BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007511
(601 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356538577|ref|XP_003537779.1| PREDICTED: uncharacterized protein yqeH-like [Glycine max]
Length = 592
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/584 (67%), Positives = 470/584 (80%), Gaps = 34/584 (5%)
Query: 5 ARNISQSKLKPIFHESFLTKI-----------TSPYLQLHPTKALKAPTSSSSSSSFSSQ 53
AR++S SKLKP+F+ S L + + P+LQ P K P S++ FSSQ
Sbjct: 4 ARSLSPSKLKPLFYLSILCECQNHFHSSLIPYSKPHLQNFP-KFYPQP-STNLFRFFSSQ 61
Query: 54 PTNTAPPPLSSSLALTRDGNYDEATPK-LTVCPGCGVLMQDTNPKHPGYFIRPSQ-NLNK 111
P ++ +L L+R+GNYDE + L VCPGCGV MQD+NPKHPGYFI+PS+ +L+
Sbjct: 62 PADSTE---KQNLPLSREGNYDEVNSQSLHVCPGCGVYMQDSNPKHPGYFIKPSEKDLSY 118
Query: 112 VRKSHLVHVANESEFSNSLKKGGLVVFEAE----NETSEVKKHEKPVVCARCHALRHYGK 167
++L VA E EFSN++K+G +V E E ++ + ++K EKPVVCARCH+LRHYGK
Sbjct: 119 RLYNNLEPVAQEPEFSNTVKRG--IVIEPEKLDDDDANLIRKPEKPVVCARCHSLRHYGK 176
Query: 168 VKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEE 227
VKD TVENLLPDFDFDHTVGRKL SASG RSVVLMVVD DFDGSFPRKVAK+VS T E+
Sbjct: 177 VKDPTVENLLPDFDFDHTVGRKLASASGTRSVVLMVVDVVDFDGSFPRKVAKLVSKTIED 236
Query: 228 NERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAV 287
+ AWK+GKSGNVPRVVLVVTKIDLLPSSLSPTR EHW+RQRARE GI+K++ LH VSA+
Sbjct: 237 HSAAWKQGKSGNVPRVVLVVTKIDLLPSSLSPTRLEHWIRQRAREGGINKVSSLHMVSAL 296
Query: 288 KNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHL 347
++WGLK+L+D++VDLAG RGNVWA+GAQNAGKSTL+N+I K GG ++HL
Sbjct: 297 RDWGLKNLVDNIVDLAGPRGNVWAVGAQNAGKSTLINSIGKYA----GGK------ITHL 346
Query: 348 TEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTY 407
TEAPVPGTTLGIVRVEGV +QAKLFDTPGLLHP QITTRL REEQKLV++ KELKPRTY
Sbjct: 347 TEAPVPGTTLGIVRVEGVFSSQAKLFDTPGLLHPYQITTRLMREEQKLVHVGKELKPRTY 406
Query: 408 RIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQP 467
RIKAGHSIHIAGL+R+D+EE+ ++SIYVTVWASPYLPLHMGK ENAC M + HFG QLQP
Sbjct: 407 RIKAGHSIHIAGLVRLDIEETPLDSIYVTVWASPYLPLHMGKIENACKMFQDHFGCQLQP 466
Query: 468 PIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDI 527
PIGEKRV+ELG WVR+EFHVSG+SW+SSSVDIA AGLGWF+ LKG+A LGVWTYEGVD
Sbjct: 467 PIGEKRVQELGNWVRREFHVSGNSWESSSVDIAVAGLGWFAFGLKGDAVLGVWTYEGVDA 526
Query: 528 VLRNALLPYRSQVFEVAGFTVSKIISKADQSLNKSKRLNEAKRK 571
VLRNAL+PYRS FE+AGFTVSKI+S++DQ+LNKSK+ N+ K K
Sbjct: 527 VLRNALIPYRSNTFEIAGFTVSKIVSQSDQALNKSKQRNDKKAK 570
>gi|225435640|ref|XP_002285660.1| PREDICTED: uncharacterized protein yqeH-like [Vitis vinifera]
Length = 584
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/588 (66%), Positives = 460/588 (78%), Gaps = 31/588 (5%)
Query: 6 RNISQSKLKPIFHESFLTKITSPYLQLHPTKALKAPTSSSSSSSFSSQP----TNTAPPP 61
R S SKLK + S T +S L L P +S+ S + + P +++ P
Sbjct: 4 RKFSASKLKHLLPLSVFTH-SSTNLSLSPF------SSNPISKTLNPNPHFLFSHSKLRP 56
Query: 62 LSSS-----LALTRDGNYDEA-TPKLTVCPGCGVLMQDTNPKHPGYFIRPSQ-NLNKVRK 114
SSS L TRDGN+DE + L +CPGCGV MQD++P PGYFI+PSQ + N +
Sbjct: 57 FSSSQSKPSLPFTRDGNFDETLSQSLFICPGCGVQMQDSDPVQPGYFIKPSQKDPNYRSR 116
Query: 115 SHLVHVANESEFSNSLKKGGLVVFEAENETSEVKKH--EKPVVCARCHALRHYGKVKDVT 172
VA E E S+SLKKG LV E N + EKPVVCARCH+LRHYGKVKD T
Sbjct: 117 IDRRPVAEEPEISDSLKKGLLVEDENPNPNPNPNPNLVEKPVVCARCHSLRHYGKVKDPT 176
Query: 173 VENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAW 232
VENLLP+FDFDHTVGR+L+S SG RSVVLMVVDA+DFDGSFP++VAKMVS T +EN AW
Sbjct: 177 VENLLPEFDFDHTVGRRLVSTSGTRSVVLMVVDASDFDGSFPKRVAKMVSTTIDENYTAW 236
Query: 233 KEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGL 292
K GKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE G +K+T +H VS+V++WGL
Sbjct: 237 KMGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREGGANKLTSVHLVSSVRDWGL 296
Query: 293 KSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPV 352
K+L+DD+V L G+RGNVWAIGAQNAGKSTL+N+I K GG ++HLTEAPV
Sbjct: 297 KNLVDDIVQLVGRRGNVWAIGAQNAGKSTLINSIGKHA----GGK------LTHLTEAPV 346
Query: 353 PGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAG 412
PGTTLGIVRVEGVL AKLFDTPGLL+P+QITTRLT EEQKLV+++KELKPRTYRIKAG
Sbjct: 347 PGTTLGIVRVEGVLTGAAKLFDTPGLLNPHQITTRLTGEEQKLVHVSKELKPRTYRIKAG 406
Query: 413 HSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEK 472
HS+HIAGL R+DVEE SV+++Y+TVWASPYLPLHMGKTENACTMVE HFGRQLQPPIGE+
Sbjct: 407 HSVHIAGLARLDVEELSVDTVYITVWASPYLPLHMGKTENACTMVEDHFGRQLQPPIGER 466
Query: 473 RVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNA 532
RV+ELGKW RKEF VSG+SWDSSSVD+A AGLGWF+V LKGEA LGVWTY+GVD++LRN+
Sbjct: 467 RVKELGKWERKEFRVSGTSWDSSSVDVAVAGLGWFAVGLKGEAVLGVWTYDGVDLILRNS 526
Query: 533 LLPYRSQVFEVAGFTVSKIISKADQSLNKSKRLNEAKRKPREPEGTIH 580
LLPYRSQ FEVAGFTVSKI+SKADQ+ NKS + ++ +RK +P+ H
Sbjct: 527 LLPYRSQNFEVAGFTVSKIVSKADQASNKSGQ-SQKRRKSSDPKAAAH 573
>gi|297746417|emb|CBI16473.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/598 (64%), Positives = 456/598 (76%), Gaps = 51/598 (8%)
Query: 3 SRARNISQSKLKPIFHESFLTKITSPYLQLHPTKALKAPTSSSSSSSFSSQP-TNTAPP- 60
S RN + K + I + +K+ L P +++ S S FSS P + T P
Sbjct: 33 STGRNTKKQKREMIVRKFSASKLK----HLLPLSVFTHSSTNLSLSPFSSNPISKTLNPN 88
Query: 61 -----------PLSSS-----LALTRDGNYDEA-TPKLTVCPGCGVLMQDTNPKHPGYFI 103
P SSS L TRDGN+DE + L +CPGCGV MQD++P PGYFI
Sbjct: 89 PHFLFSHSKLRPFSSSQSKPSLPFTRDGNFDETLSQSLFICPGCGVQMQDSDPVQPGYFI 148
Query: 104 RPSQ-NLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENETSEVKKHEKPVVCARCHAL 162
+PSQ + N + VA E E S+SLKKG L KPVVCARCH+L
Sbjct: 149 KPSQKDPNYRSRIDRRPVAEEPEISDSLKKGLL----------------KPVVCARCHSL 192
Query: 163 RHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVS 222
RHYGKVKD TVENLLP+FDFDHTVGR+L+S SG RSVVLMVVDA+DFDGSFP++VAKMVS
Sbjct: 193 RHYGKVKDPTVENLLPEFDFDHTVGRRLVSTSGTRSVVLMVVDASDFDGSFPKRVAKMVS 252
Query: 223 DTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLH 282
T +EN AWK GKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE G +K+T +H
Sbjct: 253 TTIDENYTAWKMGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREGGANKLTSVH 312
Query: 283 FVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKN 342
VS+V++WGLK+L+DD+V L G+RGNVWAIGAQNAGKSTL+N+I K GG
Sbjct: 313 LVSSVRDWGLKNLVDDIVQLVGRRGNVWAIGAQNAGKSTLINSIGKHA----GGK----- 363
Query: 343 IVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKEL 402
++HLTEAPVPGTTLGIVRVEGVL AKLFDTPGLL+P+QITTRLT EEQKLV+++KEL
Sbjct: 364 -LTHLTEAPVPGTTLGIVRVEGVLTGAAKLFDTPGLLNPHQITTRLTGEEQKLVHVSKEL 422
Query: 403 KPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFG 462
KPRTYRIKAGHS+HIAGL R+DVEE SV+++Y+TVWASPYLPLHMGKTENACTMVE HFG
Sbjct: 423 KPRTYRIKAGHSVHIAGLARLDVEELSVDTVYITVWASPYLPLHMGKTENACTMVEDHFG 482
Query: 463 RQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTY 522
RQLQPPIGE+RV+ELGKW RKEF VSG+SWDSSSVD+A AGLGWF+V LKGEA LGVWTY
Sbjct: 483 RQLQPPIGERRVKELGKWERKEFRVSGTSWDSSSVDVAVAGLGWFAVGLKGEAVLGVWTY 542
Query: 523 EGVDIVLRNALLPYRSQVFEVAGFTVSKIISKADQSLNKSKRLNEAKRKPREPEGTIH 580
+GVD++LRN+LLPYRSQ FEVAGFTVSKI+SKADQ+ NKS + ++ +RK +P+ H
Sbjct: 543 DGVDLILRNSLLPYRSQNFEVAGFTVSKIVSKADQASNKSGQ-SQKRRKSSDPKAAAH 599
>gi|224057138|ref|XP_002299138.1| predicted protein [Populus trichocarpa]
gi|222846396|gb|EEE83943.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/617 (64%), Positives = 476/617 (77%), Gaps = 37/617 (5%)
Query: 5 ARNI--SQSKLKPIFHESFL-------TKITSPYLQLHPTKALKAPTSSSSSSSFSSQPT 55
ARN+ S++KLKP+ SFL +K Y +P + PT ++ FSS+PT
Sbjct: 4 ARNLPASKTKLKPLLSLSFLVQSPLTPSKTHDSYCNFYP----QNPTKTNFLYFFSSKPT 59
Query: 56 NTAPPPLSS--SLALTRDGNYDEATPKLTVCPGCGVLMQDTNPKHPGYFIRPS-QNLNKV 112
N PP + SL LTRDGNYD+ATP TVCPGCGV MQ TNPKHPG++ PS ++ +
Sbjct: 60 NPNPPKHQTFPSLHLTRDGNYDDATPPATVCPGCGVHMQYTNPKHPGFYKEPSVKDPDYK 119
Query: 113 RKSHLVHVANESEFSNSLKKGGLVVFEAENETSEVKKHEK------PVVCARCHALRHYG 166
+HLV ++ ESEF SLK+G V +++N ++ ++E PVVCARCH+LRHYG
Sbjct: 120 SDAHLVPISLESEFPGSLKRGFFVEPDSQNPDLDLAENESVLGKRPPVVCARCHSLRHYG 179
Query: 167 KVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAE 226
KVKD TVENLLP+FDF HTVGR+L+S+SGAR+VVL+VVDA DFDGSFP+KVAK+VSD+ E
Sbjct: 180 KVKDPTVENLLPEFDFYHTVGRRLVSSSGARTVVLLVVDAVDFDGSFPKKVAKLVSDSIE 239
Query: 227 ENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSA 286
EN AWKEGKSGNV R+VLVVTKIDLLPSSLSP FE WVR+RARE G S I K+H VS+
Sbjct: 240 ENFTAWKEGKSGNVARIVLVVTKIDLLPSSLSPLGFEQWVRRRAREGGASVIKKVHLVSS 299
Query: 287 VKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSH 346
V+NWGLK+L +DV++LAG RG+VWA+GAQNAGKSTLLNA+AK V G E K VS+
Sbjct: 300 VRNWGLKNLAEDVIELAGARGHVWAVGAQNAGKSTLLNAMAKCV-----GGNERK--VSY 352
Query: 347 LTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRT 406
LTEAPVPGTTLGIVRVEGVLP QAKLFDTPGLL+P QITTRL REEQ+LV+I+KELKPRT
Sbjct: 353 LTEAPVPGTTLGIVRVEGVLPGQAKLFDTPGLLNPQQITTRLNREEQRLVHISKELKPRT 412
Query: 407 YRIKA--------GHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVE 458
YRIK GHS+HI GLMR+D+ E SV+S+YV+VWASPYLPLHMGKTEN TMVE
Sbjct: 413 YRIKVSFLELRPEGHSVHIGGLMRLDIVELSVDSLYVSVWASPYLPLHMGKTENVSTMVE 472
Query: 459 KHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALG 518
HFGRQLQPPIG+KRV++LGKWVR+EF VSG+ WDSSSVD+AAAGLGWF + LKGEA LG
Sbjct: 473 DHFGRQLQPPIGDKRVKDLGKWVRQEFRVSGNRWDSSSVDVAAAGLGWFGIGLKGEAILG 532
Query: 519 VWTYEGVDIVLRNALLPYRSQVFEVAGFTVSKIISKADQSLNKSKRLNEAKRKPREPEGT 578
VWTYEGV +VLR+AL+PYR+Q FEV GFTVSKI+SKADQ+LNKS +E KRK E
Sbjct: 533 VWTYEGVGVVLRDALIPYRAQSFEVTGFTVSKIVSKADQALNKSLSQSEKKRKQSNQEVA 592
Query: 579 IHPKSSLSTIDSVSSSC 595
+ +S I ++SC
Sbjct: 593 ASAELLVSAIHEDANSC 609
>gi|449448988|ref|XP_004142247.1| PREDICTED: uncharacterized protein YqeH-like [Cucumis sativus]
Length = 566
Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/577 (64%), Positives = 460/577 (79%), Gaps = 26/577 (4%)
Query: 5 ARNISQSKLKPIFHESFLTKITSPYLQLHPTKALKAPTSSSSSSSFSSQPTNTAPPPLSS 64
AR +S S LK F++ ++S + +P+ + P S+ S SFSS+PT+
Sbjct: 4 ARKLSASNLKSFLFLRFISHLSSSPICSNPS--ILFPLPSTLSRSFSSKPTS------PQ 55
Query: 65 SLALTRDGNYDEATPKLT-VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRK-SHLVHVAN 122
+ +L+RDGN+DE T + + VCPGCGV MQD+NPKHPG+FI+PS+ + R +HLV V +
Sbjct: 56 AFSLSRDGNFDETTSRFSLVCPGCGVHMQDSNPKHPGFFIKPSKKDSNYRLLTHLVPVDD 115
Query: 123 ESEFSNSLKKGGLVVFEAENETSEV---KKHEKPVVCARCHALRHYGKVKDVTVENLLPD 179
ESE S LK+G +V E E E +E +K +KP VC+RCH+LRHYGKVKD +VENLLPD
Sbjct: 116 ESECSEFLKRG--LVIEPEKEKTEEDVNEKPQKPTVCSRCHSLRHYGKVKDPSVENLLPD 173
Query: 180 FDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGN 239
FDF+HT+G +L+S +G RSVVL+VVDAADFDGSFP+KVA +VS + E N AWK+GKSGN
Sbjct: 174 FDFNHTLGGRLVSTTGTRSVVLIVVDAADFDGSFPKKVANLVSASIENNSAAWKQGKSGN 233
Query: 240 VPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDV 299
VPRVVLVVTK DLLPSSLSP +FEHWVRQRARE GI+KIT LH VS++++WG+K+L++DV
Sbjct: 234 VPRVVLVVTKTDLLPSSLSPEKFEHWVRQRAREGGINKITSLHMVSSIRDWGIKNLVEDV 293
Query: 300 VDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGI 359
++LAG RGNVWAIGAQNAGKSTL+N+I K V GG ++ LTEAPVPGTTLGI
Sbjct: 294 IELAGARGNVWAIGAQNAGKSTLINSIGKHV----GGK------ITQLTEAPVPGTTLGI 343
Query: 360 VRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAG 419
+RVEG+ PAQAKLFDTPGLL+P+QITTRLTREEQKLV+I+KELKPRTYRIK GH+IH+AG
Sbjct: 344 IRVEGIFPAQAKLFDTPGLLNPHQITTRLTREEQKLVHISKELKPRTYRIKVGHTIHVAG 403
Query: 420 LMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGK 479
LMR+DVEE+++++IYVTVWASPYLPLHMGKTENA M E HFG QLQPPIG+ RVEELGK
Sbjct: 404 LMRLDVEETNLDTIYVTVWASPYLPLHMGKTENATKMQEDHFGIQLQPPIGKDRVEELGK 463
Query: 480 WVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQ 539
WVR+EF V G+SWDSS VD A AGLGWF++ LKGE L +WTYEGVDIVLR++++P+R+
Sbjct: 464 WVRREFRVCGTSWDSSCVDAAVAGLGWFAIGLKGEVVLSIWTYEGVDIVLRSSVIPHRAN 523
Query: 540 VFEVAGFTVSKIISKADQSLNKSKRLNEAKRKPREPE 576
FE AGFTVSKI+SKADQ+ NK +E K+K +PE
Sbjct: 524 FFEDAGFTVSKIVSKADQASNKPLGQSEKKKK-SDPE 559
>gi|449503485|ref|XP_004162026.1| PREDICTED: uncharacterized protein YqeH-like [Cucumis sativus]
Length = 568
Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/572 (64%), Positives = 458/572 (80%), Gaps = 25/572 (4%)
Query: 5 ARNISQSKLKPIFHESFLTKITSPYLQLHPTKALKAPTSSSSSSSFSSQPTNTAPPPLSS 64
AR +S S LK F++ ++S + +P+ + P S+ S SFSS+PT+
Sbjct: 4 ARKLSASNLKSFLSLRFISHLSSSPICSNPS--ILFPLPSTLSRSFSSKPTS------PQ 55
Query: 65 SLALTRDGNYDEATPKLT-VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRK-SHLVHVAN 122
+L+L+RDGN+DE T + + VCPGCGV MQD+NPKHPG+FI+PS+ + R +HLV V +
Sbjct: 56 ALSLSRDGNFDETTSRFSLVCPGCGVHMQDSNPKHPGFFIKPSKKDSNYRLLTHLVPVDD 115
Query: 123 ESEFSNSLKKGGLVVFEAENETSEV---KKHEKPVVCARCHALRHYGKVKDVTVENLLPD 179
ESE S LK+G +V E E E +E +K +KP VC+RCH+LRHYGKVKD +VENLLPD
Sbjct: 116 ESECSEFLKRG--LVIEPEKEKTEEDVNEKPQKPTVCSRCHSLRHYGKVKDPSVENLLPD 173
Query: 180 FDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGN 239
FDF+HT+G +L+S +G RSVVL+VVDAADFDGSFP+KVA +VS + E N AWK+GKSGN
Sbjct: 174 FDFNHTLGGRLVSTTGTRSVVLIVVDAADFDGSFPKKVANLVSASIENNSAAWKQGKSGN 233
Query: 240 VPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDV 299
VPRVVLVVTK DLLPSSLSP +FEHWVRQRARE GI+KIT LH VS++++WG+K+L++DV
Sbjct: 234 VPRVVLVVTKTDLLPSSLSPEKFEHWVRQRAREGGINKITSLHMVSSIRDWGIKNLVEDV 293
Query: 300 VDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGI 359
++LAG RGNVWAIGAQNAGKSTL+N+I K V GG ++ LTEAPVPGTTLGI
Sbjct: 294 IELAGARGNVWAIGAQNAGKSTLINSIGKHV----GGK------ITQLTEAPVPGTTLGI 343
Query: 360 VRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAG 419
+RVEG+ PAQAKLFDTPGLL+P+QITTRLTREEQKLV+I+KELKPRTYRIK GH+IH+AG
Sbjct: 344 IRVEGIFPAQAKLFDTPGLLNPHQITTRLTREEQKLVHISKELKPRTYRIKVGHTIHVAG 403
Query: 420 LMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGK 479
LMR+DVEE+++++IYVTVWASPYLPLHMGKTENA M E HFG QLQPPIG+ RVEELGK
Sbjct: 404 LMRLDVEETNLDTIYVTVWASPYLPLHMGKTENATKMQEDHFGIQLQPPIGKDRVEELGK 463
Query: 480 WVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQ 539
WVR+EF V G+SWDSS VD A AGLGWF++ LKGE L +WTYEGVDIVLR++++P+R+
Sbjct: 464 WVRREFRVCGTSWDSSCVDAAVAGLGWFAIGLKGEVVLSIWTYEGVDIVLRSSVIPHRAN 523
Query: 540 VFEVAGFTVSKIISKADQSLNKSKRLNEAKRK 571
FE AGFTVSKI+SKADQ+ NK +E K++
Sbjct: 524 FFEDAGFTVSKIVSKADQASNKPLGQSEKKKR 555
>gi|297809289|ref|XP_002872528.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318365|gb|EFH48787.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 597
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/591 (63%), Positives = 462/591 (78%), Gaps = 40/591 (6%)
Query: 1 MLSRA-RNISQSKLKPIFHESFLTKITSPYLQLHPTKALKAPTSSSSSSSFSSQPTNTAP 59
MLS+A R +S SKLKP+F L+ SP PTK P S S + + T +
Sbjct: 1 MLSKAARELSSSKLKPLFALP-LSSFKSPI----PTK----PNPSPSFLNLHNSNTTSKS 51
Query: 60 PPL-------SSSLALTRDGNYDEATP-KLTVCPGCGVLMQDTNPKHPGYFIRPS--QNL 109
P L SS L L RDGNY++ T ++VCPGCGV MQ++NPKHPG+FI+PS +
Sbjct: 52 PFLRFYSSSSSSLLPLNRDGNYNDTTSITISVCPGCGVHMQNSNPKHPGFFIKPSTEKQR 111
Query: 110 NKVRKSHLVHVANESEFSNSLKKGGLVVFEAENETS-------EVKKHEKPVVCARCHAL 162
N + +LV ++ E EF +S+K+G + E N + E + +P+VCARCH+L
Sbjct: 112 NDLNLRNLVPISQEPEFIDSIKRG--FIIEPINSSDLNPKDHEETDQDSRPLVCARCHSL 169
Query: 163 RHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVS 222
RHYGKVKD TVENLLPDFDFDHTVGR+L SASGAR+VVLMVVDA+DFDGSFP++VAK+VS
Sbjct: 170 RHYGKVKDPTVENLLPDFDFDHTVGRRLGSASGARTVVLMVVDASDFDGSFPKRVAKLVS 229
Query: 223 DTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLH 282
T +EN AWKEGKSGNVPRVV+VVTKIDLLPSSLSPTRFEHWVR RARE G+SKITKLH
Sbjct: 230 RTIDENNMAWKEGKSGNVPRVVVVVTKIDLLPSSLSPTRFEHWVRLRAREGGLSKITKLH 289
Query: 283 FVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKN 342
FVS +KNWG+K L++DV +AGKRG+VWA+G+QNAGKSTL+NA+ K V GG
Sbjct: 290 FVSPIKNWGIKDLVEDVAAMAGKRGHVWAVGSQNAGKSTLINAVGKVV----GGK----- 340
Query: 343 IVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKEL 402
V HLTEAPVPGTTLGI+R+EGVLP +AKLFDTPGLL+P+QITTRLTREEQ+LV+I+KEL
Sbjct: 341 -VWHLTEAPVPGTTLGIIRIEGVLPFEAKLFDTPGLLNPHQITTRLTREEQRLVHISKEL 399
Query: 403 KPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFG 462
KPRTYRIK G+++HI GLMR+D++ESSV+S+YVTVWASPY+PLHMGK ENA +E HFG
Sbjct: 400 KPRTYRIKEGYTVHIGGLMRLDIDESSVDSLYVTVWASPYVPLHMGKKENAYKTLEDHFG 459
Query: 463 RQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTY 522
+LQPPIGEKRVEELGKWVRKEF VSGSSWD+SSVDIA +GLGWF++ LKGEA LGVWT+
Sbjct: 460 CRLQPPIGEKRVEELGKWVRKEFRVSGSSWDTSSVDIAVSGLGWFAIGLKGEAILGVWTH 519
Query: 523 EGVDIVLRNALLPYRSQVFEVAGFTVSKIISKADQSLNKSKRL-NEAKRKP 572
EG+D+ R++LLP R+ FE +GFTVSKI++KAD++ N+ ++ + KRKP
Sbjct: 520 EGIDVFCRDSLLPQRANTFEDSGFTVSKIVAKADRNFNQIHKVETQKKRKP 570
>gi|357473899|ref|XP_003607234.1| hypothetical protein MTR_4g074870 [Medicago truncatula]
gi|355508289|gb|AES89431.1| hypothetical protein MTR_4g074870 [Medicago truncatula]
Length = 575
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/583 (64%), Positives = 441/583 (75%), Gaps = 49/583 (8%)
Query: 5 ARNISQSKLKPIFHESFLTKI-----TSPYLQLHP---------TKALKAPTSSSSSSSF 50
AR S SKLK + + + L+ ++ + L P TK L P SS+ F
Sbjct: 4 ARKFSPSKLKSLVYLALLSDCKTHVQSNLFTTLTPDSNPHLHSLTKNLPHP-SSNLIRYF 62
Query: 51 SSQPTNTAPPPLSSSLALTRDGNYDEATPK-LTVCPGCGVLMQDTNPKHPGYFIRPSQNL 109
SS P P L+R+GNYDE T + L VCPGCG L + + + +
Sbjct: 63 SSAPKQKLP--------LSREGNYDEGTSQSLHVCPGCGFLCKIPDVTYKLH-------- 106
Query: 110 NKVRKSHLVHVANESEFSNSLKKGGLVVFE--AENETSEVKKHEKPVVCARCHALRHYGK 167
+HL VA ESEFS ++KKG +V E ++ S ++K EKPVVCARCH+LRHYGK
Sbjct: 107 -----THLEPVAQESEFSKTVKKGFVVEPEKLCSSDDSLIRKPEKPVVCARCHSLRHYGK 161
Query: 168 VKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEE 227
VKD TVENLLPDFDFDHTVGRKL SAS RSVVLMVVDA DFDGSFPRKV+ +VS T E+
Sbjct: 162 VKDPTVENLLPDFDFDHTVGRKLASASRTRSVVLMVVDAVDFDGSFPRKVSNLVSKTIED 221
Query: 228 NERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAV 287
N AWK+GKSGNVPRVVLVVTKIDLLPSSLSPTR EHW+RQRARE GI KIT LH VS++
Sbjct: 222 NYTAWKQGKSGNVPRVVLVVTKIDLLPSSLSPTRLEHWIRQRAREGGIIKITSLHMVSSL 281
Query: 288 KNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHL 347
++WGLK+L++D+V+LAG RGNVW +GAQNAGKSTL+N+I K V GG +SHL
Sbjct: 282 RDWGLKNLVEDIVELAGSRGNVWTVGAQNAGKSTLINSIGKHV----GGK------ISHL 331
Query: 348 TEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTY 407
TEAPVPGTTLGIVRVEG LP+QAKLFDTPGLLHP QITTRL REEQKLV + KELKPRTY
Sbjct: 332 TEAPVPGTTLGIVRVEGALPSQAKLFDTPGLLHPYQITTRLMREEQKLVYMTKELKPRTY 391
Query: 408 RIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQP 467
RIKAGHSIHIAGLMR+DVEE+S+++IYVTVWASPYLPLHMGK ENA M + +FG QLQP
Sbjct: 392 RIKAGHSIHIAGLMRLDVEETSLDTIYVTVWASPYLPLHMGKIENASKMFKDYFGHQLQP 451
Query: 468 PIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDI 527
PIGE+RV+ELG WVR+EFHV G+SWDSSSVDIAAAGLGWF++ LKGEA L WTYEGVD+
Sbjct: 452 PIGEERVKELGNWVRREFHVCGNSWDSSSVDIAAAGLGWFAIGLKGEAVLSAWTYEGVDV 511
Query: 528 VLRNALLPYRSQVFEVAGFTVSKIISKADQSLNKSKRLNEAKR 570
V RN+L+PYRS FEVAGFTVSKI+S++D++ NK + +AKR
Sbjct: 512 VQRNSLIPYRSNTFEVAGFTVSKIVSQSDRASNKPRSDKKAKR 554
>gi|18413362|ref|NP_567364.1| GTPase YqeH-like protein [Arabidopsis thaliana]
gi|4115915|gb|AAD03426.1| contains similarity to Helix pomatia br-1 protein (GB: X96994)
[Arabidopsis thaliana]
gi|15293099|gb|AAK93660.1| unknown protein [Arabidopsis thaliana]
gi|21281233|gb|AAM45035.1| unknown protein [Arabidopsis thaliana]
gi|332657510|gb|AEE82910.1| GTPase YqeH-like protein [Arabidopsis thaliana]
Length = 597
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/592 (62%), Positives = 459/592 (77%), Gaps = 42/592 (7%)
Query: 1 MLSRA-RNISQSKLKPIFH---ESFLTKITSPYLQLHPTKALKAPTSSSSSSSFSSQPTN 56
MLS+A R +S SKLKP+F SF + I PTK +P S + F+ N
Sbjct: 1 MLSKAARELSSSKLKPLFALHLSSFKSSI--------PTKPNPSPPSYLNPHHFN----N 48
Query: 57 TAPPPL---------SSSLALTRDGNYDEATP-KLTVCPGCGVLMQDTNPKHPGYFIRPS 106
+ PP S+ L L RDGNY++ T ++VCPGCGV MQ++NPKHPG+FI+PS
Sbjct: 49 ISKPPFLRFYSSSSSSNLLPLNRDGNYNDTTSITISVCPGCGVHMQNSNPKHPGFFIKPS 108
Query: 107 --QNLNKVRKSHLVHVANESEFSNSLKKGGLV--VFEAE-NETSEVKKHEKPVVCARCHA 161
+ N + L ++ E EF +S+K+G ++ + ++ N + +P+VCARCH+
Sbjct: 109 TEKQRNDLNLRDLTPISQEPEFIDSIKRGFIIEPISSSDLNPRDDEPSDSRPLVCARCHS 168
Query: 162 LRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMV 221
LRHYG+VKD TVENLLPDFDFDHTVGR+L SASGAR+VVLMVVDA+DFDGSFP++VAK+V
Sbjct: 169 LRHYGRVKDPTVENLLPDFDFDHTVGRRLGSASGARTVVLMVVDASDFDGSFPKRVAKLV 228
Query: 222 SDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKL 281
S T +EN AWKEGKSGNVPRVV+VVTKIDLLPSSLSP RFE WVR RARE G+SKITKL
Sbjct: 229 SRTIDENNMAWKEGKSGNVPRVVVVVTKIDLLPSSLSPNRFEQWVRLRAREGGLSKITKL 288
Query: 282 HFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEK 341
HFVS VKNWG+K L++DV +AGKRG+VWA+G+QNAGKSTL+NA+ K V GG
Sbjct: 289 HFVSPVKNWGIKDLVEDVAAMAGKRGHVWAVGSQNAGKSTLINAVGKVV----GGK---- 340
Query: 342 NIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKE 401
V HLTEAPVPGTTLGI+R+EGVLP +AKLFDTPGLL+P+QITTRLTREEQ+LV+I+KE
Sbjct: 341 --VWHLTEAPVPGTTLGIIRIEGVLPFEAKLFDTPGLLNPHQITTRLTREEQRLVHISKE 398
Query: 402 LKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHF 461
LKPRTYRIK G+++HI GLMR+D++E+SV+S+YVTVWASPY+PLHMGK ENA +E HF
Sbjct: 399 LKPRTYRIKEGYTVHIGGLMRLDIDEASVDSLYVTVWASPYVPLHMGKKENAYKTLEDHF 458
Query: 462 GRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWT 521
G +LQPPIGEKRVEELGKWVRKEF VSG+SWD+SSVDIA +GLGWF++ LKG+A LGVWT
Sbjct: 459 GCRLQPPIGEKRVEELGKWVRKEFRVSGTSWDTSSVDIAVSGLGWFALGLKGDAILGVWT 518
Query: 522 YEGVDIVLRNALLPYRSQVFEVAGFTVSKIISKADQSLNK-SKRLNEAKRKP 572
+EG+D+ R++LLP R+ FE +GFTVSKI++KAD++ N+ K + KRKP
Sbjct: 519 HEGIDVFCRDSLLPQRAHTFEDSGFTVSKIVAKADRNFNQIHKEETQKKRKP 570
>gi|4539440|emb|CAB40028.1| putative protein [Arabidopsis thaliana]
gi|7267759|emb|CAB78185.1| putative protein [Arabidopsis thaliana]
Length = 605
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/600 (61%), Positives = 459/600 (76%), Gaps = 50/600 (8%)
Query: 1 MLSRA-RNISQSKLKPIFH---ESFLTKITSPYLQLHPTKALKAPTSSSSSSSFSSQPTN 56
MLS+A R +S SKLKP+F SF + I PTK +P S + F+ N
Sbjct: 1 MLSKAARELSSSKLKPLFALHLSSFKSSI--------PTKPNPSPPSYLNPHHFN----N 48
Query: 57 TAPPPL---------SSSLALTRDGNYDEATP-KLTVCPGCGVLMQDTNPKHPGYFIRPS 106
+ PP S+ L L RDGNY++ T ++VCPGCGV MQ++NPKHPG+FI+PS
Sbjct: 49 ISKPPFLRFYSSSSSSNLLPLNRDGNYNDTTSITISVCPGCGVHMQNSNPKHPGFFIKPS 108
Query: 107 --QNLNKVRKSHLVHVANESEFSNSLKKGGLV--VFEAE-NETSEVKKHEKPVVCARCHA 161
+ N + L ++ E EF +S+K+G ++ + ++ N + +P+VCARCH+
Sbjct: 109 TEKQRNDLNLRDLTPISQEPEFIDSIKRGFIIEPISSSDLNPRDDEPSDSRPLVCARCHS 168
Query: 162 LRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMV 221
LRHYG+VKD TVENLLPDFDFDHTVGR+L SASGAR+VVLMVVDA+DFDGSFP++VAK+V
Sbjct: 169 LRHYGRVKDPTVENLLPDFDFDHTVGRRLGSASGARTVVLMVVDASDFDGSFPKRVAKLV 228
Query: 222 SDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKL 281
S T +EN AWKEGKSGNVPRVV+VVTKIDLLPSSLSP RFE WVR RARE G+SKITKL
Sbjct: 229 SRTIDENNMAWKEGKSGNVPRVVVVVTKIDLLPSSLSPNRFEQWVRLRAREGGLSKITKL 288
Query: 282 HFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEK 341
HFVS VKNWG+K L++DV +AGKRG+VWA+G+QNAGKSTL+NA+ K V GG
Sbjct: 289 HFVSPVKNWGIKDLVEDVAAMAGKRGHVWAVGSQNAGKSTLINAVGKVV----GGK---- 340
Query: 342 NIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKE 401
V HLTEAPVPGTTLGI+R+EGVLP +AKLFDTPGLL+P+QITTRLTREEQ+LV+I+KE
Sbjct: 341 --VWHLTEAPVPGTTLGIIRIEGVLPFEAKLFDTPGLLNPHQITTRLTREEQRLVHISKE 398
Query: 402 LKPRTYRIKA--------GHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
LKPRTYRIK G+++HI GLMR+D++E+SV+S+YVTVWASPY+PLHMGK ENA
Sbjct: 399 LKPRTYRIKVWFNIIECEGYTVHIGGLMRLDIDEASVDSLYVTVWASPYVPLHMGKKENA 458
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+E HFG +LQPPIGEKRVEELGKWVRKEF VSG+SWD+SSVDIA +GLGWF++ LKG
Sbjct: 459 YKTLEDHFGCRLQPPIGEKRVEELGKWVRKEFRVSGTSWDTSSVDIAVSGLGWFALGLKG 518
Query: 514 EAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFTVSKIISKADQSLNK-SKRLNEAKRKP 572
+A LGVWT+EG+D+ R++LLP R+ FE +GFTVSKI++KAD++ N+ K + KRKP
Sbjct: 519 DAILGVWTHEGIDVFCRDSLLPQRAHTFEDSGFTVSKIVAKADRNFNQIHKEETQKKRKP 578
>gi|255581678|ref|XP_002531642.1| conserved hypothetical protein [Ricinus communis]
gi|223528727|gb|EEF30738.1| conserved hypothetical protein [Ricinus communis]
Length = 745
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/542 (65%), Positives = 435/542 (80%), Gaps = 28/542 (5%)
Query: 42 TSSSSSSSFSSQPTNT---APPPLSSSLALTRDGNYDEATPKLTVCPGCGVLMQDTNPKH 98
T+S + S F + P N+ P LTRDGNYD+ATP VCPGCG+ +QD++PK
Sbjct: 200 TASKTLSPFPTTPINSKQPPPSLSPPLFLLTRDGNYDDATPPAAVCPGCGIHIQDSDPKQ 259
Query: 99 PGYFIRPS-QNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENETSEVKKH------- 150
PG+F +PS ++ N +S LV ++ ESEFSNSLK G +V+ + E ET + K++
Sbjct: 260 PGFFTKPSIKDPNYKSRSSLVPISLESEFSNSLKTG-VVIDDDEAETHDSKQNPVTTTAA 318
Query: 151 EKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFD 210
EKP+VCARCH+LRHYGKVKD TVENLLP+FDFD TVG++L+SASGARSVVL+VVDA DFD
Sbjct: 319 EKPIVCARCHSLRHYGKVKDPTVENLLPEFDFDSTVGKRLVSASGARSVVLLVVDAVDFD 378
Query: 211 GSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRA 270
GSFP+KVAK+VS EEN +WKEGKSGNVPR+VLVVTKIDLLP++LSPTRFEHWVRQRA
Sbjct: 379 GSFPKKVAKLVSSAIEENFNSWKEGKSGNVPRIVLVVTKIDLLPTTLSPTRFEHWVRQRA 438
Query: 271 REDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSV 330
RE G S I K+HFVSAV++WGLK L+DDV+ +AG RGNVWA+G QNAGKSTL+NA+ K
Sbjct: 439 REGGASVIKKVHFVSAVRDWGLKDLVDDVIKMAGARGNVWAVGMQNAGKSTLINAMGKWT 498
Query: 331 DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTR 390
G GE K ++HLTEAPVPGTTLGIVRVEGVLP QAKLFDTPGLL+P+QITTRLTR
Sbjct: 499 -----GGGERK--LTHLTEAPVPGTTLGIVRVEGVLPGQAKLFDTPGLLNPHQITTRLTR 551
Query: 391 EEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTV-WASPYLPLHMGK 449
+EQKLV+I+KELK RTYRIK + + ++ DV ++ ++ V ++ PYLPLHMGK
Sbjct: 552 DEQKLVHISKELKARTYRIKI---VCVTFQLQHDVADN-----FLGVNFSXPYLPLHMGK 603
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
TENA TM+ HFG QLQPPIGEKRVEELG+WVR+EF +SGS+WDSSSVDI+AAGLGW+++
Sbjct: 604 TENASTMLADHFGHQLQPPIGEKRVEELGRWVRREFSISGSNWDSSSVDISAAGLGWYAI 663
Query: 510 RLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFTVSKIISKADQSLNKSKRLNEAK 569
LKGEA +GVWTYEGVD+VLRN L+P+RSQ FEVAGFTVSKI+SKAD++LNKS+ +E
Sbjct: 664 GLKGEAVVGVWTYEGVDVVLRNPLIPFRSQTFEVAGFTVSKIVSKADKALNKSQHKSENN 723
Query: 570 RK 571
RK
Sbjct: 724 RK 725
>gi|50725922|dbj|BAD33450.1| GTP-binding protein-like [Oryza sativa Japonica Group]
gi|50726207|dbj|BAD33726.1| GTP-binding protein-like [Oryza sativa Japonica Group]
gi|215769235|dbj|BAH01464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218202025|gb|EEC84452.1| hypothetical protein OsI_31074 [Oryza sativa Indica Group]
Length = 604
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 279/499 (55%), Positives = 348/499 (69%), Gaps = 32/499 (6%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGL------- 135
+CPGCG+ MQ ++P PG+F PS R A+++ S SLK G L
Sbjct: 84 LCPGCGIAMQSSDPSLPGFFSLPSPKSPDYRARLAPVTADDTRISASLKSGHLREGEAAA 143
Query: 136 ----------VVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHT 185
V E E E KK K VVCARCH+LRHYG VK E LLPDFDF
Sbjct: 144 AASSSSAAVGVGVEVEKEG---KKENKVVVCARCHSLRHYGVVKRPEAEPLLPDFDFVAA 200
Query: 186 VGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVL 245
VG +L S SGARS+VL++ DA+DFDGSFPR VA++V+ E + WK G N+PR +L
Sbjct: 201 VGPRLASPSGARSLVLLLADASDFDGSFPRAVARLVAAAGEAHGSDWKHGAPANLPRALL 260
Query: 246 VVTKIDLLPS-SLSPTRFEHWVRQRARED--GISKITKLHFVSAVKNWGLKSLIDDVVDL 302
VVTK+DLLP+ SLSP W RAR G ++ +H VSA + WG++ L+D V L
Sbjct: 261 VVTKLDLLPTPSLSPDDVHAWAHSRARAGAGGDLRLAGVHLVSAARGWGVRDLLDHVRQL 320
Query: 303 AGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRV 362
AG RGNVWA+GA+N GKSTLLNAIA+ G LTEAPVPGTTL +++V
Sbjct: 321 AGSRGNVWAVGARNVGKSTLLNAIARCSGIEGG---------PTLTEAPVPGTTLDVIQV 371
Query: 363 EGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMR 422
+GVL +QAKLFDTPGLLH +Q+T+RLTREEQKLV ++KE++PRTYR+K G S+HI GL+R
Sbjct: 372 DGVLGSQAKLFDTPGLLHGHQLTSRLTREEQKLVRVSKEMRPRTYRLKPGQSVHIGGLVR 431
Query: 423 MDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVR 482
+D+EE +V S+YVTVWASP +PLHMGKTENA MV+ HFG QLQPPIG++RV ELGKWVR
Sbjct: 432 LDIEELTVGSVYVTVWASPLVPLHMGKTENAAAMVKDHFGLQLQPPIGQQRVNELGKWVR 491
Query: 483 KEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFE 542
K+F VSG+SWD +S DIA AGLGWF + LKGEA LG+WTY+GVD+V RN+L+ R+ +FE
Sbjct: 492 KQFKVSGNSWDVNSKDIAIAGLGWFGIGLKGEAVLGLWTYDGVDVVSRNSLVHERATIFE 551
Query: 543 VAGFTVSKIISKADQSLNK 561
AGFTVSKI+S+AD N+
Sbjct: 552 EAGFTVSKIVSQADSMANR 570
>gi|357153475|ref|XP_003576463.1| PREDICTED: uncharacterized protein yqeH-like [Brachypodium
distachyon]
Length = 584
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 278/498 (55%), Positives = 357/498 (71%), Gaps = 19/498 (3%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVF----- 138
CPGCG+ MQ +P PG+F PS R A++++ S SLK G L
Sbjct: 76 CPGCGIAMQSADPALPGFFNLPSPKSPDYRARLAPVTADDTQISTSLKSGHLREGQENSR 135
Query: 139 --EAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGA 196
EA E K+ K +VCARCH+LRHYG VK E LLPDFDF VG +L S SGA
Sbjct: 136 GDEAAGVEVEAKRESKVLVCARCHSLRHYGHVKRPDAEVLLPDFDFVAAVGPRLASPSGA 195
Query: 197 RSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS- 255
RS+VL++ DA+DFDGSFPR VA++V+ E ++ WK G N+PR VLVVTK+DLLP+
Sbjct: 196 RSLVLLLADASDFDGSFPRAVARLVAAAGEAHQEDWKRGAPANLPRAVLVVTKLDLLPTP 255
Query: 256 SLSPTRFEHWVRQRAREDGIS--KITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIG 313
SLSP W + RAR + ++ +H VSA + WG++ L++ V +LAG RG VWA+G
Sbjct: 256 SLSPDDVHAWAQARARAGAGADLQLAGVHLVSAARGWGVRDLLNHVRELAGARGKVWAVG 315
Query: 314 AQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLF 373
A+N GKSTLLNAIA+ G E + LTEAPVPGTTLG++RV+G+L AQAKLF
Sbjct: 316 ARNVGKSTLLNAIARC-------SGAEGGKI--LTEAPVPGTTLGVIRVDGILGAQAKLF 366
Query: 374 DTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESI 433
DTPGLLH +Q+T+RLT EEQK+V + KE++PRTYRIKAG SIHI GL+R+D+EE +V SI
Sbjct: 367 DTPGLLHGHQLTSRLTLEEQKIVQVRKEMQPRTYRIKAGQSIHIGGLVRLDIEELTVGSI 426
Query: 434 YVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWD 493
YVTVWASP +PLHMGKTENA +M++ HFG QLQPPIG+KRV ELGKWVRK+F VSG+SWD
Sbjct: 427 YVTVWASPLVPLHMGKTENAASMMKDHFGLQLQPPIGQKRVSELGKWVRKQFKVSGNSWD 486
Query: 494 SSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFTVSKIIS 553
S+S+DIA +GLGW+ + LKGE+ LG+WTY+GVD+V R++L+ R+ +FE GF+VSKI+S
Sbjct: 487 SNSMDIAISGLGWYGIGLKGESVLGLWTYDGVDVVPRSSLVHERASIFEEPGFSVSKIVS 546
Query: 554 KADQSLNKSKRLNEAKRK 571
+AD NK K +A +K
Sbjct: 547 QADSMTNKVKSSKKANKK 564
>gi|242044516|ref|XP_002460129.1| hypothetical protein SORBIDRAFT_02g023120 [Sorghum bicolor]
gi|241923506|gb|EER96650.1| hypothetical protein SORBIDRAFT_02g023120 [Sorghum bicolor]
Length = 597
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 273/493 (55%), Positives = 350/493 (70%), Gaps = 24/493 (4%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGL------- 135
VCPGCG+ MQ ++P PG+F+ PS R +++ S SLK G L
Sbjct: 81 VCPGCGISMQSSDPALPGFFLLPSAKSPDYRARLAPVTTDDTRISASLKSGHLREDLEPS 140
Query: 136 ---VVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMS 192
A E ++ K K +VCARCH+LRHYG+VK E LLPDFDF VG +L S
Sbjct: 141 GSDKPAAAAAEMADSKGEGKVLVCARCHSLRHYGRVKHPDAERLLPDFDFVAAVGPRLAS 200
Query: 193 ASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDL 252
SGARS+VL++ DA+DFDGSFPR VA++V+ E + WK G N+PR +LVVTK+DL
Sbjct: 201 PSGARSLVLLLADASDFDGSFPRAVARLVAAAGEAHSADWKHGAPANLPRALLVVTKLDL 260
Query: 253 LPS-SLSPTRFEHWVRQRAREDGIS--KITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNV 309
LP+ SLSP W RAR S ++ +H VSA + WG++ L++ V +LAG RGNV
Sbjct: 261 LPTPSLSPDDVHAWAHSRARAGAGSDLRLAGVHLVSAARGWGVRDLLEHVRELAGTRGNV 320
Query: 310 WAIGAQNAGKSTLLNAIAK-SVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPA 368
WA+GA+N GKSTLLNAIA+ S AGR LTEAPVPGTTL +++++GVL A
Sbjct: 321 WAVGARNVGKSTLLNAIARCSGIAGR----------PTLTEAPVPGTTLDVIKLDGVLGA 370
Query: 369 QAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEES 428
QAKLFDTPGLLH +Q+T+RLT EE KLV + KE+ PRTYRIK G SIHI GL+R+DVEE
Sbjct: 371 QAKLFDTPGLLHGHQLTSRLTSEEMKLVQVRKEMSPRTYRIKTGQSIHIGGLVRLDVEEL 430
Query: 429 SVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVS 488
+V SIYVTVWA+P +PLHMGKTENA ++++HFG QLQPPIG+++V+ELGKWVRK+F VS
Sbjct: 431 TVGSIYVTVWAAPLVPLHMGKTENAAALMKEHFGLQLQPPIGQEQVKELGKWVRKQFKVS 490
Query: 489 GSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFTV 548
G+SWD +S DIA AG+GWF + LKGEA LG+WTY+GVD++ R++L+ R+ +FE AGFTV
Sbjct: 491 GNSWDMNSKDIAIAGIGWFGIGLKGEAVLGLWTYDGVDVISRSSLVHERASIFEEAGFTV 550
Query: 549 SKIISKADQSLNK 561
S+I+SKAD NK
Sbjct: 551 SQIVSKADSMTNK 563
>gi|293335703|ref|NP_001168377.1| uncharacterized protein LOC100382146 [Zea mays]
gi|223947863|gb|ACN28015.1| unknown [Zea mays]
gi|414885176|tpg|DAA61190.1| TPA: hypothetical protein ZEAMMB73_567116 [Zea mays]
Length = 585
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 275/492 (55%), Positives = 350/492 (71%), Gaps = 24/492 (4%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKG--------- 133
VCPGCG+ MQ ++P+ PG+F+ PS R A+++ S SLK G
Sbjct: 81 VCPGCGIAMQSSDPELPGFFLLPSAKSPNYRARLAPVTADDTRISASLKSGHLREDIQPS 140
Query: 134 -GLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMS 192
G A E +E K K +VCARCH+LRHYG+VK E LLPDFDF VG +L S
Sbjct: 141 GGDKPAAAAAEMAEAKGEGKVLVCARCHSLRHYGRVKHPDAERLLPDFDFVAAVGPRLAS 200
Query: 193 ASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDL 252
SGARS+VL++ DA+DFDGSFPR VA++V+ E + WK G N+PR +LVVTK+DL
Sbjct: 201 PSGARSLVLLLADASDFDGSFPRAVARLVAAAGEAHRADWKHGAPANLPRALLVVTKLDL 260
Query: 253 LPS-SLSPTRFEHWVRQRAREDGIS--KITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNV 309
LP+ SLSP W RAR + ++ +H VSA + WG++ L++ V +LAG RGNV
Sbjct: 261 LPTPSLSPDDVHAWAHSRARAGAGADLRLAGVHLVSATRGWGVRDLLEHVRELAGTRGNV 320
Query: 310 WAIGAQNAGKSTLLNAIAKSVD-AGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPA 368
WA+GA+N GKSTLLNAIA+ GR LTEAPVPGTTL +++++GVL A
Sbjct: 321 WAVGARNVGKSTLLNAIARCCGIVGR----------PTLTEAPVPGTTLDVIKLDGVLGA 370
Query: 369 QAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEES 428
QAKLFDTPGLLH +Q+T+RLT EE KLV + KE+ PRTYRIK HSIHI GL+R+DVEE
Sbjct: 371 QAKLFDTPGLLHGHQLTSRLTSEEMKLVQVRKEMSPRTYRIKTEHSIHIGGLVRLDVEEL 430
Query: 429 SVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVS 488
+V SIYVTVWASP +PLHMGKTEN T++++HFG QLQPPIG++RV+ELGKWVRK+F VS
Sbjct: 431 TVGSIYVTVWASPLVPLHMGKTENTTTLIKEHFGLQLQPPIGQERVKELGKWVRKQFKVS 490
Query: 489 GSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFTV 548
G+SWD++S DIA AGLGWF + LKGEA LG+WTY+GVD++ R++L+ R+ VFE AGFTV
Sbjct: 491 GNSWDTNSKDIAIAGLGWFGIGLKGEAVLGLWTYDGVDVISRSSLVHERASVFEEAGFTV 550
Query: 549 SKIISKADQSLN 560
S+I+SKAD N
Sbjct: 551 SQIVSKADSMTN 562
>gi|125605432|gb|EAZ44468.1| hypothetical protein OsJ_29085 [Oryza sativa Japonica Group]
Length = 596
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 265/461 (57%), Positives = 329/461 (71%), Gaps = 32/461 (6%)
Query: 121 ANESEFSNSLKKGGL-----------------VVFEAENETSEVKKHEKPVVCARCHALR 163
A+++ S SLK G L V E E E KK K VVCARCH+LR
Sbjct: 114 ADDTRISASLKSGHLREGEAAAAASSSSAAVGVGVEVEKEG---KKENKVVVCARCHSLR 170
Query: 164 HYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSD 223
HYG VK E LLPDFDF VG +L S SGARS+VL++ DA+DFDGSFPR VA++V+
Sbjct: 171 HYGVVKRPEAEPLLPDFDFVAAVGPRLASPSGARSLVLLLADASDFDGSFPRAVARLVAA 230
Query: 224 TAEENERAWKEGKSGNVPRVVLVVTKIDLLPS-SLSPTRFEHWVRQRARED--GISKITK 280
E + WK G N+PR +LVVTK+DLLP+ SLSP W RAR G ++
Sbjct: 231 AGEAHGSDWKHGAPANLPRALLVVTKLDLLPTPSLSPDDVHAWAHSRARAGAGGDLRLAG 290
Query: 281 LHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEE 340
+H VSA + WG++ L+D V LAG RGNVWA+GA+N GKSTLLNAIA+ G
Sbjct: 291 VHLVSAARGWGVRDLLDHVRQLAGSRGNVWAVGARNVGKSTLLNAIARCSGIEGG----- 345
Query: 341 KNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINK 400
LTEAPVPGTTL +++V+GVL +QAKLFDTPGLLH +Q+T+RLTREEQKLV ++K
Sbjct: 346 ----PTLTEAPVPGTTLDVIQVDGVLGSQAKLFDTPGLLHGHQLTSRLTREEQKLVRVSK 401
Query: 401 ELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKH 460
E++PRTYR+K G S+HI GL+R+D+EE +V S+YVTVWASP +PLHMGKTENA MV+ H
Sbjct: 402 EMRPRTYRLKPGQSVHIGGLVRLDIEELTVGSVYVTVWASPLVPLHMGKTENAAAMVKDH 461
Query: 461 FGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVW 520
FG QLQPPIG++RV ELGKWVRK+F VSG+SWD +S DIA AGLGWF + LKGEA LG+W
Sbjct: 462 FGLQLQPPIGQQRVNELGKWVRKQFKVSGNSWDVNSKDIAIAGLGWFGIGLKGEAVLGLW 521
Query: 521 TYEGVDIVLRNALLPYRSQVFEVAGFTVSKIISKADQSLNK 561
TY+GVD+V RN+L+ R+ +FE AGFTVSKI+S+AD N+
Sbjct: 522 TYDGVDVVSRNSLVHERATIFEEAGFTVSKIVSQADSMANR 562
>gi|168011635|ref|XP_001758508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690118|gb|EDQ76486.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 456
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 250/475 (52%), Positives = 336/475 (70%), Gaps = 20/475 (4%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKG-GLVVFEAEN 142
CPGCGV MQDT+PK PGYF P+ N K ++ EF ++ G E +
Sbjct: 1 CPGCGVYMQDTDPKRPGYFKMPA-NFGK----------SDDEFEENVVGGMEEDESEEFS 49
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
+ + ++ EK VVCARCHALR+YGKVKD +VENLLPDFDF+ VG +L A G R+VVLM
Sbjct: 50 DDDDEEEEEKVVVCARCHALRNYGKVKDESVENLLPDFDFERVVGARLKKAYGRRAVVLM 109
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD +DFDGSFPRK A+++++ EE AW+EGKSGN PR+++V+ KIDLLP +S R
Sbjct: 110 VVDGSDFDGSFPRKAAEVLAEADEELGTAWQEGKSGNTPRLLVVMNKIDLLPKQISANRL 169
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
E WVR+R++ G+++I +H VSA K WG++ L D + LAG RG+ W +GAQNAGKS+L
Sbjct: 170 EQWVRRRSKAGGVTRIAGVHTVSAFKGWGIEQLADHIKQLAGPRGDCWVVGAQNAGKSSL 229
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N++AK AG EK V+ LTEA VPGTTLG++++EG+LPA+A+LFDTPGL+HP+
Sbjct: 230 INSLAKF--AG------EKRRVTALTEAAVPGTTLGVLKLEGILPARARLFDTPGLIHPH 281
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q++T+L REE KLV + KELKPRT+R+K G ++H+AGL+R+DV E+ ESIYVTVWAS
Sbjct: 282 QLSTKLNREELKLVEVRKELKPRTFRVKVGSTVHVAGLLRLDVMEAPSESIYVTVWASAL 341
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L HMGKTE A + EKH G +L PP+ ++R E+G+WV + V+G SW+ SSVD+A A
Sbjct: 342 LSCHMGKTEKAEELFEKHLGDRLAPPVDKERAAEIGRWVARRVTVTGDSWEHSSVDVAVA 401
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFTVSKIISKADQ 557
GLGW + +KG A L WTYEGV + A++ + +FE GFT K +K D+
Sbjct: 402 GLGWVGIGVKGIAVLQAWTYEGVQVTTHEAMVFDMAAIFEKPGFTAMKSPNKGDK 456
>gi|302768775|ref|XP_002967807.1| hypothetical protein SELMODRAFT_62387 [Selaginella moellendorffii]
gi|302799922|ref|XP_002981719.1| hypothetical protein SELMODRAFT_52473 [Selaginella moellendorffii]
gi|300150551|gb|EFJ17201.1| hypothetical protein SELMODRAFT_52473 [Selaginella moellendorffii]
gi|300164545|gb|EFJ31154.1| hypothetical protein SELMODRAFT_62387 [Selaginella moellendorffii]
Length = 459
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/473 (47%), Positives = 313/473 (66%), Gaps = 21/473 (4%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+CPGCGV MQDT+P PGYF H V + E + G E +
Sbjct: 1 ICPGCGVYMQDTDPLQPGYF-----RFTPPSDYHKNDVKSLEETWEDIIDGAEEADERKK 55
Query: 143 ETSEVK--KHEKP-----VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG 195
+K K EKP VVCARCH+L++YG+VK+ T E LLP FDFD VG++L +A G
Sbjct: 56 RRDMLKSFKREKPSEERLVVCARCHSLKYYGRVKEKTAETLLPTFDFDKMVGQRLKTAYG 115
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS 255
R+VVLMVVD++DFDGSFPR+VAK++S+ + ++ G +GN PR+++ TK+DLLP
Sbjct: 116 KRAVVLMVVDSSDFDGSFPRQVAKLISEVEAQMAATYRTGFTGNSPRLIVAATKVDLLPP 175
Query: 256 SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQ 315
LSP R E W+R+R G + T +H VSA KNWG+++L + + +AG RG+VW +GAQ
Sbjct: 176 QLSPMRLEQWIRKRVIIGGAPRPTAVHLVSATKNWGVQALTERITKVAGPRGDVWVVGAQ 235
Query: 316 NAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDT 375
NAGKS+L+NA+A+ + G+ S LTEA PGTT+GI+++ G+LP KL+DT
Sbjct: 236 NAGKSSLINALAR-FNVGKHE--------SRLTEAAHPGTTIGILKITGILPQNIKLYDT 286
Query: 376 PGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYV 435
PG+ H +Q+T RL E+ K V + KELKPRT+RIK GHSI + G +R+D+ E+ +IY+
Sbjct: 287 PGIFHSHQLTMRLNEEDFKSVQMRKELKPRTFRIKVGHSIQVGGYLRLDLLEAPARTIYM 346
Query: 436 TVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSS 495
TVWASP++ LHMGKTE A + +KH G +L+PP K E G++V ++F V G W++S
Sbjct: 347 TVWASPFISLHMGKTERALDVFKKHIGVELKPPSSLKSWIEQGQFVSQKFRVHGDDWEAS 406
Query: 496 SVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFTV 548
+VDIA AGLGW + LKGEA + VWTYEGV + R AL+ +++FE GFT+
Sbjct: 407 TVDIAVAGLGWVGLGLKGEAVIEVWTYEGVAVSTREALVYDYARIFETPGFTI 459
>gi|255578453|ref|XP_002530091.1| conserved hypothetical protein [Ricinus communis]
gi|223530402|gb|EEF32290.1| conserved hypothetical protein [Ricinus communis]
Length = 697
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/441 (50%), Positives = 299/441 (67%), Gaps = 18/441 (4%)
Query: 139 EAENETSEVKKHEKPV-VCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLM--SASG 195
E + E KK + V VCARCH+LR+YG+VK T ENL+PDFDFD + +L+ S++
Sbjct: 262 EKKRRAREAKKEKDEVTVCARCHSLRNYGQVKSQTAENLIPDFDFDKLISTRLIKPSSNA 321
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS 255
+VV+MVVD DFDGSFP+ A + E + K K +P++VLV TK+DLLPS
Sbjct: 322 NATVVIMVVDCVDFDGSFPKLAAMSLFKALEGTKNDPKTSK--RLPKLVLVATKVDLLPS 379
Query: 256 SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQ 315
+SP R + WVR RAR G K++ ++ VS+ K+ G+++L+ V +LAG RGNVW IGAQ
Sbjct: 380 QISPARLDKWVRHRARAAGAPKLSGVYLVSSRKDLGVRNLLSFVKELAGPRGNVWVIGAQ 439
Query: 316 NAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDT 375
NAGKSTL+NA AK +E +S LTEAPVPGTTLGI+R+ G+L A+AK++DT
Sbjct: 440 NAGKSTLINAFAK----------KEGAKISKLTEAPVPGTTLGILRIGGILSAKAKMYDT 489
Query: 376 PGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYV 435
PGLLHP ++ RL REEQK+V I KEL+ RTYR K G ++H+ GL+R+D+ ++SVE+IY+
Sbjct: 490 PGLLHPYLMSMRLNREEQKMVEIRKELQARTYRAKVGQAVHVGGLLRLDLNQASVETIYI 549
Query: 436 TVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSS 495
TVWASP + LH+GK ENA + H G +LQPP+GE R ELG+W +E V+G+SWD +
Sbjct: 550 TVWASPSVSLHLGKMENANDFWKNHAGVRLQPPVGEDRASELGEWEEREIKVTGTSWDVN 609
Query: 496 SVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFTVSKIISKA 555
+DIA AGLGWFS+ LKGEA L +W Y+G+ I LR L+ R+ E GF + K IS
Sbjct: 610 HIDIAIAGLGWFSLCLKGEATLTLWIYDGIQITLREPLVLDRASFLERPGFWLPKAIS-- 667
Query: 556 DQSLNKSKRLNEAKRKPREPE 576
++ ++ KRK E E
Sbjct: 668 -DTIGNQTKVESQKRKKLEQE 687
>gi|224090037|ref|XP_002308915.1| predicted protein [Populus trichocarpa]
gi|222854891|gb|EEE92438.1| predicted protein [Populus trichocarpa]
Length = 640
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/445 (51%), Positives = 317/445 (71%), Gaps = 24/445 (5%)
Query: 148 KKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLM--SASGARSVVLMVVD 205
K+ ++ VCARCH+LR+YG+VK+ T ENL+PDFDFD + +LM S SG +VV+MVVD
Sbjct: 215 KEKDEVTVCARCHSLRNYGQVKNQTAENLIPDFDFDRLITTRLMKPSGSGNVTVVVMVVD 274
Query: 206 AADFDGSFPRKVAKMVSDTAE---ENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
DFDGSFP++ A+ + E ++ R S +P++VLV TK+DLLPS +SPTR
Sbjct: 275 CVDFDGSFPKRAAQSLFKALEGVKDDPRT-----SKKLPKLVLVGTKVDLLPSQISPTRL 329
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ WVR RAR G K++ ++ VS+ K+ G+++L+ + +LAG RGNVW IGAQNAGKSTL
Sbjct: 330 DRWVRHRARAAGAPKLSGVYLVSSCKDVGVRNLLSFIKELAGPRGNVWVIGAQNAGKSTL 389
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NA+AK +GG V+ LTEAPVPGTT+GI+R+ G+L A+AK++DTPGLLHP
Sbjct: 390 INALAK-----KGG-----AKVTKLTEAPVPGTTVGILRIGGILSAKAKMYDTPGLLHPY 439
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
++ RL R+EQK+V I KEL+PRTYR+KAG +IH+ GL+R+D+ ++SV++IYVTVWASP
Sbjct: 440 LMSMRLNRDEQKMVEIRKELQPRTYRVKAGQTIHVGGLLRLDLNQASVQTIYVTVWASPN 499
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+ LH+GK ENA + H G +LQPP GE R ELGKW +E VSG+SWD++S+DI+ A
Sbjct: 500 VSLHIGKMENADEFWKNHIGVRLQPPTGEDRASELGKWEEREIKVSGTSWDANSIDISIA 559
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFTVSKIISKADQSLNKS 562
GLGWFSV LKGEA L +WTY+G++I LR L+ R+ E GF + K IS D N++
Sbjct: 560 GLGWFSVGLKGEATLTLWTYDGIEITLREPLVLDRAPFLERPGFLLPKAIS--DAIGNQT 617
Query: 563 KRLNEAKRKPREPEGTIHPKSSLST 587
K EAK + + E ++ S +ST
Sbjct: 618 KL--EAKIRKKLQESSLDFLSEVST 640
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 16/20 (80%)
Query: 83 VCPGCGVLMQDTNPKHPGYF 102
+CPGCGV MQD +P PGY+
Sbjct: 70 ICPGCGVFMQDKDPNLPGYY 89
>gi|357509569|ref|XP_003625073.1| hypothetical protein MTR_7g090640 [Medicago truncatula]
gi|355500088|gb|AES81291.1| hypothetical protein MTR_7g090640 [Medicago truncatula]
Length = 631
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/440 (51%), Positives = 304/440 (69%), Gaps = 17/440 (3%)
Query: 148 KKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLM--SASGARSVVLMVVD 205
K E+ VCARCH+LR+YG+VK+ ENL+PDFDFD + +LM + SG+ +VV+MVVD
Sbjct: 203 KVKEEVTVCARCHSLRNYGQVKNYMAENLIPDFDFDRLITTRLMNPAGSGSSTVVVMVVD 262
Query: 206 AADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHW 265
DFDGSFPR K + E + K+GK +P++VLV TK+DLLPS +SPTR + W
Sbjct: 263 CVDFDGSFPRTAVKSLFKALEGMQENTKKGKK--LPKLVLVATKVDLLPSQVSPTRLDRW 320
Query: 266 VRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNA 325
VR RA G K++ ++ VS+ K+ G+++++ V DLAG RGNVW IGAQNAGKSTL+NA
Sbjct: 321 VRHRASAGGAPKLSAVYLVSSRKDLGVRNVLSFVKDLAGPRGNVWVIGAQNAGKSTLINA 380
Query: 326 IAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQIT 385
AK +E V+ LTEAPVPGTTLGI+R+ G+L A+AK+FDTPGLLHP ++
Sbjct: 381 FAK----------KEGAKVTKLTEAPVPGTTLGILRIAGILSAKAKMFDTPGLLHPYLLS 430
Query: 386 TRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPL 445
RL REEQK+V I KELKPR+YRIKAG +IH+ GL R+D+ E+SV+++YVTVWASP + L
Sbjct: 431 MRLNREEQKMVEIRKELKPRSYRIKAGQAIHVGGLARLDLIEASVQTMYVTVWASPNVSL 490
Query: 446 HMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLG 505
HMGK ENA + H G +LQPPIG R ELG W +E VSGSSWD + +D++ AGLG
Sbjct: 491 HMGKIENANEIWNNHVGVRLQPPIGNDRAAELGTWKEREVKVSGSSWDVNCMDVSIAGLG 550
Query: 506 WFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFTVSKIISKADQSLNKSKRL 565
WFS+ ++GEA + +WT +G++I LR L+ R+ E GF + K IS+ + +L
