Q 007502 584 EQVYPCIVQFLGRY 597 (601)
Q Consensus 584 e~v~~~I~eFL~~~ 597 (601)
+...+.+..||...
T Consensus 418 ~~al~m~~~Fi~~~ 431 (433)
T PLN03016 418 NETFIMFQRWISGQ 431 (433)
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999999754
No 225
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=75.84 E-value=34 Score=38.50 Aligned_cols=56 Identities=11% Similarity=0.140 Sum_probs=38.8
Q ss_pred hhhHHHHHHHHHHH---cCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccC
Q 007502 361 EEDVPAAMEYIRAQ---SKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASS 416 (601)
Q Consensus 361 ~~Dl~a~Id~L~~~---~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~ 416 (601)
..|...++++++.. +|-++.+|.|+|||.||..+..+....-....+.++|..++.
T Consensus 173 l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 173 LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 36777888888775 455667999999999999997766541122445566665544
No 226
>PLN02209 serine carboxypeptidase
Probab=75.47 E-value=32 Score=37.86 Aligned_cols=66 Identities=15% Similarity=0.209 Sum_probs=44.0
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHCCCCce-EEEEe-----------cCCC------CCCCCcccccccccchhhHHH
Q 007502 527 NIPILAIAGDQDLICPPEAVEETVKLLPEDLV-TYKVF-----------GEPS------GPHYAHYDLVGGRMAVEQVYP 588 (601)
Q Consensus 527 ~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~-~l~vi-----------~~~~------~~h~gH~dfi~g~~~pe~v~~ 588 (601)
.++|||..|+.|.+|+.-..+.+.+.+.-... .+..+ ...+ ....||+ + . ..|+...+
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHm--V-p-~qP~~al~ 426 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHT--A-E-YLPEESSI 426 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCC--c-C-cCHHHHHH
Confidence 47999999999999999988888877752100 00000 0011 2346664 2 2 38999999
Q ss_pred HHHHHHhh
Q 007502 589 CIVQFLGR 596 (601)
Q Consensus 589 ~I~eFL~~ 596 (601)
.+.+|+..
T Consensus 427 m~~~fi~~ 434 (437)
T PLN02209 427 MFQRWISG 434 (437)
T ss_pred HHHHHHcC
Confidence 99999965
No 227
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=74.93 E-value=2.2 Score=43.91 Aligned_cols=37 Identities=19% Similarity=0.295 Sum_probs=32.3
Q ss_pred cEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCC
Q 007502 381 KLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDY 419 (601)
Q Consensus 381 kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~ 419 (601)
.-+|+|.|+||.+++..+.+|| +.+..++..+|...-
T Consensus 178 ~r~L~G~SlGG~vsL~agl~~P--e~FG~V~s~Sps~~~ 214 (299)
T COG2382 178 GRVLAGDSLGGLVSLYAGLRHP--ERFGHVLSQSGSFWW 214 (299)
T ss_pred CcEEeccccccHHHHHHHhcCc--hhhceeeccCCcccc
Confidence 4689999999999999999977 999999998887543
No 228
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=73.89 E-value=57 Score=36.03 Aligned_cols=58 Identities=16% Similarity=0.078 Sum_probs=44.7
Q ss_pred CchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCC
Q 007502 355 DFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSL 417 (601)
Q Consensus 355 s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~ 417 (601)
+-++|- .-+..+|+.-.+.+|.+...++|-|-|||..=|+.+++.. .-.++|+--|.+
T Consensus 333 Gs~eyE-~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l----~P~AIiVgKPL~ 390 (511)
T TIGR03712 333 GSDEYE-QGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKL----SPHAIIVGKPLV 390 (511)
T ss_pred CcHHHH-HHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccC----CCceEEEcCccc
Confidence 345664 7788888888888899888999999999999999999883 345665543443
No 229
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=72.10 E-value=5 Score=42.49 Aligned_cols=36 Identities=19% Similarity=0.248 Sum_probs=25.3
Q ss_pred hHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHh
Q 007502 363 DVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 400 (601)
Q Consensus 363 Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~ 400 (601)
.+.+.++.|...++ +-++.+-|||+||.+|...|..
T Consensus 156 ~~~~~~~~L~~~~~--~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 156 GLDAELRRLIELYP--NYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHhcC--CcEEEEecCChHHHHHHHHHHH
Confidence 44444444444433 3489999999999999988765
No 230
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=67.71 E-value=7.7 Score=34.12 Aligned_cols=35 Identities=17% Similarity=0.214 Sum_probs=19.1
Q ss_pred eCCCeEEEEEEeCCCCCCCCCCCcEEEecCCCCCCccc
Q 007502 88 ANCDWRLALWRYNPPPQAPTRNHPLLLLSGVGTNAIGY 125 (601)
Q Consensus 88 ~~~~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~ 125 (601)
.-+|..|+..+-.+. .+..-||||+|||.++-.-|
T Consensus 74 ~I~g~~iHFih~rs~---~~~aiPLll~HGWPgSf~Ef 108 (112)
T PF06441_consen 74 EIDGLDIHFIHVRSK---RPNAIPLLLLHGWPGSFLEF 108 (112)
T ss_dssp EETTEEEEEEEE--S----TT-EEEEEE--SS--GGGG
T ss_pred EEeeEEEEEEEeeCC---CCCCeEEEEECCCCccHHhH
Confidence 336888888776653 22456999999999876543
No 231
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=63.36 E-value=1.9 Score=46.05 Aligned_cols=17 Identities=35% Similarity=0.671 Sum_probs=14.6
Q ss_pred cEEEEEEchhHHHHHHH
Q 007502 381 KLLAIGHSMGGILLYAM 397 (601)
Q Consensus 381 kv~LVGHSmGG~IAl~~ 397 (601)
++..||||+||.++-.+
T Consensus 151 kISfvghSLGGLvar~A 167 (405)
T KOG4372|consen 151 KISFVGHSLGGLVARYA 167 (405)
T ss_pred eeeeeeeecCCeeeeEE
Confidence 89999999999887643
No 232
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=62.87 E-value=13 Score=30.32 Aligned_cols=54 Identities=11% Similarity=-0.010 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHcCCeeccccccchhhhhhhcHHHHHhcccceeeeCCCchhhhhhhHHHHHH
Q 007502 303 AIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAME 369 (601)
Q Consensus 303 ~~~~~~la~~l~~la~~Gy~viaPdl~~~~~~l~~~~~~~~~~~~~l~~~d~s~~~~a~~Dl~a~Id 369 (601)
..+.....+....|+++||.|++.|..|++.+-+ ...+--+|++++ +|+..+++
T Consensus 26 ~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g------------~rg~~~~~~~~v-~D~~~~~~ 79 (79)
T PF12146_consen 26 GEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEG------------KRGHIDSFDDYV-DDLHQFIQ 79 (79)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCC------------cccccCCHHHHH-HHHHHHhC
Confidence 3334444444444499999999999999987611 111223577887 88887764
No 233
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=62.73 E-value=18 Score=35.97 Aligned_cols=61 Identities=21% Similarity=0.306 Sum_probs=34.9
Q ss_pred CchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCC----ccccceeEEEccC
Q 007502 355 DFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGR----ESRLAAIVTLASS 416 (601)
Q Consensus 355 s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~----~~~V~~lVllap~ 416 (601)
++++-+.+=+..+.+.+..... .+++++++|+|+|+.++...+.+... ....-.+|+++-+
T Consensus 24 t~~~Sv~~G~~~L~~ai~~~~~-~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP 88 (225)
T PF08237_consen 24 TYDESVAEGVANLDAAIRAAIA-AGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNP 88 (225)
T ss_pred ccchHHHHHHHHHHHHHHhhcc-CCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCC
Confidence 4444432333334444444322 34589999999999999988766420 1122346666654
No 234
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=62.17 E-value=11 Score=42.29 Aligned_cols=53 Identities=26% Similarity=0.344 Sum_probs=33.1
Q ss_pred hHHHHHHHHHHHcCCC-CCcEEEEEEchhHHHHHHHHHh-----CC----CccccceeEEEccC
Q 007502 363 DVPAAMEYIRAQSKPK-DGKLLAIGHSMGGILLYAMLSR-----CG----RESRLAAIVTLASS 416 (601)
Q Consensus 363 Dl~a~Id~L~~~~g~~-~~kv~LVGHSmGG~IAl~~Aa~-----~P----~~~~V~~lVllap~ 416 (601)
-..++++.|... ++. +++++.|||||||.++=.+... .| .....+++|.++.+
T Consensus 509 Rs~~lleql~~~-~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 509 RSNELLEQLQAA-GVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHh-ccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 334566666554 343 5799999999999887665543 12 12335567766654
No 235
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=56.38 E-value=12 Score=41.50 Aligned_cols=57 Identities=16% Similarity=0.115 Sum_probs=43.3
Q ss_pred hhHHHHHHHHH-HHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCCC
Q 007502 362 EDVPAAMEYIR-AQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDYT 420 (601)
Q Consensus 362 ~Dl~a~Id~L~-~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~~ 420 (601)
.++..+-+.|. .-+|.++..-+..|-|-||.-++..|.+|| +.+++||.-+|.....