Sbjct: 551 WFSLGIQGEATMKLWTNDGIEITLREPLVLDRAPSLEKPGFWLPKAISEV---IGNQTKL 607
Query: 566 NEAKRKPREPEGTIHPKSSL 585
+RK E E T + +S+
Sbjct: 608 EAQRRKKLEDEDTEYMGASI 627
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 83 VCPGCGVLMQDTNPKHPGYF 102
+CPGCG+ MQD +P PG++
Sbjct: 86 ICPGCGIFMQDNDPNLPGFY 105
>gi|356503413|ref|XP_003520504.1| PREDICTED: uncharacterized protein yqeH-like [Glycine max]
Length = 635
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/433 (52%), Positives = 298/433 (68%), Gaps = 16/433 (3%)
Query: 148 KKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLM--SASGARSVVLMVVD 205
K+ E+ VCARCH+LR+YG+VK+ TVENL+PDFDFD + +LM S SG+ +VV+MVVD
Sbjct: 206 KEKEEATVCARCHSLRNYGQVKNQTVENLIPDFDFDRLISTRLMNPSGSGSATVVVMVVD 265
Query: 206 AADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHW 265
DFDGSFPR K + E + K +S +P++VLV TK+DLLPS +SP R + W
Sbjct: 266 CVDFDGSFPRTAVKSLFQALERIQDNSK--RSKKLPKLVLVATKVDLLPSQVSPARLDRW 323
Query: 266 VRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNA 325
VR RAR G K+ ++ VS+ K+ G+++L+ V DLAG RGNVW IGAQNAGKSTL+NA
Sbjct: 324 VRNRARSGGAPKLNGVYMVSSKKDLGVRNLLSFVKDLAGPRGNVWVIGAQNAGKSTLINA 383
Query: 326 IAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQIT 385
AK A V+ LTEAP+PGTTLGI+R+ GVLPA+ K+FDTPGLLHP ++
Sbjct: 384 FAKKQGAK----------VTKLTEAPIPGTTLGILRIAGVLPAKTKMFDTPGLLHPYLMS 433
Query: 386 TRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPL 445
RL R+EQK+V I KEL+PRTYRIKA +IHI GL R+D+ E+SVE+IY TVWAS + L
Sbjct: 434 MRLNRDEQKMVEIRKELRPRTYRIKARQAIHIGGLTRLDLVEASVETIYATVWASLNVSL 493
Query: 446 HMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLG 505
HMGK ENA + H G +LQPP G R ELG W +E VSG+SWD +++DIA AGLG
Sbjct: 494 HMGKIENADEVWRNHVGIRLQPPTGNDRAAELGTWQEREVKVSGTSWDVNTIDIAIAGLG 553
Query: 506 WFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFTVSKIISKADQSLNKSKRL 565
WFS+ LKGEA +W + GV++ LR L+ R+ E GF + K IS D N++K
Sbjct: 554 WFSLCLKGEATTKLWVFHGVEVTLREPLVLDRAPSLEKPGFWLPKAIS--DAIGNQTKLE 611
Query: 566 NEAKRKPREPEGT 578
+ +++ E EGT
Sbjct: 612 AQRRKQQLEDEGT 624
>gi|115468206|ref|NP_001057702.1| Os06g0498900 [Oryza sativa Japonica Group]
gi|52076484|dbj|BAD45363.1| putative GTPase [Oryza sativa Japonica Group]
gi|113595742|dbj|BAF19616.1| Os06g0498900 [Oryza sativa Japonica Group]
gi|125555454|gb|EAZ01060.1| hypothetical protein OsI_23088 [Oryza sativa Indica Group]
gi|215686793|dbj|BAG89643.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635637|gb|EEE65769.1| hypothetical protein OsJ_21450 [Oryza sativa Japonica Group]
Length = 681
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/447 (48%), Positives = 299/447 (66%), Gaps = 20/447 (4%)
Query: 131 KKGGLVVFEAENETSEVKKHEK----PVVCARCHALRHYGKVKDVTVENLLPDFDFDHTV 186
KK L E + E KK E VVCARCH+LR+YG VK+ ENL+PDFDFD +
Sbjct: 232 KKEKLSKSERKRRAREAKKAEAEEDAAVVCARCHSLRNYGHVKNDKAENLIPDFDFDRFI 291
Query: 187 GRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLV 246
+LM S V++MV D ADFDGSFP++ AK + E + K PR+VLV
Sbjct: 292 SSRLMKRSAGTPVIVMVADCADFDGSFPKRAAKSLFKALEGRGTS----KLSETPRLVLV 347
Query: 247 VTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKR 306
TK+DLLP R E WVR RA+ G K+ + +S K+ +++LI V +LAG R
Sbjct: 348 GTKVDLLPWQQMGVRLEKWVRGRAKAFGAPKLDAVFLISVHKDLSVRNLISYVKELAGPR 407
Query: 307 GNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVL 366
NVW IGAQNAGKSTL+NA AK ++ ++ LTEA VPGTTLGI+R+ GVL
Sbjct: 408 SNVWVIGAQNAGKSTLINAFAK----------KQGVKITRLTEAAVPGTTLGILRITGVL 457
Query: 367 PAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVE 426
PA+AK++DTPGLLHP ++ RL EE+K+V I KEL+PR +R+KAG S+HI GL R+DV
Sbjct: 458 PAKAKMYDTPGLLHPYIMSMRLNSEERKMVEIRKELRPRCFRVKAGQSVHIGGLTRLDVL 517
Query: 427 ESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFH 486
++SV++IY+TVWASP + LH+GKTENA + +KHFG +LQPPI +RV ELG W ++
Sbjct: 518 KASVQTIYITVWASPSVSLHLGKTENAEELRDKHFGIRLQPPIRPERVAELGHWTERQID 577
Query: 487 VSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGF 546
VSG SWD +S+DIA +GLGW+S+ LKG A + VWT++G+D+ R+A++ +R+Q E GF
Sbjct: 578 VSGVSWDVNSMDIAISGLGWYSLGLKGNATVAVWTFDGIDVTRRDAMILHRAQFLERPGF 637
Query: 547 TVSKIISKA--DQSLNKSKRLNEAKRK 571
+ I+ A +++ K++R +A+++
Sbjct: 638 WLPIAIANAIGEETRKKNERRKKAEQR 664
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 34/82 (41%), Gaps = 24/82 (29%)
Query: 50 FSSQPTNTAPPPLSSSLALT-----------------------RDGNYDE-ATPKLTVCP 85
F P PPP S SL+ + +G DE A VCP
Sbjct: 31 FRVLPFFLCPPPQSRSLSFSPVSAVSTAGKRGRSPPPPPSPVISEGRDDEDAAVGRPVCP 90
Query: 86 GCGVLMQDTNPKHPGYFIRPSQ 107
GCGV MQD +P PG+F PS+
Sbjct: 91 GCGVFMQDADPNLPGFFKNPSR 112
>gi|449446267|ref|XP_004140893.1| PREDICTED: uncharacterized protein YqeH-like [Cucumis sativus]
Length = 648
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/439 (51%), Positives = 306/439 (69%), Gaps = 22/439 (5%)
Query: 139 EAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLM-SASGAR 197
EA+ E EV VCARCH+LR+YG+VK+ ENL+PDFDFD + +LM S S
Sbjct: 221 EAQKEIEEV------TVCARCHSLRNYGQVKNQAAENLIPDFDFDRLMANRLMKSTSNLN 274
Query: 198 SVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSL 257
+VV+MVVD DFDGSFP++ AK + E N+ K GK +P++VLV TK+DLLPS +
Sbjct: 275 NVVVMVVDCVDFDGSFPKRAAKSLFKALEGNKNDPKMGKK--LPKLVLVATKVDLLPSQI 332
Query: 258 SPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNA 317
SPTR + WVR RA+ G K+ ++ VS+ K+ G+K+L+ + +LAG RGNVW IGAQNA
Sbjct: 333 SPTRLDRWVRHRAKAAGAPKLAGVYLVSSRKDVGVKNLLSFIKELAGPRGNVWVIGAQNA 392
Query: 318 GKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPG 377
GKSTL+NA+AK +E+ V+ LTEAP+PGTTLGI+R+ G+L A+AKLFDTPG
Sbjct: 393 GKSTLINALAK----------KERAKVTKLTEAPIPGTTLGILRIGGILSAKAKLFDTPG 442
Query: 378 LLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTV 437
LLHP ++ RL REEQK+V I KEL+PRTYR+KA ++H+ GL+R+D+ ++SVE+IYVTV
Sbjct: 443 LLHPYLVSMRLNREEQKMVEIRKELQPRTYRVKARQTVHVGGLVRLDLNQASVETIYVTV 502
Query: 438 WASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSV 497
WASP + LH+GK ENA + +KH G +LQPPIG R E+GKW +E +SG+SW +S+
Sbjct: 503 WASPNVSLHLGKIENADEIWKKHAGIRLQPPIGVDRASEIGKWAEREVKISGTSWVVNSI 562
Query: 498 DIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFTVSKIISKADQ 557
DI+ AGLGWFS+ LKGEA L +W G+++ +R L+ R+ E GF +SK IS
Sbjct: 563 DISIAGLGWFSLGLKGEATLTLWIDNGIEVTMREPLVLDRATFIERPGFWLSKAIS---N 619
Query: 558 SLNKSKRLNEAKRKPREPE 576
++ +L+ +R E E
Sbjct: 620 TIGNETKLDAQRRISVEEE 638
>gi|297739886|emb|CBI30068.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/422 (50%), Positives = 294/422 (69%), Gaps = 16/422 (3%)
Query: 155 VCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFD--GS 212
VCARCH+LR+YG+VK+ ENL+PDFDFD + +LM +G ++V+ D GS
Sbjct: 219 VCARCHSLRNYGQVKNQMAENLIPDFDFDRLIATRLMKPTGTADATVVVMVVDCVDFDGS 278
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
FP++ AK + E + K S +P++VLV TK+DLLPS +SPTR + WVR RA+
Sbjct: 279 FPKRAAKSLFKALEGSRVGAK--VSRKLPKLVLVATKVDLLPSQISPTRLDRWVRNRAKA 336
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G K++ ++ VSA K+ G+++L+ + +LAG RGNVW IG+QNAGKSTL+N AK
Sbjct: 337 GGAPKLSGVYLVSARKDLGVRNLLSFIKELAGPRGNVWVIGSQNAGKSTLINTFAK---- 392
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
E ++ LTEA VPGTTLGI+R+ G+L A+AK++DTPGLLHP ++ RL R+E
Sbjct: 393 ------REGVKLTKLTEAAVPGTTLGILRIGGILSAKAKMYDTPGLLHPYLMSMRLNRDE 446
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
QK+ I KEL+PRTYR+KAG ++H+ GLMR+D+ ++SVE+IYVT+WASP + LHMGK EN
Sbjct: 447 QKMAEIRKELQPRTYRMKAGQAVHVGGLMRLDLNQASVETIYVTIWASPNVSLHMGKIEN 506
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A + KH G +LQPP+ RV E+GKW +E VSG+SWD +S+DIA AGLGWFS+ LK
Sbjct: 507 ADEIWRKHVGVRLQPPVRVDRVSEIGKWEEQEIKVSGASWDVNSIDIAVAGLGWFSLGLK 566
Query: 513 GEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFTVSKIISKADQSLNKSKRLNEAKRKP 572
GEA L +WTY+G++++LR L+ R+ E GF + K IS D N+SK EA+++
Sbjct: 567 GEATLALWTYDGIEVILREPLVLDRAPFLERPGFWLPKAIS--DAIGNQSKLEAEARKRD 624
Query: 573 RE 574
+E
Sbjct: 625 QE 626
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 75 DEATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSN 128
DE +CPGCGV MQD +P PGY+ + L ++ + ++ E SN
Sbjct: 90 DEDESYGQICPGCGVYMQDEDPNLPGYYQKRKLTLTEMPEGQEDMEGSDGEESN 143
>gi|359481892|ref|XP_002274571.2| PREDICTED: uncharacterized protein yqeH-like [Vitis vinifera]
Length = 641
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/422 (50%), Positives = 294/422 (69%), Gaps = 16/422 (3%)
Query: 155 VCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFD--GS 212
VCARCH+LR+YG+VK+ ENL+PDFDFD + +LM +G ++V+ D GS
Sbjct: 223 VCARCHSLRNYGQVKNQMAENLIPDFDFDRLIATRLMKPTGTADATVVVMVVDCVDFDGS 282
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
FP++ AK + E + K S +P++VLV TK+DLLPS +SPTR + WVR RA+
Sbjct: 283 FPKRAAKSLFKALEGSRVGAK--VSRKLPKLVLVATKVDLLPSQISPTRLDRWVRNRAKA 340
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G K++ ++ VSA K+ G+++L+ + +LAG RGNVW IG+QNAGKSTL+N AK
Sbjct: 341 GGAPKLSGVYLVSARKDLGVRNLLSFIKELAGPRGNVWVIGSQNAGKSTLINTFAK---- 396
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
E ++ LTEA VPGTTLGI+R+ G+L A+AK++DTPGLLHP ++ RL R+E
Sbjct: 397 ------REGVKLTKLTEAAVPGTTLGILRIGGILSAKAKMYDTPGLLHPYLMSMRLNRDE 450
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
QK+ I KEL+PRTYR+KAG ++H+ GLMR+D+ ++SVE+IYVT+WASP + LHMGK EN
Sbjct: 451 QKMAEIRKELQPRTYRMKAGQAVHVGGLMRLDLNQASVETIYVTIWASPNVSLHMGKIEN 510
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A + KH G +LQPP+ RV E+GKW +E VSG+SWD +S+DIA AGLGWFS+ LK
Sbjct: 511 ADEIWRKHVGVRLQPPVRVDRVSEIGKWEEQEIKVSGASWDVNSIDIAVAGLGWFSLGLK 570
Query: 513 GEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFTVSKIISKADQSLNKSKRLNEAKRKP 572
GEA L +WTY+G++++LR L+ R+ E GF + K IS D N+SK EA+++
Sbjct: 571 GEATLALWTYDGIEVILREPLVLDRAPFLERPGFWLPKAIS--DAIGNQSKLEAEARKRD 628
Query: 573 RE 574
+E
Sbjct: 629 QE 630
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 11 SKLKPIFHESFLTKITSPYLQLHPTKALKAPTSSSSSSSFSSQPTNTAPPPLSSSLALTR 70
+KL P+ E + ++ + T + T S + +Q N P +
Sbjct: 15 AKLSPVLFEDGV-------IEGNSTATFRLFTVKSKYTIQETQKNNWKNPRKVGGNPILS 67
Query: 71 DGNYDEATPKLTVCPGCGVLMQDTNPKHPGYF 102
+G DE +CPGCGV MQD +P PGY+
Sbjct: 68 EGK-DEDESYGQICPGCGVYMQDEDPNLPGYY 98
>gi|242067315|ref|XP_002448934.1| hypothetical protein SORBIDRAFT_05g001920 [Sorghum bicolor]
gi|241934777|gb|EES07922.1| hypothetical protein SORBIDRAFT_05g001920 [Sorghum bicolor]
Length = 666
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/446 (48%), Positives = 294/446 (65%), Gaps = 21/446 (4%)
Query: 130 LKKGGLVVFEAENETSEVKKHE----KPVVCARCHALRHYGKVKDVTVENLLPDFDFDHT 185
LKK L E + + E K+ E +VC+RCH+LR+YG VK+ ENL+PDFDFD
Sbjct: 221 LKKEKLSKSERKRQAREAKRAEAEEDSALVCSRCHSLRNYGLVKNDKAENLIPDFDFDRF 280
Query: 186 VGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVL 245
+ ++M S V++MVVD ADFDGSFP++ AK + + E + K PR+VL
Sbjct: 281 ISSRVMKRSAGTPVIVMVVDCADFDGSFPKRAAKSLFEALEGR----RNSKVSETPRLVL 336
Query: 246 VVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGK 305
V TK+DLLP R + WVR RA+ G K+ + +S ++ +++LI + + AG
Sbjct: 337 VGTKVDLLPWQQMGVRLDRWVRGRAKAFGAPKLDAVFLISVHRDLAVRNLISYIKESAGP 396
Query: 306 RGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGV 365
R NVW IGAQNAGKSTL+NA AK ++ ++ LTEA VPGTTLGI+RV GV
Sbjct: 397 RSNVWVIGAQNAGKSTLINAFAK----------KQGVKITRLTEAAVPGTTLGILRVTGV 446
Query: 366 LPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV 425
LPA+AK++DTPGLLHP + RL EE+K+V I KEL+PR++R+K G S+HI GL R+DV
Sbjct: 447 LPAKAKMYDTPGLLHPYIMAMRLNNEERKMVEIRKELRPRSFRVKVGQSVHIGGLTRLDV 506
Query: 426 EESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEF 485
+SS ++IYVTVWAS +PLH+GKTENA + EKHFG +LQPPIG +RV ELG W +
Sbjct: 507 LKSSAQTIYVTVWASSNVPLHLGKTENADELREKHFGIRLQPPIGPERVNELGHWTERHI 566
Query: 486 HVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAG 545
VSG+SWD +S+DIA +GLGW+S+ LKG A + +WT+EG+ + R+A++ +R+Q E G
Sbjct: 567 EVSGASWDVNSMDIAVSGLGWYSLGLKGTATVSLWTFEGIGVTERDAMILHRAQFLERPG 626
Query: 546 FTVSKIISKADQSLNKSKRLNEAKRK 571
F + I+ A L + R KRK
Sbjct: 627 FWLPIAIANA---LGEETRKKNEKRK 649
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 47 SSSFSSQPTNTAPPPLSSSLALTRDGNYDEATPKLTVCPGCGVLMQDTNPKHPGYFIRPS 106
S S S+ PT P + ++ RD +EA VCPGCGV MQD +P PG+F PS
Sbjct: 44 SLSASAVPTGRRSRPPAPVISEGRDD--EEAAVGRPVCPGCGVFMQDADPNLPGFFKNPS 101
Query: 107 QN 108
++
Sbjct: 102 RS 103
>gi|449494174|ref|XP_004159469.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein YqeH-like
[Cucumis sativus]
Length = 648
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/439 (51%), Positives = 304/439 (69%), Gaps = 22/439 (5%)
Query: 139 EAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLM-SASGAR 197
EA+ E EV VCARCH LR+YG+VK+ ENL+PDFDFD + +LM S S
Sbjct: 221 EAQKEIEEV------TVCARCHXLRNYGQVKNQAAENLIPDFDFDRLMANRLMKSTSNLN 274
Query: 198 SVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSL 257
+VV+MVVD DFDGSFP++ AK + E N+ K GK +P++VLV TK+DLLPS +
Sbjct: 275 NVVVMVVDCVDFDGSFPKRAAKSLFKALEGNKNDPKMGKK--LPKLVLVATKVDLLPSQI 332
Query: 258 SPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNA 317
SPTR + WVR RA+ G K+ ++ VS+ K+ G+K+L+ + +LAG RGNVW IGAQNA
Sbjct: 333 SPTRLDRWVRHRAKAAGAPKLAGVYLVSSRKDVGVKNLLSFIKELAGPRGNVWVIGAQNA 392
Query: 318 GKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPG 377
GKSTL+NA+AK ++ V+ LTEAP+PGTTLGI+R+ G+L A+AKLFDTPG
Sbjct: 393 GKSTLINALAK----------KKGXKVTKLTEAPIPGTTLGILRIGGILSAKAKLFDTPG 442
Query: 378 LLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTV 437
LLHP ++ RL REEQK+V I KEL+PRTYR+KA ++H+ GL+R+D+ ++SVE+IYVTV
Sbjct: 443 LLHPYLVSMRLNREEQKMVEIRKELQPRTYRVKARQTVHVGGLVRLDLNQASVETIYVTV 502
Query: 438 WASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSV 497
WASP + LH+GK ENA + +KH G +LQPPIG R E+GKW +E +SG+SW +S+
Sbjct: 503 WASPNVSLHLGKIENADEIWKKHAGIRLQPPIGVDRASEIGKWAEREVKISGTSWVVNSI 562
Query: 498 DIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFTVSKIISKADQ 557
DI+ AGLGWFS+ LKGEA L +W G+++ +R L+ R+ E GF +SK IS
Sbjct: 563 DISIAGLGWFSLGLKGEATLTLWIDNGIEVTMREPLVLDRATFIERPGFWLSKAIS---N 619
Query: 558 SLNKSKRLNEAKRKPREPE 576
++ +L+ +R E E
Sbjct: 620 TIGNETKLDAQRRISVEEE 638
>gi|226499582|ref|NP_001147795.1| IMP dehydrogenase/GMP reductase [Zea mays]
gi|195613790|gb|ACG28725.1| IMP dehydrogenase/GMP reductase [Zea mays]
gi|223944539|gb|ACN26353.1| unknown [Zea mays]
gi|413924785|gb|AFW64717.1| IMP dehydrogenase/GMP reductase [Zea mays]
Length = 668
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/446 (47%), Positives = 297/446 (66%), Gaps = 21/446 (4%)
Query: 130 LKKGGLVVFEAENETSEVKKHE----KPVVCARCHALRHYGKVKDVTVENLLPDFDFDHT 185
+KK L + + + E K+ E +VC+RCH+LR+YG VK+ ENL+PDFDFD
Sbjct: 223 MKKEKLSKSQRKRQAREAKRAEAEEDSALVCSRCHSLRNYGLVKNDKAENLIPDFDFDRF 282
Query: 186 VGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVL 245
+ +LM S V++MVVD ADFDGSFP++ AK + + E + K+ PR+VL
Sbjct: 283 ISSRLMKRSAGTPVIVMVVDCADFDGSFPKRAAKSLFEALEGR----RNSKASETPRLVL 338
Query: 246 VVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGK 305
V TK+DLLP R + WVR RA+ G K+ + +S ++ +++LI + + AG
Sbjct: 339 VGTKVDLLPWQQMGVRLDKWVRGRAKALGAPKLDGVFLISVHRDLAVRNLITYIKESAGP 398
Query: 306 RGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGV 365
R NVW IGAQNAGKSTL+NA AK ++ ++ LTEA VPGTTLGI+RV GV
Sbjct: 399 RSNVWVIGAQNAGKSTLINAFAK----------KQGVKITRLTEAAVPGTTLGILRVTGV 448
Query: 366 LPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV 425
LPA+AK++DTPGLLHP + RL EE+K+V I KE++PR++R+K G S+HI GL R+DV
Sbjct: 449 LPAKAKMYDTPGLLHPYIMAMRLNNEERKMVEIRKEMRPRSFRVKVGQSVHIGGLARLDV 508
Query: 426 EESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEF 485
+SSV++IY+TVWAS +PLH+GKTEN+ + +KHFG +LQPPIG +RV+ELG W +
Sbjct: 509 LKSSVQTIYITVWASSNVPLHLGKTENSDELRDKHFGIRLQPPIGPERVDELGHWTGRSI 568
Query: 486 HVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAG 545
VSG+SWD +S+DIA +GLGW+S+ LKG A + +WT+EG+ + R+A++ +R+Q E G
Sbjct: 569 EVSGASWDVNSMDIAVSGLGWYSLGLKGTATVSLWTFEGIGVTERDAMILHRAQFLERPG 628
Query: 546 FTVSKIISKADQSLNKSKRLNEAKRK 571
F + I+ A + + R KRK
Sbjct: 629 FWLPIAIANA---IGEETRKKNEKRK 651
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 44 SSSSSSFSSQPTNTAPPPLSSSLALTRDGNYDE-ATPKLTVCPGCGVLMQDTNPKHPGYF 102
S S+S+ + ++ P P+ S +G DE A VCPGCGV MQD +P PG+F
Sbjct: 45 SLSASTVPAGRRSSPPAPVIS------EGRDDEDAAVGRPVCPGCGVFMQDEDPNLPGFF 98
Query: 103 IRPSQN 108
PS++
Sbjct: 99 KNPSRS 104
>gi|334186050|ref|NP_191277.4| GTP binding protein [Arabidopsis thaliana]
gi|17064928|gb|AAL32618.1| putative protein [Arabidopsis thaliana]
gi|28059086|gb|AAO29986.1| putative protein [Arabidopsis thaliana]
gi|332646103|gb|AEE79624.1| GTP binding protein [Arabidopsis thaliana]
Length = 660
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/438 (49%), Positives = 309/438 (70%), Gaps = 16/438 (3%)
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMS--ASGARSVV 200
E ++ ++ VCARCH+LR+YG+VK+ ENLLPDFDFD + +L+ ++ + +VV
Sbjct: 229 EEAKKDNYDDVTVCARCHSLRNYGQVKNQAAENLLPDFDFDRLISTRLIKPMSNSSTTVV 288
Query: 201 LMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPT 260
+MVVD DFDGSFP++ AK + ++ E K K N+P++VLV TK+DLLP+ +SP
Sbjct: 289 VMVVDCVDFDGSFPKRAAKSLFQVLQKAENDPKGSK--NLPKLVLVATKVDLLPTQISPA 346
Query: 261 RFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKS 320
R + WVR RA+ G K++ ++ VSA K+ G+K+L+ + +LAG RGNVW IGAQNAGKS
Sbjct: 347 RLDRWVRHRAKAGGAPKLSGVYMVSARKDIGVKNLLAYIKELAGPRGNVWVIGAQNAGKS 406
Query: 321 TLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLH 380
TL+NA++K DG + V+ LTEAPVPGTTLGI+++ G+L A+AK++DTPGLLH
Sbjct: 407 TLINALSKK-------DGAK---VTRLTEAPVPGTTLGILKIGGILSAKAKMYDTPGLLH 456
Query: 381 PNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWAS 440
P ++ RL EE+K+V I KE++PR+YR+KAG S+HI GL+R+D+ +SVE+IY+T+WAS
Sbjct: 457 PYLMSLRLNSEERKMVEIRKEVQPRSYRVKAGQSVHIGGLVRLDLVSASVETIYITIWAS 516
Query: 441 PYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIA 500
+ LH+GKTENA + + H G +LQPPIGE R ELG W KE VSG+SWD S+DI+
Sbjct: 517 HSVSLHLGKTENAEEIFKGHSGLRLQPPIGENRASELGTWEEKEIQVSGNSWDVKSIDIS 576
Query: 501 AAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFTVSKIISKADQSLN 560
AGLGW S+ LKG A L +WTY+G+D+ LR L+ R+ E GF + K I++ +
Sbjct: 577 VAGLGWLSLGLKGAATLALWTYQGIDVTLREPLVIDRAPYLERPGFWLPKAITEVLGT-- 634
Query: 561 KSKRLNEAKRKPREPEGT 578
S +L +A+R+ ++ + T
Sbjct: 635 HSSKLVDARRRKKQQDST 652
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 57 TAPPPLSSSLALTRDGNYDEATPKLTVCPGCGVLMQDTNPKHPGYF 102
T P S +L ++ + DE K+ +CPGCG+ MQD +P PGY+
Sbjct: 72 TIFPKKSKNLIMSEGRDEDEDYGKI-ICPGCGIFMQDNDPDLPGYY 116
>gi|326495204|dbj|BAJ85698.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/415 (50%), Positives = 284/415 (68%), Gaps = 16/415 (3%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
VVCARCH+LR+YG VK+ +NL+PDFDFD + +LM S V++MVVD ADFDGSF
Sbjct: 255 VVCARCHSLRNYGHVKNDRADNLIPDFDFDRFISSRLMKRSAGTPVIVMVVDCADFDGSF 314
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
P++ AK + E + K PR+VLV TK+DLLP R E WVR RA+
Sbjct: 315 PKRAAKSLFRALEGRGSS----KLSETPRLVLVGTKVDLLPWEQMGVRLEKWVRGRAKAF 370
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G K+ ++ VS K+ +++LI V DLAG R NVW IGAQNAGKSTL+N AK
Sbjct: 371 GAPKLDAVYLVSVHKDLSVRNLISYVKDLAGPRSNVWVIGAQNAGKSTLINGFAK----- 425
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
++ ++ LTEA VPGTTLGI+R+ GVLPA+AK++DTPGLLHP ++ RL EE+
Sbjct: 426 -----KQGVNITRLTEAAVPGTTLGILRMTGVLPAKAKMYDTPGLLHPYIMSMRLNTEER 480
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
K+V I KEL+PRT+R+KAG S+HI GL R+DV E+SV++IYVTVWAS + LH+GKTENA
Sbjct: 481 KMVEIRKELRPRTFRVKAGQSVHIGGLTRLDVLEASVQTIYVTVWASANISLHLGKTENA 540
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ +KH G +LQPP+ +R ELG+W + VSG SWD SS DIA +GLGW+S+ LKG
Sbjct: 541 EELRDKHVGIRLQPPVVPERAAELGQWTERRIDVSGLSWDVSSTDIAVSGLGWYSLGLKG 600
Query: 514 EAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFTVSKIISKA--DQSLNKSKRLN 566
+A + V T++G+D+ R+A++ +R++ E GF + I+ A +++ K+ +LN
Sbjct: 601 KATVAVHTFDGIDVTQRDAMILHRAKFLERPGFLLPIAIANAIGEETRKKNAKLN 655
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 19/25 (76%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQ 107
VCPGCGV MQD +P PG+F PS+
Sbjct: 85 VCPGCGVFMQDADPDLPGFFTSPSR 109
>gi|357161135|ref|XP_003578990.1| PREDICTED: uncharacterized protein LOC100844826 [Brachypodium
distachyon]
Length = 668
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/430 (49%), Positives = 285/430 (66%), Gaps = 18/430 (4%)
Query: 130 LKKGGLVVFEAENETSEVKKHE----KPVVCARCHALRHYGKVKDVTVENLLPDFDFDHT 185
+KK L E + E K+ E VVCARCH+LR+YG VK+ +NL+PDFDFD
Sbjct: 226 MKKEKLSKSERKQRAREAKRAEAEEDSAVVCARCHSLRNYGHVKNDKADNLIPDFDFDRF 285
Query: 186 VGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVL 245
+ +LM S V++MVVD ADFDGSFP++ AK + E + K PR+VL
Sbjct: 286 ISSRLMKRSAGTPVIVMVVDCADFDGSFPKRAAKSLFKALEGRGTS----KLSETPRLVL 341
Query: 246 VVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGK 305
V TK+DLLP R E WVR RA+ G K+ + +S K+ +++LI V +LAG
Sbjct: 342 VGTKVDLLPWEQMGVRLEKWVRGRAKAFGAPKLDAVFLISVHKDLSVRNLISYVKELAGP 401
Query: 306 RGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGV 365
R NVW IGAQNAGKSTL+NA AK ++ ++ LTEA VPGTTLGI+R+ GV
Sbjct: 402 RSNVWVIGAQNAGKSTLINAFAK----------KQGVKITRLTEAAVPGTTLGILRMTGV 451
Query: 366 LPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV 425
LPA+AK++DTPGLLHP I+ RL EE+K+V I KEL+PRT+R+KAG S+HI GL R+DV
Sbjct: 452 LPAKAKMYDTPGLLHPYIISMRLNSEERKMVEIRKELRPRTFRVKAGQSVHIGGLTRLDV 511
Query: 426 EESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEF 485
E+SV++IYVTVW S + LH+GKTENA + KH G +LQPP+ +RV ELG+W +
Sbjct: 512 LEASVQTIYVTVWVSCNISLHLGKTENAEELRSKHIGIRLQPPVCAERVAELGQWTERRI 571
Query: 486 HVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAG 545
VSG SWD +S DIA +GLGW+S+ LKG A + V+T++G+D+ R+A++ +R++ E G
Sbjct: 572 DVSGISWDVNSTDIAVSGLGWYSLGLKGNATVAVFTFDGIDVTRRDAMILHRAKFLERPG 631
Query: 546 FTVSKIISKA 555
F + I+ A
Sbjct: 632 FWLPIAIANA 641
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 12 KLKPIFHESFLTKITSPY-LQLHPTKA---LKAPTSSSSSSSFSSQPTNTAPPPLSSSLA 67
+L P+ FL T P L+LHP + L P S + S++ S+ T A PP +
Sbjct: 18 RLPPV---RFLLHTTPPLRLRLHPFLSPPPLALPQSLNLSAAVST--TKRARPPTNPGQV 72
Query: 68 LTRDGNYDEATPKLTVCPGCGVLMQDTNPKHPGYFIRPS 106
++ + D + VCPGCGV MQD +P PG+F PS
Sbjct: 73 ISEGRDVDA---RRAVCPGCGVFMQDDDPDLPGFFTSPS 108
>gi|297820508|ref|XP_002878137.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297323975|gb|EFH54396.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 642
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/438 (49%), Positives = 308/438 (70%), Gaps = 18/438 (4%)
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMS--ASGARSVV 200
E ++ ++ VCARCH+LR+YG+VK+ ENLLPDFDFD + +L+ ++ + +VV
Sbjct: 213 EEAKKDNYDDVTVCARCHSLRNYGQVKNQAAENLLPDFDFDRLISTRLIKPMSNSSTTVV 272
Query: 201 LMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPT 260
+MVVD DFDGSFP++ AK + ++ E K K N+P++VLV TK+DLLP+ +SP
Sbjct: 273 VMVVDCVDFDGSFPKRAAKSLFQVLQKAENDPKGSK--NLPKLVLVATKVDLLPTQISPA 330
Query: 261 RFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKS 320
R + WVR RA+ G K++ ++ VSA K+ G+K+L+ + +LAG RGNVW IGAQNAGKS
Sbjct: 331 RLDRWVRHRAKAGGAPKLSGVYMVSARKDLGVKNLLAYIKELAGPRGNVWVIGAQNAGKS 390
Query: 321 TLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLH 380
TL+NA++K DG + V+ LTEAPVPGTTLGI+R+ G+L A+AK++DTPGLLH
Sbjct: 391 TLINALSKK-------DGAK---VTRLTEAPVPGTTLGILRIGGILSAKAKMYDTPGLLH 440
Query: 381 PNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWAS 440
P ++ RL EE+K+V I KEL+PR+YR AG S+HI GL+R+D+ +SVE+IY+T+WAS
Sbjct: 441 PYLMSLRLNPEERKMVEIRKELQPRSYR--AGQSVHIGGLVRLDLVSASVETIYITIWAS 498
Query: 441 PYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIA 500
+ LH+GKTENA + + H G +LQPPIGE R ELG W KE VSG+SWD S+DI+
Sbjct: 499 HSVSLHLGKTENAEEIFKGHSGLRLQPPIGENRASELGTWEEKEIQVSGNSWDVKSIDIS 558
Query: 501 AAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFTVSKIISKADQSLN 560
AGLGW S+ LKG A L +WTY+G+D+ LR L+ R+ E GF + K I++ +
Sbjct: 559 VAGLGWLSLGLKGAATLALWTYQGIDVTLREPLVIDRAPFLERPGFWLPKAITEVLGT-- 616
Query: 561 KSKRLNEAKRKPREPEGT 578
S +L++A+R+ ++ + T
Sbjct: 617 HSSKLDDARRRKKQQDST 634
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 57 TAPPPLSSSLALTRDGNYDEATPKLTVCPGCGVLMQDTNPKHPGYF 102
T P S +L ++ + DE K+ +CPGCG+ MQD +P PG++
Sbjct: 73 TIFPKKSKNLIMSEGKDEDEEYGKI-ICPGCGIFMQDNDPDLPGFY 117
>gi|6735297|emb|CAB68124.1| putative protein [Arabidopsis thaliana]
Length = 629
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 239/583 (40%), Positives = 341/583 (58%), Gaps = 94/583 (16%)
Query: 57 TAPPPLSSSLALTRDGNYDEATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSH 116
T P S +L ++ + DE K+ +CPGCG+ MQD +P PGY+ + N +
Sbjct: 72 TIFPKKSKNLIMSEGRDEDEDYGKI-ICPGCGIFMQDNDPDLPGYYQKRKVIANNLEGDE 130
Query: 117 LVH----------------------------VANESEFSNSLKKGGLVVFEAENETSEVK 148
V + N E SNS + G FE E++ E K
Sbjct: 131 HVENDELAGFEMVDDDADEEEEGEDDEMDDEIKNAIEGSNSESESG---FEWESDEWEEK 187
Query: 149 K-------------------------------HEKPVVCARCHALRHYGKVKDVTVENLL 177
K ++ VCARCH+LR+YG+VK+ ENLL
Sbjct: 188 KEVNDVELDEKKKRVSKTERKKIAREEAKKDNYDDVTVCARCHSLRNYGQVKNQAAENLL 247
Query: 178 PDFDFDHTVGRKLMS--ASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEG 235
PDFDFD + +L+ ++ + +VV+MVVD DFDGSFP++ AK + ++ E K
Sbjct: 248 PDFDFDRLISTRLIKPMSNSSTTVVVMVVDCVDFDGSFPKRAAKSLFQVLQKAENDPKGS 307
Query: 236 KSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSL 295
K N+P++VLV TK+DLLP+ +SP R + WVR RA+ G K++ ++ VSA K+ G+K+L
Sbjct: 308 K--NLPKLVLVATKVDLLPTQISPARLDRWVRHRAKAGGAPKLSGVYMVSARKDIGVKNL 365
Query: 296 IDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGT 355
+ + +LAG RGNVW IGAQNAGKSTL+NA++K DG + V+ LTEAPVPGT
Sbjct: 366 LAYIKELAGPRGNVWVIGAQNAGKSTLINALSKK-------DGAK---VTRLTEAPVPGT 415
Query: 356 TLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSI 415
TLGI+++ G+L A+AK++DTPGLLHP ++ RL EE+K+ AG S+
Sbjct: 416 TLGILKIGGILSAKAKMYDTPGLLHPYLMSLRLNSEERKM---------------AGQSV 460
Query: 416 HIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVE 475
HI GL+R+D+ +SVE+IY+T+WAS + LH+GKTENA + + H G +LQPPIGE R
Sbjct: 461 HIGGLVRLDLVSASVETIYITIWASHSVSLHLGKTENAEEIFKGHSGLRLQPPIGENRAS 520
Query: 476 ELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLP 535
ELG W KE VSG+SWD S+DI+ AGLGW S+ LKG A L +WTY+G+D+ LR L+
Sbjct: 521 ELGTWEEKEIQVSGNSWDVKSIDISVAGLGWLSLGLKGAATLALWTYQGIDVTLREPLVI 580
Query: 536 YRSQVFEVAGFTVSKIISKADQSLNKSKRLNEAKRKPREPEGT 578
R+ E GF + K I++ + S +L +A+R+ ++ + T
Sbjct: 581 DRAPYLERPGFWLPKAITEVLGT--HSSKLVDARRRKKQQDST 621
>gi|87241448|gb|ABD33306.1| Protein C4orf14 homolog, related [Medicago truncatula]
Length = 616
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/440 (48%), Positives = 291/440 (66%), Gaps = 32/440 (7%)
Query: 148 KKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLM--SASGARSVVLMVVD 205
K E+ VCARCH+LR+YG+VK+ ENL+PDFDFD + +LM + SG+ +VV+MVVD
Sbjct: 203 KVKEEVTVCARCHSLRNYGQVKNYMAENLIPDFDFDRLITTRLMNPAGSGSSTVVVMVVD 262
Query: 206 AADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHW 265
DFDGSFPR K + E + K+GK +P++VLV TK+DLLPS +SPTR + W
Sbjct: 263 CVDFDGSFPRTAVKSLFKALEGMQENTKKGKK--LPKLVLVATKVDLLPSQVSPTRLDRW 320
Query: 266 VRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNA 325
VR RA G K++ ++ VS+ K+ G+++++ V DLAG RGNVW IGAQNAGKSTL+NA
Sbjct: 321 VRHRASAGGAPKLSAVYLVSSRKDLGVRNVLSFVKDLAGPRGNVWVIGAQNAGKSTLINA 380
Query: 326 IAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQIT 385
AK +E V+ LTEAPVPGTTLGI+R+ G+L A+AK+FDTPGLLHP ++
Sbjct: 381 FAK----------KEGAKVTKLTEAPVPGTTLGILRIAGILSAKAKMFDTPGLLHPYLLS 430
Query: 386 TRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPL 445
RL REEQK+ AG +IH+ GL R+D+ E+SV+++YVTVWASP + L
Sbjct: 431 MRLNREEQKM---------------AGQAIHVGGLARLDLIEASVQTMYVTVWASPNVSL 475
Query: 446 HMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLG 505
HMGK ENA + H G +LQPPIG R ELG W +E VSGSSWD + +D++ AGLG
Sbjct: 476 HMGKIENANEIWNNHVGVRLQPPIGNDRAAELGTWKEREVKVSGSSWDVNCMDVSIAGLG 535
Query: 506 WFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFTVSKIISKADQSLNKSKRL 565
WFS+ ++GEA + +WT +G++I LR L+ R+ E GF + K IS+ + +L
Sbjct: 536 WFSLGIQGEATMKLWTNDGIEITLREPLVLDRAPSLEKPGFWLPKAISEV---IGNQTKL 592
Query: 566 NEAKRKPREPEGTIHPKSSL 585
+RK E E T + +S+
Sbjct: 593 EAQRRKKLEDEDTEYMGASI 612
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 83 VCPGCGVLMQDTNPKHPGYF 102
+CPGCG+ MQD +P PG++
Sbjct: 86 ICPGCGIFMQDNDPNLPGFY 105
>gi|384251297|gb|EIE24775.1| hypothetical protein COCSUDRAFT_10321, partial [Coccomyxa
subellipsoidea C-169]
Length = 386
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 173/398 (43%), Positives = 243/398 (61%), Gaps = 14/398 (3%)
Query: 149 KHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAAD 208
+HE V+CARC++L HYG+VK E LP FD VGRK+ R+VVL VVDAAD
Sbjct: 3 EHEARVLCARCYSLSHYGQVKSARAEADLPQFDLGQKVGRKIGLTRHRRAVVLCVVDAAD 62
Query: 209 FDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQ 268
FDGS PR + + E + +G R VL V K DLLP+ + R E W+R
Sbjct: 63 FDGSLPRTALQALFSNIEGYQVILGKGDV----RFVLAVNKADLLPAQATAERLEKWIRM 118
Query: 269 RAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAK 328
RA++ G+ K T + VSA+K WG++ L+ + G G+VW +GAQNAGKS+L+NA+ +
Sbjct: 119 RAKQGGMPKPTSVELVSALKGWGVEQLLVRLHREVGTTGDVWVVGAQNAGKSSLINAMKR 178
Query: 329 SVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRL 388
+V G+ +N LT A +PGTTLG+++V G++P + +FDTPG+ H Q+++RL
Sbjct: 179 AVRHGK-----PRN---ELTTAALPGTTLGMLKVPGLMPPRCNMFDTPGVPHDFQLSSRL 230
Query: 389 TREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMG 448
+ +E KL+ + LKPRT+R AG ++ + G+ R+DV S ++Y+TVWAS L H G
Sbjct: 231 SADEVKLLLPKRRLKPRTFRAAAGQTVFVGGVARIDVLTSPGATLYLTVWASDDLTCHFG 290
Query: 449 KTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFS 508
KTE A EK G L PP+ ++ +LG V + G++W SS DIA AGLGWF+
Sbjct: 291 KTEGAEERYEKSLGTMLVPPLEQE--HKLGPLVPCQVTAQGTNWRQSSTDIAVAGLGWFA 348
Query: 509 VRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGF 546
V + GEA VWT+EGV I R A+LP ++ E GF
Sbjct: 349 VGVSGEAEFNVWTHEGVAITTRAAVLPDYARDLERPGF 386
>gi|297609351|ref|NP_001063000.2| Os09g0364500 [Oryza sativa Japonica Group]
gi|255678838|dbj|BAF24914.2| Os09g0364500 [Oryza sativa Japonica Group]
Length = 434
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 179/348 (51%), Positives = 224/348 (64%), Gaps = 32/348 (9%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGL------- 135
+CPGCG+ MQ ++P PG+F PS R A+++ S SLK G L
Sbjct: 84 LCPGCGIAMQSSDPSLPGFFSLPSPKSPDYRARLAPVTADDTRISASLKSGHLREGEAAA 143
Query: 136 ----------VVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHT 185
V E E E KK K VVCARCH+LRHYG VK E LLPDFDF
Sbjct: 144 AASSSSAAVGVGVEVEKEG---KKENKVVVCARCHSLRHYGVVKRPEAEPLLPDFDFVAA 200
Query: 186 VGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVL 245
VG +L S SGARS+VL++ DA+DFDGSFPR VA++V+ E + WK G N+PR +L
Sbjct: 201 VGPRLASPSGARSLVLLLADASDFDGSFPRAVARLVAAAGEAHGSDWKHGAPANLPRALL 260
Query: 246 VVTKIDLLPS-SLSPTRFEHWVRQRAR--EDGISKITKLHFVSAVKNWGLKSLIDDVVDL 302
VVTK+DLLP+ SLSP W RAR G ++ +H VSA + WG++ L+D V L
Sbjct: 261 VVTKLDLLPTPSLSPDDVHAWAHSRARAGAGGDLRLAGVHLVSAARGWGVRDLLDHVRQL 320
Query: 303 AGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRV 362
AG RGNVWA+GA+N GKSTLLNAIA+ G E LTEAPVPGTTL +++V
Sbjct: 321 AGSRGNVWAVGARNVGKSTLLNAIARC-------SGIEGGPT--LTEAPVPGTTLDVIQV 371
Query: 363 EGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIK 410
+GVL +QAKLFDTPGLLH +Q+T+RLTREEQKLV ++KE++PRTYR+K
Sbjct: 372 DGVLGSQAKLFDTPGLLHGHQLTSRLTREEQKLVRVSKEMRPRTYRLK 419
>gi|308805346|ref|XP_003079985.1| Predicted GTPases (ISS) [Ostreococcus tauri]
gi|116058442|emb|CAL53631.1| Predicted GTPases (ISS) [Ostreococcus tauri]
Length = 519
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 170/487 (34%), Positives = 270/487 (55%), Gaps = 35/487 (7%)
Query: 82 TVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEF----------SNSLK 131
+ CPGCGV +QD + PG+++ P + L +E F + +
Sbjct: 8 SACPGCGVGLQDVDANAPGFYVTPKKMLAAADADADADAEDEEAFDLAPLVDAEDAEAKL 67
Query: 132 KGGLVVFEAENETSEVKKHEKP-----VVCARCHALRHYGKVKDVTVENLLPDFDFDHTV 186
+F+ ++E ++ + +K +VCARC ALR G+VK+ E+LLP FDF+ +
Sbjct: 68 DAFNALFDEDDEGTKRRAKKKKKGPPVIVCARCFALRTSGRVKNEAGESLLPSFDFERVI 127
Query: 187 GRKLMSASGARS-VVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVL 245
G + S VVL++VD D+DGSFP ++ ++ V V+L
Sbjct: 128 GDRFNRLREKNSAVVLLMVDLIDYDGSFPVDAVDVIEPYVQKG-----------VLEVLL 176
Query: 246 VVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGK 305
V K+DL+P+ + TR +VRQR+++ G+S+ + +H VSA G++ L + + ++ +
Sbjct: 177 VANKVDLMPAQCTRTRLTSFVRQRSKDFGLSRCSGVHLVSAKAGMGMEILANQLEEMLDR 236
Query: 306 RGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGV 365
V+ +GAQNAGKS+L+N ++ +P+PGTTLG+V++ +
Sbjct: 237 GKEVYVVGAQNAGKSSLINRLSSKYGG-------PGEEDGGPIASPLPGTTLGMVKLASL 289
Query: 366 LPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV 425
LP + ++DTPGLL P Q++ RLT EE K+V NK L PRTYRI+ G +IHI L R+D+
Sbjct: 290 LPNGSDVYDTPGLLQPFQLSARLTGEEMKMVLPNKRLTPRTYRIQVGGTIHIGALARIDL 349
Query: 426 EESSVESIYVTVWASPYLPLHMGKTENAC-TMVEKHFGRQLQPPIGEKRVEELGKWVRKE 484
ES ++Y+TVWAS +P H + A T +EKH G ++ PP+G++R+++ G+W +
Sbjct: 350 LESPQRTLYLTVWASNKVPTHYSTSAKAADTFLEKHAGTKMTPPLGQERMQQFGQWGSRL 409
Query: 485 FHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVA 544
+V G W S+ DI+ AGL W V G A+ VWT+EGV +V R AL+P +
Sbjct: 410 VNVYGEDWQKSTRDISIAGLCWIGVGCNGNASFRVWTHEGVQVVTREALVPDMDKQLMSP 469
Query: 545 GFTVSKI 551
GF+ +
Sbjct: 470 GFSFENV 476
>gi|414885177|tpg|DAA61191.1| TPA: hypothetical protein ZEAMMB73_567116 [Zea mays]
Length = 454
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 174/342 (50%), Positives = 223/342 (65%), Gaps = 24/342 (7%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKG--------- 133
VCPGCG+ MQ ++P+ PG+F+ PS R A+++ S SLK G
Sbjct: 81 VCPGCGIAMQSSDPELPGFFLLPSAKSPNYRARLAPVTADDTRISASLKSGHLREDIQPS 140
Query: 134 -GLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMS 192
G A E +E K K +VCARCH+LRHYG+VK E LLPDFDF VG +L S
Sbjct: 141 GGDKPAAAAAEMAEAKGEGKVLVCARCHSLRHYGRVKHPDAERLLPDFDFVAAVGPRLAS 200
Query: 193 ASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDL 252
SGARS+VL++ DA+DFDGSFPR VA++V+ E + WK G N+PR +LVVTK+DL
Sbjct: 201 PSGARSLVLLLADASDFDGSFPRAVARLVAAAGEAHRADWKHGAPANLPRALLVVTKLDL 260
Query: 253 LPS-SLSPTRFEHWVRQRAREDGIS--KITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNV 309
LP+ SLSP W RAR + ++ +H VSA + WG++ L++ V +LAG RGNV
Sbjct: 261 LPTPSLSPDDVHAWAHSRARAGAGADLRLAGVHLVSATRGWGVRDLLEHVRELAGTRGNV 320
Query: 310 WAIGAQNAGKSTLLNAIAKSVD-AGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPA 368
WA+GA+N GKSTLLNAIA+ GR LTEAPVPGTTL +++++GVL A
Sbjct: 321 WAVGARNVGKSTLLNAIARCCGIVGR----------PTLTEAPVPGTTLDVIKLDGVLGA 370
Query: 369 QAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIK 410
QAKLFDTPGLLH +Q+T+RLT EE KLV + KE+ PRTYRIK
Sbjct: 371 QAKLFDTPGLLHGHQLTSRLTSEEMKLVQVRKEMSPRTYRIK 412
>gi|307103636|gb|EFN51894.1| hypothetical protein CHLNCDRAFT_139489 [Chlorella variabilis]
Length = 648
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 170/424 (40%), Positives = 250/424 (58%), Gaps = 14/424 (3%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+CARC +LRHYG VK E LP FDF+ VG K+ RSVVL VVD ADFDGS
Sbjct: 223 VLCARCFSLRHYGSVKSEAAEAELPAFDFERRVGLKIQLQKFRRSVVLCVVDVADFDGSL 282
Query: 214 PRKVAKMV--SDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAR 271
PR+ + + D + + G R+++ V K DLLP ++P R E WVR+R
Sbjct: 283 PRQALRSILPPDLQQGPLDVGRPLPLGF--RLLVAVNKADLLPKQVTPARLEKWVRRRMA 340
Query: 272 EDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVD 331
+ G+ + + +H VS+ K G++ L+ D+ G RG+VW +GAQNAGKS+L+NA+ +
Sbjct: 341 QAGLPRPSAVHVVSSTKQRGVRELLSDLQAAVGVRGDVWVVGAQNAGKSSLINAMRQVAR 400
Query: 332 AGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTRE 391
R D +T AP+PGTTLG++RV G+LP K+ DTPG+ H +Q++ LT +
Sbjct: 401 LPRDKD---------VTTAPLPGTTLGMLRVTGLLPTGCKMLDTPGVPHAHQLSGHLTAD 451
Query: 392 EQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTE 451
E ++V ++LKPRT+RI AG ++ I GL R+DV +S ++Y++V+AS + H+GKTE
Sbjct: 452 EMRMVLPRRQLKPRTFRIGAGQTVMIGGLARVDVVDSPGATLYLSVFASDEIVCHLGKTE 511
Query: 452 NACTMVEKHFGRQLQPPI-GEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVR 510
A H G +L PP+ GE+R+ E G SW +SS D+A AGLGW V
Sbjct: 512 TAEERYAMHAGGKLCPPLGGEQRMAAFPPLRPTEVTAEGDSWKASSKDVAIAGLGWVGVG 571
Query: 511 LKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFTVSKIISKADQSLNKSKRLNEAKR 570
+ G AAL VW GV + +AL+P ++ E GF V+ ++ ++++ AK+
Sbjct: 572 VSGTAALRVWAPPGVAVTTHDALVPDYARDLERPGFGVALTEVGKNRREEEARQFKAAKQ 631
Query: 571 KPRE 574
+ R+
Sbjct: 632 QQRK 635
>gi|145347663|ref|XP_001418282.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578511|gb|ABO96575.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 604
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 160/415 (38%), Positives = 240/415 (57%), Gaps = 20/415 (4%)
Query: 139 EAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-AR 197
EA ++ K+ VVCARC ALR G+VK+ E LLP FDF VG +G R
Sbjct: 164 EATKRRAKKKRGPPTVVCARCFALRTSGRVKNAAAEVLLPSFDFARVVGDSFERLTGEGR 223
Query: 198 SVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSL 257
+VVL++VD DFDGSFP ++ E+ V V+LV K+DL+P+
Sbjct: 224 AVVLLMVDLLDFDGSFPVDAIDVIEPYVEKG-----------VVDVLLVANKVDLMPTQC 272
Query: 258 SPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNA 317
+ TR +VR+R+++ G+S+ +H VSA G+ L + D+ + V+ +GAQNA
Sbjct: 273 TRTRLTSFVRRRSKDFGLSRCAGVHLVSAKAGMGVAILAQQLEDMLDRGKEVYVVGAQNA 332
Query: 318 GKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPG 377
GKS+L+N +++ +P+PGTTLG+V++ +LP + ++DTPG
Sbjct: 333 GKSSLINRLSQRYGG-------PGEEDGGPIASPLPGTTLGMVKLPALLPNSSDVYDTPG 385
Query: 378 LLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTV 437
LL P Q+++RL +E K+V NK + PRTYRI+ G +IHI GL R+DV ES ++Y+TV
Sbjct: 386 LLQPFQLSSRLNGDEMKVVLPNKRVTPRTYRIEVGGTIHIGGLARIDVLESPQRTLYLTV 445
Query: 438 WASPYLPLHMGK-TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSS 496
WAS + H + T+ A T +EKH G ++ PPIGE R+ + G W + ++ G W +S+
Sbjct: 446 WASNKVATHYARTTKGADTFLEKHGGTKMTPPIGEARMRQFGAWGSRVVNIYGEDWQAST 505
Query: 497 VDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFTVSKI 551
DI+ AGL W V G A+ +WT+EGV +V R AL+P ++ GF+ +
Sbjct: 506 RDISIAGLCWIGVGCNGNASFKIWTHEGVQVVTREALVPDMAKSLMSPGFSFENV 560
>gi|159485524|ref|XP_001700794.1| NO synthase-like protein [Chlamydomonas reinhardtii]
gi|158281293|gb|EDP07048.1| NO synthase-like protein [Chlamydomonas reinhardtii]
Length = 733
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 190/519 (36%), Positives = 276/519 (53%), Gaps = 47/519 (9%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEF-------------SNSL 130
C GCG+ +Q + + PGYFI P++ R A+E F + +
Sbjct: 161 CCGCGMRLQRRDAEAPGYFIIPARLFEPKRDPD----ADEDGFGRAGRGRGGAGAGAEAG 216
Query: 131 KKGGLVVFEAENETSE------------VKKHEKP-VVCARCHALRHYGKVKDVTVENLL 177
+ G ++ A E V+ E+P V+C RC +L+H GKVK E L
Sbjct: 217 GELGELMKAARQEMDADAEADAYDDVGLVRADEEPDVLCQRCFSLKHSGKVKVQAAETAL 276
Query: 178 PDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKS 237
PDFD VGRK+ R+VVL VVD DFDGS PR + + +E A E
Sbjct: 277 PDFDLGKKVGRKIHLQKDRRAVVLCVVDMWDFDGSLPRAALRSLLPPGVTSEAAAPEDLK 336
Query: 238 GNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLID 297
+ +++ K DLLP +P R + WVR R ++ G+ K+ VSA K G+K ++
Sbjct: 337 FS---LMVAANKFDLLPPQATPARVQQWVRLRLKQAGLPPPDKVFLVSAAKGTGVKDMVQ 393
Query: 298 DVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTL 357
DV G RG++W +GAQNAGKS+L+ A+ + AG G GE T APVPGTTL
Sbjct: 394 DVRQALGYRGDLWVVGAQNAGKSSLIAAMKRL--AGTAGKGEP-------TIAPVPGTTL 444
Query: 358 GIVRVEGV-LPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIH 416
G+++V G+ L + + FDTPG+ H +Q+T+RL E+ K V +K LK RTYR+ G+++
Sbjct: 445 GLLQVPGLPLGPKHRAFDTPGVPHGHQLTSRLGLEDVKQVLPSKPLKGRTYRLAPGNTLL 504
Query: 417 I-AGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHF-GRQLQPPIGEKRV 474
I GL R+DV S ++Y+TV+ S ++ LH+GKTE A + + G L PP R
Sbjct: 505 IGGGLARLDVVSSPGATLYLTVFVSHHVNLHLGKTEGAEERLPRLVEGGLLTPPDDPARA 564
Query: 475 EELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
E+L V + V G+ W S+VD+A AGLGW V G A +WT GV + AL+
Sbjct: 565 EQLPPLVPLDVEVEGTDWRRSTVDVAIAGLGWVGVGCAGRAGFRLWTLPGVAVTTHAALI 624
Query: 535 PYRSQVFEVAGFTVSKIISKADQSLNKSKRLNEAKRKPR 573
P +++FE G VS ++ KA + + + +A+R R
Sbjct: 625 PDMAEMFERPG--VSSLLPKAQTRAHAAVKEKKAERAER 661
>gi|255081316|ref|XP_002507880.1| predicted protein [Micromonas sp. RCC299]
gi|226523156|gb|ACO69138.1| predicted protein [Micromonas sp. RCC299]
Length = 668
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 172/428 (40%), Positives = 241/428 (56%), Gaps = 23/428 (5%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
VVCARC++LR+YGKVK+ E L+P FDF VG +L +VVL +VD DFDGSF
Sbjct: 254 VVCARCYSLRNYGKVKNEAAEILMPSFDFGRVVGDRLSRLGPGGAVVLCLVDLVDFDGSF 313
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
P ++S NE V+LV TK+DLLP+ + R +VR+RA++
Sbjct: 314 PVDAVDILSPYVA-NESV----------DVLLVGTKVDLLPTQCTRARVTSFVRRRAKDL 362
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ + + +H VSA G+ L + + L + VW +GAQNAGKS+L+N ++K
Sbjct: 363 GLRRASGVHLVSAHSGMGVNILSEQLETLLDEGREVWVVGAQNAGKSSLINRLSKKYGGP 422
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
+ + SHL PGTTLG+V++ G+LP + ++DTPGLL P Q++ RLT EE
Sbjct: 423 G--PEDGGPLASHL-----PGTTLGVVKLPGLLPNGSDVYDTPGLLQPFQVSGRLTAEEA 475
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHM---GKT 450
+ V K L PRTYR + G S+HI GL R+DV + ++Y+TVWAS +P H G+
Sbjct: 476 RAVLPRKRLAPRTYRAEIGSSVHIGGLARIDVVDGPQRTLYLTVWASHDVPTHYMVKGEG 535
Query: 451 ENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVR 510
A EKH G +L PP+GE RV +LG+W + V G SW S DI+ GLGW V
Sbjct: 536 GKADAFYEKHAGGKLSPPVGENRVAQLGEWGCRTVTVYGESWQRSDRDISIGGLGWVGVG 595
Query: 511 LKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFTVSKIISKADQSLNKSKRL--NEA 568
+ G A+ VWT+EGV + R AL+P S+ GF+ + SKR+
Sbjct: 596 VSGNASFRVWTHEGVQVETREALVPDMSRDLCRPGFSDEQQPGGGGDRARPSKRIMRKGG 655
Query: 569 KRKPREPE 576
R P++ E
Sbjct: 656 YRAPKKSE 663
>gi|303285748|ref|XP_003062164.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456575|gb|EEH53876.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 527
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 155/399 (38%), Positives = 230/399 (57%), Gaps = 25/399 (6%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V CARC++LRH+G VK+ E L+P FDF VG KL +V+L++VD DFD SF
Sbjct: 103 VTCARCYSLRHHGVVKNQAAEILMPSFDFGRVVGNKLKRTGPGGAVILLLVDIVDFDASF 162
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
P + ++ V+LV K+DLLP+ + R + R+RA+
Sbjct: 163 PIDAVDFLDPYVKDE-----------TVDVLLVANKVDLLPTRCTRARVSSFARRRAKSH 211
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ K +H VSA G+ +L + ++ L VW +GAQN GKS+L+ +++ D
Sbjct: 212 GLRKAAGVHLVSAHTGMGINTLSEQLMQLLEDGREVWVVGAQNVGKSSLIVRLSRRFD-- 269
Query: 334 RGGDGEEKN--IVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTRE 391
G G E + SHL PGTTLG+V++ +LP ++DTPGLL P Q+++RLT E
Sbjct: 270 --GPGPEDGGPLASHL-----PGTTLGVVKLPKLLPNGTDVYDTPGLLQPFQVSSRLTGE 322
Query: 392 EQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHM---G 448
E ++V + L PRTYR++ G SIH+ GL R+D + ++Y+TVW S + H G
Sbjct: 323 EARMVLPRRRLSPRTYRVEVGGSIHLGGLARVDYLDGPQRTVYLTVWVSDDVVSHYVVRG 382
Query: 449 KTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFS 508
+ A + EKH G +L PPIGE RV++LG+W + V G+ W++S+ DI+ GLGW
Sbjct: 383 ENGKADALYEKHAGGKLSPPIGENRVKQLGEWGSRTVTVYGTDWNTSTRDISIGGLGWVG 442
Query: 509 VRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFT 547
V + GEA+ VWT+EGV++ R AL+P ++ GF+
Sbjct: 443 VGVNGEASFRVWTHEGVNVETREALVPDMARALHRPGFS 481
>gi|412993269|emb|CCO16802.1| predicted protein [Bathycoccus prasinos]
Length = 644
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/422 (36%), Positives = 242/422 (57%), Gaps = 28/422 (6%)
Query: 140 AENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKL--MSASGAR 197
A + + +K+ +VCARC +LR+ G+ K+V E LLP FDF +VG ++ + +
Sbjct: 187 ALKKMNRLKRKPPAIVCARCFSLRNTGRPKNVNAEILLPSFDFKRSVGTQMERYPNNSKK 246
Query: 198 SVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSL 257
VVL+VVD DFDGSFP + AE +VLV K+DL+P+
Sbjct: 247 GVVLVVVDLVDFDGSFPVDAVDALEPHAERG-----------AIEIVLVANKVDLMPAQA 295
Query: 258 SPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG-----NVWAI 312
+ R +VR+RA+ G+ +++ SA G++ L D++ D+ RG +V+ +
Sbjct: 296 TRARLTQFVRRRAKAFGMQSASEVLLASATAGMGIRVLSDELEDILRNRGGHKKKDVYVV 355
Query: 313 GAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKL 372
GAQNAGKS+L+N ++ D G + SH VPGTT+G++++EG+LP + +
Sbjct: 356 GAQNAGKSSLINRLSSRYDGPTDKTG--GPLASH-----VPGTTIGVLKLEGILPNETDV 408
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES 432
+DTPGLL P+Q++ R+T +E K++ K + PRTYRI+ G +IHI G+ R+D+ ++ +
Sbjct: 409 YDTPGLLQPHQLSARMTADEAKIILPKKRMIPRTYRIQIGGTIHIGGVSRIDLLDAPQRT 468
Query: 433 IYVTVWASPYLPLHM--GKTENACTMVEKHFGRQLQPPI-GEKRVEELGKWVRKEFHVSG 489
IYVTVW S +PLH +N + KH G +L PP+ GE+ LG+W ++ V G
Sbjct: 469 IYVTVWCSNDVPLHYTTNGAKNGDEIYAKHAGTKLTPPLGGEEGALRLGRWGSRKVSVYG 528
Query: 490 SSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFTVS 549
SW S+ DI+ AG+GW ++ G A VWT+EGV + R AL+P S+ GF+
Sbjct: 529 DSWSESTRDISIAGVGWVAIACVGNADFKVWTHEGVQLETREALVPDISKSMMKPGFSFE 588
Query: 550 KI 551
+
Sbjct: 589 NV 590
>gi|302845529|ref|XP_002954303.1| hypothetical protein VOLCADRAFT_118673 [Volvox carteri f.