T Consensus 96 h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP--~dfDGIlAgaPA~~~~ 153 (474)
T PF07519_consen 96 HETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYP--EDFDGILAGAPAINWT 153 (474)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhCh--hhcCeEEeCCchHHHH
Confidence 33333334333 335656678999999999999999999987 9999999999887653
No 236
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=49.24 E-value=40 Score=37.32 Aligned_cols=63 Identities=19% Similarity=0.201 Sum_probs=44.7
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHCCCCc---------------------------------eEEEEecCCCCCCCCc
Q 007502 527 NIPILAIAGDQDLICPPEAVEETVKLLPEDL---------------------------------VTYKVFGEPSGPHYAH 573 (601)
Q Consensus 527 ~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~---------------------------------~~l~vi~~~~~~h~gH 573 (601)
.++|||..|+.|.+++.-..+++.+.+.-.. .+++.+ .+++|..+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V--~~AGH~vp 441 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQV--YNAGHMVP 441 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEE--CCCCccCh
Confidence 4899999999999999988888877665110 011111 34555555
Q ss_pred ccccccccchhhHHHHHHHHHhhh
Q 007502 574 YDLVGGRMAVEQVYPCIVQFLGRY 597 (601)
Q Consensus 574 ~dfi~g~~~pe~v~~~I~eFL~~~ 597 (601)
.+ .|+.+.+.|..|+...
T Consensus 442 ~d------~P~~~~~~i~~fl~~~ 459 (462)
T PTZ00472 442 MD------QPAVALTMINRFLRNR 459 (462)
T ss_pred hh------HHHHHHHHHHHHHcCC
Confidence 54 8999999999999753
No 237
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=48.74 E-value=32 Score=38.05 Aligned_cols=54 Identities=11% Similarity=0.247 Sum_probs=36.3
Q ss_pred HHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCC---CccccceeEEEccCCCCCC
Q 007502 367 AMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCG---RESRLAAIVTLASSLDYTS 421 (601)
Q Consensus 367 ~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P---~~~~V~~lVllap~~~~~~ 421 (601)
+.+.|+.+. ...+||.|||+|+|+.+.+.++.... .-.-|..++++++++....
T Consensus 435 LAe~L~~r~-qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~ 491 (633)
T KOG2385|consen 435 LAEALCKRS-QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKA 491 (633)
T ss_pred HHHHHHHhc-cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCH
Confidence 334444442 22359999999999999986665321 2345888999998876543
No 238
>PF07167 PhaC_N: Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus; InterPro: IPR010941 This entry represents the central domain of the bacterial poly-beta-hydroxybutyrate polymerase (PhaC). Polyhydroxyalkanoic acids (PHAs) are carbon and energy reserve polymers produced in some bacteria when carbon sources are plentiful and another nutrient, such as nitrogen, phosphate, oxygen, or sulphur, becomes limiting. PHAs composed of monomeric units ranging from 3 to 14 carbons exist in nature. When the carbon source is exhausted, PHA is utilised by the bacterium. PhaC links D-(-)-3-hydroxybutyrl-CoA to an existing PHA molecule by the formation of an ester bond [].; GO: 0016746 transferase activity, transferring acyl groups, 0042619 poly-hydroxybutyrate biosynthetic process
Probab=42.73 E-value=23 Score=33.60 Aligned_cols=44 Identities=30% Similarity=0.498 Sum_probs=36.2
Q ss_pred EEEEEEeCCCCCCCCCCCcEEEecCCCCCCcccccCCCCcHHHHH
Q 007502 93 RLALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYM 137 (601)
Q Consensus 93 ~l~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~a~~l 137 (601)
.+.|.+|.|... ....-|||++.-+-.--...||+|+.||.+||
T Consensus 129 l~eLiqY~P~T~-~v~~~PlLIvPp~InKyYIlDL~p~~SlVr~l 172 (172)
T PF07167_consen 129 LMELIQYAPTTE-KVHARPLLIVPPWINKYYILDLSPENSLVRYL 172 (172)
T ss_pred ceEEEeecCCCC-CccceeEEeecchhchhheeecCCCcchhhcC
Confidence 467889998743 33577999999998877889999999999885
No 239
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=39.17 E-value=1.7e+02 Score=28.23 Aligned_cols=37 Identities=8% Similarity=0.401 Sum_probs=26.5
Q ss_pred CCcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeC
Q 007502 109 NHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILE 148 (601)
Q Consensus 109 ~~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d 148 (601)
++.+|.+-|+.+++-. .-..-+.+.|.++|+.|+++|
T Consensus 22 ~~~viW~TGLSGsGKS---TiA~ale~~L~~~G~~~y~LD 58 (197)
T COG0529 22 KGAVIWFTGLSGSGKS---TIANALEEKLFAKGYHVYLLD 58 (197)
T ss_pred CCeEEEeecCCCCCHH---HHHHHHHHHHHHcCCeEEEec
Confidence 3458888888776521 012357788999999999998
No 240
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=36.56 E-value=63 Score=34.53 Aligned_cols=68 Identities=15% Similarity=0.278 Sum_probs=47.0
Q ss_pred CCCeEEEEEEeCCCCCC------------CCCCCcEEEecCCCCCCcccccCCCC--cHHHHHHhCCCeEEEeCCCCCCC
Q 007502 89 NCDWRLALWRYNPPPQA------------PTRNHPLLLLSGVGTNAIGYDLSPGS--SFARYMAGQGFDTWILEVRGAGL 154 (601)
Q Consensus 89 ~~~~~l~~~~~~p~~~~------------~~~~~p~~llhG~~~~~~~~~~~~~~--~~a~~l~~~G~~v~~~d~rg~g~ 154 (601)
..|.++.-|+|--.... .-...-||||||-..|..+.|+.+.. .++.-+.++|+ +-++|.-=.|.
T Consensus 139 ~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~l-ip~~D~AYQGF 217 (396)
T COG1448 139 AAGLEVETYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGL-IPFFDIAYQGF 217 (396)
T ss_pred hcCCceeeeeccccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCC-eeeeehhhhhh
Confidence 56888888877544321 11245699999999999999987543 57788888886 44567765555
Q ss_pred CCC
Q 007502 155 SVR 157 (601)
Q Consensus 155 S~~ 157 (601)
-++
T Consensus 218 ~~G 220 (396)
T COG1448 218 ADG 220 (396)
T ss_pred ccc
Confidence 444
No 241
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=35.77 E-value=1.3e+02 Score=33.12 Aligned_cols=41 Identities=22% Similarity=0.347 Sum_probs=28.6
Q ss_pred ceEEEEeeC-CCeEEEEEEeCCCCCCCCCCCcEEEecCCCCCC
Q 007502 81 ELHYVSVAN-CDWRLALWRYNPPPQAPTRNHPLLLLSGVGTNA 122 (601)
Q Consensus 81 ~~~~~~~~~-~~~~l~~~~~~p~~~~~~~~~p~~llhG~~~~~ 122 (601)
+--|+.|.. .|..|..|-+... ..|...|.||.|.|..+.+
T Consensus 45 ysGYv~v~~~~~~~LFYwf~eS~-~~P~~dPlvLWLnGGPGCS 86 (454)
T KOG1282|consen 45 YSGYVTVNESEGRQLFYWFFESE-NNPETDPLVLWLNGGPGCS 86 (454)
T ss_pred ccceEECCCCCCceEEEEEEEcc-CCCCCCCEEEEeCCCCCcc
Confidence 445888874 6788999955443 5555566666799987765
No 242
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=33.74 E-value=56 Score=33.54 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=25.2
Q ss_pred ecCCCCCCcccccCCCCcHHHHHHhCCCeEEEe------CCCCCCCCCCCC
Q 007502 115 LSGVGTNAIGYDLSPGSSFARYMAGQGFDTWIL------EVRGAGLSVRGS 159 (601)
Q Consensus 115 lhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~------d~rg~g~S~~~~ 159 (601)
.||.-+|+. -..-|...|++||.+ ++.|+|...+..
T Consensus 11 v~G~vGn~A---------A~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v 52 (281)
T COG2240 11 VYGSVGNSA---------AIFPLQRLGLDVWAVPTVQFSNHTGYGKWTGIV 52 (281)
T ss_pred eecccccHh---------HHHHHHHcCCceeeeceEEecCCCCCCCCCCcC
Confidence 456666543 234478899999987 689999877654
No 243
>PHA02857 monoglyceride lipase; Provisional
Probab=33.46 E-value=47 Score=33.22 Aligned_cols=26 Identities=19% Similarity=0.229 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHcCCeeccccccchhhh
Q 007502 306 IRDLSQNLVNMIEEGQLSVSPQLFDLQER 334 (601)
Q Consensus 306 ~~~la~~l~~la~~Gy~viaPdl~~~~~~ 334 (601)
+..+++.| +..||+|+++|+.||+.+
T Consensus 41 ~~~~~~~l---~~~g~~via~D~~G~G~S 66 (276)
T PHA02857 41 YEELAENI---SSLGILVFSHDHIGHGRS 66 (276)
T ss_pred HHHHHHHH---HhCCCEEEEccCCCCCCC
Confidence 66666666 888999999999999864
No 244
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=31.01 E-value=33 Score=32.30 Aligned_cols=34 Identities=29% Similarity=0.514 Sum_probs=25.9
Q ss_pred CCCcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEE
Q 007502 108 RNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWI 146 (601)
Q Consensus 108 ~~~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~ 146 (601)
..+.|++|-|-|.|+.. +...||+|..+||+|.+
T Consensus 24 ~~~~v~il~G~GnNGgD-----gl~~AR~L~~~G~~V~v 57 (169)
T PF03853_consen 24 KGPRVLILCGPGNNGGD-----GLVAARHLANRGYNVTV 57 (169)
T ss_dssp TT-EEEEEE-SSHHHHH-----HHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEEECCCCChHH-----HHHHHHHHHHCCCeEEE
Confidence 35679999999988751 23789999999999888
No 245
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=30.64 E-value=86 Score=33.58 Aligned_cols=60 Identities=25% Similarity=0.236 Sum_probs=39.8
Q ss_pred CCEEEEEeCCCCCCCHHHHHHHHHHCCCCce------------------------EEEEecCCCCCCCCcccccccccch