nagariensis]
gi|300260508|gb|EFJ44727.1| hypothetical protein VOLCADRAFT_118673 [Volvox carteri f.
nagariensis]
Length = 722
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 173/476 (36%), Positives = 248/476 (52%), Gaps = 43/476 (9%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKK------GGLVV 137
C GCG+ +Q + + PG+F P++ L R + A E + + GG
Sbjct: 263 CCGCGMKLQRQDERAPGFFTIPARLLEPPRGAAGPAAAGEDAGEVPVVRRELGNWGGGED 322
Query: 138 FEAENETSEVKK---HEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSAS 194
E E +V E V+C RC+ L H GK+K E LP FD VGRK+
Sbjct: 323 RHDEVEFDDVGALGADEPDVLCQRCYWLTHAGKLKSYEGEAALPTFDLSKKVGRKIHLQK 382
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
++VVL VVD DFDGS PR+ + +E A +E K ++++ K DLLP
Sbjct: 383 DRKAVVLCVVDLWDFDGSLPRQAISALLPPGSGDE-APQELKF----KLMVAANKFDLLP 437
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
S + R + WVR R ++ G+ K+ VSA K G+K + D+ G RG++W +GA
Sbjct: 438 SVATVPRVQQWVRTRLKQAGLPHADKVFMVSAAKGLGVKDM--DIRQALGFRGDLWVVGA 495
Query: 315 QNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGV-LPAQAKLF 373
QNAGKS+L+ A+ + AG G G+ T APVPGTTLG+++V G+ L + + F
Sbjct: 496 QNAGKSSLIRAMKRL--AGTDGKGDP-------TVAPVPGTTLGLLQVPGIPLGPKHRTF 546
Query: 374 DTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHI-AGLMRMDVEESSVES 432
DTPG+ H +Q+T+ L E K K GHS+ + AGL R+DV + ++
Sbjct: 547 DTPGVPHTHQLTSHLNPEVVK---------------KPGHSVLLGAGLARVDVVSAPGQT 591
Query: 433 IYVTVWASPYLPLHMGKTENACTMVEKHFGRQL-QPPIGEKRVEELGKWVRKEFHVSGSS 491
+Y+TV+ S ++ LHMGKTE A V+ L PP + V L KW E V G+
Sbjct: 592 LYLTVFVSAHVNLHMGKTEGADDKVKSLTQNGLLSPPESPEEVAALPKWQPVEVEVEGTD 651
Query: 492 WDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFT 547
W S+VD+A AGLGW V +G+A L WT GV + AL+P ++ FE G +
Sbjct: 652 WSRSTVDVAVAGLGWVGVGCRGKAHLRFWTLPGVAVTTHAALIPDYAKEFEKKGVS 707
>gi|397620424|gb|EJK65712.1| hypothetical protein THAOC_13399 [Thalassiosira oceanica]
Length = 613
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 147/520 (28%), Positives = 252/520 (48%), Gaps = 73/520 (14%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNS------------LK 131
CP CG QDT+ PGY + P + +V+ + + + E +S L+
Sbjct: 122 CPACGSDFQDTDEMKPGY-LPPDKFETQVKLKQIEDIQRQQEKDDSDEWSPEDEVDWLLR 180
Query: 132 KGGLVVFEAENETSEV--------------KKHEKPVVCARCHALRHYGKVKDVTVENLL 177
+ G+ E ++++S + + +K V+C RCH L+++G V+ +NL
Sbjct: 181 QSGV---EGQDDSSSIDIDALADEMGLDLEELAKKKVICKRCHGLQNFGTVE----KNLR 233
Query: 178 PDFDFDHTVGRK-----LMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAW 232
P + + T+ ++ LM +V++ +VD DF GS ++ K+ D
Sbjct: 234 PGWTDEPTLSQEQFRKLLMPLQNKVAVIIALVDLFDFSGSVLPELDKIAGDNP------- 286
Query: 233 KEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKL----HFVSAVK 288
V+L K DLLPS + R E+WVR+ ++ I + VS
Sbjct: 287 ----------VILAANKADLLPSEMGHVRAENWVRRELEYLDVNSIANIGGAVRLVSCKT 336
Query: 289 NWGLKSLIDDVVDLAG-KRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHL 347
+G+ +L++ LA K +++ +GA NAGKS + +K R G+ + +
Sbjct: 337 GYGISALMEKAQSLAEEKECDIYVVGAANAGKS--YDGASKKNGKMRAGNANKWK--GSV 392
Query: 348 TEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTY 407
T +P+PGTTL ++V+ L L+DTPGLL P +T RLT EE K+V K ++P T+
Sbjct: 393 TTSPLPGTTLQFIKVD--LSGGKVLYDTPGLLVPGCLTERLTPEELKIVVPKKRVEPVTF 450
Query: 408 RIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQP 467
RI+AG + GL R+++ + T + + + LH+ + A + H G+ L P
Sbjct: 451 RIQAGKCALVGGLARVELI-GDCKPFLFTFFVANEIKLHLTSSLKADDFISSHVGKLLTP 509
Query: 468 PI--GEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGV 525
P+ G+ R+EE+G++ E V G W ++ DI GLGW +V G A + + +G+
Sbjct: 510 PLEPGQARLEEIGEFEYHEIEVQGEGWKQAAADITLRGLGWVAVTGAGRAKVRIGVPKGI 569
Query: 526 DIVLRNALLPYRSQVFE-VAGFTVSKIISKADQSLNKSKR 564
+ LR L+P+ V+E A +T + + K+ +S +R
Sbjct: 570 GVSLRPPLMPF--DVWETTAKYTGGRSVRKSGKSRTGKRR 607
>gi|452822685|gb|EME29702.1| GTP-binding protein [Galdieria sulphuraria]
Length = 547
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 201/412 (48%), Gaps = 54/412 (13%)
Query: 155 VCARCHALRH---------YGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVD 205
VC RC+ + H G +D T +++L ++L + R +++ +VD
Sbjct: 137 VCQRCYYMVHRTLVEDQLKIGATEDSTNKDILHSLKL---FEQRLENICSKRCIIVYMVD 193
Query: 206 AADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHW 265
DFDGSF ++ + +GN P V+L+V KIDLLP ++ R W
Sbjct: 194 IFDFDGSFVSRLPFI----------------TGNNP-VILIVNKIDLLPKDINIGRLYVW 236
Query: 266 VRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGK-RGNVWAIGAQNAGKSTLLN 324
++ + G++KI ++HFVS K++ + D++ L +V+ +G N GKST +N
Sbjct: 237 LKNQCEARGLTKIHRIHFVSCTKDYRMGETKADIIRLVQYLNADVYVVGCTNVGKSTFIN 296
Query: 325 AIAKSVDAGRGGD------GEEKNIVS--------------HLTEAPVPGTTLGIVRVEG 364
+ + + G G ++ S LT + PGTTL +R+
Sbjct: 297 RLLSNTVEKKTGQELLNYLGLKQGQFSLTELKRAFKDKKDPQLTTSCFPGTTLNPIRIH- 355
Query: 365 VLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMD 424
++DTPG++ P+QIT LT EE K+V K ++ ++R+ G IH GL R++
Sbjct: 356 -FGRSHSMYDTPGIIQPHQITHLLTSEEIKMVLPKKRVRVVSFRLMEGKCIHFGGLARLE 414
Query: 425 VEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKE 484
+ + + + TV+ S + +H T A ++E H G LQPPI ++ +ELG + KE
Sbjct: 415 MLQG--KPFFFTVFMSNEVKVHPSTTAKAEELLETHVGGLLQPPISWRKYKELGNFKAKE 472
Query: 485 FHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPY 536
F V G W SS DI +GLGW +V G + V +GV + LR + P+
Sbjct: 473 FEVDGVGWLQSSHDIVISGLGWVAVTGCGRLKVRVVAPKGVGVFLREPIAPF 524
>gi|172056802|ref|YP_001813262.1| GTP-binding protein YqeH [Exiguobacterium sibiricum 255-15]
gi|171989323|gb|ACB60245.1| Nitric-oxide synthase [Exiguobacterium sibiricum 255-15]
Length = 374
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 141/453 (31%), Positives = 216/453 (47%), Gaps = 92/453 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q +PK PGY P L++
Sbjct: 12 CAGCGVAIQTEDPKAPGY--APKSALDR-------------------------------- 37
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
+ V+C RC L+HY +++DV L D DF K++ G + ++V+
Sbjct: 38 --------EMVICQRCFKLKHYNQIQDVA----LTDDDF-----VKILDGIGQKDALVVK 80
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
+VD DF+GS+ + + V GK+ V+LV K DLLP SL+P R
Sbjct: 81 IVDIFDFNGSWLPGLHRFV-------------GKND----VLLVGNKADLLPKSLNPNRL 123
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+W+RQ ++E G+ + +H +SA K G+ L + + D K +V+ +G N GKSTL
Sbjct: 124 MNWMRQTSKELGLRPV-DVHLISAKKGHGVDELAEKI-DYYRKGRDVYVVGCTNVGKSTL 181
Query: 323 LNAIAKSVDAGRGGDGEEKNI-VSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
+N + K R G+ EE I VSH PGTTL ++ + L L+DTPG+++
Sbjct: 182 INQVIK-----RFGEEEEAVITVSHF-----PGTTLDLIDIP--LDDNCNLYDTPGIINH 229
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ + + KL+ KE+KP+ ++I ++ GL R+D E + S ++ S
Sbjct: 230 HQMAHYVDARDLKLITPKKEIKPQVFQIHPQQTLFFGGLARLDYMEGNKRSF--VIYMSN 287
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L +H K + A + H G L PP EK +E L VR EF S D+ DI
Sbjct: 288 DLKVHRTKLDKADDLYANHNGELLSPP-NEKTLEMLPPLVRHEF----SLRDNMKTDIVF 342
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +V KG + + +GV + LR AL+
Sbjct: 343 SGLGWVAVHGKG-GRVAAYAPKGVAVSLREALV 374
>gi|407476612|ref|YP_006790489.1| ribosome biogenesis protein GTPase YqeH [Exiguobacterium
antarcticum B7]
gi|407060691|gb|AFS69881.1| Ribosome biogenesis protein GTPase YqeH [Exiguobacterium
antarcticum B7]
Length = 368
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 141/453 (31%), Positives = 216/453 (47%), Gaps = 92/453 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q +PK PGY P L++
Sbjct: 6 CAGCGVAIQTEDPKAPGY--APKSALDR-------------------------------- 31
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
+ V+C RC L+HY +++DV L D DF K++ G + ++V+
Sbjct: 32 --------EMVICQRCFKLKHYNQIQDVA----LTDDDF-----VKILDGIGQKDALVVK 74
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
+VD DF+GS+ + + V GK+ V+LV K DLLP SL+P R
Sbjct: 75 IVDIFDFNGSWLPGLHRFV-------------GKND----VLLVGNKADLLPKSLNPNRL 117
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+W+RQ ++E G+ + +H +SA K G+ L + + D K +V+ +G N GKSTL
Sbjct: 118 MNWMRQTSKELGLRPV-DVHLISAKKGHGVDELAEKI-DYYRKGRDVYVVGCTNVGKSTL 175
Query: 323 LNAIAKSVDAGRGGDGEEKNI-VSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
+N + K R G+ EE I VSH PGTTL ++ + L L+DTPG+++
Sbjct: 176 INQVIK-----RFGEEEEAVITVSHF-----PGTTLDLIDIP--LDDNCNLYDTPGIINH 223
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ + + KL+ KE+KP+ ++I ++ GL R+D E + S ++ S
Sbjct: 224 HQMAHYVDGRDLKLITPKKEIKPQVFQIHPQQTLFFGGLARLDYMEGNKRSF--VIYMSN 281
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L +H K + A + H G L PP EK +E L VR EF S D+ DI
Sbjct: 282 DLKVHRTKLDKADDLYANHNGELLSPP-NEKTLEMLPPLVRHEF----SLRDNMKTDIVF 336
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +V KG + + +GV + LR AL+
Sbjct: 337 SGLGWVAVHGKG-GRVAAYAPKGVAVSLREALV 368
>gi|219127817|ref|XP_002184124.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404355|gb|EEC44302.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 710
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/407 (31%), Positives = 203/407 (49%), Gaps = 42/407 (10%)
Query: 147 VKKHEKPVVCARCHALRHYGKVKDV-----TVENLLPDFDFDHTVGRKLMSASGAR-SVV 200
V+ +K V+C RCH L+++GKV+D T E LL F R+L+ + +V+
Sbjct: 304 VELSKKMVICKRCHGLQNFGKVQDSLRPGWTKEPLLSQEKF-----RELLRPIKEKPAVI 358
Query: 201 LMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPT 260
+ +VD DF GS V + + A EN V+L K DLLPS +
Sbjct: 359 VALVDLFDFSGS----VLPELDEIAGENP-------------VILAANKADLLPSEMGRV 401
Query: 261 RFEHWVRQRAREDGISKITKLH----FVSAVKNWGLKSLIDDVVDLAGK-RGNVWAIGAQ 315
R E WVR+ G+ + + VS G+ L++ LA + G+++ +GA
Sbjct: 402 RAESWVRRELEYLGVKSLAGMRGAVRLVSCKTGAGINDLLEKARGLAEEIDGDIYVVGAA 461
Query: 316 NAGKSTLLNAIAK----SVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAK 371
NAGKSTLLN + + G+ G +T +P+PGTTL ++V+ L
Sbjct: 462 NAGKSTLLNFVLGQDKVNRSPGKARAGNRNAFKGAVTTSPLPGTTLKFIKVD--LGGGRS 519
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
L+DTPGLL +T LT EE K+V K ++P T R+ G + + GL R+++ S
Sbjct: 520 LYDTPGLLVLGTVTQLLTPEELKIVVPKKPIEPVTLRLSTGKCVLVGGLARIELIGDSRP 579
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPI--GEKRVEELGKWVRKEFHVSG 489
++ T + + + LH E A V KH G L PP+ G KR+EE+G++ + G
Sbjct: 580 FMF-TFFVANEIKLHPTDIERADEFVLKHAGGMLTPPLAPGPKRMEEIGEFEDHIVDIQG 638
Query: 490 SSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPY 536
+ W ++ DI+ GLGW +V G A + + +G+ + +R L+P+
Sbjct: 639 AGWKEAAADISLTGLGWVAVTGAGTAQVKISVPKGIGVSVRPPLMPF 685
>gi|357235992|ref|ZP_09123335.1| GTP-binding protein [Streptococcus criceti HS-6]
gi|356883974|gb|EHI74174.1| GTP-binding protein [Streptococcus criceti HS-6]
Length = 368
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 141/452 (31%), Positives = 209/452 (46%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q + + PGY + S E E
Sbjct: 6 CIGCGAKIQSQDKEAPGYTPQSS-------------------------------IEKSQE 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
T E+ C RC LRHY ++ DV + D DF KL+ G + +++L
Sbjct: 35 TGEL-------YCQRCFRLRHYNEIVDVAIS----DDDF-----LKLLHEVGDSDALILN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS +++ V+ GN V+LV K D+LP S+ +
Sbjct: 79 VVDIFDFNGSVIPSLSRFVA---------------GN--DVLLVGNKKDILPKSVKNGKV 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L SA +K LI + L R +V+ +G N GKSTL
Sbjct: 122 TQWLTERAHEEGLRPVDVL-LTSAQNGQAIKELIARIEKLRAGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI K + GD E +T + PGTTL ++E L A +FDTPG++H +
Sbjct: 180 INAIIKEIT----GDQEV------ITTSRFPGTTLD--KIEIPLDDGAYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ ++ K V+ KE+KP+TY++ ++ + GL R D E + T +
Sbjct: 228 QMAHYLSAKDLKFVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFVEGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K E A KH G L PP K V K VR EF ++G + D+ +
Sbjct: 286 LKLHRTKLEGADDFYLKHAGSLLTPP-SAKEVANFPKLVRHEFTITGKT------DVVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW VR+ G A + W EGV +++R A++
Sbjct: 339 GLGW--VRVNGSARVAAWAPEGVGVMVRKAII 368
>gi|418008288|ref|ZP_12648155.1| GTP-binding protein [Lactobacillus casei UW4]
gi|410546966|gb|EKQ21209.1| GTP-binding protein [Lactobacillus casei UW4]
Length = 374
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 138/454 (30%), Positives = 209/454 (46%), Gaps = 94/454 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q T+PK PGY P L+K + ++E
Sbjct: 12 CIGCGAILQTTDPKKPGYL--PKATLSKA--------------------------DPDDE 43
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ VT L D DF +L++A G + ++++
Sbjct: 44 ----------IYCQRCFRLRHYNEIAPVT----LTDDDF-----LRLLNAIGESNALIVN 84
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + V D V+LV K D+LP SL+P R
Sbjct: 85 VIDIFDFNGSIIPGLHRFVGDNP-----------------VILVGNKADVLPKSLNPNRL 127
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
++W++Q+A+ G+ + + SA K +G+ L+D + R +V+ +G N GKSTL
Sbjct: 128 KNWLQQQAKAQGLRPVATM-LASAKKGFGVDELLDAIEKYRDHR-DVYVVGVTNTGKSTL 185
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K E + +T + PGTTL R+ L L DTPG++H +
Sbjct: 186 INRIIK----------ELTGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRH 233
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ + ++ KLV+ +KP TY++ G +I + GL R D S V+
Sbjct: 234 QMAHFVGPKDLKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRNSF--VVYTDNQ 291
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K ENA +KH GR L PP ++ V + VR EF D+ A
Sbjct: 292 LTLHRTKLENADDFYQKHVGRLLSPPQADE-VPDFPPLVRFEF------TPKEKADLVFA 344
Query: 503 GLGWFSVRLKGEAALGVWTY--EGVDIVLRNALL 534
GLGW +V A + V Y +GVD++LR A +
Sbjct: 345 GLGWITV----PAGVTVAGYAPKGVDVLLRRAFI 374
>gi|227890565|ref|ZP_04008370.1| GTP-binding protein [Lactobacillus salivarius ATCC 11741]
gi|417810594|ref|ZP_12457273.1| GTP-binding protein [Lactobacillus salivarius GJ-24]
gi|227867503|gb|EEJ74924.1| GTP-binding protein [Lactobacillus salivarius ATCC 11741]
gi|335349390|gb|EGM50890.1| GTP-binding protein [Lactobacillus salivarius GJ-24]
Length = 373
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 144/459 (31%), Positives = 211/459 (45%), Gaps = 88/459 (19%)
Query: 76 EATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGL 135
E ++ C GCG +Q NP GY ES ++KKG
Sbjct: 3 ETNNEILYCIGCGAKIQSKNPNELGY-------------------TPES----AVKKG-- 37
Query: 136 VVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG 195
ET E+ C RC LRHY ++ DV+ L D DF R L
Sbjct: 38 ------LETEEL-------YCQRCFRLRHYNEIADVS----LTDDDF----LRLLNQIGE 76
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS 255
+ S+++ VVD DF+GS + + V GK+ V+LV K DLLP
Sbjct: 77 SDSLIVNVVDIFDFNGSVIPGLHRFV-------------GKND----VLLVGNKSDLLPK 119
Query: 256 SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQ 315
SL +R + W+RQ A + G+ I + SA K + + +L++ ++D K +V+ +G
Sbjct: 120 SLKRSRIKDWLRQEANKQGLRPI-DVALTSASKGYEIDNLLE-LIDKYRKGRDVYVVGVT 177
Query: 316 NAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDT 375
N GKSTL+N I K ++ I +T + PGTTL ++E L DT
Sbjct: 178 NVGKSTLINRIIK----------QQTGISELITTSRFPGTTLD--KIEIPFDDGKNLIDT 225
Query: 376 PGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYV 435
PG++H Q+ LT + K + KE+KP+ Y++ G +I + L R D S V
Sbjct: 226 PGIIHKQQMAHYLTGKSLKFASPQKEIKPKVYQLNEGQTIFLGSLARFDYISGGRTS--V 283
Query: 436 TVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSS 495
+ LPLH K +NA EKH G LQPP E+ +E++ K R EF +S S
Sbjct: 284 IAYFDNNLPLHRTKLQNADKFYEKHAGELLQPPTREE-LEKMPKLTRFEFKISEKS---- 338
Query: 496 SVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
D+ +GLGW S L + W EGV +++R A++
Sbjct: 339 --DLVFSGLGWIS--LSPNTIVAGWAPEGVGVLIRKAMI 373
>gi|222100701|ref|YP_002535269.1| GTP-binding protein, HSR1-related [Thermotoga neapolitana DSM 4359]
gi|221573091|gb|ACM23903.1| GTP-binding protein, HSR1-related [Thermotoga neapolitana DSM 4359]
Length = 363
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 212/451 (47%), Gaps = 94/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
CPGCG +Q +PK PGY R + F L++G
Sbjct: 3 CPGCGANIQFEDPKKPGYIPREA-------------------FEKRLEEG---------- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
K ++C RC ++HYGK++ + D+DF + +L S G VVL V
Sbjct: 34 --------KEILCQRCFRIKHYGKLEPIEY-----DWDFRN----QLKSYLGGFEVVLWV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+G++ +A ++ EGK VV V+ K+DLLP +++ +
Sbjct: 77 IDIFDFEGTYREDIANLL------------EGKD-----VVYVINKLDLLPRAVTVKEVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
WV++R + +I VSA KN+GLKSL+ + L K IG N GKS+LL
Sbjct: 120 EWVKKRIKAKDPERI---RIVSAEKNYGLKSLVKLLARLTDK---ALVIGVTNVGKSSLL 173
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I +N +S PGTTLGI+R V L+DTPG++ ++
Sbjct: 174 NRICTH-----------ENTISSF-----PGTTLGILR-RKVKGENLYLYDTPGIMTKDR 216
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
I L E QK + +EL +T++ + +I + GL R DV+ + S +++S +
Sbjct: 217 ILDLLDPECQKTILPKEELSRKTFKPERNRTIFMGGLCRFDVDYETERSPIFLLFSSREV 276
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
H + E A +++ G L+PP + R E+ W +++F ++ ++A AG
Sbjct: 277 TFHETRRERADELMKNRLGDLLKPPCSKARYEDF-TWKKEKFVLNEGE------ELAVAG 329
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW SVR +G + V E V +V+R AL+
Sbjct: 330 LGWMSVR-RGPLTVEVTVPENVKLVVREALV 359
>gi|417788024|ref|ZP_12435707.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus salivarius NIAS840]
gi|334308201|gb|EGL99187.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus salivarius NIAS840]
Length = 373
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 144/459 (31%), Positives = 211/459 (45%), Gaps = 88/459 (19%)
Query: 76 EATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGL 135
E ++ C GCG +Q NP GY ES ++KKG
Sbjct: 3 ETNNEILYCIGCGAKIQSKNPNELGY-------------------TPES----AVKKG-- 37
Query: 136 VVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG 195
ET E+ C RC LRHY ++ DV+ L D DF R L
Sbjct: 38 ------LETEEL-------YCQRCFRLRHYNEIADVS----LTDDDF----LRLLNQIGE 76
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS 255
+ S+++ VVD DF+GS + + V GK+ V+LV K DLLP
Sbjct: 77 SDSLIVNVVDIFDFNGSVIPGLHRFV-------------GKND----VLLVGNKSDLLPK 119
Query: 256 SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQ 315
SL +R + W+RQ A + G+ I + SA K + + +L++ ++D K +V+ +G
Sbjct: 120 SLKRSRIKDWLRQEANKQGLRPI-DVALTSASKGYEIDNLLE-LIDKYRKGRDVYVVGVT 177
Query: 316 NAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDT 375
N GKSTL+N I K ++ I +T + PGTTL ++E L DT
Sbjct: 178 NVGKSTLINRIIK----------QQTGISELITTSRFPGTTLD--KIEIPFDDGKNLIDT 225
Query: 376 PGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYV 435
PG++H Q+ LT + K + KE+KP+ Y++ G +I + L R D S V
Sbjct: 226 PGIIHKQQMAHYLTGKSLKFASPQKEIKPKVYQLNEGQTIFLGSLARFDYISGGRTS--V 283
Query: 436 TVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSS 495
+ LPLH K +NA EKH G LQPP E+ +E++ K R EF +S S
Sbjct: 284 IAYFDNNLPLHRTKLQNADKFYEKHAGELLQPPTREE-LEKIPKLTRFEFKISEKS---- 338
Query: 496 SVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
D+ +GLGW S L + W EGV +++R A++
Sbjct: 339 --DLVFSGLGWIS--LSPNTIVAGWAPEGVGVLIRKAMI 373
>gi|449887306|ref|ZP_21786721.1| GTP-binding protein YqeH [Streptococcus mutans SA41]
gi|449904711|ref|ZP_21792811.1| GTP-binding protein YqeH [Streptococcus mutans M230]
gi|449938690|ref|ZP_21805016.1| GTP-binding protein YqeH [Streptococcus mutans 2ST1]
gi|449942606|ref|ZP_21806101.1| GTP-binding protein YqeH [Streptococcus mutans 11A1]
gi|450039516|ref|ZP_21836227.1| GTP-binding protein YqeH [Streptococcus mutans T4]
gi|450078570|ref|ZP_21851060.1| GTP-binding protein YqeH [Streptococcus mutans N3209]
gi|450154621|ref|ZP_21877857.1| GTP-binding protein YqeH [Streptococcus mutans 21]
gi|450181255|ref|ZP_21887717.1| GTP-binding protein YqeH [Streptococcus mutans 24]
gi|449150345|gb|EMB54113.1| GTP-binding protein YqeH [Streptococcus mutans 11A1]
gi|449162533|gb|EMB65664.1| GTP-binding protein YqeH [Streptococcus mutans 2ST1]
gi|449200330|gb|EMC01363.1| GTP-binding protein YqeH [Streptococcus mutans T4]
gi|449209880|gb|EMC10376.1| GTP-binding protein YqeH [Streptococcus mutans N3209]
gi|449237723|gb|EMC36538.1| GTP-binding protein YqeH [Streptococcus mutans 21]
gi|449246925|gb|EMC45219.1| GTP-binding protein YqeH [Streptococcus mutans 24]
gi|449253035|gb|EMC51000.1| GTP-binding protein YqeH [Streptococcus mutans SA41]
gi|449259062|gb|EMC56610.1| GTP-binding protein YqeH [Streptococcus mutans M230]
Length = 368
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 207/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGY--TPKSALEK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ DV + D DF KL+ G +R++V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRTLVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + +S + ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSVIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSGKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L +SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLMERAHEEGLRPL-DLILISAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 228 QMAHYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A T +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLAGADTFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + W EGV +V R AL+
Sbjct: 339 GLGW--IRINGRAKIAAWAPEGVAVVTRKALI 368
>gi|450067533|ref|ZP_21846692.1| GTP-binding protein YqeH [Streptococcus mutans NLML9]
gi|449207955|gb|EMC08597.1| GTP-binding protein YqeH [Streptococcus mutans NLML9]
Length = 368
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 121/382 (31%), Positives = 190/382 (49%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDF-DFDHTVGRKLMSASGARSVVLMVVDAADFDGS 212
+ C RC LRHY ++ DV + + DF F H VG +R++V+ V+D DF+GS
Sbjct: 38 IYCQRCFRLRHYNEITDVHISD--NDFLKFLHEVG-------DSRALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + +S + ++LV K D+LP S+ + W+ +RA E
Sbjct: 89 VIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSGKITQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + L SA W +K LI + +L R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
+KNI+ T + PGTTL ++E L + +FDTPG++H +Q+ L+ +
Sbjct: 190 -------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRHQMAHYLSDKA 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 238 LKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKLAG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A T +KH G L PP +K + K VR EF + D+ +GLGW +R+
Sbjct: 296 ADTFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFSGLGW--IRIN 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + W EGV +V R AL+
Sbjct: 347 GRAKIAAWAPEGVAVVTRKALI 368
>gi|229552536|ref|ZP_04441261.1| GTP-binding protein [Lactobacillus rhamnosus LMS2-1]
gi|258539909|ref|YP_003174408.1| GTP-binding protein YqeH [Lactobacillus rhamnosus Lc 705]
gi|385835558|ref|YP_005873332.1| ribosome biogenesis GTPase YqeH [Lactobacillus rhamnosus ATCC 8530]
gi|229314088|gb|EEN80061.1| GTP-binding protein [Lactobacillus rhamnosus LMS2-1]
gi|257151585|emb|CAR90557.1| GTP-binding protein [Lactobacillus rhamnosus Lc 705]
gi|355395049|gb|AER64479.1| ribosome biogenesis GTPase YqeH [Lactobacillus rhamnosus ATCC 8530]
Length = 374
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 210/452 (46%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q T+PK PGY P+ L K EA+++
Sbjct: 12 CIGCGAILQTTDPKKPGYL--PAATLAKA--------------------------EADDD 43
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ VT L D DF +L++A G + ++++
Sbjct: 44 ----------IYCQRCFRLRHYNEIAPVT----LTDDDF-----LRLLNAIGESNALIVN 84
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + V D V+LV K D+LP SL+P +
Sbjct: 85 VIDIFDFNGSVIPGLHRFVGDNP-----------------VILVGNKADVLPKSLNPNKL 127
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
++W++Q+A+ G+ +T L SA K +G+ L+ + R +V+ +G N GKSTL
Sbjct: 128 KNWLQQQAKAQGLRPVTTL-LASAKKGFGVDELLTAIEKYREHR-DVYVVGVTNTGKSTL 185
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K + + +T + PGTTL R+ L L DTPG++H +
Sbjct: 186 INRIIKQL----------TGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRH 233
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ + ++ KLV+ +KP TY++ G +I + GL R D +S ++A
Sbjct: 234 QMAHFVGSKDLKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRQSF--VIYADTQ 291
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
LPLH K NA +KH G L PP ++ V + VR EF S D+ A
Sbjct: 292 LPLHRTKLINADEFYQKHVGGLLAPPQADE-VRDFPPLVRFEFTPKEKS------DLVFA 344
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V + + +GVD++LR A +
Sbjct: 345 GLGWITV--PAGVTIAGYAPKGVDVLLRKAFI 374
>gi|329770262|ref|ZP_08261651.1| ribosome biogenesis GTPase YqeH [Gemella sanguinis M325]
gi|328836966|gb|EGF86612.1| ribosome biogenesis GTPase YqeH [Gemella sanguinis M325]
Length = 372
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 207/453 (45%), Gaps = 89/453 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q +PK GY P + K S LV
Sbjct: 7 CIGCGVEIQSEDPKKQGYL--PKNVVEKSEDSQLV------------------------- 39
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
C RC L++Y +V DV L DF + S S +++ V
Sbjct: 40 ------------CKRCFRLKNYNEVSDVE----LGADDFYQLIK----SLSKKDALIAKV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF GS+ V +V GN +VL+ K+DLLP S+ + +
Sbjct: 80 VDIFDFSGSWIEDVVDIV----------------GNNKDIVLIANKLDLLPKSVKQNKIK 123
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG--NVWAIGAQNAGKST 321
W+ + +E GI K+ + VSA+KN G++ + V L R +V+ IGA N GKST
Sbjct: 124 QWLFKVLKEKGI-KVKDILLVSAIKNQGVE---EAAVRLDQLRNGKDVYIIGATNVGKST 179
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
+N K ++ G +KN++ T + PGTTLG++ + L ++DTPG++
Sbjct: 180 FIN---KLIELTSG----DKNVI---TTSHFPGTTLGMIEIP--LDRATSIYDTPGIILD 227
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
I L + KLV KE+K R +++ A S+ G+ RMD + +S T++AS
Sbjct: 228 YDIAHYLDAKSLKLVMPKKEIKARIFQLNAEQSLFFGGMARMDFVKGERQSF--TLYASN 285
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
+ +H K NA + EKH G+ L+PP E + GK VRK F + D+ DI
Sbjct: 286 LVEIHRTKLSNADALFEKHLGQMLKPPF-EDNISIFGKQVRKSFKI-----DNRKTDIVI 339
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +V + + E +++ +R +++
Sbjct: 340 SGLGWITVNSDSGCKIDILVPEEIEVFVRESII 372
>gi|418961114|ref|ZP_13513001.1| GTPase YqeH [Lactobacillus salivarius SMXD51]
gi|380344781|gb|EIA33127.1| GTPase YqeH [Lactobacillus salivarius SMXD51]
Length = 373
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 143/459 (31%), Positives = 211/459 (45%), Gaps = 88/459 (19%)
Query: 76 EATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGL 135
E ++ C GCG +Q NP GY ES ++KKG
Sbjct: 3 ETNNEILYCIGCGAKIQSKNPNELGY-------------------TPES----AVKKG-- 37
Query: 136 VVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG 195
ET E+ C RC LRHY ++ DV+ L D DF R L
Sbjct: 38 ------LETEEL-------YCQRCFRLRHYNEIADVS----LTDDDF----LRLLNQIGE 76
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS 255
+ S+++ VVD DF+GS + + V GK+ V+LV K DLLP
Sbjct: 77 SDSLIVNVVDIFDFNGSVIPGLHRFV-------------GKND----VLLVGNKSDLLPK 119
Query: 256 SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQ 315
SL +R + W+RQ A + G+ + + SA K + + +L++ ++D K +V+ +G
Sbjct: 120 SLKRSRIKDWLRQEANKQGLRPV-DVALTSASKGYEIDNLLE-LIDKYRKGRDVYVVGVT 177
Query: 316 NAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDT 375
N GKSTL+N I K ++ I +T + PGTTL ++E L DT
Sbjct: 178 NVGKSTLINRIIK----------QQTGISELITTSRFPGTTLD--KIEIPFDDGKNLIDT 225
Query: 376 PGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYV 435
PG++H Q+ LT + K + KE+KP+ Y++ G +I + L R D S V
Sbjct: 226 PGIIHKQQMAHYLTGKSLKFASPQKEIKPKVYQLNEGQTIFLGSLARFDYISGGRTS--V 283
Query: 436 TVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSS 495
+ LPLH K +NA EKH G LQPP E+ +E++ K R EF +S S
Sbjct: 284 IAYFDNNLPLHRTKLQNADKFYEKHAGELLQPPTREE-LEKMPKLTRFEFKISEKS---- 338
Query: 496 SVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
D+ +GLGW S L + W EGV +++R A++
Sbjct: 339 --DLVFSGLGWIS--LSPNTIVAGWAPEGVGVLIRKAMI 373
>gi|311031591|ref|ZP_07709681.1| GTP-binding protein YqeH [Bacillus sp. m3-13]
Length = 367
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/454 (29%), Positives = 214/454 (47%), Gaps = 94/454 (20%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
VC GCGV +Q NP+ GY P +LNK
Sbjct: 6 VCYGCGVAIQTENPEGLGY--APPSSLNK------------------------------- 32
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
+ V+C RC L+HY +++DV+ L D DF R L S + +V+
Sbjct: 33 ---------EAVICKRCFRLKHYNEIQDVS----LTDDDFI----RILNSIGQTQGLVVK 75
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
+VD DFDGS+ + + V + +V+LV K+DLLP S+ P +
Sbjct: 76 IVDIFDFDGSWLPGLHRFVGNN-----------------KVLLVGNKVDLLPKSVKPNKV 118
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+W++Q A+E G+ K + +SA K G+K L + D + +V+ +G N GKST
Sbjct: 119 INWMKQAAKELGL-KPEDVFLISADKGTGVKELAQAIEDYRDGK-DVYVVGCTNVGKSTF 176
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I + GEE I T + PGTTL ++ + L A LFDTPG+++ +
Sbjct: 177 INRIIREFS------GEEDVI----TTSQFPGTTLDMIDIP--LDNGASLFDTPGIINRH 224
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ + + E K+++ KE+KP+ +++ G ++ GL R D + S T + S
Sbjct: 225 QMAHFIDKTELKVISPKKEIKPKIFQLNEGQTLFFGGLARFDYVKGGRNSF--TCYVSND 282
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K ENA + ++H G LQPP G+ VE + V EF + DI +
Sbjct: 283 LYIHRTKLENADNVYKEHLGDLLQPP-GQDVVESFPELVAHEFTIK-----EEKTDIVFS 336
Query: 503 GLGWFSVRLKGEAALGVWTY--EGVDIVLRNALL 534
GLGW ++ E + V + +GV +++R +L+
Sbjct: 337 GLGWVTIN---EPGIKVVAHVPKGVGVMVRKSLI 367
>gi|90961476|ref|YP_535392.1| GTP-binding protein YqeH [Lactobacillus salivarius UCC118]
gi|301300328|ref|ZP_07206533.1| ribosome biogenesis GTPase YqeH [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|385840205|ref|YP_005863529.1| GTP-binding protein [Lactobacillus salivarius CECT 5713]
gi|90820670|gb|ABD99309.1| GTP-binding protein [Lactobacillus salivarius UCC118]
gi|300214326|gb|ADJ78742.1| GTP-binding protein [Lactobacillus salivarius CECT 5713]
gi|300852064|gb|EFK79743.1| ribosome biogenesis GTPase YqeH [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 373
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 144/459 (31%), Positives = 212/459 (46%), Gaps = 88/459 (19%)
Query: 76 EATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGL 135
E + ++ C GCG +Q NP GY ES ++KKG
Sbjct: 3 ETSNEILYCIGCGAKIQSENPNELGY-------------------TPES----AVKKG-- 37
Query: 136 VVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG 195
ET E+ C RC LRHY ++ DV+ L D DF R L
Sbjct: 38 ------LETEEL-------YCQRCFRLRHYNEIADVS----LTDDDF----LRLLNQIGE 76
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS 255
+ S+++ VVD DF+GS + + V GK+ V+LV K DLLP
Sbjct: 77 SDSLIVNVVDIFDFNGSVIPGLHRFV-------------GKND----VLLVGNKSDLLPK 119
Query: 256 SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQ 315
SL +R + W+RQ A + G+ I + SA K + + +L++ ++D K +V+ +G
Sbjct: 120 SLKRSRIKDWLRQEANKQGLRPI-DVALTSASKGYEIDNLLE-LIDKYRKGRDVYVVGVT 177
Query: 316 NAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDT 375
N GKSTL+N I K ++ I +T + PGTTL ++E L DT
Sbjct: 178 NVGKSTLINRIIK----------QQTGISELITTSRFPGTTLD--KIEIPFDDGKNLIDT 225
Query: 376 PGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYV 435
PG++H Q+ LT + K + KE+KP+ Y++ G +I + L R D S V
Sbjct: 226 PGIIHKQQMAHYLTGKSLKFASPQKEIKPKVYQLNEGQTIFLGSLARFDYISGGRTS--V 283
Query: 436 TVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSS 495
+ LPLH K +NA EKH G LQPP E+ ++++ K R EF VS S
Sbjct: 284 IAYFDNNLPLHRTKLQNADKFYEKHAGELLQPPTREE-LKKMPKLTRFEFKVSEKS---- 338
Query: 496 SVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
D+ +GLGW S L + W EGV +++R A++
Sbjct: 339 --DLVFSGLGWIS--LSPNTIVAGWAPEGVGVLIRKAMI 373
>gi|450131395|ref|ZP_21869464.1| GTP-binding protein YqeH [Streptococcus mutans NLML8]
gi|449153855|gb|EMB57487.1| GTP-binding protein YqeH [Streptococcus mutans NLML8]
Length = 368
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 206/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGY--TPKSALEK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ DV + D DF KL+ G +R++V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + +S + ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSVIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSGKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLMERAHEEGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTLG ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLG--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 228 QMAHYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLARADAFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + W EGV +V R AL+
Sbjct: 339 GLGW--IRINGRAKIAAWAPEGVAVVTRKALI 368
>gi|450121839|ref|ZP_21866478.1| GTP-binding protein YqeH [Streptococcus mutans ST6]
gi|449228725|gb|EMC28079.1| GTP-binding protein YqeH [Streptococcus mutans ST6]
Length = 368
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 206/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGY--TPKSALEK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ DV + D DF KL+ G +R++V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DFDGS + + +S ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFDGSVIPGLQRFISSN-----------------DLLLVGNKADILPKSVKSGKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLMERAHEEGLWPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 228 QMAHYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A T +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLAGADTFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + VW EGV +V R +L+
Sbjct: 339 GLGW--IRINGRAKIAVWAPEGVAVVTRKSLI 368
>gi|449915664|ref|ZP_21796411.1| GTP-binding protein YqeH [Streptococcus mutans 15JP3]
gi|449156142|gb|EMB59622.1| GTP-binding protein YqeH [Streptococcus mutans 15JP3]
Length = 368
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 206/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGY--TPKSALEK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDF-DFDHTVGRKLMSASGARSVVLM 202
+ C RC LRHY ++ DV + + DF F H VG ++++V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHISD--DDFLKFLHEVG-------DSKALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + +S + ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSIIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSGKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLMERAHEEGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 228 QMAHYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A T +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLAGADTFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + W EGV +V R AL+
Sbjct: 339 GLGW--IRINGRAKIAAWAPEGVAVVTRKALI 368
>gi|450092066|ref|ZP_21855759.1| GTP-binding protein YqeH [Streptococcus mutans W6]
gi|450150197|ref|ZP_21876491.1| GTP-binding protein YqeH [Streptococcus mutans 14D]
gi|449218759|gb|EMC18758.1| GTP-binding protein YqeH [Streptococcus mutans W6]
gi|449233832|gb|EMC32879.1| GTP-binding protein YqeH [Streptococcus mutans 14D]
Length = 368
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 206/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGY--TPKSALEK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ DV + D DF KL+ G +R++V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + +S + ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSVIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSGKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLMERAHEEGVRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 228 QMAHYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A T +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLAGADTFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + W EGV +V R AL+
Sbjct: 339 GLGW--IRINGRAKIAAWAPEGVAVVTRKALI 368
>gi|450006352|ref|ZP_21827181.1| GTP-binding protein YqeH [Streptococcus mutans NMT4863]
gi|449187647|gb|EMB89415.1| GTP-binding protein YqeH [Streptococcus mutans NMT4863]
Length = 368
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/382 (31%), Positives = 190/382 (49%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
+ C RC LRHY ++ DV + D DF KL+ G +R++V+ V+D DF+GS
Sbjct: 38 IYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + +S + ++LV K D+LP S+ + W+ +RA E
Sbjct: 89 VIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSGKITQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + L SA W +K LI + +L R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
+KNI+ T + PGTTL ++E L + +FDTPG++H +Q+ L+ +
Sbjct: 190 -------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRHQMAHYLSDKA 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 238 LKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDQQGF--TAYFDNNLKLHRTKLAG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A T +KH G L PP +K + K VR EF + D+ +GLGW +R+
Sbjct: 296 ADTFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFSGLGW--IRIN 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + W EGV +V R AL+
Sbjct: 347 GRAKIAAWAPEGVAVVTRKALI 368
>gi|365925269|ref|ZP_09448032.1| GTPase YqeH [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 372
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 141/452 (31%), Positives = 210/452 (46%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+Q +P GY P+ L K + E
Sbjct: 10 CIGCGSLIQSNDPDGLGYV--PASALKK-----------------------------QVE 38
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
T E+ C RC LRHY +V DV L D DF K+++ G ++++
Sbjct: 39 TKEL-------YCKRCFRLRHYNEVSDVN----LTDDDF-----LKILTQIGDTDALIVN 82
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF GS + + V G P +++V K DLLP SL T+
Sbjct: 83 VIDIFDFSGSIIPGIQRYV----------------GKNP-ILMVGNKEDLLPKSLKRTKL 125
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+RQ A G+ + + VSA KN G+ +L+ + R +V+ +G N GKSTL
Sbjct: 126 KDWIRQSANLVGL-RPADVALVSAGKNHGIATLLSLIEKYREGR-DVYVVGVTNVGKSTL 183
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K ++ I +T + PGTTL ++E L + L DTPG++H +
Sbjct: 184 INQIIK----------QQTGINELITTSRFPGTTLD--KIEIPLDDEHFLIDTPGIIHQH 231
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ +E + + KE+KPR Y++ AG ++ + GL R D + I V+
Sbjct: 232 QMAHFLSGKELNVASPQKEIKPRVYQLNAGQTLFLGGLARFDYITGEKDGI--VVYTDNN 289
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K ENA T+ EKH G LQPP E+ + +L K VR EF S D+ +
Sbjct: 290 LMLHRTKLENADTLYEKHVGELLQPP-SEETLTKLPKLVRFEFKTVQKS------DLVFS 342
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V A + W +GV + +R A++
Sbjct: 343 GLGWITV--SAGAVVAGWAPKGVSVTIRRAMI 372
>gi|449963594|ref|ZP_21810888.1| GTP-binding protein YqeH [Streptococcus mutans 15VF2]
gi|449173369|gb|EMB75946.1| GTP-binding protein YqeH [Streptococcus mutans 15VF2]
Length = 368
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 205/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGY--TPKSTLEK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ DV + D DF KL+ G +R++V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRTLVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + +S ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSVIPGLQRFISSN-----------------DLLLVGNKADILPKSVKSGKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLMERAHEEGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 228 QMAHYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A T +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLAGADTFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + W EGV +V R AL+
Sbjct: 339 GLGW--IRINGRAKIAAWAPEGVAVVTRKALI 368
>gi|418070903|ref|ZP_12708178.1| GTPase YqeH [Lactobacillus rhamnosus R0011]
gi|423078757|ref|ZP_17067434.1| ribosome biogenesis GTPase YqeH [Lactobacillus rhamnosus ATCC
21052]
gi|357540323|gb|EHJ24340.1| GTPase YqeH [Lactobacillus rhamnosus R0011]
gi|357549045|gb|EHJ30893.1| ribosome biogenesis GTPase YqeH [Lactobacillus rhamnosus ATCC
21052]
Length = 374
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 210/452 (46%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q T+PK PGY P+ L K EA+++
Sbjct: 12 CIGCGAILQTTDPKKPGYL--PAATLAKA--------------------------EADDD 43
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ VT L D DF +L++A G + ++++
Sbjct: 44 ----------IYCQRCFRLRHYNEIAPVT----LTDDDF-----LRLLNAIGESNALIVN 84
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + V D V+LV K D+LP SL+P +
Sbjct: 85 VIDIFDFNGSVIPGLHRFVGDNP-----------------VILVGNKADVLPKSLNPNKL 127
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
++W++Q+A+ G+ +T L SA K +G+ L+ + R +V+ +G N GKSTL
Sbjct: 128 KNWLQQQAKAQGLRPVTTL-LASAKKGFGVDELLTAIEKYREHR-DVYVVGVTNTGKSTL 185
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K + + +T + PGTTL R+ L L DTPG++H +
Sbjct: 186 INRIIKQL----------TGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRH 233
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ + ++ KLV+ +KP TY++ G +I + GL R D +S ++A
Sbjct: 234 QMAHFVGPKDLKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRQSF--VIYADTQ 291
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
LPLH K NA +KH G L PP ++ V + VR EF S D+ A
Sbjct: 292 LPLHRTKLINADEFYQKHVGGLLAPPQADE-VRDFPPLVRFEFTPKEKS------DLVFA 344
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V + + +GVD++LR A +
Sbjct: 345 GLGWITV--PSGVTIAGYAPKGVDVLLRKAFI 374
>gi|290579863|ref|YP_003484255.1| GTP-binding protein [Streptococcus mutans NN2025]
gi|449971650|ref|ZP_21814481.1| GTP-binding protein YqeH [Streptococcus mutans 2VS1]
gi|450029763|ref|ZP_21832865.1| GTP-binding protein YqeH [Streptococcus mutans G123]
gi|450057387|ref|ZP_21842554.1| GTP-binding protein YqeH [Streptococcus mutans NLML4]
gi|450163520|ref|ZP_21880832.1| GTP-binding protein YqeH [Streptococcus mutans B]
gi|254996762|dbj|BAH87363.1| putative GTP-binding protein [Streptococcus mutans NN2025]
gi|449171756|gb|EMB74404.1| GTP-binding protein YqeH [Streptococcus mutans 2VS1]
gi|449193955|gb|EMB95324.1| GTP-binding protein YqeH [Streptococcus mutans G123]
gi|449205315|gb|EMC06067.1| GTP-binding protein YqeH [Streptococcus mutans NLML4]
gi|449242684|gb|EMC41244.1| GTP-binding protein YqeH [Streptococcus mutans B]
Length = 368
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 206/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGY--TPKSALEK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ DV + D DF KL+ G +R++V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + +S + ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSVIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSGKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLMERAHEEGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 228 QMAHYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A T +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLAGADTFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + W EGV +V R AL+
Sbjct: 339 GLGW--IRINGRAKIAAWAPEGVAVVTRKALI 368
>gi|449919675|ref|ZP_21798074.1| GTP-binding protein YqeH [Streptococcus mutans 1SM1]
gi|449159247|gb|EMB62607.1| GTP-binding protein YqeH [Streptococcus mutans 1SM1]
Length = 368
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/382 (31%), Positives = 189/382 (49%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
+ C RC LRHY ++ DV + D DF KL+ G +R++V+ V+D DF+GS
Sbjct: 38 IYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + +S ++LV K D+LP S+ + W+ +RA E
Sbjct: 89 VIPGLQRFISSN-----------------DLLLVGNKADILPKSVKSGKITQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + L SA W +K LI + +L R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
+KNI+ T + PGTTL ++E L + +FDTPG++H +Q+ L+ +
Sbjct: 190 -------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRHQMAHYLSDKA 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 238 LKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKLAG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A T +KH G L PP +K + K VR EF + D+ +GLGW +R+
Sbjct: 296 ADTFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFSGLGW--IRIN 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + W EGV +V R AL+
Sbjct: 347 GRAKIAAWAPEGVTVVTRKALI 368
>gi|24380165|ref|NP_722120.1| GTPase YqeH [Streptococcus mutans UA159]
gi|449866835|ref|ZP_21779649.1| GTP-binding protein YqeH [Streptococcus mutans U2B]
gi|449869935|ref|ZP_21780374.1| GTP-binding protein YqeH [Streptococcus mutans 8ID3]
gi|449987024|ref|ZP_21820328.1| GTP-binding protein YqeH [Streptococcus mutans NFSM2]
gi|450081504|ref|ZP_21851769.1| GTP-binding protein YqeH [Streptococcus mutans N66]
gi|24378167|gb|AAN59426.1|AE015007_13 putative GTP-binding protein [Streptococcus mutans UA159]
gi|449157405|gb|EMB60847.1| GTP-binding protein YqeH [Streptococcus mutans 8ID3]
gi|449176868|gb|EMB79194.1| GTP-binding protein YqeH [Streptococcus mutans NFSM2]
gi|449215208|gb|EMC15419.1| GTP-binding protein YqeH [Streptococcus mutans N66]
gi|449263590|gb|EMC60960.1| GTP-binding protein YqeH [Streptococcus mutans U2B]
Length = 368
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 206/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGY--TPKSALEK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ DV + D DF KL+ G +R++V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRTLVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + +S + ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSVIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSGKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L +SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLMERAHEEGLRPL-DLILISAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLN--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 228 QMAHYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLAGADAFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + W EGV +V R AL+
Sbjct: 339 GLGW--IRINGRAKIAAWAPEGVAVVTRKALI 368
>gi|170287886|ref|YP_001738124.1| HSR1-like GTP-binding protein [Thermotoga sp. RQ2]
gi|170175389|gb|ACB08441.1| GTP-binding protein HSR1-related [Thermotoga sp. RQ2]
Length = 363
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 206/451 (45%), Gaps = 94/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
CPGCG +Q +PK PGY R + L++G
Sbjct: 3 CPGCGAAIQFDDPKKPGYIPREV-------------------YERRLEEG---------- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
K ++C RC ++HYGK++ V +FD +L S G VV+ V
Sbjct: 34 --------KEILCQRCFRMKHYGKLEPV---------EFDWDFKNQLKSYLGGFDVVVWV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+G++ + +++ EGK RVV + KIDLLP +++ +
Sbjct: 77 IDIFDFEGTYREDIVEIL------------EGK-----RVVYAINKIDLLPKAITVKEIK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
WV++R + + + VSA KN+GL SL+ + L K +G N GKS+LL
Sbjct: 120 EWVKKRIK---VKNTDDIRIVSAEKNFGLNSLVKYLSRLTDK---ALVVGVTNVGKSSLL 173
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I +N +S P PGTTLGI+R V A L+DTPG++ ++
Sbjct: 174 NKICT-----------HENTIS-----PFPGTTLGILR-RKVKEANLYLYDTPGIMTNDR 216
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
I L E QK V +EL +T++ G +I + GL R D+ + ++ +++S +
Sbjct: 217 ILDLLDPECQKRVLPREELSRKTFKPDNGRTIFMGGLCRFDIHFETEKNPIFLLFSSKEV 276
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
H K E A ++ G L PP + + E KW R+ F + ++A AG
Sbjct: 277 TFHETKRERADELMRNRLGDLLIPPCSKTKFENF-KWKRETFTLKEGE------ELAVAG 329
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW SVR +G + V + V +V+R AL+
Sbjct: 330 LGWMSVR-RGPFTVVVTVPDNVKLVVREALV 359
>gi|421768868|ref|ZP_16205578.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus rhamnosus LRHMDP2]
gi|421770979|ref|ZP_16207640.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus rhamnosus LRHMDP3]
gi|411185717|gb|EKS52844.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus rhamnosus LRHMDP2]
gi|411186414|gb|EKS53538.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus rhamnosus LRHMDP3]
Length = 374
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 210/452 (46%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q T+PK PGY P+ L K EA+++
Sbjct: 12 CIGCGAILQTTDPKKPGYL--PAATLAKA--------------------------EADDD 43
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ VT L D DF +L++A G + ++++
Sbjct: 44 ----------IYCQRCFRLRHYNEIAPVT----LTDDDF-----LRLLNAIGESNALIVN 84
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + V D V+LV K D+LP SL+P +
Sbjct: 85 VIDIFDFNGSVIPGLHRFVGDNP-----------------VILVGNKADVLPKSLNPNKL 127
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
++W++Q+A+ G+ +T L SA K +G+ L+ + R +V+ +G N GKSTL
Sbjct: 128 KNWLQQQAKAQGLRPVTTL-LASAKKGFGVDELLTAIEKYREHR-DVYVVGVTNTGKSTL 185
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K + + +T + PGTTL R+ L L DTPG++H +
Sbjct: 186 INRIIKQL----------IGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRH 233
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ + ++ KLV+ +KP TY++ G +I + GL R D +S ++A
Sbjct: 234 QMAHFVGPKDLKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRQSF--VIYADTQ 291
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
LPLH K NA +KH G L PP ++ V + VR EF S D+ A
Sbjct: 292 LPLHRTKLINADDFYQKHVGGLLAPPQADE-VRDFPPLVRFEFTPKEKS------DLVFA 344
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V + + +GVD++LR A +
Sbjct: 345 GLGWITV--PAGVTIAGYAPKGVDVLLRKAFI 374
>gi|387760687|ref|YP_006067664.1| ribosome biogenesis GTPase YqeH [Streptococcus salivarius 57.I]
gi|339291454|gb|AEJ52801.1| ribosome biogenesis GTPase YqeH [Streptococcus salivarius 57.I]
Length = 372
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/394 (32%), Positives = 199/394 (50%), Gaps = 52/394 (13%)
Query: 145 SEVKKHEKP--VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
S +KK E+ + C RC LRHY ++ DV + D + L + ++V+
Sbjct: 27 SSIKKAEETGELYCQRCFRLRHYNEIVDVHIT--------DDEFLKLLHEVGDSDALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS +++ VS GN V+LV K D+LP S+ +
Sbjct: 79 VVDIFDFNGSIIPGLSRFVS---------------GN--DVLLVGNKKDILPKSVKDGKV 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + + SA + +K LI + L R +V+ +G N GKSTL
Sbjct: 122 TQWLTERAHEEGMRPVDVM-LTSAQNHHAIKELIQRIEKLRKGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI K + +K+++ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIKEITG-------DKDVI---TTSRFPGTTLD--KIEIPLDDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ ++ K V+ KE+KP+TY++ AG ++ + GL R D + + + T +
Sbjct: 228 QMAHYLSAKDLKYVSPKKEIKPKTYQLNAGQTLFLGGLGRFDFIDGNKQGF--TAFFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K E A +KH G L PP G K + + K VR EF V + DI +
Sbjct: 286 LKLHRTKLEGADAFYDKHVGSLLMPP-GPKDLADFPKLVRHEFTVKDKT------DIVFS 338
Query: 503 GLGWFSVRLKGE--AALGVWTYEGVDIVLRNALL 534
GLGW V+ K E + W EGV +V+R A++
Sbjct: 339 GLGWIRVQGKAEQPTIVAAWAPEGVGVVVRKAII 372
>gi|397650376|ref|YP_006490903.1| GTPase YqeH [Streptococcus mutans GS-5]
gi|449893715|ref|ZP_21788892.1| GTP-binding protein YqeH [Streptococcus mutans SF12]
gi|450098940|ref|ZP_21858241.1| GTP-binding protein YqeH [Streptococcus mutans SF1]
gi|392603945|gb|AFM82109.1| GTPase YqeH [Streptococcus mutans GS-5]
gi|449221126|gb|EMC20928.1| GTP-binding protein YqeH [Streptococcus mutans SF1]
gi|449255714|gb|EMC53558.1| GTP-binding protein YqeH [Streptococcus mutans SF12]
Length = 368
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 206/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGY--TPKSALEK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ DV + D DF KL+ G +R++V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRTLVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + +S + ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSVIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSGKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L +SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLMERAHEEGLRPL-DLILISAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 228 QMAHYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLAGADAFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + W EGV +V R AL+
Sbjct: 339 GLGW--IRINGRAKIAAWAPEGVAVVTRKALI 368
>gi|449883956|ref|ZP_21785426.1| GTP-binding protein YqeH [Streptococcus mutans SA38]
gi|449249416|gb|EMC47546.1| GTP-binding protein YqeH [Streptococcus mutans SA38]
Length = 368
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/382 (31%), Positives = 189/382 (49%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
+ C RC LRHY ++ DV + D DF KL+ G +R++V+ V+D DF+GS
Sbjct: 38 IYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRTLVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + +S ++LV K D+LP S+ + W+ +RA E
Sbjct: 89 VIPGLQRFISSN-----------------DLLLVGNKADILPKSVKSGKITQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + L SA W +K LI + +L R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
+KNI+ T + PGTTL ++E L + +FDTPG++H +Q+ L+ +
Sbjct: 190 -------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRHQMAHYLSDKA 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 238 LKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKLAG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A T +KH G L PP +K + K VR EF + D+ +GLGW +R+
Sbjct: 296 ADTFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFSGLGW--IRIN 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + W EGV +V R AL+
Sbjct: 347 GRAKIAAWAPEGVAVVTRKALI 368
>gi|15643611|ref|NP_228657.1| hypothetical protein TM0848 [Thermotoga maritima MSB8]
gi|403252589|ref|ZP_10918898.1| hypothetical protein EMP_02399 [Thermotoga sp. EMP]
gi|418044982|ref|ZP_12683078.1| ribosome biogenesis GTPase YqeH [Thermotoga maritima MSB8]
gi|4981381|gb|AAD35930.1|AE001751_10 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351678064|gb|EHA61211.1| ribosome biogenesis GTPase YqeH [Thermotoga maritima MSB8]
gi|402812079|gb|EJX26559.1| hypothetical protein EMP_02399 [Thermotoga sp. EMP]
Length = 363
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 207/451 (45%), Gaps = 94/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
CPGCG +Q +PK PGY R F L++G
Sbjct: 3 CPGCGAAIQFDDPKKPGYIPREV-------------------FEKRLEEG---------- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
K ++C RC ++HYGK++ V +FD +L S G VV+ V
Sbjct: 34 --------KEILCQRCFRMKHYGKLEPV---------EFDWDFKNQLKSYLGGFDVVVWV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+G++ +A+++ +GK RV+ V+ KIDLLP +++ +
Sbjct: 77 IDIFDFEGTYREDIAEIL------------KGK-----RVIYVINKIDLLPRAVTVKEIK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
WV++R + I VSA KN+GL SL+ + L K +G N GKS+LL
Sbjct: 120 EWVKKRIKTKNTDDI---RIVSAEKNFGLTSLVKYLSRLTDK---ALVVGVTNVGKSSLL 173
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I +N +S P PGTTLGI++ V A L+DTPG++ ++
Sbjct: 174 NKICT-----------HENTIS-----PFPGTTLGILK-RKVKEANLYLYDTPGIMTSDR 216
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
I L E QK V +EL +T++ G +I + GL R D+ + ++ +++S +
Sbjct: 217 ILDLLDPECQKRVLPREELSRKTFKPDNGRTIFMGGLCRFDIHFETEKNPIFLLFSSKEV 276
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
H + E A ++ G L PP + + E KW R+ F + ++A AG
Sbjct: 277 TFHETRRERADELMRNRLGDLLIPPCSKTKFENF-KWKRETFTLKEGE------ELAVAG 329
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW SVR +G + V + V +V+R AL+
Sbjct: 330 LGWMSVR-RGPFTVEVTVPDSVKLVVREALV 359
>gi|440803475|gb|ELR24376.1| ribosome biogenesis GTPase YqeH, putative [Acanthamoeba castellanii
str. Neff]
Length = 578
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 137/476 (28%), Positives = 216/476 (45%), Gaps = 93/476 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
CPGCG +Q +P GY +P Q L + + GL
Sbjct: 11 CPGCGATLQSDDPHSIGY--KPPQVLKQEER-------------------GLAP------ 43
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
VC RCH+LRH+G V + V V L S +V+ +
Sbjct: 44 -----------VCQRCHSLRHHGIVTPLKVPY--------EEVKEHLKLISDQSCLVVKI 84
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF GSF ++D G +GN P VVLV K+DLLP P R +
Sbjct: 85 VDIFDFSGSF-------INDF---------RGITGNNP-VVLVGNKLDLLPVGAKPERIQ 127
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+++ A E G+ + +H +SA G+ SL + L +R +V+ +G N GKSTL+
Sbjct: 128 IWLKRLATEMGLKNVRSVHLISAKSGEGVHSLSRKIEQLRKER-DVYVVGCTNVGKSTLI 186
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAP----------VPGTTLGIV------RVEGVLP 367
N + S++ G ++ H+ + P VPGTTL ++ + +
Sbjct: 187 NRLI-SINT----KGTYNSLTVHIVQGPKKRNLITTSIVPGTTLNLISFPLGGKKAFKMG 241
Query: 368 AQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEE 427
+A L+DTPG+++ +Q+ L EE + + ++P TYR+ G ++ GL R+D +
Sbjct: 242 KRAFLYDTPGVINKHQMANLLNMEELSITLPKRRIQPVTYRLVPGKALFFGGLGRLDYVD 301
Query: 428 SSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHV 487
+Y+T++ S L +H A ++ KH G L PP+GE+R ++L +++ K+ H+
Sbjct: 302 GP-GPLYLTLFLSKELKVHPTSIAKADDVMSKHAGTLLVPPLGEERAKQLPEFIAKDIHI 360
Query: 488 SG----SSWDSSSVDIAAAGLGWFSV---RLKGEAALGVWTYEGVDIVLRNALLPY 536
S DI +GLGW S+ + L + EGV I LR L+P+
Sbjct: 361 EADEERGGLKKSFADIVFSGLGWTSLVTPTFDRDIHLRSLSPEGVGIFLREPLMPF 416
>gi|420143153|ref|ZP_14650656.1| GTP-binding protein [Lactococcus garvieae IPLA 31405]
gi|391856958|gb|EIT67492.1| GTP-binding protein [Lactococcus garvieae IPLA 31405]
Length = 368
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 129/389 (33%), Positives = 200/389 (51%), Gaps = 54/389 (13%)
Query: 148 KKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLMVVDA 206
+ + + C RC LRHY ++ DV+ L D DF +L+S G ++++ VVD
Sbjct: 32 RGEDDALYCQRCFRLRHYNEIADVS----LTDDDF-----LRLLSEIGEHDALIVNVVDI 82
Query: 207 ADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWV 266
DF+GS + + +GN ++LV K D+LP SL + W+
Sbjct: 83 FDFNGSLIPSLHRF----------------TGN-NDLLLVANKKDILPHSLKVGKMSAWL 125
Query: 267 RQRAREDGISKITKLHFVSAVKNWG-LKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNA 325
+++A+ G+ + L V++ KN ++ L++ + + R +V+ +G N GKSTL+NA
Sbjct: 126 KEQAKRAGLRPLDVL--VTSAKNQDDVRELMEKIEKMRKGR-DVYVVGVTNVGKSTLINA 182
Query: 326 IAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQIT 385
I K V + N++ T + PGTTL ++E L + L DTPG++H Q+
Sbjct: 183 IIKLVTG-------DDNVI---TTSRFPGTTLD--KIEIPLDDDSLLIDTPGIIHRGQMA 230
Query: 386 TRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPL 445
L ++ KLV+ KE+KP+TY++ AG ++ + GL R D + + + TV+ L +
Sbjct: 231 HYLEAKDLKLVSPKKEIKPKTYQLNAGQTLFLGGLARFDYIQGEKQGL--TVFCDNELDI 288
Query: 446 HMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLG 505
H K E A EKH G LQPP K + + K +RKEF V S DI +GLG
Sbjct: 289 HRTKLEGATEFYEKHAGGLLQPPRA-KNLSDFPKLIRKEFSVKEKS------DIVFSGLG 341
Query: 506 WFSVRLKGEAALGVWTYEGVDIVLRNALL 534
W V +G A W EGVD+VLR AL+
Sbjct: 342 WIRVAERGVVA--AWVPEGVDVVLRKALV 368
>gi|199597217|ref|ZP_03210649.1| Predicted GTPase [Lactobacillus rhamnosus HN001]
gi|258508733|ref|YP_003171484.1| GTP-binding protein YqeH [Lactobacillus rhamnosus GG]