Q 007502 528 IPILAIAGDQDLICPPEAVEETVKLLPEDLV------------------------TYKVFGEPSGPHYAHYDLVGGRMAV 583 (601)
Q Consensus 528 vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~~------------------------~l~vi~~~~~~h~gH~dfi~g~~~p 583 (601)
++|||.+|..|.++|.-..+.+.+.+.-..+ ++..+ ...||+- ..+.|
T Consensus 331 irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V-----~~AGHmv---P~dqP 402 (415)
T PF00450_consen 331 IRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTV-----RGAGHMV---PQDQP 402 (415)
T ss_dssp -EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEE-----TT--SSH---HHHSH
T ss_pred ceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEE-----cCCcccC---hhhCH
Confidence 8999999999999999999999887753211 12233 2444431 23489
Q ss_pred hhHHHHHHHHHh
Q 007502 584 EQVYPCIVQFLG 595 (601)
Q Consensus 584 e~v~~~I~eFL~ 595 (601)
+...+.+..||+
T Consensus 403 ~~a~~m~~~fl~ 414 (415)
T PF00450_consen 403 EAALQMFRRFLK 414 (415)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhc
Confidence 999999999986
No 246
>COG1166 SpeA Arginine decarboxylase (spermidine biosynthesis) [Amino acid transport and metabolism]
Probab=28.28 E-value=1.7e+02 Score=32.93 Aligned_cols=106 Identities=16% Similarity=0.075 Sum_probs=66.8
Q ss_pred hhhhhhhhhhHHHhhhhhh----hhhhhchh------HHHHHHHHHHHHHHHHHHcCCeeccccccchhh-hhhhcHHHH
Q 007502 274 LEDSQLSEGFNEIRGKLSS----LLERRQSS------AIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQE-RLFSTIDDF 342 (601)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~------~~~~~~~~la~~l~~la~~Gy~viaPdl~~~~~-~l~~~~~~~ 342 (601)
+..+++.+-.+..+++.+- +|+..=.+ -+-..++.-+..|+.|.+.|-..-+.|..|-.+ .|.++-...
T Consensus 241 Lsa~qvL~~v~~Lre~~~Ld~l~llHFHlGSQisnI~~ik~~~rEA~r~YvEL~klGa~i~~~dVGGGLgVDYdGt~t~~ 320 (652)
T COG1166 241 LSATQVLQVVERLREANLLDSLQLLHFHLGSQISNIRDIKTGVREAARFYVELRKLGANIKYFDVGGGLGVDYDGTRTQS 320 (652)
T ss_pred CCHHHHHHHHHHHHhcchHHhhHHHhhhhcchhhhhHHHHHHHHHHHHHHHHHHHcCCCceEEeccCceeecccCccccc
Confidence 5555665555555644332 66666333 334778888999999999998766655543111 011111111
Q ss_pred HhcccceeeeCCCchhhhhhhHHHHHHHHHHHcCCCCCcEEEEEEc
Q 007502 343 QKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHS 388 (601)
Q Consensus 343 ~~~~~~l~~~d~s~~~~a~~Dl~a~Id~L~~~~g~~~~kv~LVGHS 388 (601)
-..-+|++++|+ .|+...+..++...+.+ ...++--|
T Consensus 321 ------~~S~NY~l~eYA-~dVV~~l~d~C~~~~~p--~P~IisES 357 (652)
T COG1166 321 ------DCSKNYGLNEYA-NDVVWALKDACEEKGLP--HPTIISES 357 (652)
T ss_pred ------cccccCCHHHHH-HHHHHHHHHHHHhcCCC--CCeEEeec
Confidence 112258999999 99999999999998876 55676555
No 247
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=27.90 E-value=2.1e+02 Score=29.80 Aligned_cols=62 Identities=15% Similarity=0.208 Sum_probs=43.7
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHCCCCc-----------------------eEEEEecCCCCCCCCcccccccccch
Q 007502 527 NIPILAIAGDQDLICPPEAVEETVKLLPEDL-----------------------VTYKVFGEPSGPHYAHYDLVGGRMAV 583 (601)
Q Consensus 527 ~vPVLII~Ge~D~iVp~e~~~~l~~~lp~~~-----------------------~~l~vi~~~~~~h~gH~dfi~g~~~p 583 (601)
.++|||..|+.|.+|+.-..+.+.+.+.-.. -++..+ ...||+- . ..|
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V-----~~AGHmV---~-~qP 303 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATI-----KAGGHTA---E-YRP 303 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEE-----cCCCCCC---C-cCH
Confidence 4899999999999999998888888775210 011111 2455642 1 379
Q ss_pred hhHHHHHHHHHhhh
Q 007502 584 EQVYPCIVQFLGRY 597 (601)
Q Consensus 584 e~v~~~I~eFL~~~ 597 (601)
+...+.+..||...
T Consensus 304 ~~al~m~~~fi~~~ 317 (319)
T PLN02213 304 NETFIMFQRWISGQ 317 (319)
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999999753
No 248
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=27.81 E-value=1.7e+02 Score=30.56 Aligned_cols=58 Identities=10% Similarity=0.119 Sum_probs=35.0
Q ss_pred hhHHHHHHHHHHHc-CCCCCcEEEEEEchhHHHHHHHHHhCC--C------ccccceeEEEccCCCC
Q 007502 362 EDVPAAMEYIRAQS-KPKDGKLLAIGHSMGGILLYAMLSRCG--R------ESRLAAIVTLASSLDY 419 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~-g~~~~kv~LVGHSmGG~IAl~~Aa~~P--~------~~~V~~lVllap~~~~ 419 (601)
+|+..++.....++ .....+++|.|-|.||..+-.+|.+-- . +-.++++++-++..++
T Consensus 32 ~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 32 KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYM 98 (319)
T ss_pred HHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCCc
Confidence 44444444433332 223458999999999987666664310 0 2357788877776654
No 249
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=25.32 E-value=79 Score=31.27 Aligned_cols=35 Identities=23% Similarity=0.493 Sum_probs=30.0
Q ss_pred CCcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCC
Q 007502 109 NHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEV 149 (601)
Q Consensus 109 ~~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~ 149 (601)
.++++|+-|-....++| .+|+.|+..||.|++---
T Consensus 6 ~~k~VlItgcs~GGIG~------ala~ef~~~G~~V~AtaR 40 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGY------ALAKEFARNGYLVYATAR 40 (289)
T ss_pred CCCeEEEeecCCcchhH------HHHHHHHhCCeEEEEEcc
Confidence 45799999999989988 489999999999998643
No 250
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=25.25 E-value=4.1e+02 Score=26.47 Aligned_cols=39 Identities=10% Similarity=0.169 Sum_probs=28.0
Q ss_pred CCcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCCC
Q 007502 109 NHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVR 150 (601)
Q Consensus 109 ~~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~r 150 (601)
.+.||++.|+.+.+-+-.. ..+...|-.+||.|+.+.-+
T Consensus 30 ~~vlIv~eG~DaAGKg~~I---~~l~~~lDPRg~~v~~~~~p 68 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTI---KRITEHLNPRGARVVALPKP 68 (230)
T ss_pred CCEEEEEeCCCCCCchHHH---HHHHHhcCCCeeEEEeCCCC
Confidence 4678889999988765432 24667777888888887554
No 251
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=25.02 E-value=70 Score=33.50 Aligned_cols=26 Identities=19% Similarity=0.183 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHcCCeeccccccchhhh
Q 007502 306 IRDLSQNLVNMIEEGQLSVSPQLFDLQER 334 (601)
Q Consensus 306 ~~~la~~l~~la~~Gy~viaPdl~~~~~~ 334 (601)
+|.+...| +..||+|++||+.|++.+
T Consensus 60 wr~q~~~l---a~~~~rviA~DlrGyG~S 85 (322)
T KOG4178|consen 60 WRHQIPGL---ASRGYRVIAPDLRGYGFS 85 (322)
T ss_pred hhhhhhhh---hhcceEEEecCCCCCCCC
Confidence 66666666 999999999999998865
No 252
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=24.91 E-value=97 Score=34.47 Aligned_cols=65 Identities=12% Similarity=0.103 Sum_probs=42.5
Q ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHC----CCC----c--eEEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 007502 527 NIPILAIAGDQDLICPPEAVEETVKLL----PED----L--VTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 596 (601)
Q Consensus 527 ~vPVLII~Ge~D~iVp~e~~~~l~~~l----p~~----~--~~l~vi~~~~~~h~gH~dfi~g~~~pe~v~~~I~eFL~~ 596 (601)
--.+++.||..|.+||+.....+++.+ ... . .++..+ |..+|+.--.+ ..+-.....|.+|.++
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~v-----PGm~HC~gG~g-~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMV-----PGMGHCGGGPG-PDPFDALTALVDWVEN 426 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEec-----CCCcccCCCCC-CCCCCHHHHHHHHHhC
Confidence 357899999999999999887766544 221 1 233333 55555542221 2345788999999986
Q ss_pred h
Q 007502 597 Y 597 (601)
Q Consensus 597 ~ 597 (601)
-
T Consensus 427 G 427 (474)
T PF07519_consen 427 G 427 (474)
T ss_pred C
Confidence 4
No 253
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=24.85 E-value=8.5e+02 Score=25.81 Aligned_cols=51 Identities=10% Similarity=0.137 Sum_probs=31.3
Q ss_pred hhHHHHHHHHHHHcCCCCCcEEEEEEchhHHHHHHHHHhCCCccccceeEE
Q 007502 362 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGRESRLAAIVT 412 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g~~~~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVl 412 (601)
+.+..+.+-++......+..+.++.-+.-|.-++.=|-.+-..-.+.++|+
T Consensus 241 ~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~eav~l~GiIl 291 (340)
T COG0552 241 DELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFNEAVGLDGIIL 291 (340)
T ss_pred HHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHHHhcCCceEEE
Confidence 666666666654432222347777788888888876655432345777776
No 254
>COG3605 PtsP Signal transduction protein containing GAF and PtsI domains [Signal transduction mechanisms]
Probab=24.30 E-value=5e+02 Score=29.70 Aligned_cols=35 Identities=14% Similarity=0.243 Sum_probs=27.9
Q ss_pred CcEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCCC
Q 007502 380 GKLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLDY 419 (601)
Q Consensus 380 ~kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~~ 419 (601)
+++++|.-+||+...+ .+| .+++.++|+..+....