gi|385828394|ref|YP_005866166.1| GTP-binding protein [Lactobacillus rhamnosus GG]
gi|199592021|gb|EDZ00096.1| Predicted GTPase [Lactobacillus rhamnosus HN001]
gi|257148660|emb|CAR87633.1| GTP-binding protein [Lactobacillus rhamnosus GG]
gi|259650039|dbj|BAI42201.1| GTP-binding protein [Lactobacillus rhamnosus GG]
Length = 374
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 210/452 (46%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q T+PK PGY P+ L K EA+++
Sbjct: 12 CIGCGAILQTTDPKKPGYL--PAATLAKA--------------------------EADDD 43
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ VT L D DF +L++A G + ++++
Sbjct: 44 ----------IYCQRCFRLRHYNEIAPVT----LTDDDF-----LRLLNAIGESNALIVN 84
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + V D V+LV K D+LP SL+P +
Sbjct: 85 VIDIFDFNGSVIPGLHRFVGDNP-----------------VILVGNKADVLPKSLNPNKL 127
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
++W++Q+A+ G+ +T L SA K +G+ L+ + R +V+ +G N GKSTL
Sbjct: 128 KNWLQQQAKAQGLRPVTTL-LASAKKGFGVDELLTAIEKYREHR-DVYVVGVTNTGKSTL 185
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K + + +T + PGTTL R+ L L DTPG++H +
Sbjct: 186 INRIIKQL----------TGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRH 233
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ + ++ KLV+ +KP TY++ G +I + GL R D +S ++A
Sbjct: 234 QMAHFVGPKDLKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRQSF--VIYADTQ 291
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
LPLH K NA ++H G L PP ++ V + VR EF S D+ A
Sbjct: 292 LPLHRTKLINADEFYQRHVGGLLAPPQADE-VRDFPPLVRFEFTPKEKS------DLVFA 344
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V + + +GVD++LR A +
Sbjct: 345 GLGWITV--PAGVTIAGYAPKGVDVLLRKAFI 374
>gi|310643106|ref|YP_003947864.1| ribosome biogenesis GTPase yqeh [Paenibacillus polymyxa SC2]
gi|309248056|gb|ADO57623.1| Ribosome biogenesis GTPase YqeH [Paenibacillus polymyxa SC2]
gi|392303906|emb|CCI70269.1| GTP-binding protein engA [Paenibacillus polymyxa M1]
Length = 375
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 210/452 (46%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG++MQ T P PGY P + L +
Sbjct: 13 CSGCGIVMQTTGPDLPGYI--PEKLLTR-------------------------------- 38
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
+PV+C RC +++Y + VTV D KL+S G + ++V+
Sbjct: 39 --------EPVICQRCFRIKNYNETSSVTV---------DQDEFLKLLSQIGDKDALVIH 81
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
+VD DF+GS + + V G+ P VVL V K DLLP + +
Sbjct: 82 IVDIFDFEGSLISGLQRFV----------------GSNP-VVLAVNKTDLLPKVTNWNKV 124
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+WV+++A+E G+ + ++ SA KN G L+D V +L G R +V+ +GA N GKSTL
Sbjct: 125 RNWVQKQAKEQGL-RTEEIVLCSAKKNQGFDRLLDVVSELRGNR-DVYVVGATNVGKSTL 182
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N + + + ++ LT + PGTTL +V + L + DTPG+++P
Sbjct: 183 INRLIR----------DYSDMEQELTTSRYPGTTLDMVNIP--LDDGKHIIDTPGIVYPW 230
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
+ + ++R++ + +K LKP Y++ AG ++ G+ R D + +S T + +
Sbjct: 231 RFSEIVSRQDLSAIMPDKPLKPAAYQLDAGQTLFFGGMARFDFVDGQHQSF--TCYINGG 288
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K E A + H G L PP ++ + E+ +W R EF V S DI +
Sbjct: 289 LKIHRTKLERADQLFADHAGELLSPPTRDQ-LAEMPEWTRHEFRVP----RKSPSDIYIS 343
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW V + A + V GV ++LR AL+
Sbjct: 344 GLGWIRVNSENGALVAVHAPRGVRVLLRPALI 375
>gi|449932299|ref|ZP_21802790.1| GTP-binding protein YqeH [Streptococcus mutans 3SN1]
gi|449161478|gb|EMB64664.1| GTP-binding protein YqeH [Streptococcus mutans 3SN1]
Length = 368
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 206/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGY--TPKSALEK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDF-DFDHTVGRKLMSASGARSVVLM 202
+ C RC LRHY ++ DV + + DF F H VG ++++V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHISD--DDFLKFLHEVG-------DSKALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + +S + ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSIIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSGKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLMERAHEEGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 228 QMAHYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A T +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLAGADTFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + W EGV +V R +L+
Sbjct: 339 GLGW--IRINGRAKIAAWAPEGVAVVTRKSLI 368
>gi|450000106|ref|ZP_21824925.1| GTP-binding protein YqeH [Streptococcus mutans N29]
gi|449186162|gb|EMB88005.1| GTP-binding protein YqeH [Streptococcus mutans N29]
Length = 368
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 205/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGY--TPKSALEK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ DV + D DF KL+ G +R++V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + +S + ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSVIPGLQSFISSS-----------------DLLLVGNKADILPKSVKSGKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLMERAHEEGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 228 QMAHYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A T +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLAGADTFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + W EGV +V R AL+
Sbjct: 339 GLGW--IRINGRAKIAAWAPEGVAVVTRKALI 368
>gi|387784745|ref|YP_006070828.1| putative GTP binding protein [Streptococcus salivarius JIM8777]
gi|338745627|emb|CCB95993.1| putative GTP binding protein [Streptococcus salivarius JIM8777]
Length = 372
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 198/394 (50%), Gaps = 52/394 (13%)
Query: 145 SEVKKHEKP--VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
S +KK E+ + C RC LRHY ++ DV + D + L + ++V+
Sbjct: 27 SSIKKAEETGELYCQRCFRLRHYNEIVDVHIT--------DDEFLKLLHEVGDSDALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS +++ VS GN V+LV K D+LP S+ +
Sbjct: 79 VVDIFDFNGSIIPGLSRFVS---------------GN--DVLLVGNKKDILPKSVKDGKV 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + + SA + +K LI + L R +V+ +G N GKSTL
Sbjct: 122 TQWLTERAHEEGMRPVDVM-LTSAQNHHAIKELIQRIEKLRKGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI K + +K+I+ T + PGTTL ++E L +FDTPG++H +
Sbjct: 180 INAIIKEITG-------DKDII---TTSRFPGTTLD--KIEIPLDDGTYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ ++ K V+ KE+KP+TY++ AG ++ + GL R D + + + T +
Sbjct: 228 QMAHYLSAKDLKYVSPKKEIKPKTYQLNAGQTLFLGGLGRFDFIDGNKQGF--TAFFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K E A +KH G L PP G K + + K VR EF V + DI +
Sbjct: 286 LKLHRTKLEGADAFYDKHVGSLLVPP-GPKDLADFPKLVRHEFTVKDKT------DIVFS 338
Query: 503 GLGWFSVRLKGE--AALGVWTYEGVDIVLRNALL 534
GLGW V+ K E + W EGV +V+R A++
Sbjct: 339 GLGWIRVQGKAEQPTIVAAWAPEGVGVVVRKAII 372
>gi|228477071|ref|ZP_04061709.1| ribosome biogenesis GTPase YqeH [Streptococcus salivarius SK126]
gi|228251090|gb|EEK10261.1| ribosome biogenesis GTPase YqeH [Streptococcus salivarius SK126]
Length = 372
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 128/396 (32%), Positives = 201/396 (50%), Gaps = 56/396 (14%)
Query: 145 SEVKKHEKP--VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
S +KK E+ + C RC LRHY ++ DV + D + L + ++V+
Sbjct: 27 SSIKKAEETGELYCQRCFRLRHYNEIVDVHIT--------DDEFLKLLHEVGDSDALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS +++ VS GN V+LV K D+LP S+ +
Sbjct: 79 VVDIFDFNGSIIPGLSRFVS---------------GN--DVLLVGNKKDILPKSVKDGKV 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + + SA + +K LI + L R +V+ +G N GKSTL
Sbjct: 122 TQWLTERAHEEGMRPVDVM-LTSAQNHHAIKELIQRIEKLRKSR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI K + +K+I+ T + PGTTL ++E L +FDTPG++H +
Sbjct: 180 INAIIKEITG-------DKDII---TTSRFPGTTLD--KIEIPLDDGTYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ ++ K V+ KE+KP+TY++ AG ++ + GL R D + + + T +
Sbjct: 228 QMAHYLSAKDLKYVSPKKEIKPKTYQLNAGQTLFLGGLGRFDFIDGNKQGF--TAFFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K E A +KH G L PP G K + + K VR EF V + DI +
Sbjct: 286 LKLHRTKLEGADAFYDKHVGSLLMPP-GPKDLADFPKLVRHEFTVKDKT------DIVFS 338
Query: 503 GLGWFSVRLKGEA----ALGVWTYEGVDIVLRNALL 534
GLGW +R++G+A + W EGV +V+R A++
Sbjct: 339 GLGW--IRVQGKADQPTIVAAWAPEGVGVVVRKAII 372
>gi|449876633|ref|ZP_21782890.1| GTP-binding protein YqeH [Streptococcus mutans S1B]
gi|449252026|gb|EMC50018.1| GTP-binding protein YqeH [Streptococcus mutans S1B]
Length = 368
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 205/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGY--TPKSALGK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ DV + D DF KL+ G +R++V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + +S ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSVISGLQRFISSN-----------------DLLLVGNKADILPKSVKSGKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLMERAHEEGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 228 QMAHYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A T +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLAGADTFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + W EGV +V R +L+
Sbjct: 339 GLGW--IRINGRAKIAAWAPEGVAVVTRKSLI 368
>gi|352517436|ref|YP_004886753.1| putative GTP-binding protein [Tetragenococcus halophilus NBRC
12172]
gi|348601543|dbj|BAK94589.1| putative GTP-binding protein [Tetragenococcus halophilus NBRC
12172]
Length = 369
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 193/382 (50%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLMVVDAADFDGS 212
V C RC LRHY +++DV+ L D DF +L++ G + ++++ VVD DF+GS
Sbjct: 39 VYCQRCFRLRHYNEIQDVS----LTDDDF-----LRLLNEIGQKDALIVNVVDIFDFNGS 89
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + V D V+LV K+D+LP SL T+ + W++++A +
Sbjct: 90 IIPGLHRFVGDNP-----------------VLLVGNKVDVLPKSLKKTKLKQWMKEQAHD 132
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + L SA +N L +L+D + R +V+ +G N GKSTL+N I +
Sbjct: 133 KGLRPVDVL-LTSAKRNDELDALLDMIEKYREGR-DVYIVGVTNVGKSTLINQIVQKT-- 188
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
++ +T + PGTTL ++E L L DTPG++H +Q+ L ++
Sbjct: 189 --------ADVKELITTSKFPGTTLD--KIEIPLEDGQFLIDTPGIIHRHQMAHFLGEKD 238
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K++ KE+KP+ Y++ AG ++ + GL R D + S TV+ S L +H K EN
Sbjct: 239 LKIIAPQKEIKPKIYQLNAGQTLFLGGLARFDFVKGEKSSF--TVFVSNDLMIHRTKLEN 296
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A EKH G LQPP +++ E + R EF + DI AGLGW +V K
Sbjct: 297 ADKFYEKHLGELLQPPRNDEK-EHFPELERFEFSI------KEKTDIVFAGLGWVTV--K 347
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
+ W +GVD++ R AL+
Sbjct: 348 DPVVVSGWAPKGVDVITRQALV 369
>gi|450061597|ref|ZP_21843908.1| GTP-binding protein YqeH [Streptococcus mutans NLML5]
gi|449207028|gb|EMC07711.1| GTP-binding protein YqeH [Streptococcus mutans NLML5]
Length = 368
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 205/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGY--TPKSALEK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ DV + D DF KL+ G +R++V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + +S + ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSVIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSGKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLMERAHEEGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 228 QMAYYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLARADAFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + W EGV +V R AL+
Sbjct: 339 GLGW--IRINGRAKIAAWAPEGVAVVTRKALI 368
>gi|256616683|ref|ZP_05473529.1| nitric-oxide synthase [Enterococcus faecalis ATCC 4200]
gi|256596210|gb|EEU15386.1| nitric-oxide synthase [Enterococcus faecalis ATCC 4200]
Length = 375
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 137/452 (30%), Positives = 204/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q NP GY + + FE E
Sbjct: 13 CIGCGAIIQTENPHELGYTPKTA-------------------------------FEKGME 41
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
T EV C RC LRHY ++DV L D DF +L++ G ++++
Sbjct: 42 TGEV-------YCQRCFRLRHYNDIQDVQ----LTDDDF-----LRLLNGLGTEDALIVN 85
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + + D V+LV K+D+LP SL T+
Sbjct: 86 VVDIFDFNGSLIPGLHRFIGDNP-----------------VLLVGNKVDILPKSLKKTKM 128
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R+RA E G+ + L S K ++ L+D + R +V+ +G N GKSTL
Sbjct: 129 VQWMRERAHEAGLRPVDVL-LTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKSTL 186
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I + + + +T + PGTTL ++E L L DTPG++H +
Sbjct: 187 INQIIQ----------QTVGVQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 234
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ K++ KE+KP+ Y++ A ++ + GL R D + + S + S
Sbjct: 235 QMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSND 292
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH KT A EKH G LQPP ++ V E + VR EF V DI A
Sbjct: 293 LKLHRTKTATADAFYEKHVGGLLQPPRADE-VAEFPELVRFEFSV------KEKTDIVFA 345
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V G A W +GVD++ R AL+
Sbjct: 346 GLGWITVTEPGVVA--GWAPKGVDVLRRKALI 375
>gi|450125814|ref|ZP_21867843.1| GTP-binding protein YqeH [Streptococcus mutans U2A]
gi|449232058|gb|EMC31197.1| GTP-binding protein YqeH [Streptococcus mutans U2A]
Length = 368
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 189/382 (49%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
+ C RC LRHY ++ DV + D DF KL+ G +R++V+ V+D DF+GS
Sbjct: 38 IYCQRCFRLRHYNEITDVYIS----DDDF-----LKLLHEVGDSRALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + +S + ++LV K D+LP S+ + W+ +RA E
Sbjct: 89 VIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSGKITQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + L SA W +K LI + +L R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
+KNI+ T + PGTTL ++E L + +FDTPG++H +Q+ L+ +
Sbjct: 190 -------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRHQMAHYLSDKA 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 238 LKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDQQGF--TAYFDNNLKLHRTKLAG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP +K + K VR EF + D+ +GLGW +R+
Sbjct: 296 ADAFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFSGLGW--IRIN 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + W EGV +V R AL+
Sbjct: 347 GRAKIAAWAPEGVAVVTRKALI 368
>gi|347522463|ref|YP_004780034.1| GTP-binding protein [Lactococcus garvieae ATCC 49156]
gi|385833847|ref|YP_005871622.1| GTP-binding protein [Lactococcus garvieae Lg2]
gi|343181031|dbj|BAK59370.1| GTP-binding protein [Lactococcus garvieae ATCC 49156]
gi|343183000|dbj|BAK61338.1| GTP-binding protein [Lactococcus garvieae Lg2]
Length = 368
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 128/389 (32%), Positives = 200/389 (51%), Gaps = 54/389 (13%)
Query: 148 KKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLMVVDA 206
+ + + C RC LRHY ++ DV+ L D DF +L+S G ++++ VVD
Sbjct: 32 RGEDDALYCQRCFRLRHYNEIADVS----LTDDDF-----LRLLSEIGEHDALIVNVVDI 82
Query: 207 ADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWV 266
DF+GS + + +GN ++LV K D+LP SL + W+
Sbjct: 83 FDFNGSLIPSLHRF----------------TGN-NDLLLVANKKDILPHSLKVGKMSAWL 125
Query: 267 RQRAREDGISKITKLHFVSAVKNWG-LKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNA 325
+++A+ G+ + L V++ KN ++ L++ + + R +V+ +G N GKSTL+NA
Sbjct: 126 KEQAKRAGLRPLDVL--VTSAKNQDDVRELMEKIEKMRKGR-DVYVVGVTNVGKSTLINA 182
Query: 326 IAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQIT 385
I K V + N++ T + PGTTL ++E L + L DTPG++H Q+
Sbjct: 183 IIKLVTG-------DDNVI---TTSRFPGTTLD--KIEIPLDDDSLLIDTPGIIHRGQMA 230
Query: 386 TRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPL 445
L ++ KLV+ KE+KP+TY++ AG ++ + GL R D + + + TV+ L +
Sbjct: 231 HYLEAKDLKLVSPKKEIKPKTYQLNAGQTLFLGGLARFDYIQGEKQGL--TVFCDNELDI 288
Query: 446 HMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLG 505
H K E A EKH G LQPP K + + K +RKEF V S DI +GLG
Sbjct: 289 HRTKLEGATEFYEKHAGGLLQPPRA-KNLSDFPKLIRKEFSVKEKS------DIVFSGLG 341
Query: 506 WFSVRLKGEAALGVWTYEGVDIVLRNALL 534
W V +G + W EGVD+VLR AL+
Sbjct: 342 WIRVAERG--VVTAWVPEGVDVVLRKALV 368
>gi|422719674|ref|ZP_16776305.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0017]
gi|315033123|gb|EFT45055.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0017]
Length = 369
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 137/452 (30%), Positives = 204/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q NP GY + + FE E
Sbjct: 7 CIGCGAIIQTENPHELGYTPKTA-------------------------------FEKGME 35
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
T EV C RC LRHY ++DV L D DF +L++ G ++++
Sbjct: 36 TGEV-------YCQRCFRLRHYNDIQDVQ----LTDDDF-----LRLLNGLGTEDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + + D V+LV K+D+LP SL T+
Sbjct: 80 VVDIFDFNGSLIPGLHRFIGDNP-----------------VLLVGNKVDILPKSLKKTKM 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R+RA E G+ + L S K ++ L+D + R +V+ +G N GKSTL
Sbjct: 123 VQWMRERAHEAGLRPVDVL-LTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I + + + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIQ----------QTVGVQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ K++ KE+KP+ Y++ A ++ + GL R D + + S + S
Sbjct: 229 QMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH KT A EKH G LQPP ++ V E + VR EF V DI A
Sbjct: 287 LKLHRTKTATADAFYEKHVGGLLQPPRADE-VAEFPELVRFEFSV------KEKTDIVFA 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V G A W +GVD++ R AL+
Sbjct: 340 GLGWITVTEPGVVA--GWAPKGVDVLRRKALI 369
>gi|387785525|ref|YP_006250621.1| putative GTP-binding protein [Streptococcus mutans LJ23]
gi|450169919|ref|ZP_21883266.1| GTP-binding protein YqeH [Streptococcus mutans SM4]
gi|379131926|dbj|BAL68678.1| putative GTP-binding protein [Streptococcus mutans LJ23]
gi|449246500|gb|EMC44803.1| GTP-binding protein YqeH [Streptococcus mutans SM4]
Length = 368
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 205/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGY--TPKSALEK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ DV + D DF KL+ G +R++V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + +S + ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSVIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSGKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLMERAHEEGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 228 QMAHYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDQQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLAGADAFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + W EGV +V R AL+
Sbjct: 339 GLGW--IRINGRAKIAAWAPEGVAVVTRKALI 368
>gi|449897616|ref|ZP_21790107.1| GTP-binding protein YqeH [Streptococcus mutans R221]
gi|449261150|gb|EMC58634.1| GTP-binding protein YqeH [Streptococcus mutans R221]
Length = 368
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 206/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGY--TPKSALEK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ DV + D DF KL+ G +R++V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + +S + ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSVIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSGKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLMERAHEEGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + + T +
Sbjct: 228 QMAHYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGNKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLAGADAFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + W EGV +V R AL+
Sbjct: 339 GLGW--IRINGRAKIAAWAPEGVAVVTRKALI 368
>gi|281411522|ref|YP_003345601.1| ribosome biogenesis GTPase YqeH [Thermotoga naphthophila RKU-10]
gi|281372625|gb|ADA66187.1| ribosome biogenesis GTPase YqeH [Thermotoga naphthophila RKU-10]
Length = 363
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 207/451 (45%), Gaps = 94/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
CPGCG +Q +PK PGY R + L++G
Sbjct: 3 CPGCGAAIQFDDPKKPGYIPREV-------------------YERRLEEG---------- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
K ++C RC ++HYGK++ V +F+ +L S G VV+ V
Sbjct: 34 --------KEILCQRCFRMKHYGKLEPV---------EFNWDFKNQLKSYLGGFDVVVWV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+G++ +A+++ +GK RV+ V+ KIDLLP +++ +
Sbjct: 77 IDIFDFEGTYREDIAEIL------------KGK-----RVIYVINKIDLLPRAVTVKEIK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
WV++R + I VSA KN+GL SL+ + L K +G N GKS+LL
Sbjct: 120 EWVKKRIKTKNTDDI---RIVSAEKNFGLTSLVKYLSRLTDK---ALVVGVTNVGKSSLL 173
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I +N +S P PGTTLGI+R V A L+DTPG++ ++
Sbjct: 174 NKICT-----------HENTIS-----PFPGTTLGILR-RKVKEANLYLYDTPGIMTNDR 216
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
I L E QK V +EL +T++ G +I + GL R D+ + ++ +++S +
Sbjct: 217 ILDLLDPECQKRVLPREELSRKTFKPDNGRTIFMGGLCRFDIHFETEKNPIFLLFSSKEV 276
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
H K E A ++ G L PP + + E KW R+ F + ++A AG
Sbjct: 277 TFHETKRERADELMRNRLGDLLIPPCSKTKFENF-KWKRETFTLKEGE------ELAVAG 329
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW SVR +G + V + V +V+R AL+
Sbjct: 330 LGWMSVR-RGPFTVEVTVPDSVKLVVREALV 359
>gi|449982204|ref|ZP_21818184.1| GTP-binding protein YqeH [Streptococcus mutans 5SM3]
gi|450036899|ref|ZP_21835667.1| GTP-binding protein YqeH [Streptococcus mutans M21]
gi|450107703|ref|ZP_21861140.1| GTP-binding protein YqeH [Streptococcus mutans SF14]
gi|450110540|ref|ZP_21862154.1| GTP-binding protein YqeH [Streptococcus mutans SM6]
gi|450160189|ref|ZP_21879859.1| GTP-binding protein YqeH [Streptococcus mutans 66-2A]
gi|449175079|gb|EMB77524.1| GTP-binding protein YqeH [Streptococcus mutans 5SM3]
gi|449193095|gb|EMB94490.1| GTP-binding protein YqeH [Streptococcus mutans M21]
gi|449221545|gb|EMC21314.1| GTP-binding protein YqeH [Streptococcus mutans SF14]
gi|449225021|gb|EMC24640.1| GTP-binding protein YqeH [Streptococcus mutans SM6]
gi|449240379|gb|EMC39058.1| GTP-binding protein YqeH [Streptococcus mutans 66-2A]
Length = 368
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 205/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGY--TPKSALEK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ DV + D DF KL+ G +R++V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + +S + ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSVIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSGKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLMERAHEEGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 228 QMAHYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLAGADAFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + W EGV +V R AL+
Sbjct: 339 GLGW--IRINGRAKIAAWAPEGVAVVTRKALI 368
>gi|450010364|ref|ZP_21828633.1| GTP-binding protein YqeH [Streptococcus mutans A19]
gi|450023323|ref|ZP_21830536.1| GTP-binding protein YqeH [Streptococcus mutans U138]
gi|450116249|ref|ZP_21864385.1| GTP-binding protein YqeH [Streptococcus mutans ST1]
gi|449190218|gb|EMB91807.1| GTP-binding protein YqeH [Streptococcus mutans A19]
gi|449193636|gb|EMB95015.1| GTP-binding protein YqeH [Streptococcus mutans U138]
gi|449227139|gb|EMC26583.1| GTP-binding protein YqeH [Streptococcus mutans ST1]
Length = 368
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 205/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGY--TPKSALEK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ DV + D DF KL+ G +R++V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + +S + ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSVIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSGKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLMERAHEEGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 228 QMAHYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLAGADAFYDKHIGSLLTPP-DKKEMTAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + W EGV +V R AL+
Sbjct: 339 GLGW--IRINGRAKIAAWAPEGVAVVTRKALI 368
>gi|335996450|ref|ZP_08562367.1| GTP-binding protein [Lactobacillus ruminis SPM0211]
gi|335351520|gb|EGM53011.1| GTP-binding protein [Lactobacillus ruminis SPM0211]
Length = 372
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 137/452 (30%), Positives = 208/452 (46%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q +P+ PG+ P L K
Sbjct: 10 CIGCGAKIQTVDPQEPGFM--PQSALEK-------------------------------- 35
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ ++ + C RC LRHY + DV+ L D DF L++ G + ++++
Sbjct: 36 ----RTDDEDLYCKRCFRLRHYNETADVS----LTDDDF-----LALLNQIGESDALIVN 82
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF GS + + V GN P +++V K DLLP SL ++
Sbjct: 83 VVDIFDFSGSIIPGLHRFV----------------GNNP-ILMVGNKEDLLPRSLKRSKI 125
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+RQ A G+ + ++ SA K + L++ ++D + +V+ +G N GKSTL
Sbjct: 126 RDWLRQSANAQGLRPV-EVCLTSASKGHEIDCLME-LIDKYREGRDVYVVGVTNVGKSTL 183
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K + I +T + PGTTL R+E L DTPG++H +
Sbjct: 184 INQIIK----------HQTGISDLITTSRFPGTTLD--RIEIPFGDGRFLIDTPGIIHKD 231
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ +E +L + KE+KP+ Y++ G ++ + L R D S E V V+
Sbjct: 232 QMAHYLSPKELRLASPQKEIKPKVYQLNEGQTLFLGALARFDY--VSGEKQGVVVYLDNN 289
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H KTENA EKH G+ L PP E+ ++ K VR EF V+ S D+ A
Sbjct: 290 LMIHRTKTENASAFYEKHAGKLLNPP-SEEEMKTFPKLVRFEFKVTEKS------DLVFA 342
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW SV K + + W EGV +VLR A++
Sbjct: 343 GLGWISV--KAGSIVAGWAPEGVSVVLRKAMI 372
>gi|301066734|ref|YP_003788757.1| GTPase [Lactobacillus casei str. Zhang]
gi|417980881|ref|ZP_12621558.1| GTP-binding protein YqeH [Lactobacillus casei 12A]
gi|417983709|ref|ZP_12624345.1| GTP-binding protein YqeH [Lactobacillus casei 21/1]
gi|300439141|gb|ADK18907.1| Predicted GTPase [Lactobacillus casei str. Zhang]
gi|410523817|gb|EKP98736.1| GTP-binding protein YqeH [Lactobacillus casei 12A]
gi|410527978|gb|EKQ02840.1| GTP-binding protein YqeH [Lactobacillus casei 21/1]
Length = 374
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 208/454 (45%), Gaps = 94/454 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q T+PK PGY P L+K + ++E
Sbjct: 12 CIGCGAILQTTDPKKPGYL--PKATLSKA--------------------------DPDDE 43
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ VT L D DF +L++A G + ++++
Sbjct: 44 ----------IYCQRCFRLRHYNEIAPVT----LTDDDF-----LRLLNAIGESNALIVN 84
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + V D V+LV K D+LP SL+P R
Sbjct: 85 VIDIFDFNGSVIPGLHRFVGDNP-----------------VILVGNKADVLPKSLNPNRL 127
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
++W++Q+A+ G+ + + SA K +G+ L+D + R +V+ +G N GKSTL
Sbjct: 128 KNWLQQQAKAQGLRPVATM-LASAKKGFGVDELLDAIEQYRDHR-DVYVVGVTNTGKSTL 185
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K E + +T + PGTTL R+ L L DTPG++H +
Sbjct: 186 INRIIK----------ELTGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRH 233
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ + ++ KLV+ +KP TY++ G +I + GL R D S ++
Sbjct: 234 QMAHFVGPKDLKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRNSF--VIYTDNQ 291
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K ENA +KH G L PP ++ V + VR EF D+ A
Sbjct: 292 LTLHRTKLENADDFYQKHVGGLLSPPQADE-VPDFPPLVRFEF------TPKEKADLVFA 344
Query: 503 GLGWFSVRLKGEAALGVWTY--EGVDIVLRNALL 534
GLGW +V A + V Y +GVD++LR A +
Sbjct: 345 GLGWITV----PAGVTVAGYAPKGVDVLLRRAFI 374
>gi|421453058|ref|ZP_15902414.1| GTP-binding protein [Streptococcus salivarius K12]
gi|400181367|gb|EJO15634.1| GTP-binding protein [Streptococcus salivarius K12]
Length = 372
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 127/396 (32%), Positives = 201/396 (50%), Gaps = 56/396 (14%)
Query: 145 SEVKKHEKP--VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
S +KK E+ + C RC LRHY ++ DV + D + L + ++V+
Sbjct: 27 SSIKKAEETGELYCQRCFRLRHYNEIVDVHIT--------DDEFLKLLHEVGDSDALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS +++ VS GN V+LV K D+LP S+ +
Sbjct: 79 VVDIFDFNGSIIPGLSRFVS---------------GN--DVLLVGNKKDILPKSVKDGKV 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + + SA + +K LI + L R +V+ +G N GKSTL
Sbjct: 122 TQWLTERAHEEGMRPVDVM-LTSAQNHHAIKELIQRIEKLRKGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI K + +K+++ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIKEITG-------DKDVI---TTSRFPGTTLD--KIEIPLDDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ ++ K V+ KE+KP+TY++ AG S+ + GL R D + + + T +
Sbjct: 228 QMAHYLSAKDLKYVSPKKEIKPKTYQLNAGQSLFLGGLGRFDFIDGNKQGF--TAFFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K E A +KH G L PP G K + + K VR EF V + DI +
Sbjct: 286 LKLHRTKLEGADAFYDKHVGSLLMPP-GPKELADFPKLVRHEFTVKDKT------DIVFS 338
Query: 503 GLGWFSVRLKGEA----ALGVWTYEGVDIVLRNALL 534
GLGW +R++G+A + W EGV + +R A++
Sbjct: 339 GLGW--IRVQGKADQPTIVAAWAPEGVGVAVRKAII 372
>gi|422738398|ref|ZP_16793595.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2141]
gi|315145751|gb|EFT89767.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2141]
Length = 369
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 137/452 (30%), Positives = 204/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q NP GY + + FE E
Sbjct: 7 CIGCGAIIQTENPHELGYTPKTA-------------------------------FEKGME 35
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
T EV C RC LRHY ++DV L D DF +L++ G ++++
Sbjct: 36 TGEV-------YCQRCFRLRHYNDIQDVQ----LTDDDF-----LRLLNGLGTEDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + + D V+LV K+D+LP SL T+
Sbjct: 80 VVDIFDFNGSLIPGLHRFIGDNP-----------------VLLVGNKVDILPKSLKKTKM 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R+RA E G+ + L S K ++ L+D + R +V+ +G N GKSTL
Sbjct: 123 VQWMRERAHEAGLRPVDVL-LTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I + + + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIQ----------QTVGVQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ K++ KE+KP+ Y++ A ++ + GL R D + + S + S
Sbjct: 229 QMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH KT A EKH G LQPP ++ V E + VR EF V DI A
Sbjct: 287 LNLHRTKTATADAFYEKHVGGLLQPPRADE-VAEFPELVRFEFSV------KEKTDIVFA 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V G A W +GVD++ R AL+
Sbjct: 340 GLGWITVTEPGVVA--GWAPKGVDVLRRKALI 369
>gi|227534814|ref|ZP_03964863.1| GTP-binding protein [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|418002385|ref|ZP_12642504.1| GTP-binding protein YqeH [Lactobacillus casei UCD174]
gi|227187570|gb|EEI67637.1| GTP-binding protein [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|410544288|gb|EKQ18622.1| GTP-binding protein YqeH [Lactobacillus casei UCD174]
Length = 374
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 208/454 (45%), Gaps = 94/454 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q T+PK PGY P L+K + ++E
Sbjct: 12 CIGCGAILQTTDPKKPGYL--PKATLSKA--------------------------DPDDE 43
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ VT L D DF +L++A G + ++++
Sbjct: 44 ----------IYCQRCFRLRHYNEIAPVT----LTDDDF-----LRLLNAIGESNALIVN 84
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + V D V+LV K D+LP SL+P R
Sbjct: 85 VIDIFDFNGSVIPGLHRFVGDNP-----------------VILVGNKADVLPKSLNPNRL 127
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
++W++Q+A+ G+ + + SA K +G+ L+D + R +V+ +G N GKSTL
Sbjct: 128 KNWLQQQAKAQGLRPVVTM-LASAKKGFGVDELLDAIEKYRDHR-DVYVVGVTNTGKSTL 185
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K E + +T + PGTTL R+ L L DTPG++H +
Sbjct: 186 INRIIK----------ELTGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRH 233
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ + ++ KLV+ +KP TY++ G +I + GL R D S ++
Sbjct: 234 QMAHFVGPKDLKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRNSF--VIYTDNQ 291
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K ENA +KH G L PP ++ V + VR EF D+ A
Sbjct: 292 LTLHRTKLENADDFYQKHVGGLLSPPQADE-VPDFPPLVRFEF------TPKEKADLVFA 344
Query: 503 GLGWFSVRLKGEAALGVWTY--EGVDIVLRNALL 534
GLGW +V A + V Y +GVD++LR A +
Sbjct: 345 GLGWITV----PAGVTVAGYAPKGVDVLLRRAFI 374
>gi|450089114|ref|ZP_21855043.1| GTP-binding protein YqeH [Streptococcus mutans NV1996]
gi|449215966|gb|EMC16128.1| GTP-binding protein YqeH [Streptococcus mutans NV1996]
Length = 368
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 189/382 (49%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
+ C RC LRHY ++ DV + D DF KL+ G +R++V+ V+D DF+GS
Sbjct: 38 IYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGNSRALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + +S + ++LV K D+LP S+ + W+ +RA E
Sbjct: 89 VIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSGKITQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + L SA W +K LI + +L R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
+KNI+ T + PGTTL ++E L + +FDTPG++H +Q+ L+ +
Sbjct: 190 -------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRHQMAHYLSDKA 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 238 LKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKLAR 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP +K + K VR EF + D+ +GLGW +R+
Sbjct: 296 ADAFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFSGLGW--IRIN 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + W EGV +V R AL+
Sbjct: 347 GRAKIAAWAPEGVAVVTRKALI 368
>gi|340399488|ref|YP_004728513.1| nitric-oxide synthase (GTPase) [Streptococcus salivarius CCHSS3]
gi|338743481|emb|CCB93991.1| nitric-oxide synthase (GTPase) [Streptococcus salivarius CCHSS3]
Length = 372
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 127/396 (32%), Positives = 201/396 (50%), Gaps = 56/396 (14%)
Query: 145 SEVKKHEKP--VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
S +KK E+ + C RC LRHY ++ DV + D + L + ++V+
Sbjct: 27 SSIKKAEETGELYCQRCFRLRHYNEIVDVHIT--------DDEFLKLLHEVGDSDALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS +++ VS GN V+LV K D+LP S+ +
Sbjct: 79 VVDIFDFNGSIIPGLSRFVS---------------GN--DVLLVGNKKDILPKSVKDGKV 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + + SA + +K LI + L R +V+ +G N GKSTL
Sbjct: 122 TQWLTERAHEEGMRPVDVM-LTSAQNHHAIKELIQRIEKLRKGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI K + +K+I+ T + PGTTL ++E L +FDTPG++H +
Sbjct: 180 INAIIKEITG-------DKDII---TTSRFPGTTLD--KIEIPLDDGTYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ ++ K V+ KE+KP+TY++ AG ++ + GL R D + + + T +
Sbjct: 228 QMAHYLSAKDLKYVSPKKEIKPKTYQLNAGQTLFLGGLGRFDFIDGNKQGF--TAFFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K E A +KH G L PP G K + + K +R EF V + DI +
Sbjct: 286 LKLHRTKLEGADAFYDKHVGSLLMPP-GPKDLADFPKLIRHEFTVKDKT------DIVFS 338
Query: 503 GLGWFSVRLKGEA----ALGVWTYEGVDIVLRNALL 534
GLGW +R++G+A + W EGV +V+R A++
Sbjct: 339 GLGW--IRVQGKADQPTIVAAWAPEGVGVVVRKAII 372
>gi|323339581|ref|ZP_08079855.1| GTP-binding protein [Lactobacillus ruminis ATCC 25644]
gi|347525535|ref|YP_004832283.1| GTP-binding protein YqeH [Lactobacillus ruminis ATCC 27782]
gi|417973879|ref|ZP_12614713.1| GTPase YqeH [Lactobacillus ruminis ATCC 25644]
gi|323092976|gb|EFZ35574.1| GTP-binding protein [Lactobacillus ruminis ATCC 25644]
gi|345284494|gb|AEN78347.1| GTP-binding protein YqeH [Lactobacillus ruminis ATCC 27782]
gi|346329750|gb|EGX98035.1| GTPase YqeH [Lactobacillus ruminis ATCC 25644]
Length = 372
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 137/452 (30%), Positives = 208/452 (46%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q +P+ PG+ P L K
Sbjct: 10 CIGCGAKIQTVDPQEPGFM--PQSALEK-------------------------------- 35
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ ++ + C RC LRHY + DV+ L D DF L++ G + ++++
Sbjct: 36 ----RTDDEDLYCKRCFRLRHYNETADVS----LTDDDF-----LALLNQIGESDALIVN 82
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF GS + + V GN P +++V K DLLP SL ++
Sbjct: 83 VVDIFDFSGSIIPGLHRFV----------------GNNP-ILMVGNKEDLLPRSLKRSKI 125
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+RQ A G+ + ++ SA K + L++ ++D + +V+ +G N GKSTL
Sbjct: 126 RDWLRQSANAQGLRPV-EVCLTSASKGHEIDRLME-LIDKYREGRDVYVVGVTNVGKSTL 183
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K + I +T + PGTTL R+E L DTPG++H +
Sbjct: 184 INQIIK----------HQTGISDLITTSRFPGTTLD--RIEIPFGDGRFLIDTPGIIHKD 231
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ +E +L + KE+KP+ Y++ G ++ + L R D S E V V+
Sbjct: 232 QMAHYLSPKELRLASPQKEIKPKVYQLNEGQTLFLGALARFDY--VSGEKQGVVVYLDNN 289
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H KTENA EKH G+ L PP E+ ++ K VR EF V+ S D+ A
Sbjct: 290 LMIHRTKTENASAFYEKHAGKLLNPP-SEEEMKTFPKLVRFEFKVTEKS------DLVFA 342
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW SV K + + W EGV +VLR A++
Sbjct: 343 GLGWISV--KAGSIVAGWAPEGVSVVLRKAMI 372
>gi|449961116|ref|ZP_21810793.1| GTP-binding protein YqeH [Streptococcus mutans 4VF1]
gi|449166974|gb|EMB69883.1| GTP-binding protein YqeH [Streptococcus mutans 4VF1]
Length = 368
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 189/382 (49%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
+ C RC LRHY ++ DV + D DF KL+ G +R++V+ V+D DF+GS
Sbjct: 38 IYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + +S + ++LV K D+LP S+ + W+ +RA E
Sbjct: 89 VIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSGKITQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + L SA W +K LI + +L R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
+KNI+ T + PGTTL ++E L + +FDTPG++H +Q+ L+ +
Sbjct: 190 -------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRHQMAHYLSDKA 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 238 LKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKLAR 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP +K + K VR EF + D+ +GLGW +R+
Sbjct: 296 ADAFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFSGLGW--IRIN 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + W EGV +V R AL+
Sbjct: 347 GRAKIAAWAPEGVAVVTRKALI 368
>gi|418011123|ref|ZP_12650889.1| GTP-binding protein YqeH [Lactobacillus casei Lc-10]
gi|410552760|gb|EKQ26774.1| GTP-binding protein YqeH [Lactobacillus casei Lc-10]
Length = 374
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 208/454 (45%), Gaps = 94/454 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q T+PK PGY P L+K + ++E
Sbjct: 12 CIGCGAILQTTDPKKPGYL--PKATLSKA--------------------------DPDDE 43
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ VT L D DF +L++A G + ++++
Sbjct: 44 ----------IYCQRCFRLRHYNEIAPVT----LTDDDF-----LRLLNAIGESNALIVN 84
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + V D V+LV K D+LP SL+P R
Sbjct: 85 VIDIFDFNGSVIPGLHRFVGDNP-----------------VILVGNKADVLPKSLNPNRL 127
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
++W++Q+A+ G+ + + SA K +G+ L+D + R +V+ +G N GKSTL
Sbjct: 128 KNWLQQQAKAQGLRPVATM-LASAKKGFGVDELLDAIEKYRDHR-DVYVVGVTNTGKSTL 185
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K E + +T + PGTTL R+ L L DTPG++H +
Sbjct: 186 INRIIK----------ELTGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRH 233
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ + ++ KLV+ +KP TY++ G +I + GL R D S ++
Sbjct: 234 QMAHFVGPKDLKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRNSF--VIYTDNQ 291
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K ENA +KH G L PP ++ V + VR EF D+ A
Sbjct: 292 LTLHRTKLENADDFYQKHVGGLLSPPQADE-VPDFPPLVRFEF------TPKEKADLVFA 344
Query: 503 GLGWFSVRLKGEAALGVWTY--EGVDIVLRNALL 534
GLGW +V A + V Y +GVD++LR A +
Sbjct: 345 GLGWITV----PAGVTVAGYAPKGVDVLLRRAFI 374
>gi|308069994|ref|YP_003871599.1| hypothetical protein PPE_03243 [Paenibacillus polymyxa E681]
gi|305859273|gb|ADM71061.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
Length = 375
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 211/452 (46%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ +Q T+P+ PGY P + L +
Sbjct: 13 CSGCGITVQTTSPELPGYI--PEKLLTR-------------------------------- 38
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
+PV+C RC +++Y + VTV D KL+S G + ++V+
Sbjct: 39 --------EPVICQRCFRIKNYNETSSVTV---------DQDEFLKLLSQIGDKDALVIH 81
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
+VD DF+GS + + V G+ P V+L V K DLLP + +
Sbjct: 82 IVDIFDFEGSLISGLQRFV----------------GSNP-VILAVNKTDLLPKVTNWNKV 124
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+WV+++A+E G+ + ++ SA KN G L+D V +L G R +V+ +GA N GKSTL
Sbjct: 125 RNWVQKQAKEQGL-RTEEIVLCSAKKNQGFDRLLDVVSELRGNR-DVYVVGATNVGKSTL 182
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N + + + ++ LT + PGTTL +V + L + DTPG+++P
Sbjct: 183 INRLIR----------DYSDMEQELTTSRYPGTTLDMVNIP--LDDGKHIIDTPGIVYPW 230
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
+ + ++R++ + +K LKP Y++ AG ++ G+ R D E +S T + +
Sbjct: 231 RFSEIVSRQDLSAIMPDKPLKPAAYQLDAGQTLFFGGMSRFDFVEGQHQSF--TCYINGG 288
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K E A + H G L PP ++ + E+ +W R EF V S DI +
Sbjct: 289 LKIHRTKLERADQLFADHAGELLSPPTRDQ-LAEMPEWTRHEFRVP----RKSPSDIYIS 343
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW V + A + V GV ++LR AL+
Sbjct: 344 GLGWIRVNSENGALVAVHAPRGVRVLLRPALI 375
>gi|449997466|ref|ZP_21824018.1| GTP-binding protein YqeH [Streptococcus mutans A9]
gi|449181814|gb|EMB83875.1| GTP-binding protein YqeH [Streptococcus mutans A9]
Length = 368
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 204/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGYI--PKSALGK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ DV + D DF KL+ G +R++V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + +S ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSVIPGLQRFISSN-----------------DLLLVGNKADILPKSVKSGKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLMERAHEEGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 228 QMAHYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLAGADAFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + W EGV +V R AL+
Sbjct: 339 GLGW--IRINGRAKIAAWAPEGVAVVTRKALI 368
>gi|312866371|ref|ZP_07726589.1| ribosome biogenesis GTPase YqeH [Streptococcus downei F0415]
gi|311098065|gb|EFQ56291.1| ribosome biogenesis GTPase YqeH [Streptococcus downei F0415]
Length = 368
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 208/452 (46%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q + + PGY + S E E
Sbjct: 6 CIGCGAKIQSRDKEAPGYTPQSS-------------------------------IEKSQE 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
T E+ C RC LRHY ++ DV + D DF KL+ G ++++V+
Sbjct: 35 TGEL-------YCQRCFRLRHYNEIVDVAI----TDDDF-----LKLLHEVGDSQALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS +++ V+ GN V+LV K D+LP S+ +
Sbjct: 79 VVDIFDFNGSVIPGLSRFVA---------------GN--DVLLVGNKKDILPKSVKDGKV 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L SA +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLTERAHEEGLRPVDVL-LTSAQNGQAIKELIARIEELRAGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI K + + +T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIKEITGNQ----------EIITTSRFPGTTLD--KIEIPLDDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ ++ K V+ KE+KP+TY++ ++ + GL R D + + T +
Sbjct: 228 QMAHYLSAKDLKYVSPKKEIKPKTYQLNPSQTLFLGGLGRFDFLQGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K E A KH G L PP K V K VR EF + G + D+ +
Sbjct: 286 LKLHRTKLEGADDFYLKHAGSLLTPP-SAKEVANFPKLVRHEFTIMGKT------DVVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW VR+ G A + W EGV +++R A++
Sbjct: 339 GLGW--VRVNGSARVAAWAPEGVGVMVRKAII 368
>gi|422723394|ref|ZP_16779930.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2137]
gi|424671902|ref|ZP_18108889.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis 599]
gi|315026558|gb|EFT38490.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2137]
gi|402357870|gb|EJU92567.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis 599]
Length = 369
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 137/452 (30%), Positives = 203/452 (44%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q NP GY + + FE E
Sbjct: 7 CIGCGAIIQTENPHELGYTPKTA-------------------------------FEKGME 35
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
T EV C RC LRHY ++DV L D DF +L++ G ++++
Sbjct: 36 TGEV-------YCQRCFRLRHYNDIQDVQ----LTDDDF-----LRLLNGLGTEDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + + D V+LV K+D+LP SL +
Sbjct: 80 VVDIFDFNGSLIPGLHRFIGDNP-----------------VLLVGNKVDILPKSLKKPKM 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R+RA E G+ + L S K ++ L+D + R +V+ +G N GKSTL
Sbjct: 123 VQWMRERAHEAGLRPVDVL-LTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I + + + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIQ----------QTVGVQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ K++ KE+KP+ Y++ A ++ + GL R D + + S + S
Sbjct: 229 QMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH KT A EKH G LQPP ++ V E + VR EF V DI A
Sbjct: 287 LNLHRTKTATADAFYEKHVGGLLQPPRADE-VAEFPELVRFEFSV------KEKTDIVFA 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V G A W EGVD++ R AL+
Sbjct: 340 GLGWITVTEPGVVA--GWAPEGVDVLRRKALI 369
>gi|77411900|ref|ZP_00788232.1| GTP-binding protein [Streptococcus agalactiae CJB111]
gi|77162060|gb|EAO73039.1| GTP-binding protein [Streptococcus agalactiae CJB111]
Length = 372
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 136/453 (30%), Positives = 205/453 (45%), Gaps = 88/453 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q N GY R + L+KG E
Sbjct: 6 CIGCGARIQTENKDAAGYTPRAA-----------------------LEKG--------LE 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ DV + D + L + ++V+ V
Sbjct: 35 TGEL-------YCQRCFRLRHYNEITDVHIT--------DDEFLKLLHEVGDSDALVVNV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+GS +++ V+ GN V+LV K D+LP S+ +
Sbjct: 80 IDIFDFNGSIIPGLSRFVA---------------GN--DVLLVGNKKDILPKSVKDGKVT 122
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ +RA E+G+ + + SA + +K LID + R +V+ +G N GKSTL+
Sbjct: 123 QWLTERAHEEGLRPVDVI-LTSAQNHHAIKDLIDTIEKYRHGR-DVYVVGVTNVGKSTLI 180
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + + R +T + PGTTL ++E L + +FDTPG++H +Q
Sbjct: 181 NAIIREITGSR----------DVITTSRFPGTTLD--KIEIPLDDGSYIFDTPGIIHRHQ 228
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ LT + K V+ KE+KP+TY++ + ++ +AGL R D + T + L
Sbjct: 229 MAHYLTAKNLKYVSPKKEIKPKTYQLNSEQTLFLAGLARFDFISGQKQGF--TAYFDNNL 286
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A KH G+ L PP G K V + K VR EF + +DI +G
Sbjct: 287 NLHRTKLVGADEFYTKHVGKLLTPPTG-KEVSDFPKLVRHEFTI------KDKMDIVYSG 339
Query: 504 LGWFSVRLKGE--AALGVWTYEGVDIVLRNALL 534
LGW V+ + E + VW EGV +VLR AL+
Sbjct: 340 LGWIRVKSEAENPVVVAVWAPEGVAVVLRKALI 372
>gi|322374823|ref|ZP_08049337.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. C300]
gi|321280323|gb|EFX57362.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. C300]
Length = 368
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 139/453 (30%), Positives = 210/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKTGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + + K +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKI-EYYRKGRDVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L A ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGAYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E AC +KH G L PP K E+ K V F + + D+
Sbjct: 285 ELKLHRTKLEGACAFYDKHLGTLLTPP-NSKEKEDFPKLVEHVFAIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|449908951|ref|ZP_21794064.1| GTP-binding protein YqeH [Streptococcus mutans OMZ175]
gi|449262015|gb|EMC59473.1| GTP-binding protein YqeH [Streptococcus mutans OMZ175]
Length = 368
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 189/382 (49%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
+ C RC LRHY ++ DV + D DF KL+ G +R++V+ V+D DF+GS
Sbjct: 38 IYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + +S ++LV K D+LP S+ + W+ +RA E
Sbjct: 89 VIPGLQRFISSN-----------------DLLLVGNKADILPKSVKSGKITQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + L SA W +K LI + +L R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
+KNI+ T + PGTTL ++E L + +FDTPG++H +Q+ L+ +
Sbjct: 190 -------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRHQMAHYLSDKA 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 238 LKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKLVG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A T +KH G L PP +K + K VR EF + D+ +GLGW +R+
Sbjct: 296 ADTFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFSGLGW--IRIN 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + W EGV +V R +L+
Sbjct: 347 GRAKIAAWAPEGVAVVTRKSLI 368
>gi|449976730|ref|ZP_21816343.1| GTP-binding protein YqeH [Streptococcus mutans 11VS1]
gi|449175269|gb|EMB77696.1| GTP-binding protein YqeH [Streptococcus mutans 11VS1]
Length = 368
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 188/382 (49%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
+ C RC LRHY ++ DV + D DF KL+ G +R++V+ V+D DF+GS
Sbjct: 38 IYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + +S ++LV K D+LP S+ + W+ +RA E
Sbjct: 89 VIPGLQRFISSN-----------------DLLLVGNKADILPKSVKSGKITQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + L SA W +K LI + +L R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
+KNI+ T + PGTTL ++E L + +FDTPG++H +Q+ L+ +
Sbjct: 190 -------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRHQMAHYLSDKA 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 238 LKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKLAG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP +K + K VR EF + D+ +GLGW +R+
Sbjct: 296 ADAFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFSGLGW--IRIN 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + W EGV +V R AL+
Sbjct: 347 GRAKIAAWAPEGVAVVTRKALI 368
>gi|257087775|ref|ZP_05582136.1| nitric-oxide synthase [Enterococcus faecalis D6]
gi|256995805|gb|EEU83107.1| nitric-oxide synthase [Enterococcus faecalis D6]
Length = 375
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 137/452 (30%), Positives = 203/452 (44%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q NP GY + + FE E
Sbjct: 13 CIGCGAIIQTENPHELGYTPKTA-------------------------------FEKGME 41
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
T EV C RC LRHY ++DV L D DF +L++ G ++++
Sbjct: 42 TGEV-------YCQRCFRLRHYNDIQDVQ----LTDDDF-----LRLLNGLGTEDALIVN 85
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + + D V+LV K+D+LP SL +
Sbjct: 86 VVDIFDFNGSLIPGLHRFIGDNP-----------------VLLVGNKVDILPKSLKKPKM 128
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R+RA E G+ + L S K ++ L+D + R +V+ +G N GKSTL
Sbjct: 129 VQWMRERAHEAGLRPVDVL-LTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKSTL 186
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I + + + +T + PGTTL ++E L L DTPG++H +
Sbjct: 187 INQIIQ----------QTVGVQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 234
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ K++ KE+KP+ Y++ A ++ + GL R D + + S + S
Sbjct: 235 QMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSND 292
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH KT A EKH G LQPP ++ V E + VR EF V DI A
Sbjct: 293 LNLHRTKTATADAFYEKHVGGLLQPPRADE-VAEFPELVRFEFSV------KEKTDIVFA 345
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V G A W EGVD++ R AL+
Sbjct: 346 GLGWITVTEPGVVA--GWAPEGVDVLRRKALI 375
>gi|450052101|ref|ZP_21841149.1| GTP-binding protein YqeH [Streptococcus mutans NFSM1]
gi|449201224|gb|EMC02230.1| GTP-binding protein YqeH [Streptococcus mutans NFSM1]
Length = 368
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 205/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGY--TPKSALGK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ DV + D DF KL+ G +R++V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + +S ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSVIPGLQRFISSN-----------------DLLLVGNKADILPKSVKSGKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLIERAHEEGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 228 QMAHYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLAGADAFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + VW EGV +V R +L+
Sbjct: 339 GLGW--IRINGRAKIAVWAPEGVAVVTRKSLI 368
>gi|450044471|ref|ZP_21837871.1| GTP-binding protein YqeH [Streptococcus mutans N34]
gi|449201640|gb|EMC02626.1| GTP-binding protein YqeH [Streptococcus mutans N34]
Length = 368
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 205/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGY--TPKSALEK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ DV + D DF KL+ G +R++V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + +S + ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSVIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSVKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLMERAHEEGLRPL-DLILTSAQNKWAIKELIAKIDELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 228 QMAHYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLARADAFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + W EGV +V R +L+
Sbjct: 339 GLGW--IRINGRAKIAAWAPEGVAVVTRKSLI 368
>gi|312868748|ref|ZP_07728940.1| ribosome biogenesis GTPase YqeH [Lactobacillus oris PB013-T2-3]
gi|311095734|gb|EFQ53986.1| ribosome biogenesis GTPase YqeH [Lactobacillus oris PB013-T2-3]
Length = 372
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 139/451 (30%), Positives = 212/451 (47%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q T+P GY P+ +++K+G A +E
Sbjct: 10 CIGCGAVIQSTDPAALGY--TPA---------------------SAVKRG-----LANDE 41
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ C RC LRHY ++ V+ L D DF +G+ A ++++ V
Sbjct: 42 ----------LYCQRCFRLRHYNEIAPVS----LTDDDFLRLLGQ----IRDANALIVYV 83
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS + + V D V+LV K DLLP SL +
Sbjct: 84 VDIFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKEDLLPRSLRRPKLC 126
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ+A + GI + + VSA KN + L+ + R +V+ +G N GKSTL+
Sbjct: 127 DWIRQQANQAGIRPVDTV-LVSAKKNHEIDELLATIEKYRHDR-DVYVVGVTNVGKSTLI 184
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K + + +T + PGTTL +E L KL DTPG++HP+Q
Sbjct: 185 NQIIK----------QRTGVQDLITTSRFPGTTLD--EIEIPLDDGHKLVDTPGIIHPHQ 232
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ ++ K+V KE+KPRTY++ G ++ I G+ R D E+ S +VT + + L
Sbjct: 233 MAHVLSAKDLKIVAPQKEIKPRTYQLDPGQTVFIGGVARFDF-ETGPHSGFVTYFDN-NL 290
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K NA + EKH G L PP E+ + + VR+EFHV+ S D+ G
Sbjct: 291 TLHRTKLSNADSFYEKHRGDLLTPPTAEE-LNDFPPLVREEFHVNEKS------DVVFEG 343
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V + W +GV ++R A++
Sbjct: 344 LGWVTV--PAGVTVAAWVPKGVAALVRKAMI 372
>gi|116495171|ref|YP_806905.1| GTP-binding protein YqeH [Lactobacillus casei ATCC 334]
gi|385820393|ref|YP_005856780.1| hypothetical protein LC2W_1864 [Lactobacillus casei LC2W]
gi|385823580|ref|YP_005859922.1| hypothetical protein LCBD_1885 [Lactobacillus casei BD-II]
gi|417987069|ref|ZP_12627631.1| GTP-binding protein YqeH [Lactobacillus casei 32G]
gi|417989965|ref|ZP_12630460.1| GTP-binding protein YqeH [Lactobacillus casei A2-362]
gi|417993212|ref|ZP_12633561.1| GTP-binding protein YqeH [Lactobacillus casei CRF28]
gi|417996556|ref|ZP_12636835.1| GTP-binding protein YqeH [Lactobacillus casei M36]
gi|417999427|ref|ZP_12639636.1| GTP-binding protein YqeH [Lactobacillus casei T71499]
gi|418005414|ref|ZP_12645407.1| GTP-binding protein YqeH [Lactobacillus casei UW1]
gi|418013175|ref|ZP_12652828.1| GTP-binding protein YqeH [Lactobacillus casei Lpc-37]
gi|116105321|gb|ABJ70463.1| Predicted GTPase [Lactobacillus casei ATCC 334]
gi|327382720|gb|AEA54196.1| hypothetical protein LC2W_1864 [Lactobacillus casei LC2W]
gi|327385907|gb|AEA57381.1| hypothetical protein LCBD_1885 [Lactobacillus casei BD-II]
gi|410524133|gb|EKP99050.1| GTP-binding protein YqeH [Lactobacillus casei 32G]
gi|410531684|gb|EKQ06400.1| GTP-binding protein YqeH [Lactobacillus casei CRF28]
gi|410535402|gb|EKQ10027.1| GTP-binding protein YqeH [Lactobacillus casei M36]
gi|410536787|gb|EKQ11378.1| GTP-binding protein YqeH [Lactobacillus casei A2-362]
gi|410539058|gb|EKQ13596.1| GTP-binding protein YqeH [Lactobacillus casei T71499]
gi|410546811|gb|EKQ21055.1| GTP-binding protein YqeH [Lactobacillus casei UW1]
gi|410556122|gb|EKQ30044.1| GTP-binding protein YqeH [Lactobacillus casei Lpc-37]
Length = 374
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 208/454 (45%), Gaps = 94/454 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q T+PK PGY P L+K + ++E
Sbjct: 12 CIGCGAILQTTDPKKPGYL--PKATLSKA--------------------------DPDDE 43
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ VT L D DF +L++A G + ++++
Sbjct: 44 ----------IYCQRCFRLRHYNEIAPVT----LTDDDF-----LRLLNAIGESNALIVN 84
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + V D V+LV K D+LP SL+P R
Sbjct: 85 VIDIFDFNGSVIPGLHRFVGDNP-----------------VILVGNKADVLPKSLNPNRL 127
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
++W++Q+A+ G+ + + SA K +G+ L+D + R +V+ +G N GKSTL
Sbjct: 128 KNWLQQQAKAQGLRPVATM-LASAKKGFGVDELLDAIEKYRDHR-DVYVVGVTNTGKSTL 185
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K E + +T + PGTTL R+ L L DTPG++H +
Sbjct: 186 INRIIK----------ELTGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRH 233
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ + ++ KLV+ +KP TY++ G +I + GL R D S ++
Sbjct: 234 QMAHFVGPKDLKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRNSF--VIYTDNQ 291
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K ENA +KH G L PP ++ V + VR EF D+ A
Sbjct: 292 LTLHRTKLENADDFYQKHVGGLLSPPQPDE-VPDFPPLVRFEF------TPKEKADLVFA 344
Query: 503 GLGWFSVRLKGEAALGVWTY--EGVDIVLRNALL 534
GLGW +V A + V Y +GVD++LR A +
Sbjct: 345 GLGWITV----PAGVTVAGYAPKGVDVLLRRAFI 374
>gi|374324962|ref|YP_005078091.1| hypothetical protein HPL003_25760 [Paenibacillus terrae HPL-003]
gi|357203971|gb|AET61868.1| hypothetical protein HPL003_25760 [Paenibacillus terrae HPL-003]
Length = 375
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 210/452 (46%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ MQ T+P+ PGY P + L +
Sbjct: 13 CSGCGITMQTTSPELPGYI--PEKLLTR-------------------------------- 38
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
+PV+C RC +++Y + V V D KL+S G + ++V+
Sbjct: 39 --------EPVICQRCFRIKNYNETSSVAV---------DQDEFLKLLSQIGDKDALVIH 81
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