T Consensus 328 e~aIlVarel~aa~L~----e~P-r~rL~GvVl~dGaanS 362 (756)
T COG3605 328 EDAILVARELGAAELL----EYP-RDRLRGVVLEDGAANS 362 (756)
T ss_pred cceEEEecccCHHHHh----hCc-hhhheeeeeecCcccc
Confidence 5899999999987654 556 6899999998876543
No 255
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=23.54 E-value=72 Score=31.42 Aligned_cols=28 Identities=25% Similarity=0.383 Sum_probs=21.0
Q ss_pred CcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCC
Q 007502 110 HPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEV 149 (601)
Q Consensus 110 ~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~ 149 (601)
..|+..-|.|.| |.+|+++||+|+.+|.
T Consensus 40 rvL~~gCG~G~d------------a~~LA~~G~~V~avD~ 67 (218)
T PRK13255 40 RVLVPLCGKSLD------------MLWLAEQGHEVLGVEL 67 (218)
T ss_pred eEEEeCCCChHh------------HHHHHhCCCeEEEEcc
Confidence 455556666544 5678999999999997
No 256
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.34 E-value=61 Score=30.82 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=31.8
Q ss_pred cEEEEEEchhHHHHHHHHHhCCCccccceeEEEccCCC
Q 007502 381 KLLAIGHSMGGILLYAMLSRCGRESRLAAIVTLASSLD 418 (601)
Q Consensus 381 kv~LVGHSmGG~IAl~~Aa~~P~~~~V~~lVllap~~~ 418 (601)
...+-|-||||..|..+..++| +...++|.+++.-+
T Consensus 102 s~~~sgcsmGayhA~nfvfrhP--~lftkvialSGvYd 137 (227)
T COG4947 102 STIVSGCSMGAYHAANFVFRHP--HLFTKVIALSGVYD 137 (227)
T ss_pred CccccccchhhhhhhhhheeCh--hHhhhheeecceee
Confidence 5788999999999999999977 89999999987643
No 257
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=23.08 E-value=52 Score=31.67 Aligned_cols=45 Identities=16% Similarity=0.211 Sum_probs=32.9
Q ss_pred CCCcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCCCCCCC
Q 007502 108 RNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGL 154 (601)
Q Consensus 108 ~~~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~rg~g~ 154 (601)
.++|++++||-......+. ....+++.|.+.|.++..+-++|.|-
T Consensus 143 ~~~P~li~hG~~D~~Vp~~--~s~~~~~~L~~~g~~~~~~~~p~~gH 187 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPS--QSLRLYNALRKAGKPVELLIFPGEGH 187 (213)
T ss_dssp GGSEEEEEEETTBSSSTTH--HHHHHHHHHHHTTSSEEEEEETT-SS
T ss_pred CCCCEEEEccCCCCccCHH--HHHHHHHHHHhcCCCEEEEEcCcCCC
Confidence 4689999999877665432 22468899999999888777776664
No 258
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=22.57 E-value=92 Score=31.41 Aligned_cols=33 Identities=30% Similarity=0.402 Sum_probs=26.4
Q ss_pred cEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeC
Q 007502 111 PLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILE 148 (601)
Q Consensus 111 p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d 148 (601)
.|+++-|-|.|+.. +.-.||+|..+||+|.++=
T Consensus 62 ~V~VlcG~GNNGGD-----Glv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 62 RVLLVCGPGNNGGD-----GLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred eEEEEECCCCCchh-----HHHHHHHHHHCCCeEEEEE
Confidence 58888999998751 2368999999999987664
No 259
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=22.16 E-value=2.7e+02 Score=30.63 Aligned_cols=58 Identities=10% Similarity=0.100 Sum_probs=34.1
Q ss_pred hhHHHHHHHHHHHcC-CCCCcEEEEEEchhHHHHHHHHHhCC--------CccccceeEEEccCCCC
Q 007502 362 EDVPAAMEYIRAQSK-PKDGKLLAIGHSMGGILLYAMLSRCG--------RESRLAAIVTLASSLDY 419 (601)
Q Consensus 362 ~Dl~a~Id~L~~~~g-~~~~kv~LVGHSmGG~IAl~~Aa~~P--------~~~~V~~lVllap~~~~ 419 (601)
+|+..++.....+.. ....+++|.|.|.||..+-.+|.+-- .+-.++++++-++..++
T Consensus 146 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~ 212 (433)
T PLN03016 146 KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYM 212 (433)
T ss_pred HHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCc
Confidence 444444443333321 12358999999999986666654310 02367788887776544
No 260
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=21.72 E-value=57 Score=37.58 Aligned_cols=60 Identities=15% Similarity=0.190 Sum_probs=42.7
Q ss_pred EEEEeCCCCCCCCCCCcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCCCCCCCCC
Q 007502 95 ALWRYNPPPQAPTRNHPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVRGAGLSV 156 (601)
Q Consensus 95 ~~~~~~p~~~~~~~~~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~rg~g~S~ 156 (601)
.++...|-..+..-+.|||||||........+ ...-|...|...|..|-.+-+++-|.+-
T Consensus 537 ~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~--q~~~~~~aL~~~g~~~~~~~~p~e~H~~ 596 (620)
T COG1506 537 KYEDRSPIFYADNIKTPLLLIHGEEDDRVPIE--QAEQLVDALKRKGKPVELVVFPDEGHGF 596 (620)
T ss_pred HHHhcChhhhhcccCCCEEEEeecCCccCChH--HHHHHHHHHHHcCceEEEEEeCCCCcCC
Confidence 34556666666667899999999887665443 2335788899999998877777555443
No 261
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=20.34 E-value=2.4e+02 Score=32.08 Aligned_cols=41 Identities=15% Similarity=0.192 Sum_probs=25.9
Q ss_pred CCCCCcEEEEEEchhHHHHHHHHHhCC--CccccceeEEEccC
Q 007502 376 KPKDGKLLAIGHSMGGILLYAMLSRCG--RESRLAAIVTLASS 416 (601)
Q Consensus 376 g~~~~kv~LVGHSmGG~IAl~~Aa~~P--~~~~V~~lVllap~ 416 (601)
|...++|+++|-|.||++++.++.+.- .-..-+++++.=++
T Consensus 465 G~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~p 507 (880)
T KOG4388|consen 465 GSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPP 507 (880)
T ss_pred CcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecCh
Confidence 444569999999999988776665521 11223566654443
No 262
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=20.15 E-value=1.3e+02 Score=31.38 Aligned_cols=37 Identities=24% Similarity=0.167 Sum_probs=23.8
Q ss_pred HHHHHHHHHcCCC--CCcEEEEEEchhHHHHHHHHHhCC
Q 007502 366 AAMEYIRAQSKPK--DGKLLAIGHSMGGILLYAMLSRCG 402 (601)
Q Consensus 366 a~Id~L~~~~g~~--~~kv~LVGHSmGG~IAl~~Aa~~P 402 (601)
.+++.|.++.|.+ +.-=.+.|.|+||.+|+.++..++
T Consensus 16 ~vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g~s 54 (312)
T cd07212 16 QMLIAIEKALGRPIRELFDWIAGTSTGGILALALLHGKS 54 (312)
T ss_pred HHHHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcCCC
Confidence 3455555544431 001268999999999999997644
No 263
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=20.12 E-value=1.1e+02 Score=30.51 Aligned_cols=34 Identities=26% Similarity=0.421 Sum_probs=26.5
Q ss_pred CcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCCC
Q 007502 110 HPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVR 150 (601)
Q Consensus 110 ~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~r 150 (601)
+|++++-|-+. .++ ..+++.|+++|++|++++-|
T Consensus 1 ~~~~lITGas~-gIG------~~~a~~l~~~G~~V~~~~~~ 34 (267)
T TIGR02685 1 APAAVVTGAAK-RIG------SSIAVALHQEGYRVVLHYHR 34 (267)
T ss_pred CCEEEEeCCCC-cHH------HHHHHHHHhCCCeEEEEcCC
Confidence 57899998653 344 36899999999999998654
No 264
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=20.03 E-value=1.7e+02 Score=29.18 Aligned_cols=37 Identities=14% Similarity=0.103 Sum_probs=24.7
Q ss_pred CcEEEecCCCCCCcccccCCCCcHHHHHHhCCCeEEEeCCC
Q 007502 110 HPLLLLSGVGTNAIGYDLSPGSSFARYMAGQGFDTWILEVR 150 (601)
Q Consensus 110 ~p~~llhG~~~~~~~~~~~~~~~~a~~l~~~G~~v~~~d~r 150 (601)
..||+|.=+-+.. .+--..+|..++..||.|+++|+-
T Consensus 40 ~~li~i~DvfG~~----~~n~r~~Adk~A~~Gy~v~vPD~~ 76 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQ----FPNTREGADKVALNGYTVLVPDFF 76 (242)
T ss_pred eEEEEEEeeeccc----cHHHHHHHHHHhcCCcEEEcchhh
Confidence 4566666443322 111235789999999999999974
Done!