+VD DF+GS + + V G+ P VVL V K DLLP + +
Sbjct: 82 IVDIFDFEGSLISGLQRFV----------------GSNP-VVLAVNKTDLLPKVTNWNKV 124
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+WV+++A+E G+ + + SA KN G L+D V +L G R +V+ +GA N GKSTL
Sbjct: 125 LNWVQKQAKEQGL-RTADIVLCSAQKNQGFDRLLDVVSELRGNR-DVYVVGATNVGKSTL 182
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N + + + ++ LT + PGTTL +V + L + DTPG+++P
Sbjct: 183 INRLIR----------DHSDMEQELTTSRYPGTTLDMVNIP--LDDGKHIIDTPGIVYPW 230
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
+ + ++R++ + +K LKP Y++ G ++ G+ R D E +S T + +
Sbjct: 231 RFSEIVSRQDLSAIMPDKPLKPAAYQLDPGQTLFFGGMARFDFVEGQHQSF--TCYINGG 288
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K E A + E H G L PP ++ + ++ +W R EF V S +DI +
Sbjct: 289 LKIHRTKLERADQLFEDHAGELLSPPTRDQ-LADMPEWTRHEFRVP----RKSQLDIYIS 343
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW V + A + V G+ ++LR +L+
Sbjct: 344 GLGWIRVNSENGALVAVHAPRGIRVLLRPSLI 375
>gi|337281510|ref|YP_004620981.1| GTP-binding protein [Streptococcus parasanguinis ATCC 15912]
gi|387879069|ref|YP_006309372.1| hypothetical protein Spaf_0549 [Streptococcus parasanguinis FW213]
gi|335369103|gb|AEH55053.1| GTP-binding protein [Streptococcus parasanguinis ATCC 15912]
gi|386792524|gb|AFJ25559.1| hypothetical protein Spaf_0549 [Streptococcus parasanguinis FW213]
Length = 368
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 144/456 (31%), Positives = 211/456 (46%), Gaps = 98/456 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q N + GY P L K GL E
Sbjct: 6 CIGCGAPIQTENKEGLGY--TPQSALEK----------------------GL-------E 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
T EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 35 TGEV-------YCQRCFRLRHYNEITDVH----LTDDDF-----LKLLHEVGDSDALVVN 78
Query: 203 VVDAADFDGS----FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLS 258
VVD DF+GS PR VA GN V+LV K D+LP S+
Sbjct: 79 VVDIFDFNGSVIPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVK 117
Query: 259 PTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAG 318
++ HW+ +RA E+G+ + + SA +K L++ + R +V+ +G N G
Sbjct: 118 DSKVTHWLMERAHEEGMRPVDVV-LTSAQNKSAIKDLMEKIEQYRKGR-DVYVVGVTNVG 175
Query: 319 KSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGL 378
KSTL+NAI + + +K+I+ T + PGTTL ++E L + ++DTPG+
Sbjct: 176 KSTLINAIIQEITG-------DKDII---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGI 223
Query: 379 LHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVW 438
+H +Q+ LT + K V+ KE+KP+TY++ G ++ + GL R D + + T +
Sbjct: 224 IHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPGQTLFLGGLGRFDFIKGEKQGF--TAF 281
Query: 439 ASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVD 498
L LH K E A +KH G L PP K EE V EF + + D
Sbjct: 282 FDNELKLHRTKLEGATAFYDKHVGGLLTPP-NSKEKEEFPPLVSHEFTIKDKT------D 334
Query: 499 IAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+ +GLGW +R+ GEA + VW EGV +V R A++
Sbjct: 335 LVISGLGW--IRVNGEAKVAVWAPEGVAVVTRKAII 368
>gi|257869176|ref|ZP_05648829.1| GTP-binding protein YqeH [Enterococcus gallinarum EG2]
gi|357050059|ref|ZP_09111271.1| hypothetical protein HMPREF9478_01254 [Enterococcus saccharolyticus
30_1]
gi|257803340|gb|EEV32162.1| GTP-binding protein YqeH [Enterococcus gallinarum EG2]
gi|355382229|gb|EHG29330.1| hypothetical protein HMPREF9478_01254 [Enterococcus saccharolyticus
30_1]
Length = 370
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 142/455 (31%), Positives = 209/455 (45%), Gaps = 96/455 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+Q NP GY P L K GL E
Sbjct: 8 CIGCGALIQTENPTELGY--TPLSALEK----------------------GL-------E 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
T EV C RC LRHY +++DV+ L D DF +L++ G + ++++
Sbjct: 37 TGEV-------YCQRCFRLRHYNEIQDVS----LTDDDF-----LRLLNELGQKDALIVN 80
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + V D V+LV K+D+LP SL ++
Sbjct: 81 VVDIFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKVDILPKSLKKSKM 123
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R+RA E G+ I L SA K + L+ +D + +V+ +G N GKSTL
Sbjct: 124 TQWMRERAHEAGLRPIDVL-LTSAKKAAEMTELLQ-AIDHYREGRDVYVVGVTNVGKSTL 181
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K + + +T + PGTTL ++E L L DTPG++H +
Sbjct: 182 INQIIK----------QTAGVQELITTSRFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 229
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ K+V NKE+KP++Y++ AG ++ G+ R D + S + +
Sbjct: 230 QMAHYLGKKDLKIVAPNKEIKPKSYQLNAGQTLFFGGVARFDFIQGERSSF--IAYVAND 287
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKW---VRKEFHVSGSSWDSSSVDI 499
+ LH K E A +KH G LQPP R +EL + VR EF + DI
Sbjct: 288 VVLHRTKLEKADAFYQKHVGGLLQPP----RPDELADFPELVRFEFSI------KEKTDI 337
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
AGLGW +V G A W +GVD++ R AL+
Sbjct: 338 VFAGLGWITVTKPGVVA--GWAPKGVDVIKRKALI 370
>gi|315641160|ref|ZP_07896238.1| GTP-binding protein [Enterococcus italicus DSM 15952]
gi|315483084|gb|EFU73602.1| GTP-binding protein [Enterococcus italicus DSM 15952]
Length = 375
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 211/452 (46%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q T+P GY P + K GL ENE
Sbjct: 13 CIGCGVTIQTTDPNELGY--TPKAAIEK----------------------GL-----ENE 43
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY +++DV L D DF +L++ G ++++
Sbjct: 44 E---------MYCQRCFRLRHYNEIQDVA----LTDNDF-----LQLLNEIGKTDALIVN 85
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + V D +++V K+D+LP SL +
Sbjct: 86 VVDIFDFNGSLIPGLHRFVGDNP-----------------IIMVGNKVDVLPKSLKKPKL 128
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+++RA E+G+ + L SA KN + L+ + R +V+ +G N GKSTL
Sbjct: 129 IQWMKERAFEEGLRPVEVL-LTSAKKNQEITRLLATIEQYRKGR-DVYIVGVTNVGKSTL 186
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I + + + +T + PGTTL ++E L A + DTPG++H +
Sbjct: 187 INQIIQ----------QATGVKELITTSRFPGTTLD--KIEIPLEDGAVMIDTPGIIHRH 234
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ K+V KE+KP+TY+++ ++ + G+ R D + S T + +
Sbjct: 235 QMAHYLGKKDLKIVAPQKEIKPKTYQLQPQQTLFLGGIARFDFIKGEKSSF--TAYLAND 292
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K E A EKH GR LQPP E + E + VR EF + S D+ A
Sbjct: 293 LLIHRTKLEKADAFYEKHVGRLLQPP-AEDELAEFPELVRFEFSIKERS------DLVFA 345
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW ++ G + W +GV++V+R AL+
Sbjct: 346 GLGWITITKPG--VIAGWAPKGVNVVIRKALI 375
>gi|239632052|ref|ZP_04675083.1| nitric-oxide synthase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|239526517|gb|EEQ65518.1| nitric-oxide synthase [Lactobacillus paracasei subsp. paracasei
8700:2]
Length = 374
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 135/454 (29%), Positives = 208/454 (45%), Gaps = 94/454 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q T+PK PGY P L+K + ++E
Sbjct: 12 CIGCGAILQTTDPKKPGYL--PKATLSKA--------------------------DPDDE 43
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ VT L D DF +L++A G + ++++
Sbjct: 44 ----------IYCQRCFRLRHYNEIAPVT----LTDDDF-----LRLLNAIGESNALIVN 84
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + V D V+LV K D+LP SL+P R
Sbjct: 85 VIDIFDFNGSVIPGLHRFVGDNP-----------------VILVGNKADVLPKSLNPNRL 127
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
++W++Q+A+ G+ + + SA K +G+ L+D + R +V+ +G N GKSTL
Sbjct: 128 KNWLQQQAKAQGLRPVATM-LASAKKGFGVDELLDAIEQYRDHR-DVYVVGVTNTGKSTL 185
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K E + +T + PGTTL R+ L L DTPG++H +
Sbjct: 186 INRIIK----------ELTGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRH 233
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ + ++ KLV+ +KP TY++ G +I + GL + D S ++
Sbjct: 234 QMAHFVGPKDLKLVSPTSVIKPATYQLNEGQTIFLGGLAQFDYLRGGRNSF--VIYTDNQ 291
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K ENA +KH G L PP ++ V + VR EF D+ A
Sbjct: 292 LTLHRTKLENADDFYQKHVGGLLSPPQADE-VPDFPPLVRFEF------TPKEKADLVFA 344
Query: 503 GLGWFSVRLKGEAALGVWTY--EGVDIVLRNALL 534
GLGW +V A + V Y +GVD++LR A +
Sbjct: 345 GLGWITV----PAGVTVAGYAPKGVDVLLRRAFI 374
>gi|450072630|ref|ZP_21848694.1| GTP-binding protein YqeH [Streptococcus mutans M2A]
gi|449210944|gb|EMC11369.1| GTP-binding protein YqeH [Streptococcus mutans M2A]
Length = 368
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 204/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGY--TPKSALEK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ DV + D DF KL+ G +R+ V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRAFVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + +S + ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSVIPGLQRFISSS-----------------DLLLVGNKTDILPKSVKSGKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLMERAHEEGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 228 QMAHYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLAGADAFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + W EGV +V R +L+
Sbjct: 339 GLGW--IRINGRAKIAAWAPEGVAVVTRKSLI 368
>gi|366085737|ref|ZP_09452222.1| GTPase YqeH [Lactobacillus zeae KCTC 3804]
Length = 374
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 204/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q T+PK PGY P+ L K
Sbjct: 12 CIGCGAILQTTDPKQPGYL--PAATLAKADT----------------------------- 40
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
E + C RC LRHY ++ VT L D DF +L++A G + ++++
Sbjct: 41 -------EDDIYCQRCFRLRHYNEIAPVT----LTDDDF-----LRLLNAIGESNALIVN 84
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + V D V+LV K D+LP SL+P R
Sbjct: 85 VIDIFDFNGSVIPGLHRFVGDNP-----------------VILVGNKADVLPKSLNPNRL 127
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
++W++Q+A+ G+ + + SA K +G+ L+ + R +V+ +G N GKSTL
Sbjct: 128 KNWLQQQAKAQGLRPVATM-LASAKKGFGVDELLSAIEKYREHR-DVYVVGVTNTGKSTL 185
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K E + + +T + PGTTL R+ L L DTPG++H +
Sbjct: 186 INRIIK----------ELTGVENLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRH 233
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ + ++ KLV+ +KP TY++ G +I + GL R D +S ++
Sbjct: 234 QMAHFVGPKDLKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRQSF--VIYTDNQ 291
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
LPLH K NA KH G L PP ++ V + VR EF S D+ A
Sbjct: 292 LPLHRTKLINADDFYHKHVGGLLAPPQADE-VAQFPPLVRFEFTPKEKS------DLVFA 344
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V + + +GVD++LR A +
Sbjct: 345 GLGWITV--PAGVTIAGYAPKGVDVLLRKAFI 374
>gi|409997539|ref|YP_006751940.1| hypothetical protein BN194_18740 [Lactobacillus casei W56]
gi|406358551|emb|CCK22821.1| Uncharacterized protein yqeH [Lactobacillus casei W56]
Length = 409
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 208/454 (45%), Gaps = 94/454 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q T+PK PGY P L+K + ++E
Sbjct: 47 CIGCGAILQTTDPKKPGYL--PKATLSKA--------------------------DPDDE 78
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ VT L D DF +L++A G + ++++
Sbjct: 79 ----------IYCQRCFRLRHYNEIAPVT----LTDDDF-----LRLLNAIGESNALIVN 119
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + V D V+LV K D+LP SL+P R
Sbjct: 120 VIDIFDFNGSVIPGLHRFVGDNP-----------------VILVGNKADVLPKSLNPNRL 162
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
++W++Q+A+ G+ + + SA K +G+ L+D + R +V+ +G N GKSTL
Sbjct: 163 KNWLQQQAKAQGLRPVATM-LASAKKGFGVDELLDAIEKYRDHR-DVYVVGVTNTGKSTL 220
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K E + +T + PGTTL R+ L L DTPG++H +
Sbjct: 221 INRIIK----------ELTGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRH 268
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ + ++ KLV+ +KP TY++ G +I + GL R D S ++
Sbjct: 269 QMAHFVGPKDLKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRNSF--VIYTDNQ 326
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K ENA +KH G L PP ++ V + VR EF D+ A
Sbjct: 327 LTLHRTKLENADDFYQKHVGGLLSPPQPDE-VPDFPPLVRFEFT------PKEKADLVFA 379
Query: 503 GLGWFSVRLKGEAALGVWTY--EGVDIVLRNALL 534
GLGW +V A + V Y +GVD++LR A +
Sbjct: 380 GLGWITV----PAGVTVAGYAPKGVDVLLRRAFI 409
>gi|419706291|ref|ZP_14233817.1| Putative conserved GTP-binding protein [Streptococcus salivarius
PS4]
gi|383283961|gb|EIC81899.1| Putative conserved GTP-binding protein [Streptococcus salivarius
PS4]
Length = 372
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/396 (32%), Positives = 200/396 (50%), Gaps = 56/396 (14%)
Query: 145 SEVKKHEK--PVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
S +KK E+ + C RC LRHY ++ DV + D + L + ++V+
Sbjct: 27 SSIKKAEETGDLYCQRCFRLRHYNEIVDVHIT--------DDEFLKLLHEVGDSDALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS +++ VS GN V+LV K D+LP S+ +
Sbjct: 79 VVDIFDFNGSIIPGLSRFVS---------------GN--DVLLVGNKKDILPKSVKDGKV 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + + SA + +K LI + L R +V+ +G N GKSTL
Sbjct: 122 TQWLTERAYEEGMRPVDVM-LTSAQNHHAIKELIQRIEKLRKGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI K + +K+++ T + PGTTL ++E L +FDTPG++H +
Sbjct: 180 INAIIKEITG-------DKDVI---TTSRFPGTTLD--KIEIPLDDGTYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ ++ K V+ KE+KP+TY++ A ++ + GL R D + + T +
Sbjct: 228 QMAHYLSAKDLKYVSPKKEIKPKTYQLNASQTLFLGGLGRFDFIDGDKQGF--TAFFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K E A T +KH G L PP G K + + K VR EF V + DI +
Sbjct: 286 LKLHRTKLEGADTFYDKHVGSLLMPP-GPKDLTDFPKLVRHEFTVKDKT------DIVFS 338
Query: 503 GLGWFSVRLKGEA----ALGVWTYEGVDIVLRNALL 534
GLGW +R++G+A + W EGV +V+R A++
Sbjct: 339 GLGW--IRVQGKADQPTIVAAWAPEGVGVVVRKAII 372
>gi|392957245|ref|ZP_10322769.1| GTPase YqeH [Bacillus macauensis ZFHKF-1]
gi|391876652|gb|EIT85248.1| GTPase YqeH [Bacillus macauensis ZFHKF-1]
Length = 366
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 204/383 (53%), Gaps = 53/383 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V+C RC L+HY +++DV L D D+ RK++S+ G +S+V+ +VD DF+GS
Sbjct: 35 VICQRCFRLKHYNEIQDVN----LTDDDY-----RKILSSIGDTQSLVVKIVDIFDFNGS 85
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + + + GK+ +++LV K+DLLP S++ R + W+ A+E
Sbjct: 86 WLPGIHRYI-------------GKN----KLMLVGNKVDLLPKSVNKNRLKQWMATMAKE 128
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDL-AGKRGNVWAIGAQNAGKSTLLNAIAKSVD 331
G+ K ++H VS+ K GL+ + + + +L GK +V+ +G N GKST +N + K +
Sbjct: 129 YGV-KAEEVHLVSSAKGTGLQEVAEQIDELREGK--DVYVVGCTNVGKSTFINGLIKQLG 185
Query: 332 AGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTRE 391
E+++I+ T + PGTTL ++ + L + LFDTPG+++ +Q+ ++++
Sbjct: 186 T------EQQDII---TTSYFPGTTLNLIDIP--LDEETALFDTPGIINHHQMAHFVSKD 234
Query: 392 EQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTE 451
E K++ KE+KP Y++ S+ + GL R D + S + S L +H K E
Sbjct: 235 ELKIIMPKKEIKPLVYQLNEEQSLFLGGLARFDYIKGGRRSFVCHI--SNDLNIHRTKLE 292
Query: 452 NACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRL 511
A + EKH G L PP +++ L ++ EF + DI +GLGW SV+
Sbjct: 293 RADDLYEKHLGELLTPPQDREKLPPLKRY---EFMIK-----EKDTDIVFSGLGWISVKE 344
Query: 512 KGEAALGVWTYEGVDIVLRNALL 534
G A + + EGV + LR +L+
Sbjct: 345 AG-AKVAAYAPEGVAVTLRPSLI 366
>gi|422853681|ref|ZP_16900345.1| GTP-binding protein [Streptococcus sanguinis SK160]
gi|325696992|gb|EGD38879.1| GTP-binding protein [Streptococcus sanguinis SK160]
Length = 368
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/385 (32%), Positives = 192/385 (49%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVQ----LTDDDF----LRLLHEVGDSDALVVNVVDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ ++ W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKDSKVTQWLTER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LID + + K +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKDLIDKI-EYCRKGRDVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ +K+I+ T + PGTTL ++E L + ++DTPG++H +Q+ LT
Sbjct: 187 ITG-------DKDII---TTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLT 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYISPKKEIKPKTYQLNPNQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
E A +KH G L PP+G+++ EE V+ EF + + DI +GLGW +
Sbjct: 293 LEGASDFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W EGV IV R A++
Sbjct: 344 RVSGPARVAGWAPEGVAIVTRKAII 368
>gi|449926275|ref|ZP_21800673.1| GTP-binding protein YqeH [Streptococcus mutans 4SM1]
gi|449160747|gb|EMB63989.1| GTP-binding protein YqeH [Streptococcus mutans 4SM1]
Length = 368
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 205/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGY--TPKSALEK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ DV + D DF KL+ G ++++V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSKALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + +S + ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSVIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSGKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLMERAYEEGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 228 QMAHYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLAGADAFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + W EGV +V R AL+
Sbjct: 339 GLGW--IRINGRAKIAAWAPEGVAVVTRKALI 368
>gi|417917766|ref|ZP_12561325.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis SK236]
gi|342830403|gb|EGU64742.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis SK236]
Length = 368
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 193/386 (50%), Gaps = 60/386 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V C RC LRHY ++ DV L D DF KL+ G + ++V+ VVD DF+GS
Sbjct: 38 VYCQRCFRLRHYNEITDVH----LTDDDF-----LKLLHEVGDSDALVVNVVDIFDFNGS 88
Query: 213 ----FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQ 268
PR VA GN V+LV K D+LP S+ ++ HW+ +
Sbjct: 89 VIPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKDSKVTHWLME 127
Query: 269 RAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAK 328
RA E+G+ + + SA +K L++ + R +V+ +G N GKSTL+NAI +
Sbjct: 128 RAHEEGMRPVDVV-LTSAQNKSAIKDLMEKIEQYRKGR-DVYVVGVTNVGKSTLINAIIQ 185
Query: 329 SVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRL 388
+ +K+I+ T + PGTTL ++E L + ++DTPG++H +Q+ L
Sbjct: 186 EITG-------DKDII---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYL 233
Query: 389 TREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMG 448
T + K V+ KE+KP+TY++ G ++ + GL R D + + T + L LH
Sbjct: 234 TAKNLKYVSPKKEIKPKTYQLNPGQTLFLGGLGRFDFIKGEKQGF--TAFFDNELKLHRT 291
Query: 449 KTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFS 508
K E A +KH G L PP K EE V EF + + D+ +GLGW
Sbjct: 292 KLEGATAFYDKHVGGLLTPP-NSKEKEEFPPLVSHEFTIKDKT------DLVISGLGW-- 342
Query: 509 VRLKGEAALGVWTYEGVDIVLRNALL 534
+R+ GEA + VW EGV +V R A++
Sbjct: 343 IRVSGEAKVAVWAPEGVAVVTRKAII 368
>gi|450137692|ref|ZP_21871776.1| GTP-binding protein YqeH [Streptococcus mutans NLML1]
gi|449234970|gb|EMC33952.1| GTP-binding protein YqeH [Streptococcus mutans NLML1]
Length = 368
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 190/382 (49%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
+ C RC LRHY ++ DV + D DF KL+ G +R++V+ V+D DF+GS
Sbjct: 38 IYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + +S + ++LV K D+LP S+ + W+ +RA E
Sbjct: 89 VIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSGKITQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + L SA W +K LI + +L R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
+KNI+ T + PGTTL ++E L + +FDTPG++H +Q+ L+ +
Sbjct: 190 -------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHCHQMAHYLSDKA 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K ++ KE+KP+TY++ ++ + GL+R D + T + L LH K
Sbjct: 238 LKYISPKKEIKPKTYQLNPEQTLFLGGLVRFDYVTGDKQGF--TAYFDNNLKLHRTKLAG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP +K + K VR EF + D+ +GLGW +R+
Sbjct: 296 ADAFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFSGLGW--IRIN 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + W EGV +V R +L+
Sbjct: 347 GRAKIVAWAPEGVAVVTRKSLI 368
>gi|422702221|ref|ZP_16760059.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1302]
gi|315166303|gb|EFU10320.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1302]
Length = 369
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 203/452 (44%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q NP GY + + FE E
Sbjct: 7 CIGCGAIIQTENPHELGYTPKTA-------------------------------FEKGME 35
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
T EV C RC LRHY ++DV L D DF +L++ G ++++
Sbjct: 36 TGEV-------YCQRCFRLRHYNDIQDVQ----LTDDDF-----LRLLNGLGTEDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + + D V+LV K+D+LP SL +
Sbjct: 80 VVDIFDFNGSLIPGLHRFIGDNP-----------------VLLVGNKVDILPKSLKKPKM 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R+RA E G+ + L S K ++ L+D + R +V+ +G N GKSTL
Sbjct: 123 VQWMRERAHEAGLRPVDVL-LTSGKKPQEMQELLDTIEKYREDR-DVYVVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I + + + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIQ----------QTVGVQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ K++ KE+KP+ Y++ A ++ + GL R D + + S + S
Sbjct: 229 QMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH KT A EKH G LQPP ++ V E + VR EF V DI A
Sbjct: 287 LNLHRTKTATADAFYEKHVGGLLQPPRADE-VAEFPELVRFEFSV------KEKTDIVFA 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V G A W +GVD++ R AL+
Sbjct: 340 GLGWITVTEPGVVA--GWAPKGVDVLRRKALI 369
>gi|29377339|ref|NP_816493.1| GTP-binding protein YqeH [Enterococcus faecalis V583]
gi|227554296|ref|ZP_03984343.1| GTP-binding protein [Enterococcus faecalis HH22]
gi|422712679|ref|ZP_16769442.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0309A]
gi|422716477|ref|ZP_16773181.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0309B]
gi|29344806|gb|AAO82563.1| GTPase of unknown function [Enterococcus faecalis V583]
gi|227176586|gb|EEI57558.1| GTP-binding protein [Enterococcus faecalis HH22]
gi|315575232|gb|EFU87423.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0309B]
gi|315582408|gb|EFU94599.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0309A]
Length = 369
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 203/452 (44%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q NP GY + + FE E
Sbjct: 7 CIGCGAIIQTENPHELGYTPKTA-------------------------------FEKGME 35
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
T EV C RC LRHY ++DV L D DF +L++ G ++++
Sbjct: 36 TGEV-------YCQRCFRLRHYNDIQDVQ----LTDDDF-----LRLLNGLGTEDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + + D V+LV K+D+LP SL +
Sbjct: 80 VVDIFDFNGSLIPGLHRFIGDNP-----------------VLLVGNKVDILPKSLKKPKM 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R+RA E G+ + L S K ++ L+D + R +V+ +G N GKSTL
Sbjct: 123 VQWMRERAHEAGLRPVDVL-LTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I + + + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIQ----------QTVGVQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ K++ KE+KP+ Y++ A ++ + GL R D + + S + S
Sbjct: 229 QMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH KT A EKH G LQPP ++ V E + VR EF V DI A
Sbjct: 287 LKLHRTKTATADAFYEKHVGGLLQPPRADE-VAEFPELVRFEFSV------KEKTDIVFA 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V G A W +GVD++ R AL+
Sbjct: 340 GLGWITVTEPGVVA--GWAPKGVDVLRRKALI 369
>gi|366052989|ref|ZP_09450711.1| GTPase YqeH [Lactobacillus suebicus KCTC 3549]
Length = 374
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 203/452 (44%), Gaps = 88/452 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q +P GY + ++++KG N
Sbjct: 11 ICIGCGATIQSDDPNKIGYTPK-----------------------SAIQKG-----LDNN 42
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
E + C RC LRHY ++ V+ L D DF R L A ++++
Sbjct: 43 E----------LYCQRCFRLRHYNEIAPVS----LTDDDF----LRLLNQIRDANALIVY 84
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + V D V+LV K DLLP SL T+
Sbjct: 85 VVDIFDFNGSIIPGLHRFVGDNP-----------------VLLVGNKEDLLPRSLRRTKL 127
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+RQ+ +GI + + VSA KN + SL++ + GKR +V+ +G N GKSTL
Sbjct: 128 TDWMRQQTNANGIRPV-DVTLVSAKKNHQISSLLELIEKHRGKR-DVYVVGVTNVGKSTL 185
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I + + + +T + PGTTL ++E L +L DTPG++HP+
Sbjct: 186 INQIIR----------QTTGVQELITTSRFPGTTLD--KIEIPLDDGKQLVDTPGIIHPD 233
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L + K V KE+KPRT+++ +I + G+ R D I +
Sbjct: 234 QMAHVLPADALKYVAPQKEIKPRTFQLNEQQTIFLGGVARFDYVRGDRNGI--VAYFDNN 291
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K ENA +KH G L PP GE + + + R EFH+ S D+
Sbjct: 292 LNLHRTKLENADAFYDKHVGGLLTPP-GENELNDFPELERHEFHLEQKS------DLVIE 344
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V G + W +GV +++R A++
Sbjct: 345 GLGWITV--PGNTTIAGWAPKGVSVIVRRAMI 374
>gi|25011748|ref|NP_736143.1| GTP-binding protein YqeH [Streptococcus agalactiae NEM316]
gi|77414364|ref|ZP_00790520.1| GTP-binding protein [Streptococcus agalactiae 515]
gi|24413288|emb|CAD47367.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159599|gb|EAO70754.1| GTP-binding protein [Streptococcus agalactiae 515]
Length = 372
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 205/453 (45%), Gaps = 88/453 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q N GY R + L+KG E
Sbjct: 6 CIGCGARIQTENKDAAGYTPRAA-----------------------LEKG--------LE 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ DV + D + L + ++V+ V
Sbjct: 35 TGEL-------YCQRCFRLRHYNEITDVHIT--------DDEFLKLLHEVGDSDALVVNV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+GS +++ V+ GN V+LV K D+LP S+ +
Sbjct: 80 IDIFDFNGSIIPGLSRFVA---------------GN--DVLLVGNKKDILPKSVKDGKVT 122
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ +RA E+G+ + + SA + +K LID + R +V+ +G N GKSTL+
Sbjct: 123 QWLTERAHEEGLRPVDVI-LTSAQNHHAIKDLIDTIEKYRHGR-DVYVVGVTNVGKSTLI 180
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + + R +T + PGTTL ++E L + +FDTPG++H +Q
Sbjct: 181 NAIIREITGSR----------DVITTSRFPGTTLD--KIEIPLDDGSYIFDTPGIIHRHQ 228
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ LT + K V+ KE+KP+TY++ + ++ +AGL R D + T + L
Sbjct: 229 MAHYLTAKNLKYVSPKKEIKPKTYQLNSEQTLFLAGLARFDFISGQKQGF--TAYFDNNL 286
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A KH G+ L PP G K V + K VR EF + + +DI +G
Sbjct: 287 NLHRTKLVGADEFYTKHVGKLLTPPTG-KEVSDFPKLVRHEFTI------KNKMDIVYSG 339
Query: 504 LGWFSVRLKGE--AALGVWTYEGVDIVLRNALL 534
LGW V+ + E + W EGV +VLR AL+
Sbjct: 340 LGWIRVKSEAENPVVVAAWAPEGVAVVLRKALI 372
>gi|410595040|ref|YP_006951767.1| GTP-binding protein, riobosome biogenesis, YqeH [Streptococcus
agalactiae SA20-06]
gi|421532122|ref|ZP_15978491.1| GTPase YqeH [Streptococcus agalactiae STIR-CD-17]
gi|403642630|gb|EJZ03456.1| GTPase YqeH [Streptococcus agalactiae STIR-CD-17]
gi|410518679|gb|AFV72823.1| GTP-binding protein, riobosome biogenesis, YqeH [Streptococcus
agalactiae SA20-06]
Length = 372
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 136/453 (30%), Positives = 204/453 (45%), Gaps = 88/453 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q N GY R + L+KG E
Sbjct: 6 CIGCGARIQTENKDAAGYTPRAA-----------------------LEKG--------LE 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ DV V D + L + ++V+ V
Sbjct: 35 TGEL-------YCQRCFRLRHYNEITDVHVT--------DDEFLKLLHEVGDSDALVVNV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+GS +++ V+ GN V+LV K D+LP S+ +
Sbjct: 80 IDIFDFNGSIIPGLSRFVA---------------GN--DVLLVGNKKDILPKSVKDGKVT 122
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ +RA E+G+ + + SA + +K LID + R +V+ +G N GKSTL+
Sbjct: 123 QWLTERAHEEGLRPVDVI-LTSAQNHHAIKDLIDTIEKYRHGR-DVYVVGVTNVGKSTLI 180
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + + R +T + PGTTL ++E L + +FDTPG++H +Q
Sbjct: 181 NAIIREITGSR----------DVITTSRFPGTTLD--KIEIPLDDGSYIFDTPGIIHRHQ 228
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ LT + K V+ KE+KP+TY++ + ++ +AGL R D + T + L
Sbjct: 229 MAHYLTAKNLKYVSPKKEIKPKTYQLNSEQTLFLAGLARFDFISGQKQGF--TAYFDNNL 286
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A KH G+ L PP G K V + K VR EF + +DI +G
Sbjct: 287 NLHRTKLIGADEFYTKHVGKLLTPPTG-KEVSDFPKLVRHEFTI------KDKMDIVYSG 339
Query: 504 LGWFSVRLKGE--AALGVWTYEGVDIVLRNALL 534
LGW V+ + E + W EGV +VLR AL+
Sbjct: 340 LGWIRVKSEAENPVVVAAWAPEGVAVVLRKALI 372
>gi|259047030|ref|ZP_05737431.1| ribosome biogenesis protein GTPase YqeH [Granulicatella adiacens
ATCC 49175]
gi|259036349|gb|EEW37604.1| ribosome biogenesis protein GTPase YqeH [Granulicatella adiacens
ATCC 49175]
Length = 375
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 207/452 (45%), Gaps = 87/452 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
VC GCG +Q +PK GY P LNK+ +S
Sbjct: 11 VCIGCGATIQTEDPKGTGY--TPQSALNKMLES--------------------------- 41
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
E P+ C RC LR+Y +++ + L D DF + L S + ++V+
Sbjct: 42 --------ECPLYCQRCFRLRNYNELQPAS----LTDDDF----LKMLSSIADEDALVVF 85
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD D GS + + V D ++ V K+DL P S++ R
Sbjct: 86 VVDLFDLYGSMISGLKRFVGDNP-----------------ILFVANKVDLYPKSVNRNRL 128
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+ + A+E GI + L VS K + L++ + + K + + +G N GKSTL
Sbjct: 129 KAWIERHAKEYGIKPVDTL-LVSGHKRIQIDELLEKINEYR-KGKDAYVVGVTNVGKSTL 186
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N + +S+ GE ++ T + PGTTLG + + + L DTPG++H +
Sbjct: 187 INKLIQSI-------GETGEVI---TTSQYPGTTLGQIDIP--FDEHSSLVDTPGIIHRH 234
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
QIT L +E K V KEL+P+T+++ + +I I GL+R+D E+ S T +
Sbjct: 235 QITHYLAEKEMKKVLPQKELQPKTFQLNSEQTIFIGGLIRVDYEQGERNSF--TFYTPQT 292
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+ LH K E A KH G L PP G+ ++ K V+K F + D+ A
Sbjct: 293 IDLHRTKLEKATEFYAKHAGTLLTPPTGD-NMKLYPKLVKKTFTI------KEKTDLVIA 345
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +++ G + VW+ + VD++ R +++
Sbjct: 346 GLGWVTIQKPG--TVSVWSPKEVDVIQRQSII 375
>gi|229549019|ref|ZP_04437744.1| GTP-binding protein [Enterococcus faecalis ATCC 29200]
gi|257421576|ref|ZP_05598566.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|293382471|ref|ZP_06628406.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis R712]
gi|293387145|ref|ZP_06631706.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis S613]
gi|294779514|ref|ZP_06744909.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis PC1.1]
gi|300860377|ref|ZP_07106464.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TUSoD Ef11]
gi|307268318|ref|ZP_07549699.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4248]
gi|307272112|ref|ZP_07553375.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0855]
gi|307276172|ref|ZP_07557303.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2134]
gi|307280576|ref|ZP_07561624.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0860]
gi|307289801|ref|ZP_07569737.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0411]
gi|312901412|ref|ZP_07760689.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0470]
gi|312904375|ref|ZP_07763536.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0635]
gi|312906526|ref|ZP_07765528.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis DAPTO 512]
gi|312910471|ref|ZP_07769317.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis DAPTO 516]
gi|312951126|ref|ZP_07770031.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0102]
gi|384514140|ref|YP_005709233.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis OG1RF]
gi|384519605|ref|YP_005706910.1| GTPase [Enterococcus faecalis 62]
gi|397701049|ref|YP_006538837.1| GTPase [Enterococcus faecalis D32]
gi|421512806|ref|ZP_15959601.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Enterococcus faecalis ATCC 29212]
gi|422690220|ref|ZP_16748278.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0630]
gi|422691066|ref|ZP_16749105.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0031]
gi|422693689|ref|ZP_16751697.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4244]
gi|422697540|ref|ZP_16755476.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1346]
gi|422706087|ref|ZP_16763792.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0043]
gi|422709128|ref|ZP_16766641.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0027]
gi|422726077|ref|ZP_16782532.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0312]
gi|422731150|ref|ZP_16787525.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0645]
gi|422734052|ref|ZP_16790349.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1341]
gi|424757360|ref|ZP_18185109.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis R508]
gi|428767963|ref|YP_007154074.1| GTP-binding protein YqeH [Enterococcus faecalis str. Symbioflor 1]
gi|430359132|ref|ZP_19425748.1| nitric-oxide synthase [Enterococcus faecalis OG1X]
gi|430370883|ref|ZP_19429290.1| nitric-oxide synthase [Enterococcus faecalis M7]
gi|229305812|gb|EEN71808.1| GTP-binding protein [Enterococcus faecalis ATCC 29200]
gi|257163400|gb|EEU93360.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|291080155|gb|EFE17519.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis R712]
gi|291083416|gb|EFE20379.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis S613]
gi|294453393|gb|EFG21800.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis PC1.1]
gi|300849416|gb|EFK77166.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TUSoD Ef11]
gi|306499135|gb|EFM68614.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0411]
gi|306503942|gb|EFM73159.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0860]
gi|306507166|gb|EFM76305.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2134]
gi|306511228|gb|EFM80235.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0855]
gi|306515344|gb|EFM83878.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4248]
gi|310627469|gb|EFQ10752.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis DAPTO 512]
gi|310630902|gb|EFQ14185.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0102]
gi|310632274|gb|EFQ15557.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0635]
gi|311289243|gb|EFQ67799.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis DAPTO 516]
gi|311291488|gb|EFQ70044.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0470]
gi|315036287|gb|EFT48219.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0027]
gi|315148844|gb|EFT92860.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4244]
gi|315154134|gb|EFT98150.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0031]
gi|315156471|gb|EFU00488.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0043]
gi|315159003|gb|EFU03020.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0312]
gi|315162818|gb|EFU06835.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0645]
gi|315169160|gb|EFU13177.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1341]
gi|315173920|gb|EFU17937.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1346]
gi|315576864|gb|EFU89055.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0630]
gi|323481738|gb|ADX81177.1| GTPase of unknown function family protein [Enterococcus faecalis
62]
gi|327536029|gb|AEA94863.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis OG1RF]
gi|397337688|gb|AFO45360.1| GTPase of unknown function family protein [Enterococcus faecalis
D32]
gi|401674071|gb|EJS80434.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Enterococcus faecalis ATCC 29212]
gi|402407202|gb|EJV39737.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis R508]
gi|427186136|emb|CCO73360.1| GTP-binding protein YqeH [Enterococcus faecalis str. Symbioflor 1]
gi|429513487|gb|ELA03068.1| nitric-oxide synthase [Enterococcus faecalis OG1X]
gi|429515248|gb|ELA04766.1| nitric-oxide synthase [Enterococcus faecalis M7]
Length = 369
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 203/452 (44%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q NP GY + + FE E
Sbjct: 7 CIGCGAIIQTENPHELGYTPKTA-------------------------------FEKGME 35
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
T EV C RC LRHY ++DV L D DF +L++ G ++++
Sbjct: 36 TGEV-------YCQRCFRLRHYNDIQDVQ----LTDDDF-----LRLLNGLGTEDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + + D V+LV K+D+LP SL +
Sbjct: 80 VVDIFDFNGSLIPGLHRFIGDNP-----------------VLLVGNKVDILPKSLKKPKM 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R+RA E G+ + L S K ++ L+D + R +V+ +G N GKSTL
Sbjct: 123 VQWMRERAHEAGLRPVDVL-LTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I + + + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIQ----------QTVGVQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ K++ KE+KP+ Y++ A ++ + GL R D + + S + S
Sbjct: 229 QMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH KT A EKH G LQPP ++ V E + VR EF V DI A
Sbjct: 287 LNLHRTKTATADAFYEKHVGGLLQPPRADE-VAEFPELVRFEFSV------KEKTDIVFA 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V G A W +GVD++ R AL+
Sbjct: 340 GLGWITVTEPGVVA--GWAPKGVDVLRRKALI 369
>gi|433462862|ref|ZP_20420433.1| GTPase YqeH [Halobacillus sp. BAB-2008]
gi|432188318|gb|ELK45522.1| GTPase YqeH [Halobacillus sp. BAB-2008]
Length = 366
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 208/451 (46%), Gaps = 90/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q TNP GY P+ L +
Sbjct: 6 CQGCGVEIQTTNPAEAGY--APASALER-------------------------------- 31
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ ++C RC L+HY +V+DV + D DF L S +++ +
Sbjct: 32 --------EDIICKRCFRLKHYNEVQDVPYQ----DDDFLEM----LNQISATDGLIVQL 75
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GSF + ++ +GN P V+LV K+D+LP S++ + +
Sbjct: 76 VDIFDFNGSFIPGLKRL----------------TGNNP-VLLVGNKMDVLPKSVNHGKVK 118
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
HW+++ ARE+G+ ++ ++ +SA KN G+++L +D G+V+ +G N GKST +
Sbjct: 119 HWLKRSARENGL-EVEDVYLISAEKNEGIETL-SAAIDRYRNGGDVYVVGTTNVGKSTFI 176
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + + + +T + PGTTLG + + L + L+DTPG++H +Q
Sbjct: 177 NTLISNTSG----------VKDAITTSYFPGTTLGFIDIP--LDNDSSLYDTPGVIHRHQ 224
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ ++ ++ KL+ KE+KP+ Y++ ++ I GL R+D E S S + S L
Sbjct: 225 MAHYVSDKDLKLITPRKEVKPKVYQLNEEQTLFIGGLARLDFEAGSRSSF--ICYVSNEL 282
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A + + H G L PP + E+L + DI +G
Sbjct: 283 SIHRTKLEKADDLYQNHLGELLSPPDAATK-EKLPPLKGHTLKIK-----EDKTDIVFSG 336
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V +G + + EGV + LR +L+
Sbjct: 337 LGWITVP-EGGVTVQAYAPEGVKVSLRESLI 366
>gi|422863178|ref|ZP_16909810.1| GTP-binding protein [Streptococcus sanguinis SK408]
gi|327473478|gb|EGF18898.1| GTP-binding protein [Streptococcus sanguinis SK408]
Length = 368
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 192/385 (49%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVQ----LTDDDF----LRLLHEVGDSDALVVNVVDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ ++ W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKDSKVTQWLTER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LID + + K +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKDLIDKI-EYCRKGRDVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ +K+I+ T + PGTTL ++E L + ++DTPG++H +Q+ LT
Sbjct: 187 ITG-------DKDII---TTSHFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLT 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYISPKKEIKPKTYQLNPNQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
E A +KH G L PP+G+++ EE V+ EF + + DI +GLGW +
Sbjct: 293 LEGASDFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W EGV +V R A++
Sbjct: 344 RVSGPARVAGWAPEGVAVVTRKAII 368
>gi|77408261|ref|ZP_00785004.1| GTP-binding protein [Streptococcus agalactiae COH1]
gi|339300938|ref|ZP_08650063.1| GTP-binding protein [Streptococcus agalactiae ATCC 13813]
gi|421148017|ref|ZP_15607689.1| GTPase YqeH [Streptococcus agalactiae GB00112]
gi|77173119|gb|EAO76245.1| GTP-binding protein [Streptococcus agalactiae COH1]
gi|319745586|gb|EFV97887.1| GTP-binding protein [Streptococcus agalactiae ATCC 13813]
gi|401685355|gb|EJS81363.1| GTPase YqeH [Streptococcus agalactiae GB00112]
Length = 372
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 204/453 (45%), Gaps = 88/453 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q N GY R + L+KG E
Sbjct: 6 CIGCGARIQTENKDAAGYTPRAA-----------------------LEKG--------LE 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ DV + D + L + ++V+ V
Sbjct: 35 TGEL-------YCQRCFRLRHYNEITDVHIT--------DDEFLKLLHEVGDSDALVVNV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+GS +++ V+ GN V+LV K D+LP S+ +
Sbjct: 80 IDIFDFNGSIIPGLSRFVA---------------GN--DVLLVGNKKDILPKSVKDGKVT 122
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ +RA E+G+ + + SA + +K LID + R +V+ +G N GKSTL+
Sbjct: 123 QWLTERAHEEGLRPVDVI-LTSAQNHHAIKDLIDTIEKYRHGR-DVYVVGVTNVGKSTLI 180
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + + R +T + PGTTL ++E L + +FDTPG++H +Q
Sbjct: 181 NAIIREITGSR----------DVITTSRFPGTTLD--KIEIPLDDGSYIFDTPGIIHRHQ 228
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ LT + K V+ KE+KP+TY++ + ++ +AGL R D + T + L
Sbjct: 229 MAHYLTAKNLKYVSPKKEIKPKTYQLNSEQTLFLAGLARFDFISGQKQGF--TAYFDNNL 286
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A KH G+ L PP G K V + K VR EF + +DI +G
Sbjct: 287 NLHRTKLVGADEFYTKHVGKLLTPPTG-KEVSDFPKLVRHEFTI------KDKMDIVYSG 339
Query: 504 LGWFSVRLKGE--AALGVWTYEGVDIVLRNALL 534
LGW V+ + E + W EGV +VLR AL+
Sbjct: 340 LGWIRVKSEAENPVVVAAWAPEGVAVVLRKALI 372
>gi|357238329|ref|ZP_09125666.1| ribosome biogenesis GTPase YqeH [Streptococcus ictaluri 707-05]
gi|356753052|gb|EHI70173.1| ribosome biogenesis GTPase YqeH [Streptococcus ictaluri 707-05]
Length = 372
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 185/383 (48%), Gaps = 50/383 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
+ C RC LRHY + DV + D L + ++VL V+D DF+GS
Sbjct: 38 LYCQRCFRLRHYNDITDVNIT--------DDEFLTLLHEVGDSDALVLNVIDIFDFNGSV 89
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+++ VS GN V+LV K D+LP S+ + W+ +RA E+
Sbjct: 90 IPGLSRFVS---------------GN--DVLLVGNKKDILPKSVKDGKLTQWLTERAHEE 132
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G + L SA + +K L+ + L R +V+ +G N GKSTL+NAI + +
Sbjct: 133 GFRPVDVL-LTSAQNKYAIKDLMKRIDQLRKGR-DVYVVGVTNVGKSTLINAIIQEITGN 190
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
+ +T + PGTTL ++E L + +FDTPG++H +Q+ L+ ++
Sbjct: 191 K----------DLITTSRFPGTTLD--KIEIPLDDGSFIFDTPGIIHRHQMAHYLSAKDL 238
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
K V+ KE+KP+TY++ S+ + GL R D + T + L LH K E A
Sbjct: 239 KYVSPKKEIKPKTYQLNPEQSLFLGGLGRFDFINGDRQGF--TAFFDNNLLLHRTKLEGA 296
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
T EKH G L PP G+K V + K VR EF + +DI +GLGW ++
Sbjct: 297 STFYEKHLGTLLTPP-GKKEVADFPKLVRHEFTI------DDKMDIVFSGLGWIRIQANK 349
Query: 514 EAA--LGVWTYEGVDIVLRNALL 534
E+ + W EGV +++R AL+
Sbjct: 350 ESKTRVAAWAPEGVAVLVRKALI 372
>gi|422824158|ref|ZP_16872346.1| GTP-binding protein [Streptococcus sanguinis SK405]
gi|422856095|ref|ZP_16902753.1| GTP-binding protein [Streptococcus sanguinis SK1]
gi|422866065|ref|ZP_16912690.1| GTP-binding protein [Streptococcus sanguinis SK1058]
gi|324993485|gb|EGC25405.1| GTP-binding protein [Streptococcus sanguinis SK405]
gi|327461756|gb|EGF08087.1| GTP-binding protein [Streptococcus sanguinis SK1]
gi|327489041|gb|EGF20836.1| GTP-binding protein [Streptococcus sanguinis SK1058]
Length = 368
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 192/385 (49%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVQ----LTDDDF----LRLLHEVGDSDALVVNVVDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ ++ W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKDSKVTQWLTER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LID + + K +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKDLIDKI-EYCRKGRDVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ +K+I+ T + PGTTL ++E L + ++DTPG++H +Q+ LT
Sbjct: 187 ITG-------DKDII---TTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLT 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYISPKKEIKPKTYQLNPNQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
E A +KH G L PP+G+++ EE V+ EF + + DI +GLGW +
Sbjct: 293 LEGASDFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W EGV +V R A++
Sbjct: 344 RVSGPARVAGWAPEGVAVVTRKAII 368
>gi|55823525|ref|YP_141966.1| GTP-binding protein YqeH [Streptococcus thermophilus CNRZ1066]
gi|116628312|ref|YP_820931.1| GTP-binding protein YqeH [Streptococcus thermophilus LMD-9]
gi|386087223|ref|YP_006003097.1| Ribosome biogenesis GTPase YqeH [Streptococcus thermophilus ND03]
gi|386345319|ref|YP_006041483.1| hypothetical protein STH8232_1866 [Streptococcus thermophilus JIM
8232]
gi|387910325|ref|YP_006340631.1| GTP-binding protein YqeH [Streptococcus thermophilus MN-ZLW-002]
gi|445382105|ref|ZP_21427172.1| GTPase YqeH [Streptococcus thermophilus MTCC 5460]
gi|445394858|ref|ZP_21428906.1| GTPase YqeH [Streptococcus thermophilus MTCC 5461]
gi|55739510|gb|AAV63151.1| conserved hypothetical protein [Streptococcus thermophilus
CNRZ1066]
gi|116101589|gb|ABJ66735.1| Predicted GTPase [Streptococcus thermophilus LMD-9]
gi|312278936|gb|ADQ63593.1| Ribosome biogenesis GTPase YqeH [Streptococcus thermophilus ND03]
gi|339278780|emb|CCC20528.1| hypothetical protein STH8232_1866 [Streptococcus thermophilus JIM
8232]
gi|387575260|gb|AFJ83966.1| GTP-binding protein YqeH [Streptococcus thermophilus MN-ZLW-002]
gi|444748731|gb|ELW73685.1| GTPase YqeH [Streptococcus thermophilus MTCC 5461]
gi|444748809|gb|ELW73759.1| GTPase YqeH [Streptococcus thermophilus MTCC 5460]
Length = 372
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 201/396 (50%), Gaps = 56/396 (14%)
Query: 145 SEVKKHEKP--VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
S +KK E+ + C RC LRHY ++ DV + D + L + ++V+
Sbjct: 27 SSIKKAEETGELYCQRCFRLRHYNEIVDVHIT--------DDEFLKLLHEVGDSDALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS +++ VS GN V+LV K D+LP S+ +
Sbjct: 79 VVDIFDFNGSIIPGLSRFVS---------------GN--DVLLVGNKKDILPKSVKDGKV 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + + SA + +K LI + L R +V+ +G N GKSTL
Sbjct: 122 TQWLTERAHEEGMRPVDVM-LTSAQNHHAIKELIQRIEALRKGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI K + +K+++ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIKEITG-------DKDVI---TTSRFPGTTLD--KIEIPLDDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ ++ K V+ KE+KP+TY++ AG ++ + GL R D + + T +
Sbjct: 228 QMAHYLSAKDLKYVSPKKEIKPKTYQLNAGQTLFLGGLGRFDFIDGDKQGF--TAFFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K + A +KH G L PP G K + + K VR EF + + D+ +
Sbjct: 286 LKLHRTKLDGADAFYDKHVGSLLMPP-GPKELADFPKLVRHEFTIKDKT------DVVFS 338
Query: 503 GLGWFSVRLKGEA----ALGVWTYEGVDIVLRNALL 534
GLGW +R++G+A + W EGV +V+R A++
Sbjct: 339 GLGW--IRVQGKADQPTIVAAWAPEGVGVVVRKAII 372
>gi|417847402|ref|ZP_12493370.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK1073]
gi|339457050|gb|EGP69631.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK1073]
Length = 368
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 192/382 (50%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V C RC LRHY ++ DV L D DF KL+ G + ++V+ V+D DF+GS
Sbjct: 38 VYCQRCFRLRHYNEITDVK----LTDDDF-----LKLLHEVGDSDALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + VS GN V+LV K D+LP S+ P + W+ +RA E
Sbjct: 89 VIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGKISQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ I + SA +K +ID + R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPIDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
++N++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KE+KP+TY++ ++ + GL R D E + T + L LH K E
Sbjct: 238 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIEGEKQGF--TAFFDNELKLHRTKLEG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K E+ K V+ F++ + D+ +GLGW +R+
Sbjct: 296 ASAFYDKHVGTLLTPP-NSKEKEDFPKLVQHVFNIKDKT------DLVISGLGW--IRVT 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + VW EGV +V R A++
Sbjct: 347 GTAKVAVWAPEGVAVVTRKAII 368
>gi|255971788|ref|ZP_05422374.1| nitric-oxide synthase [Enterococcus faecalis T1]
gi|255974786|ref|ZP_05425372.1| nitric-oxide synthase [Enterococcus faecalis T2]
gi|256958094|ref|ZP_05562265.1| nitric-oxide synthase [Enterococcus faecalis DS5]
gi|256960940|ref|ZP_05565111.1| nitric-oxide synthase [Enterococcus faecalis Merz96]
gi|256963921|ref|ZP_05568092.1| nitric-oxide synthase [Enterococcus faecalis HIP11704]
gi|257079982|ref|ZP_05574343.1| nitric-oxide synthase [Enterococcus faecalis JH1]
gi|257081574|ref|ZP_05575935.1| nitric-oxide synthase [Enterococcus faecalis E1Sol]
gi|257084223|ref|ZP_05578584.1| nitric-oxide synthase [Enterococcus faecalis Fly1]
gi|257091097|ref|ZP_05585458.1| nitric-oxide synthase [Enterococcus faecalis CH188]
gi|257417044|ref|ZP_05594038.1| nitric-oxide synthase [Enterococcus faecalis ARO1/DG]
gi|257420198|ref|ZP_05597192.1| nitric-oxide synthase [Enterococcus faecalis T11]
gi|255962806|gb|EET95282.1| nitric-oxide synthase [Enterococcus faecalis T1]
gi|255967658|gb|EET98280.1| nitric-oxide synthase [Enterococcus faecalis T2]
gi|256948590|gb|EEU65222.1| nitric-oxide synthase [Enterococcus faecalis DS5]
gi|256951436|gb|EEU68068.1| nitric-oxide synthase [Enterococcus faecalis Merz96]
gi|256954417|gb|EEU71049.1| nitric-oxide synthase [Enterococcus faecalis HIP11704]
gi|256988012|gb|EEU75314.1| nitric-oxide synthase [Enterococcus faecalis JH1]
gi|256989604|gb|EEU76906.1| nitric-oxide synthase [Enterococcus faecalis E1Sol]
gi|256992253|gb|EEU79555.1| nitric-oxide synthase [Enterococcus faecalis Fly1]
gi|256999909|gb|EEU86429.1| nitric-oxide synthase [Enterococcus faecalis CH188]
gi|257158872|gb|EEU88832.1| nitric-oxide synthase [Enterococcus faecalis ARO1/DG]
gi|257162026|gb|EEU91986.1| nitric-oxide synthase [Enterococcus faecalis T11]
Length = 375
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 203/452 (44%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q NP GY + + FE E
Sbjct: 13 CIGCGAIIQTENPHELGYTPKTA-------------------------------FEKGME 41
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
T EV C RC LRHY ++DV L D DF +L++ G ++++
Sbjct: 42 TGEV-------YCQRCFRLRHYNDIQDVQ----LTDDDF-----LRLLNGLGTEDALIVN 85
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + + D V+LV K+D+LP SL +
Sbjct: 86 VVDIFDFNGSLIPGLHRFIGDNP-----------------VLLVGNKVDILPKSLKKPKM 128
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R+RA E G+ + L S K ++ L+D + R +V+ +G N GKSTL
Sbjct: 129 VQWMRERAHEAGLRPVDVL-LTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKSTL 186
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I + + + +T + PGTTL ++E L L DTPG++H +
Sbjct: 187 INQIIQ----------QTVGVQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 234
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ K++ KE+KP+ Y++ A ++ + GL R D + + S + S
Sbjct: 235 QMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSND 292
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH KT A EKH G LQPP ++ V E + VR EF V DI A
Sbjct: 293 LNLHRTKTATADAFYEKHVGGLLQPPRADE-VAEFPELVRFEFSV------KEKTDIVFA 345
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V G A W +GVD++ R AL+
Sbjct: 346 GLGWITVTEPGVVA--GWAPKGVDVLRRKALI 375
>gi|402815729|ref|ZP_10865321.1| ribosome biogenesis GTPase YqeH [Paenibacillus alvei DSM 29]
gi|402506769|gb|EJW17292.1| ribosome biogenesis GTPase YqeH [Paenibacillus alvei DSM 29]
Length = 372
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 204/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q NP+ GY P++ L +
Sbjct: 10 CSGCGAELQIENPEASGYV--PAKALERT------------------------------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
PV+C RC +++Y + V FD +L+ G ++V+
Sbjct: 37 ---------PVICQRCFRIKNYNEAISVA---------FDQDEFLRLLGRIGEEDALVIH 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
+VD DFDGS + + V GN P V+LVV KIDLLP + R
Sbjct: 79 IVDLFDFDGSIISGLQRFV----------------GNNP-VLLVVNKIDLLPKVTNWNRM 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+WV+++A+E GI +I + VSA +N G LI+ V D G R +V+ +GA N GKSTL
Sbjct: 122 INWVQRQAKEHGI-RIVDIALVSAKRNLGFDRLIEQVADWRGDR-DVYVVGATNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N + + + ++ LT + PGTTL ++ + L + DTPG+++ +
Sbjct: 180 INRLIR----------DYSDLDGELTTSRYPGTTLDMIHIP--LDDGKHIIDTPGIVYKS 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
++T +RE+ + +K LKP Y++ G ++ R D E +S T + S
Sbjct: 228 RLTELASREDLSALLPDKSLKPAVYQLNEGQTLFFGAFARFDFVEGERQSF--TCYLSND 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
LP+H K E A + H G L PP E R++EL W + +F + + D+ +
Sbjct: 286 LPIHRTKLERADELYRDHRGELLAPPTRE-RIDELPAWTKHQFRIG----RGGATDVFIS 340
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW A + V +GV ++ R++L+
Sbjct: 341 GLGWIKCNGTTGALVEVHAPKGVKVLARHSLI 372
>gi|421766272|ref|ZP_16203047.1| GTP-binding protein YqeH [Lactococcus garvieae DCC43]
gi|407625279|gb|EKF51990.1| GTP-binding protein YqeH [Lactococcus garvieae DCC43]
Length = 375
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 127/388 (32%), Positives = 197/388 (50%), Gaps = 52/388 (13%)
Query: 148 KKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLMVVDA 206
+ + + C RC LRHY ++ DV+ L D DF +L+S G ++++ VVD
Sbjct: 39 RGEDDALYCQRCFRLRHYNEIADVS----LTDDDF-----LRLLSEIGEHDALIVNVVDI 89
Query: 207 ADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWV 266
DF+GS + + +GN ++LV K D+LP SL + W+
Sbjct: 90 FDFNGSLIPSLHRF----------------TGN-NDLLLVANKKDILPHSLKVGKMTAWL 132
Query: 267 RQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAI 326
+++A++ G+ + L V++ KN + + ++ K +V+ +G N GKSTL+NAI
Sbjct: 133 KEQAKKAGLRPLDVL--VTSAKNQEDVRELMEKIERRRKGRDVYVVGVTNVGKSTLINAI 190
Query: 327 AKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITT 386
K V + N++ T + PGTTL ++E L + L DTPG++H Q+
Sbjct: 191 IKLVTG-------DDNVI---TTSRFPGTTLD--KIEIPLDDDSLLIDTPGIIHRGQMAH 238
Query: 387 RLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLH 446
L ++ KLV+ KE+KP+TY++ AG ++ + GL R D + + + TV+ L +H
Sbjct: 239 YLEAKDLKLVSPKKEIKPKTYQLNAGQTLFLGGLARFDYIKGEKQGL--TVFCDNELNIH 296
Query: 447 MGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGW 506
K + A EKH G L PP G K + K +RKEF V S DI +GLGW
Sbjct: 297 RTKLDGATEFYEKHVGSLLVPP-GAKDLAAFPKLIRKEFSVKEKS------DIVFSGLGW 349
Query: 507 FSVRLKGEAALGVWTYEGVDIVLRNALL 534
V +G A W EGVD+VLR AL+
Sbjct: 350 IRVAERGVVA--AWVPEGVDVVLRKALV 375
>gi|94993651|ref|YP_601749.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS10750]
gi|94547159|gb|ABF37205.1| GTP-binding protein [Streptococcus pyogenes MGAS10750]
Length = 372
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 216/455 (47%), Gaps = 92/455 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ +Q + + G+ P+ +LKKG E
Sbjct: 6 CIGCGIQIQTEDKEKAGF--TPAA---------------------ALKKG--------ME 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ DV + D R L + ++V+ V
Sbjct: 35 TGEL-------YCQRCFRLRHYNEITDVHIT--------DDEFLRLLHEVGDSDALVVNV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+GS +++ +S GN V+LV K D+LP S+ +
Sbjct: 80 IDIFDFNGSIIPGLSRFIS---------------GN--DVLLVGNKKDILPKSVKDGKVT 122
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ +RA E+G+ + + SA + +K LI+ + +L R +V+ +G N GKSTL+
Sbjct: 123 QWLTERAHEEGLRPLDVM-LTSAQNKYAIKDLIERINELRNGR-DVYVVGVTNVGKSTLI 180
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + + +K+++ T + PGTTL ++E L + +FDTPG++H +Q
Sbjct: 181 NAIIQEITG-------DKDVI---TTSRFPGTTLD--KIEIPLDDGSFIFDTPGIIHRHQ 228
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ +E K+V+ KE+KP+TY++ + ++ + GL R D + T + L
Sbjct: 229 MAHYLSPKELKIVSPKKEIKPKTYQLNSEQTLFLGGLSRFDFINGERQGF--TAFFDNQL 286
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K + A +KH G L PP G+K + K VR EF + +DI +G
Sbjct: 287 ELHRTKLDGADAFYDKHVGTLLTPP-GKKELTAFPKLVRHEFTI------DQKMDIVFSG 339
Query: 504 LGWFSVRLKGE----AALGVWTYEGVDIVLRNALL 534
LGW +R+ G+ A + W EGV +++R A++
Sbjct: 340 LGW--IRVNGQKDSKAIVAAWAPEGVAVIVRKAII 372
>gi|295113743|emb|CBL32380.1| ribosome biogenesis GTPase YqeH [Enterococcus sp. 7L76]
Length = 369
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 203/452 (44%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q NP GY + + FE E
Sbjct: 7 CIGCGAIIQTENPHELGYTPKTA-------------------------------FEKGME 35
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
T E+ C RC LRHY ++DV L D DF +L++ G ++++
Sbjct: 36 TGEI-------YCQRCFRLRHYNDIQDVQ----LTDDDF-----LRLLNGLGTEDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + + D V+LV K+D+LP SL +
Sbjct: 80 VVDIFDFNGSLIPGLHRFIGDNP-----------------VLLVGNKVDILPKSLKKPKM 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R+RA E G+ + L S K ++ L+D + R +V+ +G N GKSTL
Sbjct: 123 VQWMRERAHEAGLRPVDVL-LTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I + + + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIQ----------QTVGVQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ K++ KE+KP+ Y++ A ++ + GL R D + + S + S
Sbjct: 229 QMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH KT A EKH G LQPP ++ V E + VR EF V DI A
Sbjct: 287 LNLHRTKTATADAFYEKHVGGLLQPPRADE-VAEFPELVRFEFSV------KEKTDIVFA 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V G A W +GVD++ R AL+
Sbjct: 340 GLGWITVTEPGVVA--GWAPKGVDVLRRKALI 369
>gi|55821597|ref|YP_140039.1| GTP-binding protein YqeH [Streptococcus thermophilus LMG 18311]
gi|55737582|gb|AAV61224.1| conserved hypothetical protein [Streptococcus thermophilus LMG
18311]
Length = 372
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 198/394 (50%), Gaps = 52/394 (13%)
Query: 145 SEVKKHEKP--VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
S +KK E+ + C RC LRHY ++ DV + D + L + ++V+
Sbjct: 27 SSIKKAEETGELYCQRCFRLRHYNEIVDVHIT--------DDEFLKLLYEVGDSDALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS +++ VS GN V+LV K D+LP S+ +
Sbjct: 79 VVDIFDFNGSIIPGLSRFVS---------------GN--DVLLVGNKKDILPKSVKDGKV 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + + SA + +K LI + L R +V+ +G N GKSTL
Sbjct: 122 TQWLTERAHEEGMRPVDVM-LTSAQNHHAIKELIQRIEALRKGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI K + +K+++ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIKEITG-------DKDVI---TTSRFPGTTLD--KIEIPLDDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ ++ K V+ KE+KP+TY++ AG ++ + GL R D + + T +
Sbjct: 228 QMAHYLSAKDLKYVSPKKEIKPKTYQLNAGQTLFLGGLGRFDFIDGDKQGF--TAFFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K + A +KH G L PP G K + + K VR EF + + D+ +
Sbjct: 286 LKLHRTKLDGADAFYDKHVGSLLMPP-GPKELADFPKLVRHEFTIKDKT------DVVFS 338
Query: 503 GLGWFSVRLKGE--AALGVWTYEGVDIVLRNALL 534
GLGW V+ K + + W EGV +V+R A++
Sbjct: 339 GLGWIRVQGKTDQPTIVAAWAPEGVGVVVRKAII 372
>gi|422699648|ref|ZP_16757511.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1342]
gi|315171886|gb|EFU15903.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1342]
Length = 369
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 203/452 (44%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q NP GY + + FE E
Sbjct: 7 CIGCGAIIQTENPHELGYTPKTA-------------------------------FEKGME 35
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
T EV C RC LRHY ++DV L D DF +L++ G ++++
Sbjct: 36 TGEV-------YCQRCFRLRHYNDIQDVQ----LTDDDF-----LRLLNGLGTEDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + + D V+LV K+D+LP SL +
Sbjct: 80 VVDIFDFNGSLIPGLHRFIGDNP-----------------VLLVGNKVDILPKSLKKPKM 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R+RA E G+ + L S K ++ L+D + R +V+ +G N GKSTL
Sbjct: 123 VQWMRERAHEAGLRPVDVL-LTSGKKPEEMQELLDTIEKYREGR-DVYVVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I + + + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIQ----------QTVGVQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ K++ KE+KP+ Y++ A ++ + GL R D + + S + S
Sbjct: 229 QMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH KT A EKH G LQPP ++ V E + VR EF V DI A
Sbjct: 287 LNLHRTKTATADAFYEKHVGGLLQPPRADE-VAEFPELVRFEFSV------KEKTDIVFA 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V G A W +GVD++ R AL+
Sbjct: 340 GLGWITVTEPGVVA--GWAPKGVDVLRRKALI 369
>gi|417793547|ref|ZP_12440821.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK255]
gi|334272686|gb|EGL91046.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK255]
Length = 368
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 191/382 (50%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V C RC LRHY ++ DV L D DF KL+ G + S+V+ V+D DF+GS
Sbjct: 38 VYCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDSLVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + VS GN V+LV K D+LP S+ P + W+ +RA E
Sbjct: 89 VIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGKISQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + + SA +K +ID + R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
++N++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KE+KP+TY++ ++ + GL R D + T + L LH K E
Sbjct: 238 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRTKLEG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A T +KH G L PP K E+ K V+ F + + D+ +GLGW +R+
Sbjct: 296 ASTFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFTIKDKT------DLVISGLGW--IRVT 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + VW EGV +V R A++
Sbjct: 347 GTAKVAVWAPEGVAVVTRKAII 368
>gi|357639081|ref|ZP_09136954.1| ribosome biogenesis GTPase YqeH [Streptococcus urinalis 2285-97]
gi|418417147|ref|ZP_12990345.1| ribosome biogenesis GTPase YqeH [Streptococcus urinalis
FB127-CNA-2]
gi|357587535|gb|EHJ56943.1| ribosome biogenesis GTPase YqeH [Streptococcus urinalis 2285-97]
gi|410873203|gb|EKS21139.1| ribosome biogenesis GTPase YqeH [Streptococcus urinalis
FB127-CNA-2]
Length = 370
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 204/451 (45%), Gaps = 86/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T+ + GY + + L+KG E
Sbjct: 6 CIGCGAKIQTTDKEKAGYTPKAA-----------------------LEKG--------ME 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ DV + D L + ++V+ V
Sbjct: 35 TGEL-------YCQRCFRLRHYNEIVDVNIT--------DDEFLTLLHEVGDSDALVVNV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS +++ +S GN V+LV K D+LP S+ +
Sbjct: 80 VDIFDFNGSVIPGLSRFIS---------------GN--DVLLVGNKKDILPKSVKNQKVT 122
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ +RA E+G+ + + SA N +K LI + L R +V+ +G N GKSTL+
Sbjct: 123 QWLTERAHEEGMRPLDVI-LTSAQNNEAIKELITKINQLRKGR-DVYVVGVTNVGKSTLI 180
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + + +K+++ T + PGTTL ++E L + +FDTPG++H +Q
Sbjct: 181 NAIIQEITG-------DKDVI---TTSRFPGTTLD--KIEIPLDDGSFIFDTPGIIHRHQ 228
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L K ++ KE+KP+TY++ ++ +AGL R D S E T + L
Sbjct: 229 MAHYLGARNLKYISPKKEIKPKTYQLNPEQTLFLAGLARFDF--VSGEKQGFTAYFDNNL 286
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A EKH G L PP +K + E K +R EF + DI +G
Sbjct: 287 KIHRTKLEGATAFYEKHVGHLLVPPT-DKELSEFPKLIRHEFTI------HEKTDIVYSG 339
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW V K + W EGV +++R AL+
Sbjct: 340 LGWIRVNPKSATVVAAWAPEGVSVIIRKALI 370
>gi|358464171|ref|ZP_09174137.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 058
str. F0407]
gi|357067199|gb|EHI77325.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 058
str. F0407]
Length = 368
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 140/453 (30%), Positives = 212/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS +++ VS GN V+LV K D+LP S+ P +
Sbjct: 78 NVIDIFDFNGSVIPGLSRFVS---------------GN--DVLLVGNKKDILPKSVKPGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLVERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L A ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGAYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ + ++ + GL R D S E T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNSEQTLFLGGLGRFDF--ISGEKQGFTAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ K V+ F + + D+
Sbjct: 285 ELKLHRTKLEGASAFYDKHLGILLTPP-NSKEKEDFPKLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWVPEGVAVVTRKAII 368
>gi|410456867|ref|ZP_11310718.1| GTPase YqeH [Bacillus bataviensis LMG 21833]
gi|409927249|gb|EKN64392.1| GTPase YqeH [Bacillus bataviensis LMG 21833]
Length = 368
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 213/453 (47%), Gaps = 92/453 (20%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCGV +Q NP+ GY P+ L K
Sbjct: 7 LCMGCGVKVQTENPEDLGY--APASALEK------------------------------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
+ ++C RC L+HY +V+DV L D DF K+++ G ++++
Sbjct: 34 ---------ETIICQRCFRLKHYNEVQDVN----LTDDDF-----LKILNEMGRTDALIV 75
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
M+VD DF+GS+ + + V +V+LV K+DLLP S+ +
Sbjct: 76 MIVDIFDFNGSWLPGLHRFVGHN-----------------KVLLVGNKVDLLPKSVKHNK 118
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
HW++ A+E G+ + ++ VSA K +K + +L + +V+ +G N GKST
Sbjct: 119 LIHWMKHEAKELGL-RPEEVFLVSAAKGVNVKETAAAIDELRNGK-DVYVVGCTNVGKST 176
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
+N I K V E +++ T + PGTTL I+++ L + L D+PG+++
Sbjct: 177 FINRIIKEVTG-------EADVI---TTSHFPGTTLDIIKIP--LDDEKSLIDSPGIINH 224
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ + +++ K++ KE+KP +++ G ++ GL R D S + S
Sbjct: 225 HQMAHFVDKKDLKIITPKKEIKPMVFQLNEGQTLFFGGLARFDYISGGRRSF--VCYVSN 282
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L +H KTENA + EKH G L PP G ++VE + V++EF + + DI
Sbjct: 283 ELNIHRTKTENASELYEKHVGEMLTPP-GSEQVETFPELVKQEFIIK-----EAKTDIVF 336
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +V G A + + +GV ++R +L+
Sbjct: 337 SGLGWITVNEPG-AKVAAYVPKGVQTLIRKSLI 368
>gi|322516195|ref|ZP_08069128.1| GTP-binding protein [Streptococcus vestibularis ATCC 49124]
gi|322125371|gb|EFX96726.1| GTP-binding protein [Streptococcus vestibularis ATCC 49124]
Length = 372
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 199/396 (50%), Gaps = 56/396 (14%)
Query: 145 SEVKKHEKP--VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
S +KK E+ + C RC LRHY ++ DV + D + L + ++V+
Sbjct: 27 SSIKKAEETGELYCQRCFRLRHYNEIVDVHIT--------DDEFLKLLHEVGDSDALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS +++ VS GN V+LV K D+LP S+ +
Sbjct: 79 VVDIFDFNGSIIPGLSRFVS---------------GN--DVLLVGNKKDILPKSVKDGKV 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + + SA + +K LI + L R +V+ +G N GKSTL
Sbjct: 122 TQWLTERAHEEGMRPVDVM-LTSAQNHHAIKELIQRIEKLRKGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI K + +K+I+ T + PGTTL ++E L +FDTPG++H +
Sbjct: 180 INAIIKEITG-------DKDII---TTSRFPGTTLD--KIEIPLDDGTYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ ++ K V+ KE+KP+TY++ A ++ + GL R D + + T +
Sbjct: 228 QMAHYLSAKDLKYVSPKKEIKPKTYQLNASQTLFLGGLGRFDFIDGDKQGF--TAFFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K E A +KH G L PP G K + + K VR EF + + DI +
Sbjct: 286 LKLHRTKLEGADAFYDKHVGSLLMPP-GPKDLADFPKLVRHEFTIKDKT------DIVFS 338
Query: 503 GLGWFSVRLKGEA----ALGVWTYEGVDIVLRNALL 534
GLGW +R++G+A + W EGV +V+R A++
Sbjct: 339 GLGW--IRVQGKADQPTIVAAWAPEGVGVVVRKAII 372
>gi|422867666|ref|ZP_16914236.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1467]
gi|329577181|gb|EGG58651.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1467]
Length = 375
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 203/452 (44%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q NP GY + + FE E
Sbjct: 13 CIGCGAIIQTENPHELGYTPKTA-------------------------------FEKGME 41
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
T EV C RC LRHY ++DV L D DF +L++ G ++++
Sbjct: 42 TGEV-------YCQRCFRLRHYNDIQDVQ----LTDDDF-----LRLLNGLGTEDALIVN 85
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + + D V+LV K+D+LP SL +
Sbjct: 86 VVDIFDFNGSLIPGLHRFIGDNP-----------------VLLVGNKVDILPKSLKKPKM 128
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R+RA E G+ + L S K ++ L+D + R +V+ +G N GKSTL
Sbjct: 129 VQWMRERAHEAGLRPVDVL-LTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKSTL 186
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I + + + +T + PGTTL ++E L L DTPG++H +
Sbjct: 187 VNQIIQ----------QTVGVQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 234
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ K++ KE+KP+ Y++ A ++ + GL R D + + S + S
Sbjct: 235 QMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSND 292
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH KT A EKH G LQPP ++ V E + VR EF V DI A
Sbjct: 293 LNLHRTKTATADAFYEKHVGGLLQPPRADE-VAEFPELVRFEFSV------KEKTDIVFA 345
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V G A W +GVD++ R AL+
Sbjct: 346 GLGWITVTEPGVVA--GWAPKGVDVLRRKALI 375
>gi|422879449|ref|ZP_16925915.1| GTP-binding protein [Streptococcus sanguinis SK1059]
gi|422929294|ref|ZP_16962236.1| GTP-binding protein [Streptococcus sanguinis ATCC 29667]
gi|422932265|ref|ZP_16965196.1| GTP-binding protein [Streptococcus sanguinis SK340]
gi|332366161|gb|EGJ43917.1| GTP-binding protein [Streptococcus sanguinis SK1059]
gi|339615110|gb|EGQ19793.1| GTP-binding protein [Streptococcus sanguinis ATCC 29667]
gi|339619049|gb|EGQ23639.1| GTP-binding protein [Streptococcus sanguinis SK340]
Length = 368
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 125/385 (32%), Positives = 192/385 (49%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVQ----LTDDDF----LRLLHEVGDSDALVVNVVDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ ++ W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKDSKVTQWLTER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LID + + K +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKDLIDKI-EYCRKGRDVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ +K+I+ T + PGTTL ++E L + ++DTPG++H +Q+ L+
Sbjct: 187 ITG-------DKDII---TTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLS 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K V+ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
E A +KH G L PP+G++R EE V+ EF + + DI +GLGW +
Sbjct: 293 LEGASDFYDKHVGSLLVPPVGKER-EEFPALVKHEFTIKDKT------DIVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W EGV +V R A++
Sbjct: 344 RVSGPARVAGWAPEGVAVVTRKAII 368
>gi|256763435|ref|ZP_05504015.1| nitric-oxide synthase [Enterococcus faecalis T3]
gi|256684686|gb|EEU24381.1| nitric-oxide synthase [Enterococcus faecalis T3]
Length = 375
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 203/452 (44%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q NP GY + + FE E
Sbjct: 13 CIGCGAIIQTENPHELGYTPKTA-------------------------------FEKGME 41
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
T E+ C RC LRHY ++DV L D DF +L++ G ++++
Sbjct: 42 TGEI-------YCQRCFRLRHYNDIQDVQ----LTDDDF-----LRLLNGLGTEDALIVN 85
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + + D V+LV K+D+LP SL +
Sbjct: 86 VVDIFDFNGSLIPGLHRFIGDNP-----------------VLLVGNKVDILPKSLKKPKM 128
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R+RA E G+ + L S K ++ L+D + R +V+ +G N GKSTL
Sbjct: 129 VQWMRERAHEAGLRPVDVL-LTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKSTL 186
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I + + + +T + PGTTL ++E L L DTPG++H +
Sbjct: 187 INQIIQ----------QTVGVQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 234
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ K++ KE+KP+ Y++ A ++ + GL R D + + S + S
Sbjct: 235 QMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSND 292
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH KT A EKH G LQPP ++ V E + VR EF V DI A
Sbjct: 293 LNLHRTKTATADAFYEKHVGGLLQPPRADE-VAEFPELVRFEFSV------KEKTDIVFA 345
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V G A W +GVD++ R AL+
Sbjct: 346 GLGWITVTEPGVVA--GWAPKGVDVLRRKALI 375
>gi|227519403|ref|ZP_03949452.1| GTP-binding protein [Enterococcus faecalis TX0104]
gi|424678029|ref|ZP_18114874.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV103]
gi|424679267|ref|ZP_18116094.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV116]
gi|424682894|ref|ZP_18119652.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV129]
gi|424686799|ref|ZP_18123464.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV25]
gi|424692181|ref|ZP_18128694.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV31]
gi|424692416|ref|ZP_18128905.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV37]
gi|424696110|ref|ZP_18132475.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV41]
gi|424699535|ref|ZP_18135748.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV62]
gi|424704721|ref|ZP_18140815.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV63]
gi|424706899|ref|ZP_18142894.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV65]
gi|424717576|ref|ZP_18146858.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV68]
gi|424720418|ref|ZP_18149521.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV72]
gi|424726104|ref|ZP_18154788.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV73]
gi|424734049|ref|ZP_18162599.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV81]
gi|424738078|ref|ZP_18166523.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV85]
gi|424755413|ref|ZP_18183290.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV93]
gi|227073157|gb|EEI11120.1| GTP-binding protein [Enterococcus faecalis TX0104]
gi|402352576|gb|EJU87421.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV103]
gi|402357395|gb|EJU92105.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV116]
gi|402360424|gb|EJU95024.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV31]
gi|402366220|gb|EJV00614.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV129]
gi|402366736|gb|EJV01097.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV25]
gi|402375829|gb|EJV09800.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV62]
gi|402378146|gb|EJV12025.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV37]
gi|402378563|gb|EJV12405.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV41]
gi|402381158|gb|EJV14871.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV63]
gi|402384280|gb|EJV17839.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV68]
gi|402386585|gb|EJV20090.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV65]
gi|402389753|gb|EJV23138.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV73]
gi|402390667|gb|EJV23996.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV81]
gi|402393490|gb|EJV26714.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV72]
gi|402400961|gb|EJV33765.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV93]
gi|402403484|gb|EJV36151.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV85]
Length = 369
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 203/452 (44%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q NP GY + + FE E
Sbjct: 7 CIGCGAIIQTENPHELGYTPKTA-------------------------------FEKGME 35
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
T EV C RC LRHY ++DV L D DF +L++ G ++++
Sbjct: 36 TGEV-------YCQRCFRLRHYNDIQDVQ----LTDDDF-----LRLLNGLGTEDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + + D V+LV K+D+LP SL +
Sbjct: 80 VVDIFDFNGSLIPGLHRFIGDNP-----------------VLLVGNKVDILPKSLKKPKM 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R+RA E G+ + L S K ++ L+D + R +V+ +G N GKSTL
Sbjct: 123 VQWMRERAHEAGLRPVDVL-LTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I + + + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIQ----------QTVGVQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ K++ KE+KP+ Y++ A ++ + GL R D + + S + S
Sbjct: 229 QMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH KT A EKH G LQPP ++ V E + VR EF V DI A
Sbjct: 287 LNLHRTKTATADAFYEKHVGGLLQPPRTDE-VAEFPELVRFEFSV------KEKTDIVFA 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V G A W +GVD++ R AL+
Sbjct: 340 GLGWITVTEPGVVA--GWAPKGVDVLRRKALI 369
>gi|450145066|ref|ZP_21874391.1| GTP-binding protein YqeH [Streptococcus mutans 1ID3]
gi|449149787|gb|EMB53574.1| GTP-binding protein YqeH [Streptococcus mutans 1ID3]
Length = 368
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 204/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGY--TPKSALEK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ DV + D DF KL+ G +R++V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + +S + ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSVIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSGKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + L SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLMERAHEEGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 228 QMAHYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLAGADAFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + W E V +V R AL+
Sbjct: 339 GLGW--IRINGRAKIAAWAPEEVAVVTRKALI 368
>gi|417922946|ref|ZP_12566429.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK569]
gi|342837476|gb|EGU71661.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK569]
Length = 368
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 139/453 (30%), Positives = 212/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ + ++ + GL R D S E T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNSEQTLFLGGLGRFDF--ISGEKQGFTAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ K V+ F++ + D+
Sbjct: 285 ELKLHRTKLEGASAFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFNIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|322386055|ref|ZP_08059694.1| GTP-binding protein [Streptococcus cristatus ATCC 51100]
gi|417922565|ref|ZP_12566053.1| ribosome biogenesis GTPase YqeH [Streptococcus cristatus ATCC
51100]
gi|321269899|gb|EFX52820.1| GTP-binding protein [Streptococcus cristatus ATCC 51100]
gi|342832662|gb|EGU66957.1| ribosome biogenesis GTPase YqeH [Streptococcus cristatus ATCC
51100]
Length = 368
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 192/385 (49%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVQ----LTDDDF----LRLLHEVGDSDALVVNVVDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ ++ W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKDSKVTQWLTER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LID + R +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ +K+++ T + PGTTL ++E L + ++DTPG++H +Q+ L+
Sbjct: 187 ITG-------DKDVI---TTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLS 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K V+ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
E A +KH G L PP+G+++ EE V+ EF + + DI +GLGW +
Sbjct: 293 LEGASGFYDKHVGSLLVPPVGKEK-EEFPSLVKHEFTIKDKT------DIVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ A + W +GVD+VLR A++
Sbjct: 344 RVNDRAKVAAWAPKGVDVVLRKAII 368
>gi|365902898|ref|ZP_09440721.1| GTPase YqeH [Lactobacillus malefermentans KCTC 3548]
Length = 378
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 144/452 (31%), Positives = 207/452 (45%), Gaps = 89/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T+ PGY ES +LKKG EN
Sbjct: 15 CIGCGAKIQTTDRDAPGY-------------------TPES----ALKKG------MENN 45
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLM 202
+ C RC LRHY ++ V L D DF KL+S A ++++
Sbjct: 46 E---------LYCQRCFRLRHYNEIVPVG----LTDDDF-----LKLLSQIRDADALIVY 87
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + V GN P V+LV K D+LP SL ++
Sbjct: 88 VMDIFDFNGSVIPGLHRFV----------------GNNP-VLLVGNKEDILPKSLRRSKL 130
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+RQRA E GI I + VSA N + SL+ + D K +V+ +G N GKSTL
Sbjct: 131 KDWLRQRANEAGIHPI-DVALVSAKTNQSVDSLLVQI-DKYRKNRDVYIVGVTNVGKSTL 188
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I + + G+ +T + PGTTL R+E L L DTPG++H
Sbjct: 189 INQIIRQ-NTGKA---------DLITTSRFPGTTLD--RIEIPLDDDHFLVDTPGIIHAE 236
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L + K+V K +KP+ Y++ G ++ G+ R D E TV+A
Sbjct: 237 QMAHYLNGNDLKIVTPQKSIKPKVYQLNEGQTLFFGGVARFDYENGPKNGF--TVYAENN 294
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K ENA ++ E G+ L PP E+ +E K VR E + S D+
Sbjct: 295 LYIHRTKLENADSLYEAQLGKLLSPPSTEEDIEAFPKLVRHELKTAKKS------DLVIE 348
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V +G G W EGV ++LR+A++
Sbjct: 349 GLGWVTVP-EGVVVAG-WAPEGVAVILRDAMI 378
>gi|427392284|ref|ZP_18886289.1| ribosome biogenesis GTPase YqeH [Alloiococcus otitis ATCC 51267]
gi|425731551|gb|EKU94367.1| ribosome biogenesis GTPase YqeH [Alloiococcus otitis ATCC 51267]
Length = 381
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 132/459 (28%), Positives = 206/459 (44%), Gaps = 89/459 (19%)
Query: 76 EATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGL 135
E ++ C GCG +Q +P PGY P L
Sbjct: 12 ENPDEVIYCIGCGAQLQSQDPNQPGYL--PQSALEG------------------------ 45
Query: 136 VVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG 195
+ E + C RC LRHY ++ DV V + DF + +G S
Sbjct: 46 -------------RSEDDLYCKRCFRLRHYNELADVQVTS----DDFLNMLGE----ISQ 84
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS 255
++V+ VVD D +GSF + ++ +GN P +++V K DLLP
Sbjct: 85 EEALVVNVVDILDVNGSFVPGIGRL----------------TGNNP-LIIVGNKFDLLPK 127
Query: 256 SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQ 315
SL + W+ + + + G+ + + +SAV+ + L+D + + G R +V+ +G
Sbjct: 128 SLKRGKLRQWLEEVSYDMGVKPLA-VDLISAVRQGSVAHLLDLINEYRGDR-DVYIVGTT 185
Query: 316 NAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDT 375
N GKSTL+N I +E+++V T + PGTTLG ++E L KL DT
Sbjct: 186 NVGKSTLINQIINLA-------SQEEDVV---TTSYFPGTTLG--KIEIPLDDGHKLVDT 233
Query: 376 PGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYV 435
PG+ P Q+ +L +E K V KELKPRTY++ G S+ I GL R D + ++ +
Sbjct: 234 PGIFRPGQVVHQLNPQEVKTVIPRKELKPRTYQLNPGQSLFIGGLGRFDYVQGPGKA-SI 292
Query: 436 TVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSS 495
V+A+P L +H K E A + + G+ L PP K + L K + F V +S
Sbjct: 293 VVYAAPSLSIHRTKREKADDLYQSQLGKDLTPPFDSKDKKTLTK---RTFKVDQAS---- 345
Query: 496 SVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
D+ +GLGW + G G +G DI +R ++
Sbjct: 346 --DLVYSGLGWVKINASGVEVEG-HIIQGADIFIRKPMI 381
>gi|229918235|ref|YP_002886881.1| GTP-binding protein YqeH [Exiguobacterium sp. AT1b]
gi|229469664|gb|ACQ71436.1| Nitric-oxide synthase [Exiguobacterium sp. AT1b]
Length = 370
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 138/452 (30%), Positives = 214/452 (47%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q +P GY P L++
Sbjct: 8 CAGCGVAIQTEDPNGVGY--APKSALDR-------------------------------- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L+HY +V+DV L D DF R L S ++V+ +
Sbjct: 34 --------EIVICQRCFKLKHYNQVQDVE----LSDDDF----LRILNGISSKEALVIKI 77
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V G+ P V+LV K+DLLP S++P R
Sbjct: 78 VDIFDFNGSWLPGLQRSV----------------GSNP-VLLVGNKVDLLPKSVNPNRMA 120
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+W++ A+E G++ I +H +SA K G+ L + + + K +V+ +G N GKSTL+
Sbjct: 121 NWMKAEAKELGLNPI-DVHLISAKKGHGIDELAEKI-EYYRKGKDVFVVGCTNVGKSTLI 178
Query: 324 NAIAKSVDAGRGGDGEEKNI-VSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
N + K R G+ +E I VSH PGTTL ++ L A L+DTPG+++ +
Sbjct: 179 NQVIK-----RFGEEDEAIITVSHF-----PGTTL--DLIDIPLDDDANLYDTPGIINRH 226
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ + ++ K + KE+KP +++ +++ GL R+D E + S ++ S
Sbjct: 227 QMAHYVDAKDLKTITPKKEIKPHVFQLNPQQTLYFGGLARLDYLEGNKRSF--VIYMSNE 284
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L H K E A + ++H G+ L PP EK +E L VR EF S D DI +
Sbjct: 285 LKAHRTKLERADELYDQHIGKMLNPP-NEKTLEILPPLVRHEF----SLRDGVKTDIVFS 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW ++ KG + W +GV + LR AL+
Sbjct: 340 GLGWVAIHGKG-GRIAAWAPKGVAVTLREALV 370
>gi|386714891|ref|YP_006181214.1| GTPase family protein [Halobacillus halophilus DSM 2266]
gi|384074447|emb|CCG45940.1| GTPase familiy protein [Halobacillus halophilus DSM 2266]
Length = 366
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 210/451 (46%), Gaps = 90/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T+P+ PGY P L +
Sbjct: 6 CQGCGAEIQTTHPEQPGY--APPSALER-------------------------------- 31
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L+HY +V+DV ++ D + L S + +++ +
Sbjct: 32 --------EDVICKRCFRLKHYNEVQDVP-------YNADDFL-EMLHQISDTKGLIIQL 75
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GSF + ++ +GN P V+LV K+D+LP S++ + +
Sbjct: 76 VDIFDFNGSFISGLKRL----------------TGNNP-VILVGNKMDVLPKSVNHEKVK 118
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
HW+++ A+E G+ + + +SA KN G+ L +D K G+V+ +G N GKST +
Sbjct: 119 HWLKRSAKEQGLI-VEDVFLISAEKNQGITEL-SKAMDHYRKGGDVYVVGTTNVGKSTFI 176
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + + GE+ I T + PGTTLG + + L + LFDTPG++ +Q
Sbjct: 177 NTLISNTS------GEKDAI----TTSYFPGTTLGFIDIP--LDENSSLFDTPGVIQRHQ 224
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ ++ ++ K++ +E+KP+ Y++ +++ GL R+D E S S + S +
Sbjct: 225 MAHYVSEQDLKVITPRREVKPKIYQLNEAQTLYFGGLARLDFESGSRTSF--VCYFSNEI 282
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A + + H G L PP + +E+L ++ F + DI +G
Sbjct: 283 NIHRTKLEKADDLYQNHLGELLVPP-DSRTMEKLPPLKKQTFRIK-----EDKTDIVFSG 336
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V +G + V EGV + LR +L+
Sbjct: 337 LGWITVP-EGHINVTVHVPEGVKVSLRESLI 366
>gi|419767751|ref|ZP_14293898.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK579]
gi|383352793|gb|EID30426.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK579]
Length = 368
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 139/453 (30%), Positives = 210/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKSGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++NI+ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNII---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D S E T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ K ++ F++ D+
Sbjct: 285 ELKLHRTKLEGASAFYDKHLGTLLTPP-NSKEQEDFPKLIQHVFNI------KEKTDLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|383937703|ref|ZP_09990947.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudopneumoniae
SK674]
gi|418968494|ref|ZP_13520084.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383352598|gb|EID30283.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383715431|gb|EID71393.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudopneumoniae
SK674]
Length = 368
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 192/382 (50%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
+ C RC LRHY ++ DV L D DF KL+ G + ++V+ VVD DF+GS
Sbjct: 38 IYCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVVNVVDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + VS GN V+LV K D+LP S+ P + W+ +RA E
Sbjct: 89 VIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGKISQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + + SA +K +ID + R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
++N++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KE+KP+TY++ ++ + GL R D + T + L LH K E
Sbjct: 238 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRTKLEG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K E+ K V+ F++ + D+ +GLGW +R+
Sbjct: 296 ASAFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFNIKDKT------DLVISGLGW--IRVT 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + VW EGV +V+R A++
Sbjct: 347 GTAKVAVWAPEGVAVVIRKAII 368
>gi|450175542|ref|ZP_21885246.1| GTP-binding protein YqeH [Streptococcus mutans SM1]
gi|449246628|gb|EMC44927.1| GTP-binding protein YqeH [Streptococcus mutans SM1]
Length = 368
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 188/382 (49%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
+ C RC LRHY ++ DV + D DF KL+ G +R++V+ V+D DF+GS
Sbjct: 38 IYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + +S + ++LV K D+LP S+ + W+ +RA E
Sbjct: 89 VIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSGKITQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + L SA W +K LI + +L R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
+KNI+ T + PGTTL ++E L + +FDTPG++H +Q+ L+ +
Sbjct: 190 -------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRHQMAHYLSDKA 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 238 LKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKLAG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP +K + K VR EF + D+ +GLGW +R+
Sbjct: 296 ADAFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFSGLGW--IRIN 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + W E V +V R AL+
Sbjct: 347 GRAKIAAWAPERVAVVTRKALI 368
>gi|417885655|ref|ZP_12529807.1| ribosome biogenesis GTPase YqeH [Lactobacillus oris F0423]
gi|341595151|gb|EGS37826.1| ribosome biogenesis GTPase YqeH [Lactobacillus oris F0423]
Length = 372
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 138/451 (30%), Positives = 212/451 (47%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q T+P GY P+ +++K+G A +E
Sbjct: 10 CIGCGAVIQSTDPAALGY--TPA---------------------SAVKRG-----LANDE 41
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ C RC LRHY ++ V+ L D DF +G+ A ++++ V
Sbjct: 42 ----------LYCQRCFRLRHYNEIAPVS----LTDDDFLRLLGQ----IRDANALIVYV 83
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS + + V D V+LV K DLLP SL +
Sbjct: 84 VDIFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKEDLLPRSLRRPKLC 126
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ+A + GI + + VSA KN + L+ + R +V+ +G N GKSTL+
Sbjct: 127 DWIRQQANQAGIRPVDTV-LVSAKKNHEIDELLATIEKYRHDR-DVYVVGVTNVGKSTLI 184
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K + + +T + PGTTL +E L KL DTPG++HP+Q
Sbjct: 185 NQIIK----------QRTGVQDLITTSRFPGTTLD--EIEIPLDDGHKLVDTPGIIHPHQ 232
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ ++ K+V KE+KPRTY++ G ++ I G+ R D E+ S +VT + + L
Sbjct: 233 MAHVLSAKDLKIVAPQKEIKPRTYQLDPGQTVFIGGVARFDF-ETGPHSGFVTYFDN-NL 290
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K NA + EK+ G L PP E+ + + VR+EFHV+ S D+ G
Sbjct: 291 TLHRTKLSNADSFYEKYRGGLLTPPTAEE-LNDFPPLVREEFHVNEKS------DVVFEG 343
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V + W +GV ++R A++
Sbjct: 344 LGWVTV--PAGVTVAAWVPKGVAALVRKAMI 372
>gi|328957108|ref|YP_004374494.1| GTP-binding protein YqeH [Carnobacterium sp. 17-4]
gi|328673432|gb|AEB29478.1| GTP-binding protein YqeH [Carnobacterium sp. 17-4]
Length = 377
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 140/452 (30%), Positives = 213/452 (47%), Gaps = 89/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q T+ + GY P+ L K L+KG
Sbjct: 14 CIGCGAIIQTTDKEAVGY--TPASALEK-----------------GLEKG---------- 44
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
V C RC LRHY +++DV L D DF KL++ G+ ++++
Sbjct: 45 ---------EVYCQRCFRLRHYNEIQDVQ----LTDDDF-----LKLLNELGSEDALIVN 86
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + V G P V+LV K+DLLP SL +
Sbjct: 87 VIDIFDFNGSLIPGLHRFV----------------GKNP-VLLVGNKVDLLPKSLKRGKM 129
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R+RA E+G+ + + SA+K ++ L+D ++ K +V+ +G N GKSTL
Sbjct: 130 TQWLRERAHEEGL-RPEDVLLTSAMKPAEMEILLD-AIEKHRKGRDVFVVGVTNVGKSTL 187
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I KS AG + +T + PGTTL R+E L L DTPG++H +
Sbjct: 188 INQIIKST-AG---------VQDLITTSQFPGTTLD--RIEIPLDDGKNLIDTPGIIHRH 235
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L ++ KL+ KE+KP Y++ G ++ G+ R D + + S T + S
Sbjct: 236 QMAHVLGDKDLKLIAPKKEIKPIVYQLNEGQTLFFGGVARFDYLKGARHSF--TCFVSND 293
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K E A + +K G+ LQPP E V+ + VR EF V DI A
Sbjct: 294 LNIHRTKLEKADELYQKQVGKLLQPP-REDEVDGFPELVRFEFSV------KEKADIVFA 346
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V G G W +G+D+++R +L+
Sbjct: 347 GLGWVTVNEPGCVVAG-WAPKGIDVLIRKSLI 377
>gi|322373553|ref|ZP_08048089.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. C150]
gi|321278595|gb|EFX55664.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. C150]
Length = 372
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 199/396 (50%), Gaps = 56/396 (14%)
Query: 145 SEVKKHEK--PVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
S +KK E+ + C RC LRHY ++ DV + D + L + ++V+
Sbjct: 27 SSIKKAEETGDLYCQRCFRLRHYNEIVDVHIT--------DDEFLKLLHEVGDSDALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS +++ VS GN V+LV K D+LP S+ +
Sbjct: 79 VVDIFDFNGSIIPGLSRFVS---------------GN--DVLLVGNKKDILPKSVKDGKV 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + + SA + +K LI + L R +V+ +G N GKSTL
Sbjct: 122 TQWLTERAYEEGMRPVDVM-LTSAQNHHAIKELIKRIEKLRKGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI K + +K+++ T + PGTTL ++E L +FDTPG++H +
Sbjct: 180 INAIIKEITG-------DKDVI---TTSRFPGTTLD--KIEIPLDDGTYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ ++ K V+ KE+KP+TY++ A ++ + GL R D + + T +
Sbjct: 228 QMAHYLSAKDLKYVSPKKEIKPKTYQLNASQTLFLGGLGRFDFIDGDKQGF--TAFFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K E A +KH G L PP G K + + K VR EF V + DI +
Sbjct: 286 LKLHRTKLEGADAFYDKHVGSLLMPP-GPKDLTDFPKLVRHEFTVKDKT------DIVFS 338
Query: 503 GLGWFSVRLKGEA----ALGVWTYEGVDIVLRNALL 534
GLGW +R++G+A + W EGV +V+R A++
Sbjct: 339 GLGW--IRVQGKADQPTIVAAWAPEGVGVVVRKAII 372
>gi|251781782|ref|YP_002996084.1| GTP-binding protein YqeH [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390411|dbj|BAH80870.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
Length = 372
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 130/453 (28%), Positives = 213/453 (47%), Gaps = 88/453 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ +Q + + G+ P+ +LKKG E
Sbjct: 6 CIGCGIQIQTEDKEKAGF--TPAA---------------------ALKKG--------ME 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ DV + D R L + ++V+ V
Sbjct: 35 TGEL-------YCQRCFRLRHYNEITDVHIT--------DDEFLRLLHEVGDSDALVVNV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+GS +++ +S GN V+LV K D+LP S+ +
Sbjct: 80 IDIFDFNGSIIPGLSRFIS---------------GN--DVLLVGNKKDILPKSVKDGKVT 122
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ +RA E+G+ + + SA + +K LI+ + +L R +V+ +G N GKSTL+
Sbjct: 123 QWLTERAHEEGLRPLDVM-LTSAQNKYAIKDLIERINELRNGR-DVYVVGVTNVGKSTLI 180
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + + +K+++ T + PGTTL ++E L + +FDTPG++H +Q
Sbjct: 181 NAIIQEITG-------DKDVI---TTSRFPGTTLD--KIEIPLDDGSFIFDTPGIIHRHQ 228
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ +E K+V+ KE+KP+TY++ ++ + GL R D + T + L
Sbjct: 229 MAHYLSPKELKIVSPKKEIKPKTYQLNPEQTLFLGGLSRFDFINGERQGF--TAFFDNQL 286
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A +KH G L PP G+K + K VR EF + +DI +G
Sbjct: 287 ELHRTKLAGADAFYDKHVGTLLTPP-GKKELTAFPKLVRHEFTI------DQKMDIVFSG 339
Query: 504 LGWFSVRLKGE--AALGVWTYEGVDIVLRNALL 534
LGW V ++ + A + W EGV +++R A++
Sbjct: 340 LGWIRVNVQKDSKAIVAAWAPEGVAVIVRKAII 372
>gi|418018489|ref|ZP_12658045.1| putative GTPase YqeH [Streptococcus salivarius M18]
gi|345527338|gb|EGX30649.1| putative GTPase YqeH [Streptococcus salivarius M18]
Length = 372
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/396 (32%), Positives = 199/396 (50%), Gaps = 56/396 (14%)
Query: 145 SEVKKHEKP--VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
S +KK E+ + C RC LRHY ++ DV + D + L + ++V+
Sbjct: 27 SSIKKAEETGELYCQRCFRLRHYNEIVDVHIT--------DDEFLKLLHEVGDSDALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 79 VVDIFDFNGSIIPGLLRFVS---------------GN--DVLLVGNKKDILPKSVKDGKV 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + + SA + +K LI + L R +V+ +G N GKSTL
Sbjct: 122 TQWLTERAHEEGMRPVDVM-LTSAQNHHAIKELIQRIEKLRKGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI K + +K+I+ T + PGTTL ++E L +FDTPG++H +
Sbjct: 180 INAIIKEITG-------DKDII---TTSRFPGTTLD--KIEIPLDDGTYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ ++ K V+ KE+KP+TY++ AG ++ + GL R D + + + T +
Sbjct: 228 QMAHYLSAKDLKYVSPKKEIKPKTYQLNAGQTLFLGGLGRFDFIDGNKQGF--TAFFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K E A +KH G L PP K + + K VR EF V + DI +
Sbjct: 286 LKLHRTKLEGADAFYDKHVGSLLMPP-RPKDLADFPKLVRHEFTVKDKT------DIVFS 338
Query: 503 GLGWFSVRLKGEA----ALGVWTYEGVDIVLRNALL 534
GLGW +R++G+A + W EGV +V+R A++
Sbjct: 339 GLGW--IRVQGKADQPTIVAAWAPEGVGVVVRKAII 372
>gi|422727775|ref|ZP_16784205.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0012]
gi|315151732|gb|EFT95748.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0012]
Length = 369
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 203/452 (44%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q NP GY + + FE E
Sbjct: 7 CIGCGAIIQTENPHELGYTPKTA-------------------------------FEKGME 35
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
T EV C RC LRHY ++DV L D DF +L++ G ++++
Sbjct: 36 TGEV-------YCQRCFRLRHYNDIQDVQ----LTDDDF-----LRLLNGLGTEDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + + D V+LV K+D+LP SL +
Sbjct: 80 VVDIFDFNGSLIPGLHRFIGDNP-----------------VLLVGNKVDILPKSLKKPKM 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R++A E G+ + L S K ++ L+D + R +V+ +G N GKSTL
Sbjct: 123 VQWMREQAHEAGLRPVDVL-LTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I + + + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIQ----------QTVGVQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ K++ KE+KP+ Y++ A ++ + GL R D + + S + S
Sbjct: 229 QMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH KT A EKH G LQPP ++ V E + VR EF V DI A
Sbjct: 287 LNLHRTKTATADAFYEKHVGGLLQPPRADE-VAEFPELVRFEFSV------KEKTDIVFA 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V G A W +GVD++ R AL+
Sbjct: 340 GLGWITVTEPGVVA--GWAPKGVDVLRRKALI 369
>gi|418228253|ref|ZP_12854870.1| hypothetical protein SPAR135_1637 [Streptococcus pneumoniae
3063-00]
gi|353880648|gb|EHE60463.1| hypothetical protein SPAR135_1637 [Streptococcus pneumoniae
3063-00]
Length = 368
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 192/382 (50%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V C RC LRHY ++ DV L D DF KL+ G + S+V+ V+D DF+GS
Sbjct: 38 VYCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDSLVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + VS GN V+LV K D+LP S+ P + W+ +RA E
Sbjct: 89 VIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGKISQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + + SA +K +ID + R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
++N++ T + PGTTL +++ L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DQNVI---TTSRFPGTTLD--KIDIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KE+KP+TY++ ++ + GL R D + T + L LH K E
Sbjct: 238 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFITGEKQGF--TAFFDNELKLHRTKLEG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K EE K V+ F++ + D+ +GLGW +R+
Sbjct: 296 ASDFYDKHVGTLLTPP-NSKEKEEFPKLVQHVFNIKDKT------DLVISGLGW--IRVT 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + VW EGV +V+R A++
Sbjct: 347 GIAKVAVWAPEGVAVVIRKAII 368
>gi|22537804|ref|NP_688655.1| GTP-binding protein YqeH [Streptococcus agalactiae 2603V/R]
gi|76786933|ref|YP_330278.1| GTP-binding protein YqeH [Streptococcus agalactiae A909]
gi|77406588|ref|ZP_00783636.1| GTP-binding protein [Streptococcus agalactiae H36B]
gi|406710043|ref|YP_006764769.1| GTP-binding protein YqeH [Streptococcus agalactiae GD201008-001]
gi|424048892|ref|ZP_17786443.1| GTPase YqeH [Streptococcus agalactiae ZQ0910]
gi|22534697|gb|AAN00528.1|AE014267_11 GTP-binding protein [Streptococcus agalactiae 2603V/R]
gi|76561990|gb|ABA44574.1| GTP-binding protein [Streptococcus agalactiae A909]
gi|77174813|gb|EAO77634.1| GTP-binding protein [Streptococcus agalactiae H36B]
gi|389649661|gb|EIM71137.1| GTPase YqeH [Streptococcus agalactiae ZQ0910]
gi|406650928|gb|AFS46329.1| GTP-binding protein YqeH [Streptococcus agalactiae GD201008-001]
Length = 372
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 204/453 (45%), Gaps = 88/453 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q N GY R + L+KG E
Sbjct: 6 CIGCGARIQTENKDAAGYTPRAA-----------------------LEKG--------LE 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ DV + D + L + ++V+ V
Sbjct: 35 TGEL-------YCQRCFRLRHYNEITDVHIT--------DDEFLKLLHEVGDSDALVVNV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+GS +++ V+ GN V+LV K D+LP S+ +
Sbjct: 80 IDIFDFNGSIIPGLSRFVA---------------GN--DVLLVGNKKDILPKSVKDGKVT 122
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ +RA E+G+ + + SA + +K LID + + +V+ +G N GKSTL+
Sbjct: 123 QWLTERAHEEGLRPVDVI-LTSAQNHHAIKDLIDTIEKYRHGQ-DVYVVGVTNVGKSTLI 180
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + + R +T + PGTTL ++E L + +FDTPG++H +Q
Sbjct: 181 NAIIREITGSR----------DVITTSRFPGTTLD--KIEIPLDDGSYIFDTPGIIHRHQ 228
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ LT + K V+ KE+KP+TY++ + ++ +AGL R D + T + L
Sbjct: 229 MAHYLTAKNLKYVSPKKEIKPKTYQLNSEQTLFLAGLARFDFISGQKQGF--TAYFDNNL 286
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A KH G+ L PP G K V + K VR EF + +DI +G
Sbjct: 287 NLHRTKLVGADEFYTKHVGKLLTPPTG-KEVSDFPKLVRHEFTI------KDKMDIVYSG 339
Query: 504 LGWFSVRLKGE--AALGVWTYEGVDIVLRNALL 534
LGW V+ + E + W EGV +VLR AL+
Sbjct: 340 LGWIRVKSEAENPVVVAAWAPEGVAVVLRKALI 372
>gi|322388318|ref|ZP_08061922.1| GTP-binding protein [Streptococcus infantis ATCC 700779]
gi|419842394|ref|ZP_14365742.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis ATCC
700779]
gi|321140990|gb|EFX36491.1| GTP-binding protein [Streptococcus infantis ATCC 700779]
gi|385703871|gb|EIG40973.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis ATCC
700779]
Length = 368
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 210/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKTGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ ++ + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGL-RLVDVVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ K V+ F + + D+
Sbjct: 285 ELKLHRTKLEGASAFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGSAKVAVWAPEGVAVVTRKAII 368
>gi|430821234|ref|ZP_19439846.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0045]
gi|430438671|gb|ELA49082.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0045]
Length = 369
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 137/452 (30%), Positives = 208/452 (46%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q P GY P L K GL E
Sbjct: 7 CIGCGAVIQTNKPGELGY--TPQTALEK----------------------GLASGE---- 38
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
V C RC LRHY +++DV+ L D DF +L++ G + ++++
Sbjct: 39 ----------VYCQRCFRLRHYNEIQDVS----LTDDDF-----LRLLNELGQKDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + V D V+LV K+D+LP SL T+
Sbjct: 80 VVDIFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKVDILPKSLKKTKL 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+++RA E GI + L +SA K+ + L++ + + R +V+ +G N GKSTL
Sbjct: 123 TQWMKERAYEAGIRPVDVL-LISAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K+ AG + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIKNT-AG---------VQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ +++ KE+KP+ Y++ G ++ + GL R D + S + S
Sbjct: 229 QMAHYLGKKDLRIIAPLKEIKPKVYQLNEGQTLFLGGLARFDFISGNRASF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+ +H K E A +KH G LQPP VEE + VR EF V DI A
Sbjct: 287 VNIHRTKLEKADEFYQKHVGGLLQPP-RPNEVEEFPELVRFEFSV------KEKTDIVFA 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V A + W +GVD++ R AL+
Sbjct: 340 GLGWITV--TAPAVIAGWAPKGVDVLKRKALI 369
>gi|403070192|ref|ZP_10911524.1| GTPase YqeH [Oceanobacillus sp. Ndiop]
Length = 366
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 191/426 (44%), Gaps = 89/426 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q +P GY P+ +L K
Sbjct: 6 CQGCGAPIQTEDPNAIGY--TPASSLEK-------------------------------- 31
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ ++C RC L+HY +++DV++ D DF V S A +V+ V
Sbjct: 32 --------EDILCKRCFRLKHYNEIQDVSI----TDDDFLQMVS----SIREANGLVVHV 75
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D D DGS + + ++ D ++LV K+DLLP S + + E
Sbjct: 76 IDIFDVDGSLIKSLPRITGDNP-----------------IILVGNKLDLLPKSTNRNKLE 118
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R A++ GI K+ + +S+VK G++ L + + + NV+ +G N GKST +
Sbjct: 119 QWLRTEAKDAGI-KVKDVFLISSVKGTGIEELTEQI-EWYRNNKNVYIVGTTNVGKSTFI 176
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + K G GE +T + PGTTLG + + L L DTPG+++ Q
Sbjct: 177 NRLIKQ----STGMGEV------ITTSYFPGTTLGFIEIP--LDENTSLIDTPGIVNKQQ 224
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ ++ E+ K++ KE+K R Y++ + +++ GL R+D + +S + S L
Sbjct: 225 MAHYISDEDLKIITPKKEIKARVYQLNSQQTLYFGGLARIDFIKGDRQSF--VCYFSNEL 282
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + E H G L PP EK +E+L K V F + G DI G
Sbjct: 283 PIHRTKLEKADELYENHAGELLSPP-NEKTLEQLPKLVESTFKIDG-----EKTDIVFPG 336
Query: 504 LGWFSV 509
LGW S+
Sbjct: 337 LGWVSI 342
>gi|400289434|ref|ZP_10791463.1| GTP-binding protein YqeH [Streptococcus ratti FA-1 = DSM 20564]
gi|399922072|gb|EJN94887.1| GTP-binding protein YqeH [Streptococcus ratti FA-1 = DSM 20564]
Length = 368
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 193/381 (50%), Gaps = 50/381 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V C RC LRHY ++ DV + D + L + ++V+ VVD DF+GS
Sbjct: 38 VYCQRCFRLRHYNEITDVHIS--------DDEFLKLLHEVGDSSALVVNVVDIFDFNGSV 89
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + +S GN ++LV K D+LP S+ ++ + W+ +RA E+
Sbjct: 90 IPGLPRFIS---------------GN--DLLLVGNKADILPKSVKASKVKQWLTERAHEE 132
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ + L SA ++ +K LI + L R +V+ +G N GKSTL+NAI + +
Sbjct: 133 GLRPLDVL-LTSAQNHYAIKELIASIEKLRKGR-DVYVVGVTNVGKSTLINAIIREITG- 189
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
+K+++ T + PGTTL ++E L + +FDTPG++H +Q+ L+ +
Sbjct: 190 ------DKDVI---TTSRFPGTTLD--KIEIPLDDGSYIFDTPGIIHRHQMAHYLSAKAL 238
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
K ++ KE+KP+TY++ ++ + GL R D + + + T + L +H K A
Sbjct: 239 KYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFLQGNKQGF--TAYFDNNLKVHRTKLAGA 296
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+KH G L PP E+ + + + VR EF V G + DI +GLGW +RL G
Sbjct: 297 DAFYKKHAGELLTPPDKEE-LADFPQLVRHEFAVDGKT------DIVFSGLGW--IRLAG 347
Query: 514 EAALGVWTYEGVDIVLRNALL 534
+A + W +GV +V R AL+
Sbjct: 348 QAKIAAWAPQGVAVVTRKALI 368
>gi|229544804|ref|ZP_04433529.1| GTP-binding protein [Enterococcus faecalis TX1322]
gi|256854161|ref|ZP_05559526.1| GTP-binding protein YqeH [Enterococcus faecalis T8]
gi|422684471|ref|ZP_16742707.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4000]
gi|229310076|gb|EEN76063.1| GTP-binding protein [Enterococcus faecalis TX1322]
gi|256711104|gb|EEU26147.1| GTP-binding protein YqeH [Enterococcus faecalis T8]
gi|315030785|gb|EFT42717.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4000]
Length = 369
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 203/452 (44%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q NP GY + + FE E
Sbjct: 7 CIGCGAIIQTENPHELGYTPKTA-------------------------------FEKGME 35
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
T EV C RC LR+Y ++DV L D DF +L++ G ++++
Sbjct: 36 TGEV-------YCQRCFRLRYYNDIQDVQ----LTDDDF-----LRLLNGLGTEDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + + D V+LV K+D+LP SL +
Sbjct: 80 VVDIFDFNGSLIPGLHRFIGDNP-----------------VLLVGNKVDILPKSLKKPKM 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R+RA E G+ + L S K ++ L+D + R +V+ +G N GKSTL
Sbjct: 123 VQWMRERAHEAGLRPVDVL-LTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I + + + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIQ----------QTVGVQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ K++ KE+KP+ Y++ A ++ + GL R D + + S + S
Sbjct: 229 QMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH KT A EKH G LQPP ++ V E + VR EF V DI A
Sbjct: 287 LNLHRTKTATADAFYEKHVGGLLQPPRADE-VAEFPELVRFEFSV------KEKTDIVFA 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V G A W +GVD++ R AL+
Sbjct: 340 GLGWITVTEPGVVA--GWAPKGVDVLRRKALI 369
>gi|270293291|ref|ZP_06199500.1| GTP-binding protein [Streptococcus sp. M143]
gi|270278140|gb|EFA23988.1| GTP-binding protein [Streptococcus sp. M143]
Length = 368
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 211/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ D+ L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDIQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P +
Sbjct: 78 NVIDIFDFNGSVIPGLLRFVS---------------GN--DVLLVGNKKDILPKSVKPGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D S E T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ K V+ F++ + D+
Sbjct: 285 ELKLHRTKLEGASAFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFNIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|410494094|ref|YP_006903940.1| GTP-binding protein engA [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|417927491|ref|ZP_12570879.1| ribosome biogenesis GTPase YqeH [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|340765365|gb|EGR87891.1| ribosome biogenesis GTPase YqeH [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|410439254|emb|CCI61882.1| GTP-binding protein engA [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 372
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 214/455 (47%), Gaps = 92/455 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ +Q + + G+ P+ +LKKG E
Sbjct: 6 CIGCGIQIQTEDKEKAGF--TPAA---------------------ALKKG--------ME 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ DV + D R L + ++V+ V
Sbjct: 35 TGEL-------YCQRCFRLRHYNEITDVHIT--------DDEFLRLLHEVGDSDALVVNV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+GS +++ +S GN V+LV K D+LP S+ +
Sbjct: 80 IDIFDFNGSIIPGLSRFIS---------------GN--DVLLVGNKKDILPKSVKDGKVT 122
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ +RA E+G+ + + SA + +K LI+ + +L R +V+ +G N GKSTL+
Sbjct: 123 QWLTERAHEEGLRPLDVM-LTSAQNKYAIKDLIERINELRNGR-DVYVVGVTNVGKSTLI 180
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + + +K+++ T + PGTTL ++E L + +FDTPG++H +Q
Sbjct: 181 NAIIQEITG-------DKDVI---TTSRFPGTTL--YKIEIPLDDGSFIFDTPGIIHRHQ 228
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ +E K+V+ KE+KP+TY++ ++ + GL R D + T + L
Sbjct: 229 MAHYLSPKELKIVSPKKEIKPKTYQLNPEQTLFLGGLSRFDFINGERQGF--TAFFDNQL 286
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A +KH G L PP G+K + K VR EF + +DI +G
Sbjct: 287 ELHRTKLAGADAFYDKHVGTLLTPP-GKKELTAFPKLVRHEFTI------DQKMDIVFSG 339
Query: 504 LGWFSVRLKGE----AALGVWTYEGVDIVLRNALL 534
LGW +R+ G+ A + W EGV +++R A++
Sbjct: 340 LGW--IRVNGQKDSKAIVAAWAPEGVAVIVRKAII 372
>gi|322388976|ref|ZP_08062546.1| GTP-binding protein [Streptococcus parasanguinis ATCC 903]
gi|321144281|gb|EFX39689.1| GTP-binding protein [Streptococcus parasanguinis ATCC 903]
Length = 368
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 210/456 (46%), Gaps = 98/456 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q N + GY P L K GL E
Sbjct: 6 CIGCGAPIQTENKEGLGY--TPQSALEK----------------------GL-------E 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
T EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 35 TGEV-------YCQRCFRLRHYNEITDVH----LTDDDF-----LKLLHEVGDSDALVVN 78
Query: 203 VVDAADFDGS----FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLS 258
VVD DF+GS PR VA GN V+LV K D+LP S+
Sbjct: 79 VVDIFDFNGSVIPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVK 117
Query: 259 PTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAG 318
++ HW+ +RA E+G+ + + SA +K L++ + R +V+ +G N G
Sbjct: 118 DSKVTHWLMERAHEEGMRPVDVV-LTSAQNKSAIKDLMEKIEQHRKGR-DVYVVGVTNVG 175
Query: 319 KSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGL 378
KSTL+NAI + + +K+I+ T + PGTTL ++E L + ++DTPG+
Sbjct: 176 KSTLINAIIQEITG-------DKDII---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGI 223
Query: 379 LHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVW 438
+H +Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + + T +
Sbjct: 224 IHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIKGEKQGF--TAF 281
Query: 439 ASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVD 498
L LH K E A +KH G L PP K EE V EF + + D
Sbjct: 282 FDNELKLHRTKLEGATAFYDKHVGSLLTPP-NSKEKEEFPPLVSHEFTIKDKT------D 334
Query: 499 IAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+ +GLGW +R+ GEA + VW EGV +V R A++
Sbjct: 335 LVISGLGW--IRVNGEAKVAVWAPEGVAVVTRKAII 368
>gi|422758292|ref|ZP_16812054.1| GTP-binding protein YqeH [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322411127|gb|EFY02035.1| GTP-binding protein YqeH [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 372
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 194/385 (50%), Gaps = 54/385 (14%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
+ C RC LRHY ++ DV + D R L + ++V+ V+D DF+GS
Sbjct: 38 LYCQRCFRLRHYNEITDVHIT--------DDEFLRLLHEVGNSDALVVNVIDIFDFNGSI 89
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+++ +S GN V+LV K D+LP S+ + W+ +RA E+
Sbjct: 90 IPGLSRFIS---------------GN--DVLLVGNKKDILPKSVKNGKVTQWLTERAHEE 132
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ + + SA + +K LI+ + +L R +V+ +G N GKSTL+NAI + +
Sbjct: 133 GLRPL-DVMLTSAQNKYAIKDLIERINELRNGR-DVYVVGVTNVGKSTLINAIIQEITG- 189
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
+K+++ T + PGTTL ++E L + +FDTPG++H +Q+ L+ +E
Sbjct: 190 ------DKDVI---TTSRFPGTTLD--KIEIPLDDGSFIFDTPGIIHRHQMAHYLSPKEL 238
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
K+V+ KE+KP+TY++ ++ + GL R D + T + L LH K A
Sbjct: 239 KIVSPKKEIKPKTYQLNPEQTLFLGGLARFDFINGERQGF--TAFFDNQLELHRTKLAGA 296
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+KH G L PP G+K + L K VR EF + +DI +GLGW +R+ G
Sbjct: 297 DAFYDKHVGTLLTPP-GKKELTALPKLVRHEFTI------DQKMDIVFSGLGW--IRVNG 347
Query: 514 E----AALGVWTYEGVDIVLRNALL 534
+ A + W EGV +++R A++
Sbjct: 348 QKDSKAIVAAWAPEGVAVIVRKAII 372
>gi|320547439|ref|ZP_08041726.1| GTP-binding protein [Streptococcus equinus ATCC 9812]
gi|320447916|gb|EFW88672.1| GTP-binding protein [Streptococcus equinus ATCC 9812]
Length = 372
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 137/456 (30%), Positives = 208/456 (45%), Gaps = 92/456 (20%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q + + GY P L K GL
Sbjct: 5 LCIGCGAKIQTEDKEQAGY--TPKAALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
ET E+ C RC LRHY ++ DV + D + L + ++V+
Sbjct: 34 ETGEL-------YCQRCFRLRHYNEITDVHIT--------DDEFLKLLHEVGDSDALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS +++ VS GN V+LV K D+LP S+ +
Sbjct: 79 VVDIFDFNGSVIPGLSRFVS---------------GN--DVLLVGNKKDILPKSVKTGKV 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + + SA + +K LI+ + L R +V+ +G N GKSTL
Sbjct: 122 TQWLTERAHEEGLRPVDVI-LTSAQNHQAIKDLIEKIEKLRKGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI K + EK+I+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIKEITG-------EKDII---TTSRFPGTTLD--KIEIPLDDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L + K ++ KE+KP+TY++ ++ +AGL R D + T +
Sbjct: 228 QMAHYLGDKNLKYISPKKEIKPKTYQLNPEQTLFLAGLGRFDFISGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A +KH G L PP +K + E K VR EF + +D+ +
Sbjct: 286 LKLHRTKLAGADAFYDKHVGSLLTPP-SDKELAEFPKLVRHEFTI------KDKMDVVYS 338
Query: 503 GLGWFSVRLKGEAA----LGVWTYEGVDIVLRNALL 534
GLGW +R+K A + W EGV +VLR AL+
Sbjct: 339 GLGW--IRIKASQAKPVKIAAWAPEGVSVVLRKALI 372
>gi|163790555|ref|ZP_02184984.1| hypothetical protein CAT7_08240 [Carnobacterium sp. AT7]
gi|159874158|gb|EDP68233.1| hypothetical protein CAT7_08240 [Carnobacterium sp. AT7]
Length = 377
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 138/452 (30%), Positives = 214/452 (47%), Gaps = 89/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q T+ G+ P+ ++L+KG
Sbjct: 14 CIGCGAIIQTTDKNAVGF--TPT---------------------SALEKG---------- 40
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
+ + + C RC LRHY +++DV L D DF KL++ G+ ++++
Sbjct: 41 -----QEKGEIYCQRCFRLRHYNEIQDVQ----LTDDDF-----LKLLNELGSEDALIVN 86
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + V G P V+LV K+DLLP SL +
Sbjct: 87 VIDIFDFNGSLIPGLHRFV----------------GKNP-VLLVGNKVDLLPKSLKRGKM 129
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R+RA E+G+ + + SA+K ++ L+D ++ K NV+ +G N GKSTL
Sbjct: 130 TQWLRERAHEEGL-RPEDVLLTSAMKPAEMEVLLD-TIEKHRKGRNVFVVGVTNVGKSTL 187
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I KS AG + +T + PGTTL R+E L L DTPG++H +
Sbjct: 188 INQIIKST-AG---------VQDLITTSQFPGTTLD--RIEIPLDDGKFLIDTPGIIHRH 235
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L ++ KL+ KE+KP Y++ G ++ G+ R D + S T + S
Sbjct: 236 QMAHVLGDKDLKLIAPKKEIKPIVYQLNEGQTLFFGGVARFDYLKGGRHSF--TCFTSND 293
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K E A + +K G+ LQPP E +E + VR EF V S DI A
Sbjct: 294 LLIHRTKLEKADELYQKQVGKLLQPP-RENEIENFPELVRFEFSVKEKS------DIVFA 346
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V G G W +G+D+++R +L+
Sbjct: 347 GLGWVTVNEPGCVVAG-WAPKGIDVLIRKSLI 377
>gi|417915755|ref|ZP_12559360.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis bv. 2 str.
SK95]
gi|342832772|gb|EGU67062.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis bv. 2 str.
SK95]
Length = 368
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 191/382 (50%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V C RC LRHY ++ DV L D DF KL+ G + ++V+ V+D DF+GS
Sbjct: 38 VYCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + VS GN V+LV K D+LP S+ P + W+ +RA E
Sbjct: 89 VIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGKISQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + + SA +K +ID + R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
++N++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KE+KP+TY++ ++ + GL R D + T + L LH K E
Sbjct: 238 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFITGEKQGF--TAFFDNELKLHRTKLEG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K E+ K V+ F++ + D+ +GLGW +R+
Sbjct: 296 ASAFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFNIKDKT------DLVISGLGW--IRVT 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + VW EGV +V R A++
Sbjct: 347 GTAKVAVWAPEGVAVVTRKAII 368
>gi|449947225|ref|ZP_21807268.1| GTP-binding protein YqeH [Streptococcus mutans 11SSST2]
gi|449168888|gb|EMB71686.1| GTP-binding protein YqeH [Streptococcus mutans 11SSST2]
Length = 368
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 188/382 (49%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
+ C RC LRHY ++ DV + D DF KL+ G +R++V+ V+D DF+GS
Sbjct: 38 IYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + +S + ++LV K D+LP S+ + W+ + A E
Sbjct: 89 VIPGLQRFISSS-----------------DLLLVGNKADILPKSVKSGKITQWLMECAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + L SA W +K LI + +L R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPL-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
+KNI+ T + PGTTL ++E L + +FDTPG++H +Q+ L+ +
Sbjct: 190 -------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRHQMAHYLSDKA 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 238 LKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKLAG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP +K + K VR EF + D+ +GLGW +R+
Sbjct: 296 ADAFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFSGLGW--IRIN 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + W EGV +V R +L+
Sbjct: 347 GRAKIAAWAPEGVAVVTRKSLI 368
>gi|417936728|ref|ZP_12580035.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis X]
gi|343400244|gb|EGV12764.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis X]
Length = 368
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 191/382 (50%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V C RC LRHY ++ DV L D DF KL+ G + ++V+ V+D DF+GS
Sbjct: 38 VYCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + VS GN V+LV K D+LP S+ P + W+ +RA E
Sbjct: 89 VIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGKISQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + + SA +K +ID + R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
++N++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KE+KP+TY++ ++ + GL R D + T + L LH K E
Sbjct: 238 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRTKLEG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K E+ K V+ F++ + D+ +GLGW +R+
Sbjct: 296 ASAFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFNIKDKT------DLVISGLGW--IRVT 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + VW EGV +V R A++
Sbjct: 347 GTAKVAVWAPEGVAVVTRKAII 368
>gi|339634961|ref|YP_004726602.1| GTPase YqeH [Weissella koreensis KACC 15510]
gi|338854757|gb|AEJ23923.1| GTPase YqeH [Weissella koreensis KACC 15510]
Length = 380
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 188/382 (49%), Gaps = 51/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC LRHY +++ V L D DF R L S S+V+ V+D DF GS
Sbjct: 49 VLCQRCFRLRHYNEIQPVD----LTDDDFR----RLLDQISTTDSLVVYVMDVFDFSGSL 100
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V G+ P V+LV K+D+LP +L + + W+RQ+A
Sbjct: 101 IPGLHRFV----------------GSNP-VLLVGNKVDILPHALRRAKIKEWMRQQANRA 143
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ I + S + +L+D + R +V+ +G N GKSTL+N I K V
Sbjct: 144 GLRPI-DIALTSGKNGDDVPALLDMIEKYRAGR-SVYVVGVTNVGKSTLINQIIKDVTG- 200
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
EKN V +T + PGTTL R+E L Q+ + DTPG++HP+Q+ LT ++
Sbjct: 201 ------EKNDV--ITTSRFPGTTLD--RIEISLDDQSNIIDTPGIIHPDQMAHYLTPQDL 250
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
K V+ KELKPRTY++ A ++ + + R D + I T + LP+H K +NA
Sbjct: 251 KYVSPQKELKPRTYQLNAEQTLFMGAMARFDFIQGPKSGI--TAYFENNLPIHRTKLDNA 308
Query: 454 CTMVEKHFGRQLQPPIGEK-RVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
KH G L PP EK +E+L R EF + DI GLGW +V
Sbjct: 309 DQFYAKHAGVLLTPP--EKVNLEDLPPLKRHEFKT------TEKTDIVIDGLGWVTV--P 358
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G+ + W +GV ++ R A++
Sbjct: 359 GQVVVAAWAPKGVSVLTRKAMI 380
>gi|417937776|ref|ZP_12581076.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis SK970]
gi|343392040|gb|EGV04613.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis SK970]
Length = 368
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 139/453 (30%), Positives = 210/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P +
Sbjct: 78 NVIDIFDFNGSVIPGLTRFVS---------------GN--DVLLVGNKKDILPKSVKPGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D S E T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ K V+ F + + D+
Sbjct: 285 ELKLHRTKLEGASAFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|19745428|ref|NP_606564.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS8232]
gi|71902919|ref|YP_279722.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS6180]
gi|139474400|ref|YP_001129116.1| GTP-binding protein YqeH [Streptococcus pyogenes str. Manfredo]
gi|306827997|ref|ZP_07461264.1| ribosome biogenesis GTPase YqeH [Streptococcus pyogenes ATCC 10782]
gi|386316307|ref|YP_006012471.1| GTP-binding protein YqeH [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|417752128|ref|ZP_12400359.1| ribosome biogenesis GTPase YqeH [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|19747540|gb|AAL97063.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
gi|71802014|gb|AAX71367.1| GTP-binding protein [Streptococcus pyogenes MGAS6180]
gi|134272647|emb|CAM30914.1| GTP-binding protein [Streptococcus pyogenes str. Manfredo]
gi|304429916|gb|EFM32958.1| ribosome biogenesis GTPase YqeH [Streptococcus pyogenes ATCC 10782]
gi|323126594|gb|ADX23891.1| GTP-binding protein YqeH [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|333772086|gb|EGL48968.1| ribosome biogenesis GTPase YqeH [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
Length = 372
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 214/455 (47%), Gaps = 92/455 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ +Q + + G+ P+ +LKKG E
Sbjct: 6 CIGCGIQIQTEDKEKAGF--TPAA---------------------ALKKG--------ME 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ DV + D R L + ++V+ V
Sbjct: 35 TGEL-------YCQRCFRLRHYNEITDVHIT--------DDEFLRLLHEVGDSDALVVNV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+GS +++ +S GN V+LV K D+LP S+ +
Sbjct: 80 IDIFDFNGSIIPGLSRFIS---------------GN--DVLLVGNKKDILPKSVKDGKVT 122
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ +RA E+G+ + + SA + +K LI+ + +L R +V+ +G N GKSTL+
Sbjct: 123 QWLTERAHEEGLRPLDVM-LTSAQNKYAIKDLIERINELRNGR-DVYVVGVTNVGKSTLI 180
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + + +K+++ T + PGTTL ++E L + +FDTPG++H +Q
Sbjct: 181 NAIIQEITG-------DKDVI---TTSRFPGTTLD--KIEIPLDDGSFIFDTPGIIHRHQ 228
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ +E K+V+ KE+KP+TY++ ++ + GL R D + T + L
Sbjct: 229 MAHYLSPKELKIVSPKKEIKPKTYQLNPEQTLFLGGLSRFDFINGERQGF--TAFFDNQL 286
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A +KH G L PP G+K + K VR EF + +DI +G
Sbjct: 287 ELHRTKLAGADAFYDKHVGTLLTPP-GKKELTAFPKLVRHEFTI------DQKMDIVFSG 339
Query: 504 LGWFSVRLKGE----AALGVWTYEGVDIVLRNALL 534
LGW +R+ G+ A + W EGV +++R A++
Sbjct: 340 LGW--IRVNGQKDSKAIVAAWAPEGVAVIVRKAII 372
>gi|417940627|ref|ZP_12583915.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK313]
gi|343389508|gb|EGV02093.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK313]
Length = 336
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/382 (32%), Positives = 191/382 (50%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V C RC LRHY ++ DV L D DF KL+ G + ++V+ V+D DF+GS
Sbjct: 6 VYCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVVNVIDIFDFNGS 56
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + VS GN V+LV K D+LP S+ P + W+ +RA E
Sbjct: 57 VIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGKISQWLMERAHE 99
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + + SA +K +ID + R +V+ +G N GKSTL+NAI + +
Sbjct: 100 EGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITG 157
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
++N++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 158 -------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 205
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KE+KP+TY++ ++ + GL R D S E T + L LH K E
Sbjct: 206 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELKLHRTKLEG 263
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K EE K V+ F + + D+ +GLGW +R+
Sbjct: 264 ASAFYDKHLGTLLTPP-NSKEKEEFPKLVQHVFTIKDKT------DLVISGLGW--IRVT 314
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + VW EGV +V R A++
Sbjct: 315 GIAKVAVWAPEGVAVVTRKAII 336
>gi|422859067|ref|ZP_16905717.1| GTP-binding protein [Streptococcus sanguinis SK1057]
gi|327458847|gb|EGF05195.1| GTP-binding protein [Streptococcus sanguinis SK1057]
Length = 368
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 191/385 (49%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVQ----LTDDDF----LRLLHEVGDSDALVVNVVDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ ++ W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKDSKMTQWLTER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LID + R +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ +K+I+ T + PGTTL ++E L + ++DTPG++H +Q+ L+
Sbjct: 187 ITG-------DKDII---TTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLS 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
E A +KH G L PP+G+++ EE V+ EF + + DI +GLGW +
Sbjct: 293 LEGASDFYDKHVGGLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W EGV IV R A++
Sbjct: 344 RVSGPARVAGWAPEGVAIVTRKAII 368
>gi|418968094|ref|ZP_13519722.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK616]
gi|383341384|gb|EID19644.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK616]
Length = 368
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 209/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ K V+ F++ D+
Sbjct: 285 ELKLHRTKLEGASAFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFNI------KEKTDLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|449988609|ref|ZP_21820627.1| GTP-binding protein YqeH [Streptococcus mutans NVAB]
gi|449183787|gb|EMB85761.1| GTP-binding protein YqeH [Streptococcus mutans NVAB]
Length = 368
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 202/452 (44%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T + GY P L K L+ G
Sbjct: 6 CIGCGAQIQTTAKEQAGY--TPKSALEK-----------------GLESG---------- 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC LRHY ++ DV + D DF KL+ G +R++V+
Sbjct: 37 ---------KIYCQRCFRLRHYNEITDVHIS----DDDF-----LKLLHEVGDSRALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + +S ++LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSVIPGLQRFISSN-----------------DLLLVGNKADILPKSVKSGKI 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ L SA W +K LI + +L R +V+ +G N GKSTL
Sbjct: 122 TQWLMERAHEEGLRPF-DLILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +KNI+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKNII---TTSRFPGTTLD--KIEIPLNDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ + K ++ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 228 QMAHYLSDKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A +KH G L PP +K + K VR EF + D+ +
Sbjct: 286 LKLHRTKLAGADAFYDKHIGSLLTPP-DKKEMAAFPKLVRHEFTI------KEKTDLVFS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ A + W EGV +V R AL+
Sbjct: 339 GLGW--IRINVRAKIAAWAPEGVAVVTRKALI 368
>gi|307708267|ref|ZP_07644734.1| GTP-binding protein [Streptococcus mitis NCTC 12261]
gi|307615713|gb|EFN94919.1| GTP-binding protein [Streptococcus mitis NCTC 12261]
Length = 368
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 191/382 (50%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V C RC LRHY ++ DV L D DF KL+ G + ++V+ V+D DF+GS
Sbjct: 38 VYCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + VS GN V+LV K D+LP S+ P + W+ +RA E
Sbjct: 89 VIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGKISQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + + SA +K +ID + R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
++N++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KE+KP+TY++ ++ + GL R D S E T + L LH K E
Sbjct: 238 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELKLHRTKLEG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K E+ K V+ F++ D+ +GLGW +R+
Sbjct: 296 ASAFYDKHVGTLLTPP-NSKEKEDFPKLVQHVFNI------KEKTDLVISGLGW--IRVT 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + VW EGV +V R A++
Sbjct: 347 GTAKVAVWAPEGVAVVTRKAII 368
>gi|401684247|ref|ZP_10816130.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. BS35b]
gi|400186552|gb|EJO20764.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. BS35b]
Length = 368
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 192/382 (50%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V C RC LRHY ++ DV L D DF KL+ G + ++V+ V+D DF+GS
Sbjct: 38 VYCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + VS GN V+LV K D+LP S+ P + W+ +RA E
Sbjct: 89 VIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGKISQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + + SA +K +ID + R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKDR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
++N++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KE+KP+TY++ ++ + GL R D S E T + L LH K E+
Sbjct: 238 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELKLHRTKLES 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K E+ K V+ F + + D+ +GLGW +R+
Sbjct: 296 ASAFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFTIKDKT------DLVISGLGW--IRVT 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + VW EGV ++ R A++
Sbjct: 347 GTAKVAVWAPEGVAVITRKAII 368
>gi|392531382|ref|ZP_10278519.1| GTPase YqeH [Carnobacterium maltaromaticum ATCC 35586]
Length = 377
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 142/455 (31%), Positives = 207/455 (45%), Gaps = 95/455 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q P GY P L K L+ G
Sbjct: 14 CIGCGAVIQTNAPGELGY--TPVSALEK-----------------GLENG---------- 44
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
V C RC LRHY +++DV L D DF +L++ GA ++++
Sbjct: 45 ---------EVYCQRCFRLRHYNEIQDVQ----LTDDDF-----LRLLNEIGAEDALIVN 86
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + V GN P V+LV K+DLLP SL +
Sbjct: 87 VIDIFDFNGSLIPGLHRFV----------------GNNP-VLLVGNKVDLLPHSLKRGKM 129
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R+RA E+G+ + + SA+K + L+ + R +V+ +G N GKSTL
Sbjct: 130 TQWLRERAHEEGL-RPKDVILTSAMKPKEMDDLLKTIEKYREGR-DVFVVGVTNVGKSTL 187
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K+ AG + +T + PGTTL R+E L L DTPG++H +
Sbjct: 188 INQIIKNT-AG---------VADVITTSQFPGTTLD--RIEIPLDDGKSLIDTPGIIHRH 235
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L ++ KL+ KE+KP Y++ G ++ G+ R D + S T + S
Sbjct: 236 QMAHVLGDKDLKLIAPKKEIKPMVYQLNEGQTLFFGGVARFDYIQGGRRSF--TCYTSND 293
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKW---VRKEFHVSGSSWDSSSVDI 499
L +H K E A + H G LQPP R +E+G + VR EF V S DI
Sbjct: 294 LKIHRTKLEKADELYANHVGEMLQPP----RKDEVGNFPELVRFEFSVKERS------DI 343
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
AGLGW +V G G W +GVD+V+R +L+
Sbjct: 344 VFAGLGWVTVNEPGAVVAG-WAPKGVDVVIRKSLI 377
>gi|421276677|ref|ZP_15727498.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SPAR10]
gi|395876883|gb|EJG87955.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SPAR10]
Length = 368
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 190/382 (49%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V C RC LRHY ++ DV L D DF KL+ G + ++V+ V+D DF+GS
Sbjct: 38 VYCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + VS GN V+LV K D+LP S+ P + W+ +RA E
Sbjct: 89 VIPGLPRFVS---------------GN--DVILVGNKKDILPKSVKPGKISQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + + SA +K +ID + R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
++N++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KE+KP+TY++ ++ + GL R D + T + L LH K E
Sbjct: 238 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRTKLEG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K E+ K V+ F + + D+ +GLGW +R+
Sbjct: 296 ASDFYDKHLGTLLTPP-NNKEKEDFPKLVQHVFTIKDKT------DLVISGLGW--IRVT 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + VW EGV +V R A++
Sbjct: 347 GTAKVAVWAPEGVAVVTRKAII 368
>gi|417006045|ref|ZP_11944615.1| GTP-binding protein YqeH [Streptococcus agalactiae FSL S3-026]
gi|341576226|gb|EGS26637.1| GTP-binding protein YqeH [Streptococcus agalactiae FSL S3-026]
Length = 372
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 203/453 (44%), Gaps = 88/453 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q N GY R + L+KG E
Sbjct: 6 CIGCGARIQTENKDAAGYTPRAA-----------------------LEKG--------LE 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ DV + D + L + ++V+ V
Sbjct: 35 TGEL-------YCQRCFRLRHYNEITDVHIT--------DDEFLKLLHEVGDSDALVVNV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+GS +++ VS GN V+LV K D+LP S+ +
Sbjct: 80 IDIFDFNGSIIPGLSRFVS---------------GN--DVLLVGNKKDILPKSVKDGKVT 122
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ +RA E+G+ + + SA + +K LID + R +V+ +G N GKSTL+
Sbjct: 123 QWLTERAHEEGLRPVDVI-LTSAQNHHAIKDLIDTIEKYRHGR-DVYVVGVTNVGKSTLI 180
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + + R +T + PGTTL ++E L + +FDTPG++H +Q
Sbjct: 181 NAIIREITGSR----------DVITTSRFPGTTLD--KIEIPLDDGSYIFDTPGIIHRHQ 228
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ LT + K V+ KE+KP+TY++ + ++ +AGL R D + T + L
Sbjct: 229 MAHYLTAKNLKYVSPKKEIKPKTYQLNSEQTLFLAGLARFDFISGQKQGF--TAYFDNNL 286
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A KH G+ L PP K V + K VR EF + +DI +G
Sbjct: 287 NLHRTKLVGADEFYTKHVGKLLIPPT-SKEVSDFPKLVRHEFTI------KDKMDIVYSG 339
Query: 504 LGWFSVRLKGE--AALGVWTYEGVDIVLRNALL 534
LGW V+ + E + W EGV +VLR AL+
Sbjct: 340 LGWIRVKSETENPVVVAAWAPEGVAVVLRKALI 372
>gi|419778100|ref|ZP_14304002.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK10]
gi|383187853|gb|EIC80297.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK10]
Length = 368
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 211/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P++
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPSK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+N+I + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINSIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D S E T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ K V+ F + + D+
Sbjct: 285 ELKLHRTKLEGASAFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|312867215|ref|ZP_07727425.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis F0405]
gi|419799139|ref|ZP_14324507.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis F0449]
gi|311097344|gb|EFQ55578.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis F0405]
gi|385698679|gb|EIG29026.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis F0449]
Length = 368
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 209/456 (45%), Gaps = 98/456 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q N + GY P L K GL E
Sbjct: 6 CIGCGAPIQTENKEGLGY--TPQSALEK----------------------GL-------E 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
T EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 35 TGEV-------YCQRCFRLRHYNEITDVH----LTDDDF-----LKLLHEVGDSDALVVN 78
Query: 203 VVDAADFDGS----FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLS 258
VVD DF+GS PR VA GN V+LV K D+LP S+
Sbjct: 79 VVDIFDFNGSVIPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVK 117
Query: 259 PTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAG 318
++ HW+ +RA E+G+ + + SA +K L++ + R +V+ +G N G
Sbjct: 118 DSKVTHWLMERAHEEGMRPVDVV-LTSAQNKSAIKDLMEKIEQYRKGR-DVYVVGVTNVG 175
Query: 319 KSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGL 378
KSTL+NAI + + +K+I+ T + PGTTL ++E L + ++DTPG+
Sbjct: 176 KSTLINAIIQEITG-------DKDII---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGI 223
Query: 379 LHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVW 438
+H +Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + + T +
Sbjct: 224 IHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIKGEKQGF--TAF 281
Query: 439 ASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVD 498
L LH K E A KH G L PP K EE V EF + + D
Sbjct: 282 FDNELKLHRTKLEGATAFYNKHVGGLLTPP-NSKEKEEFPPLVSHEFTIKDKT------D 334
Query: 499 IAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+ +GLGW +R+ GEA + VW EGV +V R A++
Sbjct: 335 LVISGLGW--IRVNGEAKVAVWAPEGVAVVTRKAII 368
>gi|390453028|ref|ZP_10238556.1| hypothetical protein PpeoK3_03290 [Paenibacillus peoriae KCTC 3763]
Length = 375
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 207/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ MQ T+P+ PGY P + L +
Sbjct: 13 CSGCGITMQTTSPELPGYI--PEKLLTR-------------------------------- 38
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
+PV+C RC +++Y + V V D KL+S G + ++V+
Sbjct: 39 --------EPVICQRCFRIKNYNETSSVAV---------DQDEFLKLLSQIGDKDALVIH 81
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
+VD DF+GS + + V G+ P V+L V K DLLP + +
Sbjct: 82 IVDIFDFEGSLISGLQRFV----------------GSNP-VILAVNKTDLLPKVTNWNKV 124
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+WV+++A+E G+ + + SA KN G L+D V +L G R +V+ +GA N GKSTL
Sbjct: 125 RNWVQKQAKEQGL-RTADIVLCSAKKNQGFDRLLDVVSELRGNR-DVYVVGATNVGKSTL 182
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N + + + ++ LT + PGTTL +V + L + DTPG+++P
Sbjct: 183 INRLIR----------DYSDMEQELTTSRYPGTTLDMVNIP--LDDGKHIIDTPGIVYPW 230
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
+ + ++R++ + +K LKP Y++ G ++ G+ R D E +S T + +
Sbjct: 231 RFSEIVSRQDLSAIMPDKPLKPAAYQLDFGQTLFFGGMGRFDFIEGQHQSF--TCYINGG 288
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K E A + H G L PP ++ + E+ +W R EF V + DI +
Sbjct: 289 LKIHRTKLERADQLFADHAGELLSPPTRDQ-LAEMPEWTRHEFRVP----RKTPSDIYIS 343
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW V A + V G+ ++LR AL+
Sbjct: 344 GLGWIRVNSDSGALVAVHVPRGIRVLLRPALI 375
>gi|315612639|ref|ZP_07887551.1| ribosome biogenesis GTPase YqeH [Streptococcus sanguinis ATCC
49296]
gi|315315226|gb|EFU63266.1| ribosome biogenesis GTPase YqeH [Streptococcus sanguinis ATCC
49296]
Length = 368
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 210/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E+A +KH G L PP K E+ K V+ F + + D+
Sbjct: 285 ELKLHRTKLESASAFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGSAKVAVWAPEGVAVVTRKAII 368
>gi|420160958|ref|ZP_14667729.1| GTP-binding protein [Weissella koreensis KCTC 3621]
gi|394745708|gb|EJF34526.1| GTP-binding protein [Weissella koreensis KCTC 3621]
Length = 380
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 188/382 (49%), Gaps = 51/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC LRHY +++ V L D DF R L S S+V+ V+D DF GS
Sbjct: 49 VLCQRCFRLRHYNEIQPVD----LTDDDFR----RLLDQISTTDSLVVYVMDVFDFSGSL 100
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V G+ P V+LV K+D+LP +L + + W+RQ+A
Sbjct: 101 IPGLHRFV----------------GSNP-VLLVGNKVDILPHALRRAKIKEWMRQQANRA 143
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ I + S + +L+D + R +V+ +G N GKSTL+N I K V
Sbjct: 144 GLRPI-DIALTSGKNGDDVPALLDMIEKYRAGR-SVYVVGVTNVGKSTLINQIIKDVTG- 200
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
EKN V +T + PGTTL R+E L Q+ + DTPG++HP+Q+ LT ++
Sbjct: 201 ------EKNDV--ITTSRFPGTTLD--RIEISLDDQSNIIDTPGIIHPDQMAHYLTPQDL 250
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
K V+ KELKPRTY++ A ++ + + R D + I T + LP+H K +NA
Sbjct: 251 KYVSPQKELKPRTYQLNAEQTLFMGAMARFDFIQGPKSGI--TAYFENNLPIHRTKLDNA 308
Query: 454 CTMVEKHFGRQLQPPIGEK-RVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
KH G L PP EK +E+L R EF + DI GLGW +V
Sbjct: 309 DQFYVKHAGVLLTPP--EKVNLEDLPPLKRHEFKT------TEKTDIVIDGLGWVTV--P 358
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G+ + W +GV ++ R A++
Sbjct: 359 GQVVVAAWAPKGVSVLTRKAMI 380
>gi|306825774|ref|ZP_07459113.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|414157993|ref|ZP_11414287.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. F0441]
gi|304432135|gb|EFM35112.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|410870538|gb|EKS18495.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. F0441]
Length = 368
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 139/453 (30%), Positives = 210/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D S E T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ K V+ F + + D+
Sbjct: 285 ELKLHRTKLEGASAFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|414083274|ref|YP_006991982.1| ribosome biogenesis GTPase YqeH [Carnobacterium maltaromaticum
LMA28]
gi|412996858|emb|CCO10667.1| ribosome biogenesis GTPase YqeH [Carnobacterium maltaromaticum
LMA28]
Length = 377
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 140/452 (30%), Positives = 205/452 (45%), Gaps = 89/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q P GY P L K L+ G
Sbjct: 14 CIGCGAVIQTNAPGELGY--TPVSALEK-----------------GLENG---------- 44
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
V C RC LRHY +++DV L D DF +L++ GA ++++
Sbjct: 45 ---------EVYCQRCFRLRHYNEIQDVQ----LTDDDF-----LRLLNEIGAEDALIVN 86
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + V GN P V+LV K+DLLP SL +
Sbjct: 87 VIDIFDFNGSLIPGLHRFV----------------GNNP-VLLVGNKVDLLPHSLKRGKM 129
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R+RA E+G+ + + SA+K + L+ + R +V+ +G N GKSTL
Sbjct: 130 TQWLRERAHEEGL-RPKDVILTSAMKPKEMDDLLKTIEKYREGR-DVFVVGVTNVGKSTL 187
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K+ AG + +T + PGTTL R+E L L DTPG++H +
Sbjct: 188 INQIIKNT-AG---------VADVITTSQFPGTTLD--RIEIPLDDGKSLIDTPGIIHRH 235
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L ++ KL+ KE+KP Y++ G ++ G+ R D + S T + S
Sbjct: 236 QMAHVLGDKDLKLIAPKKEIKPMVYQLNEGQTLFFGGVARFDYIQGGRRSF--TCYTSND 293
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K E A + H G LQPP + V+ + VR EF V S DI A
Sbjct: 294 LKIHRTKLEKADELYANHVGEMLQPP-RKDEVDNFPELVRFEFSVKERS------DIVFA 346
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V G G W +GVD+V+R +L+
Sbjct: 347 GLGWVTVNEPGAVVAG-WAPKGVDVVIRKSLI 377
>gi|406587446|ref|ZP_11062332.1| GTPase YqeH [Streptococcus sp. GMD1S]
gi|419814222|ref|ZP_14339020.1| GTPase YqeH [Streptococcus sp. GMD2S]
gi|419816835|ref|ZP_14341007.1| GTPase YqeH [Streptococcus sp. GMD4S]
gi|404466599|gb|EKA11917.1| GTPase YqeH [Streptococcus sp. GMD4S]
gi|404472084|gb|EKA16530.1| GTPase YqeH [Streptococcus sp. GMD2S]
gi|404473066|gb|EKA17431.1| GTPase YqeH [Streptococcus sp. GMD1S]
Length = 368
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 192/382 (50%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V C RC LRHY ++ DV L D DF KL+ G + ++V+ V+D DF+GS
Sbjct: 38 VYCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + VS GN V+LV K D+LP S+ P++ W+ +RA E
Sbjct: 89 VIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPSKISQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + + SA +K +ID + R +V+ +G N GKSTL+N+I + +
Sbjct: 132 EGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINSIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
++N++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KE+KP+TY++ ++ + GL R D S E T + L LH K E
Sbjct: 238 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELKLHRTKLEG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K E+ K V+ F + + D+ +GLGW +R+
Sbjct: 296 ASAFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFTIKDKT------DLVISGLGW--IRVT 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + VW EGV +V R A++
Sbjct: 347 GTAKVAVWAPEGVAVVTRKAII 368
>gi|418975267|ref|ZP_13523176.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK1074]
gi|383348638|gb|EID26597.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK1074]
Length = 368
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 192/382 (50%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V C RC LRHY ++ DV L D DF KL+ G + ++V+ V+D DF+GS
Sbjct: 38 VYCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + VS GN V+LV K D+LP S+ P + W+ +RA E
Sbjct: 89 VIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGKISQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + + SA +K +ID + R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
++N++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KE+KP+TY++ ++ + GL R D S E T + L LH K E+
Sbjct: 238 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELKLHRTKLES 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K E+ K V+ F + + D+ +GLGW +R+
Sbjct: 296 ASAFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFTIKDKT------DLVISGLGW--IRVT 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + VW EGV ++ R A++
Sbjct: 347 GTAKVAVWAPEGVAVITRKAII 368
>gi|342164515|ref|YP_004769154.1| GTPase YqeH [Streptococcus pseudopneumoniae IS7493]
gi|341934397|gb|AEL11294.1| GTPase YqeH [Streptococcus pseudopneumoniae IS7493]
Length = 368
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 210/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D S E T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ K + F + + D+
Sbjct: 285 ELKLHRTKLEGASAFYDKHVGTLLTPP-NSKEKEDFPKLIEHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V+R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVIRKAII 368
>gi|422821793|ref|ZP_16869986.1| GTP-binding protein [Streptococcus sanguinis SK353]
gi|324990744|gb|EGC22680.1| GTP-binding protein [Streptococcus sanguinis SK353]
Length = 368
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 191/385 (49%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVQ----LTDDDF----LRLLHEVGDSDALVVNVVDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ ++ W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKDSKVTQWLTER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LID + R +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ +K+I+ T + PGTTL ++E L + ++DTPG++H +Q+ L+
Sbjct: 187 ITG-------DKDII---TTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLS 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYISPKKEIKPKTYQLNPNQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
E A +KH G L PP+G+++ EE V+ EF + + DI +GLGW +
Sbjct: 293 LEGASDFYDKHVGGLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W EGV +V R A++
Sbjct: 344 RVSGPARVAGWAPEGVAVVTRKAII 368
>gi|422860728|ref|ZP_16907372.1| GTP-binding protein [Streptococcus sanguinis SK330]
gi|327469111|gb|EGF14583.1| GTP-binding protein [Streptococcus sanguinis SK330]
Length = 368
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 191/385 (49%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVQ----LTDDDF----LRLLHEVGDSDALVVNVVDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ ++ W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKDSKVTQWLTER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LID + R +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ +K+I+ T + PGTTL ++E L + ++DTPG++H +Q+ L+
Sbjct: 187 ITG-------DKDII---TTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLS 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
E A +KH G L PP+G+++ EE V+ EF + + DI +GLGW +
Sbjct: 293 LEGASDFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W EGV +V R A++
Sbjct: 344 RVSGPARIAGWAPEGVAVVTRKAII 368
>gi|430827026|ref|ZP_19445194.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0164]
gi|431765842|ref|ZP_19554343.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E4215]
gi|430444572|gb|ELA54410.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0164]
gi|430627559|gb|ELB64050.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E4215]
Length = 369
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 137/452 (30%), Positives = 207/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q P GY P L K GL E
Sbjct: 7 CIGCGAVIQTNKPGELGY--TPQTALEK----------------------GLASGE---- 38
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
V C RC LRHY +++DV+ L D DF +L++ G + ++++
Sbjct: 39 ----------VYCQRCFRLRHYNEIQDVS----LTDDDF-----LRLLNELGQKDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + V D V+LV K+D+LP SL T+
Sbjct: 80 VVDIFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKVDILPKSLKKTKL 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+++RA E GI + L SA K+ + L++ + + R +V+ +G N GKSTL
Sbjct: 123 TQWMKERAYEAGIRPVDVL-LTSAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K+ AG + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIKNT-AG---------VQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ +++ KE+KP+ Y++ G ++ + GL R D + S + S
Sbjct: 229 QMAHYLGKKDLRIIAPLKEIKPKVYQLNEGQTLFLGGLARFDFISGNRASF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+ +H K E A +KH G LQPP VEE + VR EF V DI A
Sbjct: 287 VNIHRTKLEKADEFYQKHIGGLLQPP-RPNEVEEFPELVRFEFSV------KEKTDIVFA 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V A + W +GVD++ R AL+
Sbjct: 340 GLGWITV--TAPAVIAGWAPKGVDVLKRKALI 369
>gi|306829001|ref|ZP_07462192.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis ATCC 6249]
gi|304428806|gb|EFM31895.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis ATCC 6249]
Length = 368
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 209/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLLERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ + ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNSEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ K V F + + D+
Sbjct: 285 ELKLHRTKLEGASAFYDKHLGTLLTPP-NSKEKEDFPKLVEHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|417849907|ref|ZP_12495822.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK1080]
gi|339455240|gb|EGP67847.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK1080]
Length = 368
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 210/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ + ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNSEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ K V+ F++ D+
Sbjct: 285 ELKLHRTKLEGASAFYDKHVGTLLTPP-NSKEKEDFPKLVQHVFNI------KEKTDLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVIGTAKVAVWAPEGVAVVTRKAII 368
>gi|307706091|ref|ZP_07642910.1| conserved hypothetical protein [Streptococcus mitis SK321]
gi|307618491|gb|EFN97639.1| conserved hypothetical protein [Streptococcus mitis SK321]
Length = 368
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 190/382 (49%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V C RC LRHY ++ DV L D DF KL+ G + ++V+ V+D DF+GS
Sbjct: 38 VYCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + VS GN V+LV K D+LP S+ P + W+ +RA E
Sbjct: 89 VIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGKISQWLMERAYE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + + SA +K +ID + R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
++N++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KE+KP+TY++ ++ + GL R D + T + L LH K E
Sbjct: 238 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRTKLEG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K E+ K V+ F++ D+ +GLGW +R+
Sbjct: 296 ASAFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFNI------KEKTDLVISGLGW--IRVT 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + VW EGV +V R A++
Sbjct: 347 GTAKVAVWAPEGVAVVTRKAII 368
>gi|347534308|ref|YP_004840978.1| hypothetical protein LSA_06230 [Lactobacillus sanfranciscensis TMW
1.1304]
gi|345504364|gb|AEN99046.1| Uncharacterized protein yqeH [Lactobacillus sanfranciscensis TMW
1.1304]
Length = 368
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 134/451 (29%), Positives = 205/451 (45%), Gaps = 90/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+QDT+ GY +S L+ G L
Sbjct: 8 CIGCGALIQDTDKDKAGY-------------------TPKSAIEKGLESGELY------- 41
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
C RC LRHY +++ V V D +F H +G+ S+V+ V
Sbjct: 42 ------------CQRCFRLRHYNEIQPVDVS----DDEFLHLLGK----IGDTDSLVVYV 81
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD D +GS + + V GN P +++V K+DLLPSS ++ +
Sbjct: 82 VDIFDVNGSIIPGIQRFV----------------GNNP-ILVVGNKVDLLPSSFKESKIK 124
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ + GI I + VSA N + L++ V+ K +V+ +G N GKSTL+
Sbjct: 125 DWLRQMMNKAGIKPI-DIELVSAKTNRSVDDLLE-VIKKYQKNRDVYVVGVTNVGKSTLI 182
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I G+E+ I T + PGTTL ++++ L L DTPG++H +Q
Sbjct: 183 NQIIHQ------ASGQEQVI----TTSKFPGTTLDMIKIP--LDDGHDLIDTPGVIHASQ 230
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ ++ K V+ K +KP+ Y++ G ++ + + R D + TV+ L
Sbjct: 231 MAHYLSPKDLKYVSPQKRIKPKVYQLNDGQTLFLGAIGRFDYVKGPKTGF--TVYVDNNL 288
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTENA +KH G L PP+G++ V L R EF V +S D+ G
Sbjct: 289 MIHRTKTENADEFFDKHAGELLNPPLGKENVVPLQ---RHEFKVEDTS------DLVIEG 339
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V KG G W +GV +++R A+
Sbjct: 340 LGWVTVP-KGSIIAG-WAPKGVSVLIRKAMF 368
>gi|392330686|ref|ZP_10275301.1| GTP-binding protein YqeH [Streptococcus canis FSL Z3-227]
gi|391418365|gb|EIQ81177.1| GTP-binding protein YqeH [Streptococcus canis FSL Z3-227]
Length = 372
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 137/455 (30%), Positives = 212/455 (46%), Gaps = 92/455 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ +Q + K G+ P+ +LKKG E
Sbjct: 6 CIGCGIQVQTEDKKKAGF--TPAA---------------------ALKKG--------LE 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY + DV + D R L + ++V+ V
Sbjct: 35 TGEL-------YCQRCFRLRHYNDITDVHIT--------DDEFLRLLHEVGDSDALVVNV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS +++ VS GN V+LV K D+LP S+ +
Sbjct: 80 VDIFDFNGSIIPGLSRFVS---------------GN--DVLLVGNKKDILPKSVKDGKVT 122
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ +RA E+G+ + + SA + +K LI+ + L R NV+ +G N GKSTL+
Sbjct: 123 QWLVERAHEEGLRPL-DVMLTSAQNKYAIKELIERINTLRKGR-NVYVVGVTNVGKSTLI 180
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + V +K+++ T + PGTTL ++E L +FDTPG++H +Q
Sbjct: 181 NAIIQEVTG-------DKDVI---TTSRFPGTTLD--KIEIPLDDGTFIFDTPGIIHRHQ 228
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ ++ K+V+ KE+KP+TY++ ++ + GL R D S E T + L
Sbjct: 229 MAHYLSAKDLKVVSPKKEIKPKTYQLNPKQTLFLGGLARFDF--ISGERQGFTAFFDNEL 286
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A T +KH G L PP G+K + K VR EF + +D+ +G
Sbjct: 287 GLHRTKLTGADTFYDKHLGGLLTPP-GQKEAVDFPKLVRHEFVI------DQKMDLVFSG 339
Query: 504 LGWFSVRLKGEAAL----GVWTYEGVDIVLRNALL 534
LGW +R+ G+ L W EGV +++R A++
Sbjct: 340 LGW--IRINGQKELKTKIAAWAPEGVAVLVRKAII 372
>gi|418976181|ref|ZP_13524067.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK575]
gi|383351855|gb|EID29618.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK575]
Length = 368
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 209/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ K V+ F++ D+
Sbjct: 285 ELKLHRTKLEGASAFYDKHVGTLLTPP-NSKEKEDFPKLVQHVFNI------KEKTDLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|419783378|ref|ZP_14309166.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK610]
gi|383182262|gb|EIC74820.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK610]
Length = 368
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 139/453 (30%), Positives = 210/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D S E T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ K V+ F + + D+
Sbjct: 285 ELKLHRTKLEGASAFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFIIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|414157031|ref|ZP_11413331.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. F0442]
gi|410868347|gb|EKS16312.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. F0442]
Length = 368
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 142/456 (31%), Positives = 210/456 (46%), Gaps = 98/456 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q N + GY P L K GL E
Sbjct: 6 CIGCGAPIQTENKEGLGY--TPQSALEK----------------------GL-------E 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
T EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 35 TGEV-------YCQRCFRLRHYNEITDVH----LTDDDF-----LKLLHEVGDSDALVVN 78
Query: 203 VVDAADFDGS----FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLS 258
VVD DF+GS PR VA GN V+LV K D+LP S+
Sbjct: 79 VVDIFDFNGSVIPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVK 117
Query: 259 PTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAG 318
++ HW+ +RA E+G+ + + SA +K L++ + R +V+ +G N G
Sbjct: 118 DSKVTHWLMERAHEEGMRPVDVV-LTSAQNKSAIKDLMEKIEQYRKGR-DVYVVGVTNVG 175
Query: 319 KSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGL 378
KSTL+NAI + + +K+I+ T + PGTTL ++E L + ++DTPG+
Sbjct: 176 KSTLINAIIQEITG-------DKDII---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGI 223
Query: 379 LHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVW 438
+H +Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + + T +
Sbjct: 224 IHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIKGEKQGF--TAF 281
Query: 439 ASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVD 498
L LH K E A +KH G L PP K EE V EF + + D
Sbjct: 282 FDNELKLHRTKLEGATAFYDKHVGGLLTPP-NSKEKEEFPPLVSHEFTIKDKT------D 334
Query: 499 IAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+ +GLGW +R+ G+A + VW EGV +V R A++
Sbjct: 335 LVISGLGW--IRVNGKAKVAVWAPEGVTVVTRKAII 368
>gi|422846086|ref|ZP_16892769.1| GTP-binding protein [Streptococcus sanguinis SK72]
gi|325688137|gb|EGD30156.1| GTP-binding protein [Streptococcus sanguinis SK72]
Length = 368
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 191/385 (49%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVQ----LTDDDF----LRLLHEVGDSDALVVNVVDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ ++ W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKDSKVTQWLTER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LID + R +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKELIDKIEHCRKGR-DVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ +K+I+ T + PGTTL ++E L + ++DTPG++H +Q+ L+
Sbjct: 187 ITG-------DKDII---TTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLS 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
E A +KH G L PP+G+++ EE V+ EF + + DI +GLGW +
Sbjct: 293 LEGASDFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W EGV +V R A++
Sbjct: 344 RVSGPARVAGWAPEGVAVVTRKAII 368
>gi|125717436|ref|YP_001034569.1| GTP-binding protein YqeH [Streptococcus sanguinis SK36]
gi|125497353|gb|ABN44019.1| Conserved GTPase, putative [Streptococcus sanguinis SK36]
Length = 368
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 191/385 (49%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVQ----LTDDDF----LRLLHEVGDSDALVVNVVDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ ++ W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKDSKVTQWLTER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LID + R +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ +K+I+ T + PGTTL ++E L + ++DTPG++H +Q+ L+
Sbjct: 187 ITG-------DKDII---TTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLS 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
E A +KH G L PP+G+++ EE V+ EF + + DI +GLGW +
Sbjct: 293 LEGASDFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W EGV +V R A++
Sbjct: 344 RVSGPARVAGWAPEGVAVVTRKAII 368
>gi|401682347|ref|ZP_10814241.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. AS14]
gi|400184783|gb|EJO19021.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. AS14]
Length = 368
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 192/385 (49%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVQ----LTDDDF----LRLLHEVGDSDALVVNVVDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ ++ W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKDSKVTQWLMER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LID + + K +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKDLIDKI-EYCRKGRDVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ +K+I+ T + PGTTL ++E L + ++DTPG++H +Q+ L+
Sbjct: 187 ITG-------DKDII---TTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLS 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYISPKKEIKPKTYQLNPNQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
E A +KH G L PP+G+++ +E V+ EF + + DI +GLGW +
Sbjct: 293 LEGASDFYDKHVGSLLVPPVGKEK-KEFPALVKHEFTIKDKT------DIVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W EGV +V R A++
Sbjct: 344 RVSGPARVAGWAPEGVAVVTRKAII 368
>gi|306834207|ref|ZP_07467327.1| ribosome biogenesis GTPase YqeH [Streptococcus bovis ATCC 700338]
gi|304423780|gb|EFM26926.1| ribosome biogenesis GTPase YqeH [Streptococcus bovis ATCC 700338]
Length = 372
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 194/384 (50%), Gaps = 52/384 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
+ C RC LRHY ++ DV + D + L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEITDVHIT--------DDEFLKLLHEVGDSDALVVNVVDIFDFNGSV 89
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + VS GN V+LV K D+LP S+ ++ W+ +RA E+
Sbjct: 90 IPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKDSKVTQWLTERAHEE 132
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG-NVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + + SA + +K LI+ + L +RG +V+ +G N GKSTL+NAI K +
Sbjct: 133 GLRPVDVI-LTSAQNHQAIKDLIEKIEKL--RRGRDVYVVGVTNVGKSTLINAIIKEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
EK+I+ T + PGTTL ++E L + +FDTPG++H +Q+ L +
Sbjct: 190 -------EKDII---TTSRFPGTTLD--KIEIPLDDGSYIFDTPGIIHRHQMAHYLGDKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K ++ KE+KP+TY++ ++ +AGL R D + T + L LH K
Sbjct: 238 LKYISPKKEIKPKTYQLNPEQTLFLAGLGRFDFISGDKQGF--TAYFDNNLKLHRTKLAG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PPI +K + + K VR EF + + +D+ +GLGW ++
Sbjct: 296 ADAFYDKHVGSLLTPPI-DKELADFPKLVRHEFTI------KAKMDVVYSGLGWIRIKAS 348
Query: 513 GEAALGV--WTYEGVDIVLRNALL 534
++++ + W EGV ++LR AL+
Sbjct: 349 QDSSVKIAAWAPEGVAVLLRKALI 372
>gi|50913635|ref|YP_059607.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS10394]
gi|50902709|gb|AAT86424.1| GTP-binding protein [Streptococcus pyogenes MGAS10394]
gi|94543275|gb|ABF33323.1| GTP-binding protein [Streptococcus pyogenes MGAS10270]
Length = 372
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 210/455 (46%), Gaps = 92/455 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ +Q + + G+ P+ +LKKG E
Sbjct: 6 CIGCGIQIQTEDKEKAGF--TPAA---------------------ALKKG--------ME 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ DV + D R L + ++V+ V
Sbjct: 35 TGEL-------YCQRCFRLRHYNEITDVHIT--------DDEFLRLLHEVGDSDALVVNV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+GS +++ +S GN V+LV K D+LP S+ +
Sbjct: 80 IDIFDFNGSIIPGLSRFIS---------------GN--DVLLVGNKKDILPKSVKDGKVT 122
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ +RA E+G+ + + SA + +K LI+ + +L R +V+ +G N GKSTL+
Sbjct: 123 QWLAERAHEEGLRPLDVM-LTSAQNKYAIKDLIERINELRNGR-DVYVVGVTNVGKSTLI 180
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + + + +T + PGTTL ++E L +FDTPG++H +Q
Sbjct: 181 NAIIQEITGNK----------DVITTSRFPGTTLD--KIEIPLDDGTFIFDTPGIIHRHQ 228
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ +E K+V+ KE+KP+TY++ ++ + GL R D + T + L
Sbjct: 229 MAHYLSPKELKIVSPKKEIKPKTYQLNPEQTLFLGGLSRFDFINGERQGF--TAFFDNQL 286
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A +KH G L PP G+K + K VR EF + +DI +G
Sbjct: 287 ELHRTKLAGANAFYDKHVGTLLTPP-GKKELTAFPKLVRHEFTI------DQKMDIVFSG 339
Query: 504 LGWFSVRLKGE----AALGVWTYEGVDIVLRNALL 534
LGW +R+ G+ A + W EGV +++R A++
Sbjct: 340 LGW--IRVNGQKDSKAIVAAWAPEGVAVIVRKAII 372
>gi|293571008|ref|ZP_06682051.1| nitric-oxide synthase [Enterococcus faecium E980]
gi|424833434|ref|ZP_18258158.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R501]
gi|424984138|ref|ZP_18396689.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV69]
gi|424987609|ref|ZP_18399980.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV38]
gi|430829410|ref|ZP_19447503.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0269]
gi|430833624|ref|ZP_19451635.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0679]
gi|430836932|ref|ZP_19454908.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0680]
gi|430839014|ref|ZP_19456956.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0688]
gi|430840824|ref|ZP_19458746.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1007]
gi|430859776|ref|ZP_19477385.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1552]
gi|430869739|ref|ZP_19482939.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1575]
gi|431067593|ref|ZP_19494012.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1604]
gi|431099487|ref|ZP_19496653.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1613]
gi|431188241|ref|ZP_19500153.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1620]
gi|431738177|ref|ZP_19527122.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1972]
gi|431741776|ref|ZP_19530677.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2039]
gi|431745631|ref|ZP_19534475.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2134]
gi|291608934|gb|EFF38213.1| nitric-oxide synthase [Enterococcus faecium E980]
gi|402922555|gb|EJX42921.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R501]
gi|402969777|gb|EJX86163.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV69]
gi|402974021|gb|EJX90095.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV38]
gi|430480849|gb|ELA58020.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0269]
gi|430486029|gb|ELA62897.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0679]
gi|430487713|gb|ELA64421.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0680]
gi|430491011|gb|ELA67493.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0688]
gi|430494780|gb|ELA71009.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1007]
gi|430543313|gb|ELA83388.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1552]
gi|430559428|gb|ELA98778.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1575]
gi|430568018|gb|ELB07076.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1604]
gi|430570988|gb|ELB09927.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1613]
gi|430572523|gb|ELB11375.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1620]
gi|430597615|gb|ELB35398.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1972]
gi|430601118|gb|ELB38734.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2039]
gi|430610387|gb|ELB47539.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2134]
Length = 369
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 137/452 (30%), Positives = 207/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q P GY P L K GL E
Sbjct: 7 CIGCGAVIQTNKPGELGY--TPQTALEK----------------------GLASGE---- 38
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
V C RC LRHY +++DV+ L D DF +L++ G + ++++
Sbjct: 39 ----------VYCQRCFRLRHYNEIQDVS----LTDDDF-----LRLLNELGQKDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + V D V+LV K+D+LP SL T+
Sbjct: 80 VVDIFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKVDILPKSLKKTKL 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+++RA E GI + L SA K+ + L++ + + R +V+ +G N GKSTL
Sbjct: 123 TQWMKERAYEAGIRPVDVL-LTSAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K+ AG + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIKNT-AG---------VQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ +++ KE+KP+ Y++ G ++ + GL R D + S + S
Sbjct: 229 QMAHYLGKKDLRIIAPLKEIKPKVYQLNEGQTLFLGGLARFDFISGNRASF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+ +H K E A +KH G LQPP VEE + VR EF V DI A
Sbjct: 287 VNIHRTKLEKADEFYQKHVGGLLQPP-RPNEVEEFPELVRFEFSV------KEKTDIVFA 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V A + W +GVD++ R AL+
Sbjct: 340 GLGWITV--TAPAVIAGWAPKGVDVLKRKALI 369
>gi|408401050|ref|YP_006859013.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis
RE378]
gi|407967278|dbj|BAM60516.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis
RE378]
Length = 372
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 210/455 (46%), Gaps = 92/455 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ +Q + + G+ P+ +LKKG E
Sbjct: 6 CIGCGIQIQTEDKEKAGF--TPAA---------------------ALKKG--------ME 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ DV + D R L + ++V+ V
Sbjct: 35 TGEL-------YCQRCFRLRHYNEITDVHIT--------DDEFLRLLHEVGDSDALVVNV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+GS +++ +S GN V+LV K D+LP S+ +
Sbjct: 80 IDIFDFNGSIIPGLSRFIS---------------GN--DVLLVGNKKDILPKSVKDGKVT 122
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ +RA E+G+ + + SA + +K LI+ + +L R +V+ +G N GKSTL+
Sbjct: 123 QWLTERAHEEGLRPLDVM-LTSAQNKYAIKDLIERINELRNGR-DVYVVGVTNVGKSTLI 180
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + + + +T + PGTTL ++E L +FDTPG++H +Q
Sbjct: 181 NAIIQEITGNK----------DVITTSRFPGTTLD--KIEIPLDDGTFIFDTPGIIHRHQ 228
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ +E K+V+ KE+KP+TY++ ++ + GL R D + T + L
Sbjct: 229 MAHYLSPKELKIVSPKKEIKPKTYQLNPEQTLFLGGLSRFDFINGERQGF--TAFFDNQL 286
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A +KH G L PP G+K + K VR EF + +DI +G
Sbjct: 287 ELHRTKLAGADAFYDKHVGTLLTPP-GKKELTAFPKLVRHEFTI------DQKMDIVFSG 339
Query: 504 LGWFSVRLKGE----AALGVWTYEGVDIVLRNALL 534
LGW +R+ G+ A + W EGV +++R A++
Sbjct: 340 LGW--IRVNGQKDSKAIVAAWAPEGVAVIVRKAII 372
>gi|419781006|ref|ZP_14306838.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK100]
gi|383184398|gb|EIC76912.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK100]
Length = 368
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 191/382 (50%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V C RC LRHY ++ DV L D DF KL+ G + ++V+ V+D DF+GS
Sbjct: 38 VYCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + VS GN V+LV K D+LP S+ P + W+ +RA E
Sbjct: 89 VIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGKISQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + + SA ++ +ID + R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPVDVV-LTSAQNKHAIREVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
++N++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KE+KP+TY++ ++ + GL R D S E T + L LH K E
Sbjct: 238 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELKLHRTKLEG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K E+ K V+ F + + D+ +GLGW +R+
Sbjct: 296 ASAFYDKHLGTLLTPP-NNKEKEDFPKLVQHVFTIKDKT------DLVISGLGW--IRVT 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + VW EGV +V R A++
Sbjct: 347 GTAKVAVWAPEGVAVVTRKAII 368
>gi|294501323|ref|YP_003565023.1| GTP-binding protein [Bacillus megaterium QM B1551]
gi|294351260|gb|ADE71589.1| GTP-binding protein [Bacillus megaterium QM B1551]
Length = 368
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 214/452 (47%), Gaps = 92/452 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q P GY P L K
Sbjct: 8 CVGCGVEIQTERPDELGY--APKSALEK-------------------------------- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ ++C RC L+HY +V+DV+ L D DF K+++ G +V+
Sbjct: 34 --------EAIICQRCFRLKHYNEVQDVS----LTDDDF-----LKILNGIGQTDGLVVK 76
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS+ + + V + +V+LV K DLLP S+ +
Sbjct: 77 VVDIFDFNGSWLPGLHRFVGNN-----------------KVLLVGNKADLLPKSIKKNKL 119
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
HW+++ A+E G+ + + +SA K G++ I + ++ + +V+ +G N GKST
Sbjct: 120 IHWMKREAKELGLKSVD-VFLMSAQKGQGIRE-IAEAIEHYREGKDVYVVGCTNVGKSTF 177
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI K V EK+I+ T + PGTTL ++ + L A L+DTPG+++ +
Sbjct: 178 INAIIKEVTG-------EKDII---TTSQYPGTTLDMIDIP--LDNGASLYDTPGIINHH 225
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ + + + KL++ KE+KP+ Y++ G +++ GL R+D + +S+ T + S
Sbjct: 226 QMAHYVDKRDLKLISPKKEIKPKVYQLNEGQTLYFGGLARLDYVQGGRKSL--TCYVSND 283
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K E A + EK G LQPP E +++E + V EF + + DI +
Sbjct: 284 LHIHRTKLEKADELYEKQAGELLQPPRPE-QMDEFPELVAHEFTIK-----NEKTDIVFS 337
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V G + +GV + +R++L+
Sbjct: 338 GLGWVTVNESGSKVVA-HAPKGVGVFVRDSLI 368
>gi|375309512|ref|ZP_09774793.1| hypothetical protein WG8_3318 [Paenibacillus sp. Aloe-11]
gi|375078821|gb|EHS57048.1| hypothetical protein WG8_3318 [Paenibacillus sp. Aloe-11]
Length = 375
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 207/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ MQ T+P+ PGY P + L +
Sbjct: 13 CSGCGITMQTTSPELPGYI--PEKLLTR-------------------------------- 38
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
+PV+C RC +++Y + VTV D KL+S G + ++V+
Sbjct: 39 --------EPVICQRCFRIKNYNETSSVTV---------DQDEFLKLLSQIGDKDALVIH 81
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
+VD DF+GS + + V G+ P V+L V K DLLP + +
Sbjct: 82 IVDIFDFEGSLISGLQRFV----------------GSNP-VILAVNKTDLLPKVTNWNKV 124
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+WV+++A+E G+ + + SA KN G L+D V +L R +V+ +GA N GKSTL
Sbjct: 125 RNWVQKQAKEQGL-RTADIVLCSAKKNQGFDRLLDVVSELRDNR-DVYVVGATNVGKSTL 182
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N + + + ++ LT + PGTTL +V + L + DTPG+++P
Sbjct: 183 INRLIR----------DYSDMEQELTTSRYPGTTLDMVNIP--LDDGKHIIDTPGIVYPW 230
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
+ + ++R + + +K LKP Y++ +G ++ G+ R D E +S T + +
Sbjct: 231 RFSEIVSRRDLSAIMPDKPLKPAAYQLDSGQTLFFGGMGRFDFIEGQHQSF--TCYINGG 288
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K E A + H G L PP ++ + E+ +W R EF V + DI +
Sbjct: 289 LKIHRTKLERADQLFADHAGELLSPPTRDQ-LAEMPEWTRHEFRVP----RKAPSDIYIS 343
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW V A + V G+ ++LR AL+
Sbjct: 344 GLGWIRVNSDSGALVAVHVPRGIRVLLRPALI 375
>gi|307710602|ref|ZP_07647036.1| conserved hypothetical protein [Streptococcus mitis SK564]
gi|307618647|gb|EFN97789.1| conserved hypothetical protein [Streptococcus mitis SK564]
Length = 368
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 208/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGLRPVDVV-LTSAQNKQAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A KH G L PP K E+ K V+ F++ D+
Sbjct: 285 ELKLHRTKLEGASAFYNKHVGTLLTPP-NSKEKEDFPKLVQHVFNI------KEKTDLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|331266921|ref|YP_004326551.1| GTP-binding protein [Streptococcus oralis Uo5]
gi|326683593|emb|CBZ01211.1| GTP-binding protein [Streptococcus oralis Uo5]
Length = 368
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 141/453 (31%), Positives = 208/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + GD + +T + PGTTL ++E L A ++DTPG++H
Sbjct: 179 LINAIIQEIT----GDQDV------ITTSRFPGTTLD--KIEIPLDDGAYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D S E T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A KH G L PP K E+ K V+ F + + D+
Sbjct: 285 ELKLHRTKLEGASAFYNKHLGTLLTPP-NSKEKEDFPKLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGSAKVAVWAPEGVAVVTRKAII 368
>gi|227530476|ref|ZP_03960525.1| GTP-binding protein YqeH [Lactobacillus vaginalis ATCC 49540]
gi|227349581|gb|EEJ39872.1| GTP-binding protein YqeH [Lactobacillus vaginalis ATCC 49540]
Length = 375
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 139/451 (30%), Positives = 208/451 (46%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T+PK PGY + ++L+KG
Sbjct: 13 CIGCGAKIQTTDPKEPGYTPQ-----------------------SALEKG---------- 39
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+K +E + C RC LRHY ++ V+ L D DF R L ++++ V
Sbjct: 40 ---LKNNE--LYCQRCFRLRHYNEIAPVS----LSDDDF----LRLLSQIRNDDALIVYV 86
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS + + V G+ P V+LV K DLLP SL +
Sbjct: 87 VDIFDFNGSIIPGLHRFV----------------GSNP-VLLVGNKEDLLPRSLRRPKLR 129
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ+A G+ I + VSA KN + L++ V+D + +V+ +G N GKSTL+
Sbjct: 130 DWLRQQANLAGLRPIDTV-LVSAKKNHQIDYLLE-VIDKYRQGRDVYFVGVTNVGKSTLV 187
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K + I +T + PGTTL ++E L +L DTPG++H +Q
Sbjct: 188 NQIIK----------RQTGIKELITTSKFPGTTLD--KIEIPLDDGHQLIDTPGIIHQHQ 235
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ ++ K V+ KE+KPRTY++ +I I G+ R D I + L
Sbjct: 236 MAHVLSAKDLKYVSPQKEIKPRTYQLDPEQTIFIGGVARFDYLTGHHAGI--IAYFDNNL 293
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
PLH K NA EKH G L PP ++ ++E R+EFH+S S D+ G
Sbjct: 294 PLHRTKLGNADRFYEKHLGELLTPPTKDE-LKEFPPLERQEFHLSEKS------DVVFEG 346
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V + W +GV ++R A++
Sbjct: 347 LGWITV--PAGTTVAAWVPKGVSSLVRRAMI 375
>gi|385262972|ref|ZP_10041069.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. SK643]
gi|385188947|gb|EIF36417.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. SK643]
Length = 368
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 208/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ K V F + + D+
Sbjct: 285 ELKLHRTKLEGASAFYDKHLGTLLTPP-NSKEKEDFPKLVEHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|383479447|ref|YP_005388341.1| GTP-binding protein [Streptococcus pyogenes MGAS15252]
gi|383493371|ref|YP_005411047.1| GTP-binding protein [Streptococcus pyogenes MGAS1882]
gi|378927437|gb|AFC65643.1| GTP-binding protein [Streptococcus pyogenes MGAS15252]
gi|378929099|gb|AFC67516.1| GTP-binding protein [Streptococcus pyogenes MGAS1882]
Length = 372
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 210/455 (46%), Gaps = 92/455 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ +Q + + G+ P+ +LKKG E
Sbjct: 6 CIGCGIQIQTEDKEKAGF--TPAA---------------------ALKKG--------ME 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ DV + D R L + ++V+ V
Sbjct: 35 TGEL-------YCQRCFRLRHYNEITDVHIT--------DDEFLRLLHEVGDSDALVVNV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+GS +++ +S GN V+LV K D+LP S+ +
Sbjct: 80 IDIFDFNGSIIPGLSRFIS---------------GN--DVLLVGNKKDILPKSVKDGKVT 122
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ +RA E+G+ + + SA + +K LI+ + +L R +V+ +G N GKSTL+
Sbjct: 123 QWLTERAHEEGLRPL-DVMLTSAQNKYAIKYLIERINELRNGR-DVYVVGVTNVGKSTLI 180
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + + + +T + PGTTL ++E L +FDTPG++H +Q
Sbjct: 181 NAIIQEITGNK----------DVITTSRFPGTTLD--KIEIPLDDGTFIFDTPGIIHRHQ 228
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ +E K+V+ KE+KP+TY++ ++ + GL R D + T + L
Sbjct: 229 MAHYLSPKELKIVSPKKEIKPKTYQLNPEQTLFLGGLSRFDFINGERQGF--TAFFDNQL 286
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A +KH G L PP G+K + K VR EF + +DI +G
Sbjct: 287 ELHRTKLAGADAFYDKHVGTLLTPP-GKKELTAFPKLVRHEFTI------DQKMDIVFSG 339
Query: 504 LGWFSVRLKGE----AALGVWTYEGVDIVLRNALL 534
LGW +R+ G+ A + W EGV +++R A++
Sbjct: 340 LGW--IRVNGQKDSKAIVAAWAPEGVAVIVRKAII 372
>gi|295706670|ref|YP_003599745.1| GTP-binding protein [Bacillus megaterium DSM 319]
gi|294804329|gb|ADF41395.1| GTP-binding protein [Bacillus megaterium DSM 319]
Length = 368
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 200/382 (52%), Gaps = 50/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
++C RC L+HY +V+DV+ L D DF K+++ G +V+ VVD DF+GS
Sbjct: 36 IICQRCFRLKHYNEVQDVS----LTDDDF-----LKILNGIGQTDGLVVKVVDIFDFNGS 86
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + + V + +V+LV K DLLP S+ + HW+++ A+E
Sbjct: 87 WLPGLHRFVGNN-----------------KVLLVGNKADLLPKSIKKNKLIHWMKREAKE 129
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + + +SA K G++ I + ++ + +V+ +G N GKST +NAI K V
Sbjct: 130 LGLKSVD-VFLMSAQKGQGIRE-IAEAIEHYREGKDVYVVGCTNVGKSTFINAIIKEVTG 187
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
EK+I+ T + PGTTL ++ + L A L+DTPG+++ +Q+ + + +
Sbjct: 188 -------EKDII---TTSQYPGTTLDMIDIP--LDNGASLYDTPGIINHHQMAHYVDKRD 235
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
KL++ KE+KP+ Y++ G +++ GL R+D + +S+ T + S L +H K E
Sbjct: 236 LKLISPKKEIKPKVYQLNEGQTLYFGGLARLDYVQGGRKSL--TCYVSNDLHIHRTKLEK 293
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A + EK G LQPP E +++E + V EF + + DI +GLGW +V
Sbjct: 294 ADELYEKQAGELLQPPRPE-QMDEFPELVAHEFTIK-----NEKTDIVFSGLGWVTVNES 347
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G + +GV + +R++L+
Sbjct: 348 GSKVVA-HAPKGVGVFVRDSLI 368
>gi|312863524|ref|ZP_07723762.1| ribosome biogenesis GTPase YqeH [Streptococcus vestibularis F0396]
gi|311101060|gb|EFQ59265.1| ribosome biogenesis GTPase YqeH [Streptococcus vestibularis F0396]
Length = 372
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 197/396 (49%), Gaps = 56/396 (14%)
Query: 145 SEVKKHEKP--VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
S +KK E+ + C RC LRHY ++ DV + D + L + ++V+
Sbjct: 27 SSIKKAEETGELYCQRCFRLRHYNEIVDVHIT--------DDEFLKLLHEVGDSDALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS +++ VS GN V+LV K D+L S+ +
Sbjct: 79 VVDIFDFNGSIIPGLSRFVS---------------GN--DVLLVGNKKDILSKSVKDGKV 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + + SA + +K LI + L R +V+ +G N GKSTL
Sbjct: 122 TQWLTERAHEEGMRPVDVM-LTSAQNHHAIKELIQRIEKLRKGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI K + +K+I+ T + PGTTL ++E L +FDTPG++H +
Sbjct: 180 INAIIKEITG-------DKDII---TTSRFPGTTLD--KIEIPLDDGTYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ ++ K V+ KE+KP+TY++ A ++ + GL R D + + T +
Sbjct: 228 QMAHYLSAKDLKYVSPKKEIKPKTYQLNASQTLFLGGLGRFDFIDGDKQGF--TAFFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K E A +KH G L PP G K + K VR EF V + DI +
Sbjct: 286 LKLHRTKLEGADAFYDKHVGSLLMPP-GPKELANFPKLVRHEFTVKDKT------DIVFS 338
Query: 503 GLGWFSVRLKGEA----ALGVWTYEGVDIVLRNALL 534
GLGW +R++G+A + W EGV +V+R A++
Sbjct: 339 GLGW--IRVQGKADQPTIVAAWAPEGVGVVVRKAII 372
>gi|323353254|ref|ZP_08087787.1| GTP-binding protein [Streptococcus sanguinis VMC66]
gi|322121200|gb|EFX92963.1| GTP-binding protein [Streptococcus sanguinis VMC66]
Length = 368
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 191/385 (49%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVQ----LTDDDF----LRLLHEVGDSDALVVNVVDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ ++ W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKDSKVTQWLTER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LID + R +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ +K+I+ T + PGTTL ++E L + ++DTPG++H +Q+ L+
Sbjct: 187 ITG-------DKDII---TTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLS 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYISPKKEIKPKTYQLNPNQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
E A +KH G L PP+G+++ EE V+ EF + + DI +GLGW +
Sbjct: 293 LEGASDFYDKHVGGLLVPPVGKEK-EEFPTLVKHEFTIKDKT------DIVFSGLGW--L 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W EGV +V R A++
Sbjct: 344 RVSGPARVAGWAPEGVAVVTRKAII 368
>gi|336064941|ref|YP_004559800.1| putative GTPase [Streptococcus pasteurianus ATCC 43144]
gi|334283141|dbj|BAK30714.1| putative GTPase [Streptococcus pasteurianus ATCC 43144]
Length = 372
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 194/384 (50%), Gaps = 52/384 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
+ C RC LRHY ++ DV + D + L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEITDVHIT--------DDEFLKLLHEVGDSDALVVNVVDIFDFNGSV 89
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + VS GN V+LV K D+LP S+ ++ W+ +RA E+
Sbjct: 90 IPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKDSKVTQWLTERAHEE 132
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG-NVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + + SA + +K LI+ + L +RG +V+ +G N GKSTL+NAI K +
Sbjct: 133 GLRPVDVI-LTSAQNHQAIKDLIEKIEKL--RRGRDVYVVGVTNVGKSTLINAIIKEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
EK+I+ T + PGTTL ++E L + +FDTPG++H +Q+ L +
Sbjct: 190 -------EKDII---TTSRFPGTTLD--KIEIPLDDGSYIFDTPGIIHRHQMAHYLGDKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K ++ KE+KP+TY++ ++ +AGL R D + T + L LH K
Sbjct: 238 LKYISPKKEIKPKTYQLNPEQTLFLAGLGRFDFISGDKQGF--TAYFDNNLKLHRTKLAG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A + +KH G L PPI +K + + K VR EF + + +D+ +GLGW ++
Sbjct: 296 ADALYDKHVGSLLTPPI-DKELADFPKLVRHEFTI------KAKMDVVYSGLGWIRIKAS 348
Query: 513 GEAALGV--WTYEGVDIVLRNALL 534
++ + + W EGV ++LR AL+
Sbjct: 349 QDSPVKIAAWAPEGVAVLLRKALI 372
>gi|422881687|ref|ZP_16928143.1| GTP-binding protein [Streptococcus sanguinis SK355]
gi|332363929|gb|EGJ41708.1| GTP-binding protein [Streptococcus sanguinis SK355]
Length = 368
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 190/385 (49%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVQ----LTDDDF----LRLLHEVGDSDALVVNVVDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR +A GN V+LV K D+LP S+ ++ W+ +R
Sbjct: 90 IPGLPRFIA-------------------GN--DVLLVGNKKDILPKSVKDSKVTQWLTER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LID + R +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ +K+I+ T + PGTTL ++E L + ++DTPG++H +Q+ L+
Sbjct: 187 ITG-------DKDII---TTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLS 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 ANNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
E A +KH G L PP+G+++ EE V+ EF + + DI +GLGW +
Sbjct: 293 LEGASGFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W EGV +V R A++
Sbjct: 344 RVSGPARVAGWAPEGVTVVTRKAII 368
>gi|422825769|ref|ZP_16873948.1| GTP-binding protein [Streptococcus sanguinis SK678]
gi|324995205|gb|EGC27117.1| GTP-binding protein [Streptococcus sanguinis SK678]
Length = 368
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 190/385 (49%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVQ----LTDDDF----LRLLHEVGDSDALVVNVVDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ + W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKDGKVTQWLTER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LID + R +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ +K+I+ T + PGTTL ++E L + ++DTPG++H +Q+ L+
Sbjct: 187 ITG-------DKDII---TTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLS 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K V+ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
E A +KH G L PP+G+++ EE V+ EF + + DI +GLGW +
Sbjct: 293 LEGASDFYDKHVGSLLVPPVGKEK-EEFPALVKHEFIIKDKT------DIVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W EGV +V R A++
Sbjct: 344 RVSGPARVASWAPEGVAVVTRKAII 368
>gi|322377769|ref|ZP_08052258.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. M334]
gi|321281192|gb|EFX58203.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. M334]
Length = 368
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 209/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ K V+ F + + D+
Sbjct: 285 ELKLHRTKLEGASAFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|406577139|ref|ZP_11052757.1| GTPase YqeH [Streptococcus sp. GMD6S]
gi|404460314|gb|EKA06584.1| GTPase YqeH [Streptococcus sp. GMD6S]
Length = 368
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 209/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D S E T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ K V+ F + + D+
Sbjct: 285 ELKLHRTKLEGASAFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R ++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKVII 368
>gi|336395193|ref|ZP_08576592.1| GTPase YqeH [Lactobacillus farciminis KCTC 3681]
Length = 370
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 213/451 (47%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q + PG F++ S +LKK E++
Sbjct: 9 CIGCGAKLQTEDKDKPG-FVQAS----------------------TLKK------YTEDD 39
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ E+ +C RC LR+Y ++ DV V D DF + L S S ++V+ V
Sbjct: 40 SKEL-------LCKRCFRLRNYNEITDVDVS----DDDF----LKLLDSISSKDALVVNV 84
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD D++GS + + V D ++++V K+DLLP+S++ R
Sbjct: 85 VDIFDYEGSVIPGLQRFVGD-----------------KKILMVGNKVDLLPASVNQNRLL 127
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+W++Q+++E+GI + ++ VSAVK + L++ +++ +V+ +G N GKSTL+
Sbjct: 128 NWLQQKSKENGIKSVDQI-MVSAVKGINIDKLME-MIEKYRDGKDVYVVGTTNTGKSTLI 185
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I S +I +T + PGTTL R++ L L DTPG++H Q
Sbjct: 186 NRIISS----------NSDIKDLITTSRFPGTTLD--RIDIPLDDGHSLIDTPGIIHRYQ 233
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L ++ K V K L+P T++++ G +I +AGL R+D E VT + + L
Sbjct: 234 LAHFLNAKDLKTVTPKKPLRPATFQLRDGQTIFVAGLARLDFLN---ERTNVTFYVNQGL 290
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
PLH KT NA EKH G L PP ++E K+ + F S DI G
Sbjct: 291 PLHRTKTVNADEFYEKHLGDILTPPTD---IKEFPKFKSQIFSAHEKS------DIVIYG 341
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW V + + + +GV + +RNA++
Sbjct: 342 LGW--VTIPAGTKVKAYVPDGVHVSIRNAII 370
>gi|319946393|ref|ZP_08020630.1| GTP-binding protein [Streptococcus australis ATCC 700641]
gi|417919967|ref|ZP_12563488.1| ribosome biogenesis GTPase YqeH [Streptococcus australis ATCC
700641]
gi|319747361|gb|EFV99617.1| GTP-binding protein [Streptococcus australis ATCC 700641]
gi|342831523|gb|EGU65839.1| ribosome biogenesis GTPase YqeH [Streptococcus australis ATCC
700641]
Length = 368
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 127/386 (32%), Positives = 192/386 (49%), Gaps = 60/386 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V C RC LRHY ++ DV L D DF KL+ G + ++V+ VVD DF+GS
Sbjct: 38 VYCQRCFRLRHYNEITDVH----LTDDDF-----LKLLHEVGDSDALVVNVVDIFDFNGS 88
Query: 213 ----FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQ 268
PR VA GN V+LV K D+LP S+ ++ HW+ +
Sbjct: 89 VIPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKDSKVTHWLME 127
Query: 269 RAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAK 328
RA E+G+ + + SA +K L++ + R +V+ +G N GKSTL+NAI +
Sbjct: 128 RAHEEGMRPVDVV-LTSAQNKSAIKDLMEKIEQHRKGR-DVYVVGVTNVGKSTLINAIIQ 185
Query: 329 SVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRL 388
+ +K+I+ T + PGTTL ++E L + ++DTPG++H +Q+ L
Sbjct: 186 EITG-------DKDII---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYL 233
Query: 389 TREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMG 448
T + K V+ KE+KP+TY++ ++ + GL R D + + T + L LH
Sbjct: 234 TAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIKGEKQGF--TAFFDNELKLHRT 291
Query: 449 KTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFS 508
K E A +KH G L PP K EE V EF + + D+ +GLGW
Sbjct: 292 KLEGATAFYDKHVGGLLTPP-NSKEKEEFPPLVSHEFTIKDKT------DLVISGLGW-- 342
Query: 509 VRLKGEAALGVWTYEGVDIVLRNALL 534
+R+ GEA + VW EGV +V R A++
Sbjct: 343 IRVNGEARVAVWAPEGVAVVSRKAII 368
>gi|307704298|ref|ZP_07641216.1| conserved hypothetical protein [Streptococcus mitis SK597]
gi|307622134|gb|EFO01153.1| conserved hypothetical protein [Streptococcus mitis SK597]
Length = 368
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 121/382 (31%), Positives = 191/382 (50%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V C RC LRHY ++ DV L D DF KL+ G + ++V+ V+D DF+GS
Sbjct: 38 VYCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + VS GN V+LV K D+LP S+ P + W+ +RA E
Sbjct: 89 VIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGKISQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + + SA +K +ID + R +V+ +G N GKSTL+N+I + +
Sbjct: 132 EGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINSIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
++N++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KE+KP+TY++ ++ + GL R D + T + L LH K E
Sbjct: 238 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRTKLEG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K E+ K V+ F++ + D+ +GLGW +R+
Sbjct: 296 ASAFYDKHVGTLLTPP-NSKEKEDFPKLVQHVFNIKDKT------DLVISGLGW--IRVT 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + VW EGV +V R A++
Sbjct: 347 GTAKVAVWAPEGVAVVTRKAII 368
>gi|262282075|ref|ZP_06059844.1| GTP-binding protein YqeH [Streptococcus sp. 2_1_36FAA]
gi|262262529|gb|EEY81226.1| GTP-binding protein YqeH [Streptococcus sp. 2_1_36FAA]
Length = 368
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 191/385 (49%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVQ----LTDDDF----LRLLHEVGDSDALVVNVVDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ ++ W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKDSKVTQWLTER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LID + R +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ +K+I+ T + PGTTL ++E L + ++DTPG++H +Q+ L+
Sbjct: 187 ITG-------DKDII---TTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLS 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K V+ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
+ A +KH G L PP+G+++ EE V+ EF + + DI +GLGW +
Sbjct: 293 LQGASEFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W EGV +V R A++
Sbjct: 344 RVSGPARVAGWAPEGVAVVTRKAII 368
>gi|422871490|ref|ZP_16917983.1| GTP-binding protein [Streptococcus sanguinis SK1087]
gi|328945658|gb|EGG39809.1| GTP-binding protein [Streptococcus sanguinis SK1087]
Length = 368
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 192/385 (49%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD+ DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVQ----LTDDDF----LRLLHEVGDSDALVVNVVDSFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ ++ W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKDSKVTRWLTER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LID + R +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ +K+I+ T + PGTTL ++E L + ++DTPG++H +Q+ L+
Sbjct: 187 ITG-------DKDII---TTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLS 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
+ A +KH G L PP+G+++ EE V+ EF + + DI +GLGW +
Sbjct: 293 LQGASDFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W EGV +V R A++
Sbjct: 344 RVSGPARVAGWAPEGVAVVTRKAII 368
>gi|384044834|ref|YP_005492851.1| GTPase family protein [Bacillus megaterium WSH-002]
gi|345442525|gb|AEN87542.1| GTPase family protein [Bacillus megaterium WSH-002]
Length = 368
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 213/452 (47%), Gaps = 92/452 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q P GY P L K
Sbjct: 8 CVGCGVEIQTERPNELGY--APKSALEK-------------------------------- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ ++C RC L+HY +V+DV+ L D DF K+++ G +V+
Sbjct: 34 --------EAIICQRCFRLKHYNEVQDVS----LTDDDF-----LKILNGIGQTDGLVVK 76
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS+ + + V + +V+LV K DLLP S+ +
Sbjct: 77 VVDIFDFNGSWLPGLHRFVGNN-----------------KVLLVGNKADLLPKSIKKNKL 119
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
HW+++ A+E G+ + + +SA K G++ I + ++ + +V+ +G N GKST
Sbjct: 120 IHWMKREAKELGLKSVD-VFLMSAQKGQGIRE-IAEAIEHYREGKDVYVVGCTNVGKSTF 177
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI K V EK+I+ T + PGTTL ++ + L A L+DTPG+++ +
Sbjct: 178 INAIIKEVTG-------EKDII---TTSQYPGTTLDMIDIP--LDNGASLYDTPGIINHH 225
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ + + + KL++ KE+KP+ Y++ G +++ GL R+D + +S+ T + S
Sbjct: 226 QMAHYVDKRDLKLISPKKEIKPKVYQLNEGQTLYFGGLARLDYVQGGRKSL--TCYVSND 283
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K E A + EK G LQPP E ++ E + V EF + + DI +
Sbjct: 284 LHIHRTKLEKADELYEKQAGELLQPPRPE-QMSEFPELVAHEFTIK-----NEKTDIVFS 337
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V G + +GV + +R++L+
Sbjct: 338 GLGWVTVNESGSKVVA-HAPKGVGVFVRDSLI 368
>gi|421487827|ref|ZP_15935225.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK304]
gi|400369789|gb|EJP22786.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK304]
Length = 368
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 210/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P++
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPSK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ + A E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMEHAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D S E T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ K V+ F + + D+
Sbjct: 285 ELKLHRTKLEGASAFYDKHVGTLLTPP-NSKEKEDFPKLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|241888775|ref|ZP_04776081.1| ribosome biogenesis GTPase YqeH [Gemella haemolysans ATCC 10379]
gi|241864451|gb|EER68827.1| ribosome biogenesis GTPase YqeH [Gemella haemolysans ATCC 10379]
Length = 372
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 205/451 (45%), Gaps = 85/451 (18%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q N GY P + K +LV
Sbjct: 7 CIGCGVEIQSENQNKQGYL--PKSVVEKSIDGNLV------------------------- 39
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
C RC L++Y +V DV L DF + K +S A +++ V
Sbjct: 40 ------------CKRCFRLKNYNEVSDVQ----LGAEDFYQLI--KTLSKKDA--LIVKV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF GS+ V +V GN +VLV K+DLLP S+ + +
Sbjct: 80 VDIFDFSGSWIEDVVDIV----------------GNNKDIVLVANKLDLLPKSVKQNKVK 123
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ + + GI K+ + +SA+KN G++ + +L + +V+ +GA N GKST +
Sbjct: 124 QWLFKMLKAKGI-KVKDILLISAIKNQGVEEAASRIDELRNGK-DVYIVGATNVGKSTFI 181
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N K ++ G +KN++ T + PGTTLG++ + L ++DTPG++
Sbjct: 182 N---KLIELTTG----DKNVI---TTSHFPGTTLGMIEIP--LDRATSIYDTPGIILDYD 229
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
I L + KLV KE+K R +++ A S+ G+ RMD E +S T++AS +
Sbjct: 230 IAHYLDAQSLKLVMPKKEIKARVFQLNAEQSLFFGGMARMDFVEGERQSF--TLYASNLV 287
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K NA + EKH G L+PP E + K V+K F + DS +DI +G
Sbjct: 288 EIHRTKLGNADQLFEKHLGTLLKPPF-EDNISIFNKQVKKSFTI-----DSRKMDIVISG 341
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V + + E +++ +R +++
Sbjct: 342 LGWITVNSDSGCKIDIHVPEEIEVFVRESII 372
>gi|422883434|ref|ZP_16929883.1| GTP-binding protein [Streptococcus sanguinis SK49]
gi|332363372|gb|EGJ41157.1| GTP-binding protein [Streptococcus sanguinis SK49]
Length = 368
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 190/385 (49%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ V+D DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVQ----LTDDDF----LRLLHEVGDSDALVVNVIDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ + W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKDGKVTQWLTER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LID + R +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ +K+I+ T + PGTTL ++E L + ++DTPG++H +Q+ L+
Sbjct: 187 ITG-------DKDII---TTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLS 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K V+ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
+ A +KH G L PP+G++R EE V+ EF + + DI +GLGW +
Sbjct: 293 LQGASEFYDKHVGSLLVPPVGKER-EEFPALVKHEFTIKDKT------DIVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W EGV +V R A++
Sbjct: 344 RVSGPARVAGWVPEGVAVVTRKAII 368
>gi|422849255|ref|ZP_16895931.1| GTP-binding protein [Streptococcus sanguinis SK115]
gi|422877039|ref|ZP_16923509.1| GTP-binding protein [Streptococcus sanguinis SK1056]
gi|325690276|gb|EGD32280.1| GTP-binding protein [Streptococcus sanguinis SK115]
gi|332360512|gb|EGJ38322.1| GTP-binding protein [Streptococcus sanguinis SK1056]
Length = 368
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 191/385 (49%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVQ----LTDDDF----LRLLHEVGDSDALVVNVVDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ ++ W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKDSKVTRWLTER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LID + R +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ +K+I+ T + PGTTL ++E L + ++DTPG++H +Q+ L+
Sbjct: 187 ITG-------DKDII---TTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLS 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
+ A +KH G L PP+G+++ EE V+ EF + + DI +GLGW +
Sbjct: 293 LQGASDFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W EGV +V R A++
Sbjct: 344 RVSGPARVAGWAPEGVAVVTRKAII 368
>gi|419460561|ref|ZP_14000489.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02270]
gi|379530697|gb|EHY95936.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02270]
Length = 368
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 136/453 (30%), Positives = 209/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ + V+ F + + D+
Sbjct: 285 ELKLHRSKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|293364879|ref|ZP_06611596.1| GTP-binding protein [Streptococcus oralis ATCC 35037]
gi|307703131|ref|ZP_07640077.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
gi|291316329|gb|EFE56765.1| GTP-binding protein [Streptococcus oralis ATCC 35037]
gi|307623206|gb|EFO02197.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
Length = 368
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 210/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKTGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ ++
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSSK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D S E T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ K V+ F + + D+
Sbjct: 285 ELKLHRTKLEGASAFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|405760389|ref|YP_006700985.1| GTP-binding protein [Streptococcus pneumoniae SPNA45]
gi|404277278|emb|CCM07787.1| GTP-binding protein [Streptococcus pneumoniae SPNA45]
Length = 368
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 209/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV + N DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQLTN--DDF-------LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMKRAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ G ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPGQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ + V+ F + + D+
Sbjct: 285 ELKLHRSKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|374338656|ref|YP_005095373.1| GTP-binding protein YqeH [Streptococcus macedonicus ACA-DC 198]
gi|372284773|emb|CCF03066.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Streptococcus macedonicus ACA-DC 198]
Length = 372
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 190/384 (49%), Gaps = 52/384 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
+ C RC LRHY ++ DV + D + L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEITDVHIT--------DDEFLKLLHEVGDSDALVVNVVDIFDFNGSV 89
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + VSD V+LV K D+LP S+ ++ W+ +RA E+
Sbjct: 90 IPGLPRFVSDN-----------------DVLLVGNKKDILPKSVKDSKVTQWLTERAHEE 132
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG-NVWAIGAQNAGKSTLLNAIAKSVDA 332
GI + + SA + +K LI+ + L +RG +V+ +G N GKSTL+NAI K +
Sbjct: 133 GIRPVDVV-LTSAQNHQAIKDLIEKIEKL--RRGRDVYVVGVTNVGKSTLINAIIKEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
EK+I+ T + PGTTL ++E L + +FDTPG++H +Q+ L +
Sbjct: 190 -------EKDII---TTSRFPGTTLD--KIEIPLDDGSYIFDTPGIIHRHQMAHYLGDKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K ++ KE+KP+TY++ ++ +AGL R D + T + L LH K
Sbjct: 238 LKYISPKKEIKPKTYQLNPEQTLFLAGLGRFDFISGDKQGF--TAYFDNNLKLHRTKLAG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP +K + + K VR EF + + +D+ +GLGW ++
Sbjct: 296 ADAFYDKHVGSLLTPPT-DKELVDFPKLVRHEFTI------KAKMDVVYSGLGWIRIKAS 348
Query: 513 GEA--ALGVWTYEGVDIVLRNALL 534
++ + W EGV ++LR AL+
Sbjct: 349 QDSPVKIAAWAPEGVAVLLRKALI 372
>gi|307286839|ref|ZP_07566921.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0109]
gi|306502054|gb|EFM71340.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0109]
Length = 369
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 202/452 (44%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C G G ++Q NP GY + + FE E
Sbjct: 7 CIGWGAIIQTENPHELGYTPKTA-------------------------------FEKGME 35
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
T EV C RC LRHY ++DV L D DF +L++ G ++++
Sbjct: 36 TGEV-------YCQRCFRLRHYNDIQDVQ----LTDDDF-----LRLLNGLGTEDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + + D V+LV K+D+LP SL +
Sbjct: 80 VVDIFDFNGSLIPGLHRFIGDNP-----------------VLLVGNKVDILPKSLKKPKM 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R+RA E G+ + L S K ++ L+D + R +V+ +G N GKSTL
Sbjct: 123 VQWMRERAHEAGLRPVDVL-LTSGKKPQEMQELLDTIEKYREDR-DVYVVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I + + + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIQ----------QTVGVQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ K++ KE+KP+ Y++ A ++ + GL R D + + S + S
Sbjct: 229 QMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH KT A EKH G LQPP ++ V E + VR EF V DI A
Sbjct: 287 LNLHRTKTATADAFYEKHVGGLLQPPRADE-VAEFPELVRFEFSV------KEKTDIVFA 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V G A W +GVD++ R AL+
Sbjct: 340 GLGWITVTEPGVVA--GWAPKGVDVLRRKALI 369
>gi|116492472|ref|YP_804207.1| GTP-binding protein YqeH [Pediococcus pentosaceus ATCC 25745]
gi|116102622|gb|ABJ67765.1| Predicted GTPase [Pediococcus pentosaceus ATCC 25745]
Length = 370
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 204/452 (45%), Gaps = 91/452 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q T+ K PGY ES L+ G L
Sbjct: 9 CIGCGAILQVTDKKAPGY-------------------TPESALKKGLESGQLY------- 42
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLM 202
C RC LRHY ++ V + D DF RKL+S S + S+V+
Sbjct: 43 ------------CQRCFRLRHYNEIAPVDIS----DDDF-----RKLLSQISDSNSLVVY 81
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + + D V+LV K D+ P S+ R
Sbjct: 82 VVDMFDFNGSLIPGLHRFIGDNP-----------------VLLVGNKEDVFPKSIKRHRM 124
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+RQ+A+ +GI + + +++ KN + + V+ K +V+ +G N GKSTL
Sbjct: 125 KEWLRQQAKANGI--LPEDVVITSAKNASSVEALFNAVEKLRKGRDVYVVGVTNVGKSTL 182
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N++ A R G I +T + PGTTL R+E + L DTPG++H +
Sbjct: 183 INSLI----AIRNG------IKDVITTSRFPGTTLD--RIEIPFDDHSNLIDTPGIIHAD 230
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L E+ K V+ K +KPR +++ + ++ + L R D E S VT +
Sbjct: 231 QMAHVLAAEDLKYVSPQKTIKPRVFQLNSQQTLFVGALARFDYEHSEGS---VTAYFDNN 287
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K ENA EKH G L PP + + ++ K V +F S D S DI
Sbjct: 288 LMVHRTKLENADNFYEKHAGELLTPPTADN-LAKMPKLVAHQF-----SADQDS-DIVFE 340
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW SV + + W EG+ +V+R +L+
Sbjct: 341 GLGWISV--PEGSTITAWAPEGISVVIRRSLI 370
>gi|335040462|ref|ZP_08533590.1| ribosome biogenesis GTPase YqeH [Caldalkalibacillus thermarum
TA2.A1]
gi|334179651|gb|EGL82288.1| ribosome biogenesis GTPase YqeH [Caldalkalibacillus thermarum
TA2.A1]
Length = 365
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 209/451 (46%), Gaps = 90/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q NP PGY P L +
Sbjct: 5 CTGCGVKLQSENPGQPGYV--PVSALER-------------------------------- 30
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC ++HY + V ++N +F H + R AR++V+ +
Sbjct: 31 --------EQVICQRCFRIKHYNDLTPVPMDN----DEFIHILHR----IGEARALVVKI 74
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V N VVLVV K DL P ++ R E
Sbjct: 75 VDLFDFNGSWLPGLMRFV-----------------NFNPVVLVVNKTDLFPR-VNWVRIE 116
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
WVR++A+E G+ + + F SA K G+++L+ + + + G+V+ +GA N GKSTL+
Sbjct: 117 QWVRRQAKEGGLKPVDVV-FCSAEKGTGIQALMKSI-EQHRQGGDVYVVGATNVGKSTLI 174
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K G EK V LT + PGTTL ++++ L L+DTPG+++ +Q
Sbjct: 175 NQILKQA-------GAEKAPV--LTTSRFPGTTLDMIKIP--LDDGQALYDTPGVINDHQ 223
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + E+ K++ NK LKP+ Y++ ++ GL R+D +S + S L
Sbjct: 224 MAHYVASEDLKVILPNKPLKPKVYQLNPRQTLFFGGLARLDFASGERQSF--VCYMSNEL 281
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + KH G L PP G + ++E G + F S DI +G
Sbjct: 282 PVHRTKLEKADELYSKHLGGMLSPP-GNESLKEWGPLDQHTF-----SLKDEPCDIVFSG 335
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V+ G A L + +G + +R +++
Sbjct: 336 LGWVAVKGTG-ARLTAYAPKGAGVYVRPSMI 365
>gi|422852211|ref|ZP_16898881.1| GTP-binding protein [Streptococcus sanguinis SK150]
gi|325693537|gb|EGD35456.1| GTP-binding protein [Streptococcus sanguinis SK150]
Length = 368
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 191/385 (49%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVQ----LTDDDF----LRLLHEVGDSDALVVNVVDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR +A GN V+LV K D+LP S+ ++ W+ +R
Sbjct: 90 IPGLPRFIA-------------------GN--DVLLVGNKKDILPKSVKDSKVTQWLTER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LID + R +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ +K+I+ T + PGTTL ++E L + ++DTPG++H +Q+ L+
Sbjct: 187 ITG-------DKDII---TTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLS 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
+ A +KH G L PP+G+++ EE V+ EF + +DI +GLGW +
Sbjct: 293 LQGASGFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTI------KDKMDIVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W EGV +V R A++
Sbjct: 344 RVSGPARVAGWAPEGVAVVTRKAII 368
>gi|417934231|ref|ZP_12577551.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis bv. 2 str.
F0392]
gi|340770801|gb|EGR93316.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis bv. 2 str.
F0392]
Length = 368
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 209/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKTGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D S E T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ K V+ F + + D+
Sbjct: 285 ELKLHRTKLEGASAFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTSSAKVAVWAPEGVAVVTRKAII 368
>gi|333905648|ref|YP_004479519.1| GTP-binding protein [Streptococcus parauberis KCTC 11537]
gi|333120913|gb|AEF25847.1| GTP-binding protein [Streptococcus parauberis KCTC 11537]
gi|457096140|gb|EMG26611.1| GTP-binding protein [Streptococcus parauberis KRS-02083]
Length = 372
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 210/454 (46%), Gaps = 88/454 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG+ +Q N + GY P+ +LKKG
Sbjct: 5 ICIGCGINIQTENKEQAGY--TPT---------------------GALKKG--------L 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
ET E+ C RC LRHY ++ DV + D + L + ++V+
Sbjct: 34 ETGEL-------YCQRCFRLRHYNEITDVNIS--------DEEFLKLLHEVGDSDALVIN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS +++ VS GN V+LV K+D+LP S+ +
Sbjct: 79 VIDIFDFNGSVIPGLSRFVS---------------GN--DVLLVGNKMDILPKSVKEGKV 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + + SA N +K LI+ + L R +V+ +G N GKSTL
Sbjct: 122 TQWLTERAHEEGLRPLDVI-LTSAQNNNAIKELIEKINQLRKGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +K+I+ T + PGTTL ++E L +FDTPG++H
Sbjct: 180 INAIIQEITG-------DKDII---TTSRFPGTTLD--KIEIPLDDGTFIFDTPGIIHRY 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ LT ++ K ++ KE+KP+TY++ + ++ + GL R D + T +
Sbjct: 228 QMAHFLTAKDLKYISPKKEIKPKTYQLNSEQTLFLGGLGRFDFISGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K E A +KH G L PP G E+ K V EF +S + D+ +
Sbjct: 286 LTVHRTKLEGASEFYQKHLGLLLTPP-GPADKEDFPKLVPHEFTISDKT------DLVFS 338
Query: 503 GLGWFSVRLKGEAALGV--WTYEGVDIVLRNALL 534
GLGW + +A + + W +GV ++ R A++
Sbjct: 339 GLGWLRINGSKDAPVRIAGWAPKGVSVLTRKAII 372
>gi|270290433|ref|ZP_06196658.1| ribosome biogenesis GTPase YqeH [Pediococcus acidilactici 7_4]
gi|270281214|gb|EFA27047.1| ribosome biogenesis GTPase YqeH [Pediococcus acidilactici 7_4]
Length = 369
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 202/452 (44%), Gaps = 91/452 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q + + PGY P+ L K L+ G L
Sbjct: 8 CIGCGATLQTEDAQLPGY--TPASALKK-----------------GLESGQLY------- 41
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLM 202
C RC LRHY ++ V++ D DF RKL+S S + S+V+
Sbjct: 42 ------------CQRCFRLRHYNEIAPVSIS----DDDF-----RKLLSQISDSDSLVVY 80
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + V D V+LV K D+ P S+ R
Sbjct: 81 VVDMFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKADVFPKSIKRHRM 123
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+RQ+A+ +GI + + SA + ++ L D + L G R +V+ +G N GKSTL
Sbjct: 124 REWLRQQAKANGIEPVDVM-ITSAKQRPAVEQLFDKIEQLRGGR-DVYVVGVTNVGKSTL 181
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N++ A R G I +T + PGTTL R+E +K+ DTPG++H +
Sbjct: 182 INSLI----ALRNG------IKDVITTSRFPGTTLD--RIEIPFDDHSKMIDTPGIVHND 229
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ LT E+ K ++ K +KPR Y++ ++ L R D E S+ VT +
Sbjct: 230 QMAHVLTTEDLKYISPKKTIKPRVYQLGDEQTLFAGALARFDYENSTGS---VTAYFDNN 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K NA EKH G L PP E + L + R F + S D+
Sbjct: 287 LMIHRTKLANADHFYEKHAGELLTPPAAEN-LANLPELARHHFKIEEDS------DVVFE 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V + + W +G+ +V+R AL+
Sbjct: 340 GLGWIAV--PAGSVVTAWAPKGISVVIRRALI 369
>gi|157149789|ref|YP_001449761.1| GTP-binding protein YqeH [Streptococcus gordonii str. Challis
substr. CH1]
gi|157074583|gb|ABV09266.1| GTP-binding protein [Streptococcus gordonii str. Challis substr.
CH1]
Length = 368
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 192/385 (49%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVQ----LTDDDF----LRLLHEVGDSDALVVNVVDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ + W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKDGKVTQWLTER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LID + + + K +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKDLIDKI-EHSRKGRDVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ +K+I+ T + PGTTL ++E L + ++DTPG++H +Q+ L+
Sbjct: 187 ITG-------DKDII---TTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLS 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
E A +KH G L PP+G+++ EE V+ EF + + DI +GLGW +
Sbjct: 293 LEGASDFYDKHVGGLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W EGV +V R A++
Sbjct: 344 RVSGPARVAGWAPEGVAVVTRKAII 368
>gi|256847505|ref|ZP_05552951.1| ribosome biogenesis GTPase YqeH [Lactobacillus coleohominis
101-4-CHN]
gi|256716169|gb|EEU31144.1| ribosome biogenesis GTPase YqeH [Lactobacillus coleohominis
101-4-CHN]
Length = 375
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 141/451 (31%), Positives = 204/451 (45%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P PGY P+ + K GLV NE
Sbjct: 13 CIGCGAIIQSEDPNEPGY--TPAAAVKK----------------------GLV----NNE 44
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ C RC LRHY ++ V+ L D DF L A ++++ V
Sbjct: 45 ----------LYCQRCFRLRHYNEIAPVS----LTDDDFLQL----LNHIREANALIVYV 86
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS + + V GN P V+LV K DLLP SL T+
Sbjct: 87 VDIFDFNGSLIPGLHRFV----------------GNNP-VLLVGNKEDLLPHSLRRTKLR 129
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ+A GI I L VSA KN ++ L++ + R +V+ +G N GKSTL+
Sbjct: 130 DWIRQQANVAGIRPIDTL-LVSAKKNHQIEELLNTIEKYRQHR-DVYVVGVTNVGKSTLI 187
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K + + +T + PGTTL ++E L +L DTPG++H +Q
Sbjct: 188 NQIIK----------QRTGVKDLITTSRFPGTTLD--KIEIPLDDGQELIDTPGIIHQHQ 235
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L ++ KLV KE+KPRTY++ G +I + G+ R D + + V + L
Sbjct: 236 MAHVLPAQDLKLVAPQKEIKPRTYQLSDGQTIFMGGIARFDYLKGP--KVGVVAYFDNNL 293
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K NA T EKH G L PP + ++ R EF S D + D+ G
Sbjct: 294 QLHRTKFSNADTFYEKHLGDLLTPPTKTTK-GQIPSLERFEF-----STDEKT-DLVYEG 346
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V A+ W +GV ++ R A++
Sbjct: 347 LGWITV--PAGIAVAGWAPQGVRVLTRRAMI 375
>gi|421894614|ref|ZP_16325101.1| ribosome biogenesis GTPase YqeH [Pediococcus pentosaceus IE-3]
gi|385272529|emb|CCG90473.1| ribosome biogenesis GTPase YqeH [Pediococcus pentosaceus IE-3]
Length = 370
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 204/452 (45%), Gaps = 91/452 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q T+ K PGY ES L+ G L
Sbjct: 9 CIGCGAILQVTDKKAPGY-------------------TPESALKKGLESGQLY------- 42
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLM 202
C RC LRHY ++ V + D DF RKL+S S + S+V+
Sbjct: 43 ------------CQRCFRLRHYNEIAPVDIS----DDDF-----RKLLSQISDSNSLVVY 81
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + + D V+LV K D+ P S+ R
Sbjct: 82 VVDMFDFNGSLIPGLHRFIGDNP-----------------VLLVGNKEDVFPKSIKRHRM 124
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+RQ+A+ +GI + + +++ KN + + V+ K +V+ +G N GKSTL
Sbjct: 125 KEWLRQQAKANGI--LPEDVVITSAKNASSVEALFNAVEKLRKGRDVYVVGVTNVGKSTL 182
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N++ A R G I +T + PGTTL R+E + L DTPG++H +
Sbjct: 183 INSLI----AIRNG------IKDVITTSRFPGTTLD--RIEIPFDDHSNLIDTPGIIHAD 230
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L E+ K V+ K +KPR +++ + ++ + L R D E S VT +
Sbjct: 231 QMAHVLAAEDLKYVSPQKTIKPRVFQLNSQQTLFLGALARFDYEHSEGS---VTAYFDNN 287
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K ENA EKH G L PP + + ++ K V +F S D S DI
Sbjct: 288 LMVHRTKLENADNFYEKHAGELLTPPTADN-LAKMPKLVAHQF-----SADQDS-DIVFE 340
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW SV + + W EG+ +V+R +L+
Sbjct: 341 GLGWISV--PEGSTITAWAPEGISVVIRRSLI 370
>gi|148989411|ref|ZP_01820779.1| GTP-binding protein [Streptococcus pneumoniae SP6-BS73]
gi|147925161|gb|EDK76241.1| GTP-binding protein [Streptococcus pneumoniae SP6-BS73]
Length = 368
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 209/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV + N DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQLTN--DDF-------LKLLHEVGDSNALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RARE+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMKRAREEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ + V+ F + + D+
Sbjct: 285 ELKLHRSKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|387929813|ref|ZP_10132490.1| GTPase YqeH [Bacillus methanolicus PB1]
gi|387586631|gb|EIJ78955.1| GTPase YqeH [Bacillus methanolicus PB1]
Length = 368
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 135/456 (29%), Positives = 210/456 (46%), Gaps = 98/456 (21%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCGV +Q +P+ GY P L K
Sbjct: 7 LCIGCGVKIQTEDPQELGY--SPKSALEK------------------------------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
V+C RC L+HY +++DV L D DF K+++ G + S+++
Sbjct: 34 ---------DQVICQRCFRLKHYNEIQDVN----LTDDDF-----LKILNKIGKSDSLIV 75
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
+VD DF+GS+ + + GN +++LV K+DLLP S+ +
Sbjct: 76 KIVDIFDFNGSWLPGLHRFAG---------------GN--KILLVGNKVDLLPKSVKHNK 118
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLK---SLIDDVVDLAGKRGNVWAIGAQNAG 318
HW++Q ARE G+ K ++ VSA K +K + IDD GK +V+ +G N G
Sbjct: 119 LIHWMKQEARELGL-KPEEVFLVSAAKGHFIKKTAAAIDDY--RQGK--DVYVVGCTNVG 173
Query: 319 KSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGL 378
KST +N I K V G+G+ +T + PGTTL I+++ L L DTPG+
Sbjct: 174 KSTFINRIIKEV----SGEGDI------ITTSHFPGTTLDIIKIP--LDDDKFLMDTPGI 221
Query: 379 LHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVW 438
++ +Q+ + + + K + KE+KP+ Y++ G ++ GL R D S T +
Sbjct: 222 INHHQMAHFVDKRDLKTITPKKEIKPKVYQLNEGQTLFFGGLARFDYLTGGRRSF--TCY 279
Query: 439 ASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVD 498
S L +H K ENA + H G L PP E +++ K VR EF + D
Sbjct: 280 LSNDLLIHRTKLENASELYNNHVGEMLSPPRKE-QLDSFPKLVRHEFMIK-----EGKTD 333
Query: 499 IAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
I +GLGW +V G A + + +GV +VLR +L+
Sbjct: 334 IVFSGLGWVTVNEPG-ANVAAYVPKGVHVVLRKSLI 368
>gi|221232484|ref|YP_002511637.1| GTP-binding protein [Streptococcus pneumoniae ATCC 700669]
gi|415700216|ref|ZP_11457930.1| hypothetical protein CGSSp4595_1737 [Streptococcus pneumoniae
459-5]
gi|415750139|ref|ZP_11478083.1| hypothetical protein CGSSpSV35_1840 [Streptococcus pneumoniae SV35]
gi|415752954|ref|ZP_11479936.1| hypothetical protein CGSSpSV36_1553 [Streptococcus pneumoniae SV36]
gi|418079179|ref|ZP_12716401.1| hypothetical protein SPAR123_1626 [Streptococcus pneumoniae
4027-06]
gi|418081377|ref|ZP_12718587.1| hypothetical protein SPAR121_1674 [Streptococcus pneumoniae
6735-05]
gi|418124079|ref|ZP_12761010.1| hypothetical protein SPAR82_1748 [Streptococcus pneumoniae GA44378]
gi|418128623|ref|ZP_12765516.1| hypothetical protein SPAR144_1703 [Streptococcus pneumoniae NP170]
gi|418137820|ref|ZP_12774658.1| GTPase family protein [Streptococcus pneumoniae GA11663]
gi|418178799|ref|ZP_12815382.1| GTPase family protein [Streptococcus pneumoniae GA41565]
gi|419473808|ref|ZP_14013657.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13430]
gi|220674945|emb|CAR69522.1| GTP-binding protein [Streptococcus pneumoniae ATCC 700669]
gi|353746706|gb|EHD27366.1| hypothetical protein SPAR123_1626 [Streptococcus pneumoniae
4027-06]
gi|353752116|gb|EHD32747.1| hypothetical protein SPAR121_1674 [Streptococcus pneumoniae
6735-05]
gi|353795899|gb|EHD76245.1| hypothetical protein SPAR82_1748 [Streptococcus pneumoniae GA44378]
gi|353799122|gb|EHD79445.1| hypothetical protein SPAR144_1703 [Streptococcus pneumoniae NP170]
gi|353842858|gb|EHE22904.1| GTPase family protein [Streptococcus pneumoniae GA41565]
gi|353900775|gb|EHE76326.1| GTPase family protein [Streptococcus pneumoniae GA11663]
gi|379550972|gb|EHZ16068.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13430]
gi|381308601|gb|EIC49444.1| hypothetical protein CGSSpSV36_1553 [Streptococcus pneumoniae SV36]
gi|381314912|gb|EIC55678.1| hypothetical protein CGSSp4595_1737 [Streptococcus pneumoniae
459-5]
gi|381318433|gb|EIC59158.1| hypothetical protein CGSSpSV35_1840 [Streptococcus pneumoniae SV35]
Length = 368
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 136/453 (30%), Positives = 209/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RARE+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMKRAREEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ + V+ F + + D+
Sbjct: 285 ELKLHRSKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|293556693|ref|ZP_06675257.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1039]
gi|291601155|gb|EFF31443.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1039]
Length = 369
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 208/452 (46%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q P GY P L K GL E
Sbjct: 7 CIGCGAVIQTNKPGELGY--TPQTALEK----------------------GLASGE---- 38
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
V C RC LRHY +++DV+ L D DF +L++ G + ++++
Sbjct: 39 ----------VYCQRCFRLRHYNEIQDVS----LTDDDF-----LRLLNELGQKDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + V D V+LV K+D+LP SL T+
Sbjct: 80 VVDIFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKVDILPKSLKKTKL 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+++RA E GI + L SA K+ + L++ + + R +V+ +G N GKSTL
Sbjct: 123 TQWMKERAYEAGIRPVDVL-LTSAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K+ AG + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIKNT-AG---------VQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ +++ KE+KP+ Y++ G ++ + GL R D + S + S
Sbjct: 229 QMAHYLGKKDLRIIAPLKEIKPKVYQMNEGQTLFLGGLARFDFISGNRASF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+ +H K E A +KH G LQPP ++ VE + VR EF V DI A
Sbjct: 287 VNIHRTKLEKADEFYQKHVGGLLQPPRPDE-VEAFPELVRFEFSV------KEKTDIVFA 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V A + W +GVD++ R AL+
Sbjct: 340 GLGWITV--TAPAVIAGWAPKGVDVLKRKALI 369
>gi|289168472|ref|YP_003446741.1| hypothetical protein smi_1639 [Streptococcus mitis B6]
gi|288908039|emb|CBJ22879.1| conserved hypothetical protein [Streptococcus mitis B6]
Length = 368
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 209/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ P +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKPGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D S E T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ K V+ F + + D+
Sbjct: 285 ELKLHRTKLEGASAFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW E V +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEDVAVVTRKAII 368
>gi|293569277|ref|ZP_06680575.1| nitric-oxide synthase [Enterococcus faecium E1071]
gi|406579805|ref|ZP_11055032.1| GTPase YqeH [Enterococcus sp. GMD4E]
gi|406582233|ref|ZP_11057362.1| GTPase YqeH [Enterococcus sp. GMD3E]
gi|406584274|ref|ZP_11059308.1| GTPase YqeH [Enterococcus sp. GMD2E]
gi|406589173|ref|ZP_11063616.1| GTPase YqeH [Enterococcus sp. GMD1E]
gi|410936072|ref|ZP_11367943.1| GTPase YqeH [Enterococcus sp. GMD5E]
gi|425057709|ref|ZP_18461115.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 504]
gi|430824166|ref|ZP_19442733.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0120]
gi|430844678|ref|ZP_19462575.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1050]
gi|430867479|ref|ZP_19482473.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1574]
gi|431235846|ref|ZP_19503129.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1622]
gi|431382667|ref|ZP_19511260.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1627]
gi|431446124|ref|ZP_19513806.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1630]
gi|431523905|ref|ZP_19516930.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1634]
gi|431743338|ref|ZP_19532218.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2071]
gi|431760682|ref|ZP_19549279.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3346]
gi|447912726|ref|YP_007394138.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Enterococcus faecium NRRL B-2354]
gi|291587983|gb|EFF19833.1| nitric-oxide synthase [Enterococcus faecium E1071]
gi|403040021|gb|EJY51128.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 504]
gi|404455024|gb|EKA01896.1| GTPase YqeH [Enterococcus sp. GMD4E]
gi|404458385|gb|EKA04819.1| GTPase YqeH [Enterococcus sp. GMD3E]
gi|404464320|gb|EKA09868.1| GTPase YqeH [Enterococcus sp. GMD2E]
gi|404471251|gb|EKA15801.1| GTPase YqeH [Enterococcus sp. GMD1E]
gi|410735535|gb|EKQ77445.1| GTPase YqeH [Enterococcus sp. GMD5E]
gi|430441550|gb|ELA51647.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0120]
gi|430496109|gb|ELA72214.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1050]
gi|430550490|gb|ELA90286.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1574]
gi|430572783|gb|ELB11629.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1622]
gi|430581038|gb|ELB19485.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1627]
gi|430584863|gb|ELB23177.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1634]
gi|430585768|gb|ELB24040.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1630]
gi|430607172|gb|ELB44500.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2071]
gi|430623767|gb|ELB60445.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3346]
gi|445188435|gb|AGE30077.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Enterococcus faecium NRRL B-2354]
Length = 369
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 208/452 (46%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q P GY P L K GL E
Sbjct: 7 CIGCGAVIQTNKPGELGY--TPQTALEK----------------------GLASGE---- 38
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
V C RC LRHY +++DV+ L D DF +L++ G + ++++
Sbjct: 39 ----------VYCQRCFRLRHYNEIQDVS----LTDDDF-----LRLLNELGQKDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + V D V+LV K+D+LP SL T+
Sbjct: 80 VVDIFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKVDILPKSLKKTKL 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+++RA E GI + L SA K+ + L++ + + R +V+ +G N GKSTL
Sbjct: 123 TQWMKERAYEAGIRPVDVL-LTSAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K+ AG + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIKNT-AG---------VQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ +++ KE+KP+ Y++ G ++ + GL R D + S + S
Sbjct: 229 QMAHYLGKKDLRIIAPLKEIKPKVYQLNEGQTLFLGGLARFDFISGNRASF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+ +H K E A +KH G LQPP ++ VE + VR EF V DI A
Sbjct: 287 VNIHRTKLEKADEFYQKHVGGLLQPPRPDE-VEAFPELVRFEFSV------KEKTDIVFA 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V A + W +GVD++ R AL+
Sbjct: 340 GLGWITV--TAPAVIAGWAPKGVDVLKRKALI 369
>gi|419480588|ref|ZP_14020392.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19101]
gi|419500293|ref|ZP_14039987.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47597]
gi|379569757|gb|EHZ34724.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19101]
gi|379599601|gb|EHZ64384.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47597]
gi|429316588|emb|CCP36296.1| GTP-binding protein [Streptococcus pneumoniae SPN034156]
Length = 368
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 208/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDF-DFDHTVGRKLMSASGARSVVL 201
ET EV C RC LRHY ++ DV + N DF F H VG + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQLTN--DDFLKFLHEVGD-------SDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMKRAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ + V+ F + + D+
Sbjct: 285 ELKLHRSKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|339639756|ref|ZP_08661200.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 056
str. F0418]
gi|339453025|gb|EGP65640.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 056
str. F0418]
Length = 368
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 191/385 (49%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ V+D DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVQ----LTDDDF----LRLLHEVGDSDALVVNVIDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ ++ W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKDSKVTQWLTER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LID + R +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ +K+I+ T + PGTTL ++E L + ++DTPG++H +Q+ L+
Sbjct: 187 ITG-------DKDII---TTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLS 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K V+ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYVSPKKEIKPKTYQLHPEQTLFLGGLGRFDFVVGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
+ A +KH G L PP+G+++ EE V+ EF + + DI +GLGW +
Sbjct: 293 LQGASDFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTLKDKT------DIVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W EGV +V R A++
Sbjct: 344 RVSGPAQVAGWAPEGVAVVTRKAII 368
>gi|456370287|gb|EMF49183.1| GTP-binding protein [Streptococcus parauberis KRS-02109]
Length = 372
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 210/454 (46%), Gaps = 88/454 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG+ +Q N + GY P+ +LKKG
Sbjct: 5 ICIGCGINIQTENKEQAGY--TPT---------------------GALKKG--------L 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
ET E+ C RC LRHY ++ DV + D + L + ++V+
Sbjct: 34 ETGEL-------YCQRCFRLRHYNEITDVNIS--------DEEFLKLLHEVGDSDALVIN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS +++ VS GN V+LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSVIPGLSRFVS---------------GN--DVLLVGNKKDILPKSVKEGKV 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + + SA N +K LI+ + L R +V+ +G N GKSTL
Sbjct: 122 TQWLTERAHEEGLRPLDVI-LTSAQNNNAIKELIEKINQLRKGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +K+I+ T + PGTTL ++E L +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKDII---TTSRFPGTTLD--KIEIPLDDGTFIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ LT ++ K ++ KE+KP+TY++ + ++ + GL R D + T +
Sbjct: 228 QMAHFLTAKDLKYISPKKEIKPKTYQLNSEQTLFLGGLGRFDFISGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K E A +KH G L PP G E+ K V EF +S + D+ +
Sbjct: 286 LTVHRTKLEGASEFYQKHLGLLLTPP-GPADKEDFPKLVPHEFTISDKT------DLVFS 338
Query: 503 GLGWFSVRLKGEAALGV--WTYEGVDIVLRNALL 534
GLGW + +A + + W +GV ++ R A++
Sbjct: 339 GLGWLRINGSKDAPVRIAGWAPKGVSVLTRKAII 372
>gi|329767815|ref|ZP_08259331.1| ribosome biogenesis GTPase YqeH [Gemella haemolysans M341]
gi|328838916|gb|EGF88510.1| ribosome biogenesis GTPase YqeH [Gemella haemolysans M341]
Length = 372
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 190/381 (49%), Gaps = 46/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
+VC RC L++Y +V DV L DF + K +S A +++ VVD DF GS+
Sbjct: 38 LVCKRCFRLKNYNEVSDVQ----LGAEDFYQLI--KTLSKKDA--LIVKVVDIFDFSGSW 89
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
V +V GN +VLV K+DLLP S+ + + W+ + +
Sbjct: 90 IEDVVDIV----------------GNNKDIVLVANKLDLLPKSVKQNKVKQWLFKMLKAK 133
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
GI K+ + +SA+KN G++ + +L + +V+ +GA N GKST +N K ++
Sbjct: 134 GI-KVKDILLISAIKNQGVEEAASRIDELRNGK-DVYIVGATNVGKSTFIN---KLIELT 188
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
G +KN++ T + PGTTLG++ + L ++DTPG++ I L +
Sbjct: 189 TG----DKNVI---TTSHFPGTTLGMIEIP--LDRATSIYDTPGIILDYDIAHYLDAQSL 239
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
KLV KE+K R +++ A S+ G+ RMD E +S T++AS + +H K NA
Sbjct: 240 KLVMPKKEIKARVFQLNAEQSLFFGGMARMDFVEGERQSF--TLYASNLVEIHRTKLSNA 297
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ EKH G L+PP E + V+K F + DS +DI +GLGW +V
Sbjct: 298 DALFEKHLGTLLKPPF-EDNISIFNNQVKKSFTI-----DSRKMDIVISGLGWITVNSDS 351
Query: 514 EAALGVWTYEGVDIVLRNALL 534
+ + E +++ +R +++
Sbjct: 352 GCKIDIHVPEEIEVFVRESII 372
>gi|148269224|ref|YP_001243684.1| HSR1-like GTP-binding protein [Thermotoga petrophila RKU-1]
gi|147734768|gb|ABQ46108.1| GTP-binding protein, HSR1-related [Thermotoga petrophila RKU-1]
Length = 363
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 205/451 (45%), Gaps = 94/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
CPGCG +Q +PK PGY R + L++G
Sbjct: 3 CPGCGAAIQFEDPKKPGYIPREV-------------------YERRLEEG---------- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ ++C RC ++HYGK++ V +F+ +L S G VV+ V
Sbjct: 34 --------REILCQRCFRMKHYGKLEPV---------EFNWDFKNQLKSYLGGFDVVVWV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+G++ +A+++ +GK RV+ + K+DLLP ++ +
Sbjct: 77 IDIFDFEGTYREDIAEIL------------KGK-----RVIYAINKVDLLPRVVTVKEIK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
WV++R R + + VSA K++GL SL+ + L K +G N GKS+L+
Sbjct: 120 EWVKKRIR---VHNPDDIRIVSAEKSFGLSSLVKYLSLLTDK---ALVVGVTNVGKSSLM 173
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I +N +S P PGTTLGI+R V A L+DTPG++ ++
Sbjct: 174 NKICT-----------HENTIS-----PFPGTTLGILR-RKVREANLYLYDTPGIMTNDR 216
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
I L E QK V +EL +T++ G +I + GL R D+ + ++ +++S +
Sbjct: 217 ILDLLDSECQKRVLPREELSRKTFKPDNGRTIFMGGLCRFDIHFETEKNPIFLLFSSKEV 276
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
H K E A ++ G L PP + E KW R+ F + ++A AG
Sbjct: 277 TFHETKRERADELMRNRLGDLLIPPCSKTEFENF-KWKREIFTLKEGE------ELAVAG 329
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW SVR +G + V + V +V+R AL+
Sbjct: 330 LGWMSVR-RGPFTVEVTVPDNVKLVVREALV 359
>gi|94991776|ref|YP_599875.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS2096]
gi|417857511|ref|ZP_12502570.1| GTPase YqeH [Streptococcus pyogenes HKU QMH11M0907901]
gi|94545284|gb|ABF35331.1| GTP-binding protein [Streptococcus pyogenes MGAS2096]
gi|387934466|gb|EIK42579.1| GTPase YqeH [Streptococcus pyogenes HKU QMH11M0907901]
Length = 372
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 209/455 (45%), Gaps = 92/455 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ +Q + + G+ P+ +LKKG E
Sbjct: 6 CIGCGIQIQTEDKEKAGF--TPAA---------------------ALKKG--------ME 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ DV + D R L + ++V+ V
Sbjct: 35 TGEL-------YCQRCFRLRHYNEITDVHIT--------DDEFLRLLHEVGDSDALVVNV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+GS +++ +S GN V+LV K D+LP S+ +
Sbjct: 80 IDIFDFNGSIIPGLSRFIS---------------GN--DVLLVGNKKDILPKSVKDGKVT 122
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ +RA E+G+ + + SA + +K LI+ + +L R +V+ +G N GKSTL+
Sbjct: 123 QWLTERAHEEGLRPL-DVMLTSAQNKYAIKDLIERINELRNGR-DVYVVGVTNVGKSTLI 180
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + + + +T + PGTTL ++E L +FDTPG++H +Q
Sbjct: 181 NAIIQEITGNK----------DVITTSRFPGTTLD--KIEIPLDDGTFIFDTPGIIHRHQ 228
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ +E K+V+ KE+KP+TY++ ++ + GL R D + T + L
Sbjct: 229 MAHYLSPKELKIVSPKKEIKPKTYQLNPEQTLFLGGLSRFDFINGERQGF--TAFFDNQL 286
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A +KH G L PP +K + K VR EF + +DI +G
Sbjct: 287 ELHRTKLAGADAFYDKHVGTLLTPP-DKKELTAFPKLVRHEFTI------DQKMDIVFSG 339
Query: 504 LGWFSVRLKGE----AALGVWTYEGVDIVLRNALL 534
LGW +R+ G+ A + W EGV +++R A++
Sbjct: 340 LGW--IRVNGQKDSKAIVAAWAPEGVAVIVRKAII 372
>gi|288906055|ref|YP_003431277.1| GTP-binding protein [Streptococcus gallolyticus UCN34]
gi|306832095|ref|ZP_07465249.1| ribosome biogenesis GTPase YqeH [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325979020|ref|YP_004288736.1| GTP-binding protein engA [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|386338497|ref|YP_006034666.1| putative GTPase [Streptococcus gallolyticus subsp. gallolyticus
ATCC 43143]
gi|288732781|emb|CBI14355.1| putative conserved GTP-binding protein [Streptococcus gallolyticus
UCN34]
gi|304425534|gb|EFM28652.1| ribosome biogenesis GTPase YqeH [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325178948|emb|CBZ48992.1| GTP-binding protein engA [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|334281133|dbj|BAK28707.1| putative GTPase [Streptococcus gallolyticus subsp. gallolyticus
ATCC 43143]
Length = 372
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 191/384 (49%), Gaps = 52/384 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
+ C RC LRHY ++ DV + D + L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEITDVHIT--------DDEFLKLLHEVGDSDALVVNVVDIFDFNGSV 89
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + VS GN V+LV K D+LP S+ ++ W+ +RA E+
Sbjct: 90 IPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKDSKVTQWLTERAHEE 132
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG-NVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + + SA + +K LI+ + L +RG +V+ +G N GKSTL+NAI K +
Sbjct: 133 GLRPVDVI-LTSAQNHQAIKDLIEKIEKL--RRGRDVYVVGVTNVGKSTLINAIIKEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
EK+I+ T + PGTTL ++E L + +FDTPG++H +Q+ L +
Sbjct: 190 -------EKDII---TTSRFPGTTLD--KIEIPLDDGSYIFDTPGIIHRHQMAHYLGDKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K ++ KE+KP+TY++ ++ +AGL R D + T + L LH K
Sbjct: 238 LKYISPKKEIKPKTYQLNPEQTLFLAGLGRFDFISGDKQGF--TAYFDNNLKLHRTKLAG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP +K + + K VR EF + + +D+ +GLGW ++
Sbjct: 296 ADAFYDKHVGSLLTPPT-DKELADFPKLVRHEFTI------KAKMDVVYSGLGWIRIKAS 348
Query: 513 GEA--ALGVWTYEGVDIVLRNALL 534
++ + W EGV ++LR AL+
Sbjct: 349 QDSPVKIAAWAPEGVAVLLRKALI 372
>gi|15903636|ref|NP_359186.1| GTP-binding protein YqeH [Streptococcus pneumoniae R6]
gi|116516270|ref|YP_817012.1| GTP-binding protein YqeH [Streptococcus pneumoniae D39]
gi|418200723|ref|ZP_12837166.1| hypothetical protein SPAR109_1706 [Streptococcus pneumoniae
GA47976]
gi|421211617|ref|ZP_15668599.1| hypothetical protein AMCSP03_001638 [Streptococcus pneumoniae
2070035]
gi|421232451|ref|ZP_15689092.1| hypothetical protein AMCSP16_001610 [Streptococcus pneumoniae
2080076]
gi|421266746|ref|ZP_15717626.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR27]
gi|15459261|gb|AAL00397.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
gi|116076846|gb|ABJ54566.1| GTP-binding protein [Streptococcus pneumoniae D39]
gi|353864264|gb|EHE44182.1| hypothetical protein SPAR109_1706 [Streptococcus pneumoniae
GA47976]
gi|395572725|gb|EJG33320.1| hypothetical protein AMCSP03_001638 [Streptococcus pneumoniae
2070035]
gi|395594954|gb|EJG55189.1| hypothetical protein AMCSP16_001610 [Streptococcus pneumoniae
2080076]
gi|395866814|gb|EJG77942.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR27]
Length = 368
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 209/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA + +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMKRAHEEGLRPVDVV-LTSAQNKYAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ + V+ F + + D+
Sbjct: 285 ELKLHRSKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|329116389|ref|ZP_08245106.1| ribosome biogenesis GTPase YqeH [Streptococcus parauberis NCFD
2020]
gi|326906794|gb|EGE53708.1| ribosome biogenesis GTPase YqeH [Streptococcus parauberis NCFD
2020]
Length = 372
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 210/454 (46%), Gaps = 88/454 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG+ +Q N + GY P+ +LKKG
Sbjct: 5 ICIGCGINIQTENKEQAGY--TPT---------------------GALKKG--------L 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
ET E+ C RC LRHY ++ DV + D + L + ++V+
Sbjct: 34 ETGEL-------YCQRCFRLRHYNEITDVNIS--------DEEFLKLLHEVGDSDALVIN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS +++ VS GN V+LV K D+LP S+ +
Sbjct: 79 VIDIFDFNGSVIPGLSRFVS---------------GN--DVLLVGNKKDILPKSVKEGKV 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + + SA N +K LI+ + L R +V+ +G N GKSTL
Sbjct: 122 TQWLTERAHEEGLRPLDVI-LTSAQNNNAIKELIEKINQLRKGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + +K+I+ T + PGTTL ++E L +FDTPG++H +
Sbjct: 180 INAIIQEITG-------DKDII---TTSRFPGTTLD--KIEIPLDDGTFIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ LT ++ K ++ KE+KP+TY++ + ++ + GL R D + T +
Sbjct: 228 QMAHFLTAKDLKYISPKKEIKPKTYQLNSEQTLFLGGLGRFDFISGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K E A +KH G L PP G E+ K V EF +S + D+ +
Sbjct: 286 LMVHRTKLEGASEFYQKHLGLLLTPP-GPADKEDFPKLVPHEFTISDKT------DLVFS 338
Query: 503 GLGWFSVRLKGEAALGV--WTYEGVDIVLRNALL 534
GLGW + +A + + W +GV ++ R A++
Sbjct: 339 GLGWLRINGSKDAPVRIAGWAPKGVSVLTRKAII 372
>gi|225867895|ref|YP_002743843.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus]
gi|225701171|emb|CAW98072.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus]
Length = 372
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 191/385 (49%), Gaps = 50/385 (12%)
Query: 152 KPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDG 211
+ + C RC LRHY + DV + D R L + ++V+ V+D DF+G
Sbjct: 36 REIYCQRCFRLRHYNDITDVHIT--------DEEFLRLLHEVGDSDALVVNVIDIFDFNG 87
Query: 212 SFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAR 271
S +++ V+ GN V+LV K D+LP S+ ++ W+ +RA
Sbjct: 88 SVIPGLSRFVA---------------GN--DVLLVGNKKDILPKSVKDSKVTQWLTERAH 130
Query: 272 EDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVD 331
E+G+ + L SA + +K LI+ + L R +V+ +G N GKSTL+NAI + +
Sbjct: 131 EEGLRPLDVL-LTSAQNKYAIKELIERIDQLRQGR-DVYVVGVTNVGKSTLINAIIQEIT 188
Query: 332 AGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTRE 391
+K+++ T + PGTTL ++E L + +FDTPG++H +Q+ L+ +
Sbjct: 189 G-------DKDVI---TTSRFPGTTLD--KIEIPLDDGSFIFDTPGIIHRHQMAHYLSAK 236
Query: 392 EQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTE 451
K ++ KE+KP+TY++ ++ + GL R D S E T + L LH K E
Sbjct: 237 NLKFISPKKEIKPKTYQLNPEQTLFLGGLARFDF--ISGERQGFTAYFDNQLLLHRTKLE 294
Query: 452 NACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRL 511
A +K G+ L PP +K +++ + VR EF + VDI +GLGW V
Sbjct: 295 GADAFYDKQAGQLLTPP-DKKELDDFPRLVRHEFLL------DQKVDIVFSGLGWIRVNA 347
Query: 512 KGEAALGV--WTYEGVDIVLRNALL 534
E A V W +GV +V+R A++
Sbjct: 348 NKETATKVAAWAPDGVAVVVRKAII 372
>gi|259503609|ref|ZP_05746511.1| GTP-binding protein [Lactobacillus antri DSM 16041]
gi|259168433|gb|EEW52928.1| GTP-binding protein [Lactobacillus antri DSM 16041]
Length = 372
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 137/451 (30%), Positives = 208/451 (46%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q T+ GY P+ +++KKG EN
Sbjct: 10 CIGCGAVIQSTDSTALGY--TPA---------------------SAVKKG------LENN 40
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ C RC LRHY ++ V+ L D DF +G+ A ++++ V
Sbjct: 41 E---------LYCQRCFRLRHYNEIAPVS----LTDDDFLRLLGQ----IRDANALIVYV 83
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS + + V D V+LV K DLLP SL +
Sbjct: 84 VDIFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKEDLLPRSLRRPKLC 126
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ+A + GI + + VSA KN + L+ + R +V+ +G N GKSTL+
Sbjct: 127 DWIRQQANQAGIRPVDTV-LVSAKKNHEIDELLATIEKYRHDR-DVYVVGVTNVGKSTLI 184
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K + + +T + PGTTL +E L +L DTPG++HP+Q
Sbjct: 185 NQIIK----------QRTGVQDLITTSRFPGTTLD--EIEIPLDDGHRLVDTPGIIHPHQ 232
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ ++ K+V KE+KPRTY++ G ++ I G+ R D E+ S +VT + + L
Sbjct: 233 MAHVLSAKDLKIVAPQKEIKPRTYQLDPGQTVFIGGVARFDFEKGP-HSGFVTYFDN-NL 290
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K NA EKH G L PP ++ + VR+EF V+ S DI G
Sbjct: 291 TLHRTKLVNADRFYEKHRGGLLTPPTADE-LAAFPPLVREEFRVTEKS------DIVFEG 343
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V + + W +GV ++R A++
Sbjct: 344 LGWVTV--PADVTVAAWVPKGVAALVRKAMI 372
>gi|409387283|ref|ZP_11239523.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactococcus raffinolactis 4877]
gi|399205590|emb|CCK20438.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactococcus raffinolactis 4877]
Length = 378
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/379 (31%), Positives = 188/379 (49%), Gaps = 50/379 (13%)
Query: 156 CARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPR 215
C RC LRHY ++ V + D R L ++V+ VVD DF+GS
Sbjct: 50 CQRCFRLRHYNEIAAVNIS--------DDEFLRLLTEVGNTNALVVNVVDIFDFNGSVIP 101
Query: 216 KVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGI 275
+ + V+ GN V+LV K D+LP S+ ++ +W+R+RA E+G+
Sbjct: 102 GLHRFVA---------------GN--DVLLVGNKRDILPKSVKESKVRNWLRERAHEEGL 144
Query: 276 SKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRG 335
+ + SA L+D++ + R +V+ +G N GKSTL+NAI K+
Sbjct: 145 RPVDVV-LTSAYNRDDTLDLVDEIENYREGR-DVYVVGVTNVGKSTLINAIIKNAT---- 198
Query: 336 GDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKL 395
GD + +T + PGTTL ++E L + + DTPG++H +Q+ + E+ KL
Sbjct: 199 GDSDV------ITTSRFPGTTLD--KIEIPLDDGSFIIDTPGIIHRHQMAHFIGPEDLKL 250
Query: 396 VNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACT 455
V+ KE+KP+TY++ G ++ + GL R D + + T + +L +H K E A
Sbjct: 251 VSPKKEIKPKTYQLNEGQTLFMGGLARFDYLKGDKQGF--TGFFDNHLMIHRTKLEKADE 308
Query: 456 MVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEA 515
KH G L PP E + K VRKEF + G S DI +GLGW +R+ A
Sbjct: 309 FYVKHKGSLLVPP-READMATFPKLVRKEFTIKGKS------DIVFSGLGW--IRVAKPA 359
Query: 516 ALGVWTYEGVDIVLRNALL 534
+ W EGVD+V+R +L+
Sbjct: 360 IIAAWVPEGVDVVIRKSLI 378
>gi|427395311|ref|ZP_18888233.1| ribosome biogenesis GTPase YqeH [Enterococcus durans FB129-CNAB-4]
gi|430862527|ref|ZP_19479844.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1573]
gi|430963077|ref|ZP_19487369.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1576]
gi|431010994|ref|ZP_19489738.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1578]
gi|431263923|ref|ZP_19505811.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1623]
gi|425723811|gb|EKU86697.1| ribosome biogenesis GTPase YqeH [Enterococcus durans FB129-CNAB-4]
gi|430549105|gb|ELA88952.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1573]
gi|430555502|gb|ELA95039.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1576]
gi|430560016|gb|ELA99322.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1578]
gi|430576359|gb|ELB15010.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1623]
Length = 369
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 208/452 (46%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q P GY P L K GL E
Sbjct: 7 CIGCGAVIQTNKPGELGY--TPQTALEK----------------------GLASGE---- 38
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
V C RC LRHY +++DV+ L D DF +L++ G + ++++
Sbjct: 39 ----------VYCQRCFRLRHYNEIQDVS----LTDDDF-----LRLLNELGQKDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + V D V+LV K+D+LP SL T+
Sbjct: 80 VVDIFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKVDILPKSLKKTKL 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+++RA E GI + L SA K+ + L++ + + R +V+ +G N GKSTL
Sbjct: 123 TQWMKERAYEAGIRPVDVL-LTSAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K+ AG + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIKNT-AG---------VQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ +++ KE+KP+ Y++ G ++ + GL R D + S + S
Sbjct: 229 QMAHYLGKKDLRIIAPLKEIKPKVYQLNEGQTLFLGGLARFDFISGNRASF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+ +H K E A +KH G LQPP ++ VE + VR +F V DI A
Sbjct: 287 VNIHRTKLEKADEFYQKHVGGLLQPPRPDE-VEAFPELVRFDFSV------KEKTDIVFA 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V A + W +GVD++ R AL+
Sbjct: 340 GLGWITV--TAPAVIAGWAPKGVDVLKRKALI 369
>gi|225859501|ref|YP_002741011.1| GTP-binding protein YqeH [Streptococcus pneumoniae 70585]
gi|225722019|gb|ACO17873.1| GTP-binding protein [Streptococcus pneumoniae 70585]
Length = 368
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 208/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY K+ DV + N DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNKITDVQLTN--DDF-------LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMKRAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ + V+ F + + D+
Sbjct: 285 ELKLHRSKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|69245736|ref|ZP_00603602.1| GTP-binding protein, HSR1-related [Enterococcus faecium DO]
gi|257880239|ref|ZP_05659892.1| GTP-binding protein YqeH [Enterococcus faecium 1,230,933]
gi|257885285|ref|ZP_05664938.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,501]
gi|257891377|ref|ZP_05671030.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,410]
gi|257893626|ref|ZP_05673279.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,408]
gi|260560463|ref|ZP_05832637.1| GTP-binding protein YqeH [Enterococcus faecium C68]
gi|261208980|ref|ZP_05923385.1| GTP-binding protein YqeH [Enterococcus faecium TC 6]
gi|289565208|ref|ZP_06445660.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium D344SRF]
gi|293563281|ref|ZP_06677731.1| nitric-oxide synthase [Enterococcus faecium E1162]
gi|294619096|ref|ZP_06698591.1| nitric-oxide synthase [Enterococcus faecium E1679]
gi|314939219|ref|ZP_07846473.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133a04]
gi|314942037|ref|ZP_07848895.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133C]
gi|314948390|ref|ZP_07851779.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0082]
gi|314951244|ref|ZP_07854299.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133A]
gi|314991667|ref|ZP_07857137.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133B]
gi|314996793|ref|ZP_07861806.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133a01]
gi|383328631|ref|YP_005354515.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium Aus0004]
gi|389868163|ref|YP_006375586.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium DO]
gi|415896213|ref|ZP_11550763.1| nitric-oxide synthase [Enterococcus faecium E4453]
gi|416138301|ref|ZP_11599017.1| nitric-oxide synthase [Enterococcus faecium E4452]
gi|424793013|ref|ZP_18219180.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium V689]
gi|424901319|ref|ZP_18324838.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R497]
gi|424953629|ref|ZP_18368580.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R494]
gi|424963303|ref|ZP_18377537.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1190]
gi|424970373|ref|ZP_18383892.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1139]
gi|424974410|ref|ZP_18387642.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1137]
gi|424979477|ref|ZP_18392326.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1123]
gi|424982654|ref|ZP_18395295.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV99]
gi|424991594|ref|ZP_18403734.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV26]
gi|425007563|ref|ZP_18418686.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV1]
gi|425014430|ref|ZP_18425105.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E417]
gi|425019732|ref|ZP_18430073.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C497]
gi|425022790|ref|ZP_18432945.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C1904]
gi|425034138|ref|ZP_18439049.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 514]
gi|425040464|ref|ZP_18444932.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 513]
gi|425043017|ref|ZP_18447289.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 511]
gi|425044850|ref|ZP_18448978.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 510]
gi|425052567|ref|ZP_18456167.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 506]
gi|425059881|ref|ZP_18463197.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 503]
gi|430831715|ref|ZP_19449764.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0333]
gi|430848438|ref|ZP_19466255.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1133]
gi|430850943|ref|ZP_19468699.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1185]
gi|430853384|ref|ZP_19471112.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1258]
gi|430857116|ref|ZP_19474787.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1392]
gi|431301203|ref|ZP_19507522.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1626]
gi|431538220|ref|ZP_19517570.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1731]
gi|431679745|ref|ZP_19524501.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1904]
gi|431749190|ref|ZP_19537934.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2297]
gi|431754258|ref|ZP_19542922.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2883]
gi|431769159|ref|ZP_19557585.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1321]
gi|431770242|ref|ZP_19558645.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1644]
gi|431773801|ref|ZP_19562117.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2369]
gi|431779479|ref|ZP_19567674.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E4389]
gi|68195629|gb|EAN10069.1| GTP-binding protein, HSR1-related [Enterococcus faecium DO]
gi|257814467|gb|EEV43225.1| GTP-binding protein YqeH [Enterococcus faecium 1,230,933]
gi|257821137|gb|EEV48271.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,501]
gi|257827737|gb|EEV54363.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,410]
gi|257830005|gb|EEV56612.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,408]
gi|260073465|gb|EEW61793.1| GTP-binding protein YqeH [Enterococcus faecium C68]
gi|260077019|gb|EEW64741.1| GTP-binding protein YqeH [Enterococcus faecium TC 6]
gi|289163029|gb|EFD10877.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium D344SRF]
gi|291594757|gb|EFF26139.1| nitric-oxide synthase [Enterococcus faecium E1679]
gi|291604733|gb|EFF34217.1| nitric-oxide synthase [Enterococcus faecium E1162]
gi|313589088|gb|EFR67933.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133a01]
gi|313593758|gb|EFR72603.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133B]
gi|313596596|gb|EFR75441.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133A]
gi|313599163|gb|EFR78008.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133C]
gi|313641470|gb|EFS06050.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133a04]
gi|313645182|gb|EFS09762.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0082]
gi|364091097|gb|EHM33601.1| nitric-oxide synthase [Enterococcus faecium E4452]
gi|364091181|gb|EHM33679.1| nitric-oxide synthase [Enterococcus faecium E4453]
gi|378938325|gb|AFC63397.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium Aus0004]
gi|388533412|gb|AFK58604.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium DO]
gi|402916877|gb|EJX37709.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium V689]
gi|402930713|gb|EJX50343.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R497]
gi|402938628|gb|EJX57616.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R494]
gi|402949758|gb|EJX67797.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1190]
gi|402956415|gb|EJX73877.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1137]
gi|402957907|gb|EJX75265.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1123]
gi|402960308|gb|EJX77464.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV99]
gi|402962021|gb|EJX79003.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1139]
gi|402976381|gb|EJX92277.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV26]
gi|402994712|gb|EJY09225.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV1]
gi|402998680|gb|EJY12924.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E417]
gi|403010909|gb|EJY24250.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C497]
gi|403011880|gb|EJY25159.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C1904]
gi|403012771|gb|EJY25951.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 513]
gi|403021277|gb|EJY33745.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 514]
gi|403021500|gb|EJY33956.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 511]
gi|403028500|gb|EJY40320.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 510]
gi|403033853|gb|EJY45337.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 506]
gi|403043186|gb|EJY54110.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 503]
gi|430481096|gb|ELA58261.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0333]
gi|430534700|gb|ELA75135.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1185]
gi|430534881|gb|ELA75313.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1133]
gi|430540465|gb|ELA80667.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1258]
gi|430542841|gb|ELA82934.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1392]
gi|430580393|gb|ELB18860.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1626]
gi|430594762|gb|ELB32725.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1731]
gi|430598810|gb|ELB36538.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1904]
gi|430611952|gb|ELB49019.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2297]
gi|430619865|gb|ELB56677.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2883]
gi|430627934|gb|ELB64398.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1321]
gi|430635135|gb|ELB71233.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2369]
gi|430635995|gb|ELB72074.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1644]
gi|430642334|gb|ELB78115.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E4389]
Length = 369
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 207/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q P GY P L K GL E
Sbjct: 7 CIGCGAVIQTNKPGELGY--TPQTALEK----------------------GLASGE---- 38
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
V C RC LRHY +++DV+ L D DF +L++ G + ++++
Sbjct: 39 ----------VYCQRCFRLRHYNEIQDVS----LTDDDF-----LRLLNELGQKDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + V D V+LV K+D+LP SL T+
Sbjct: 80 VVDIFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKVDILPKSLKKTKL 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+++RA E GI + L SA K+ + L++ + + R +V+ +G N GKSTL
Sbjct: 123 TQWMKERAYEAGIRPVDVL-LTSAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K+ AG + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIKNT-AG---------VQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ +++ KE+KP+ Y++ G ++ + GL R D + S + S
Sbjct: 229 QMAHYLGKKDLRIIAPLKEIKPKVYQLNEGQTLFLGGLARFDFISGNRASF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+ +H K E A +KH G LQPP ++ VE + VR EF V DI A
Sbjct: 287 VNIHRTKLEKADEFYQKHVGGLLQPPRPDE-VEAFPELVRFEFSV------KEKTDIVFA 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V + W +GVD++ R AL+
Sbjct: 340 GLGWITV--TAPVVIAGWAPKGVDVLKRKALI 369
>gi|15674473|ref|NP_268647.1| GTP-binding protein YqeH [Streptococcus pyogenes SF370]
gi|21909760|ref|NP_664028.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS315]
gi|28896548|ref|NP_802898.1| GTP-binding protein YqeH [Streptococcus pyogenes SSI-1]
gi|71910075|ref|YP_281625.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS5005]
gi|386362126|ref|YP_006071457.1| hypothetical protein SPYALAB49_000294 [Streptococcus pyogenes
Alab49]
gi|410679949|ref|YP_006932351.1| ribosome biogenesis GTPase YqeH [Streptococcus pyogenes A20]
gi|421891703|ref|ZP_16322471.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Streptococcus pyogenes NS88.2]
gi|13621572|gb|AAK33368.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
gi|21903945|gb|AAM78831.1| putative GTP-binding protein [Streptococcus pyogenes MGAS315]
gi|28811802|dbj|BAC64731.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
gi|71852857|gb|AAZ50880.1| GTP-binding protein [Streptococcus pyogenes MGAS5005]
gi|350276535|gb|AEQ23903.1| hypothetical protein SPYALAB49_000294 [Streptococcus pyogenes
Alab49]
gi|379982527|emb|CCG26193.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Streptococcus pyogenes NS88.2]
gi|395453320|dbj|BAM29659.1| GTP-binding protein [Streptococcus pyogenes M1 476]
gi|409692538|gb|AFV37398.1| ribosome biogenesis GTPase YqeH [Streptococcus pyogenes A20]
Length = 372
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 208/455 (45%), Gaps = 92/455 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ +Q + + G+ P+ +LKKG E
Sbjct: 6 CIGCGIQIQTEDKEKAGF--TPAA---------------------ALKKG--------ME 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ DV + D R L + ++V+ V
Sbjct: 35 TGEL-------YCQRCFRLRHYNEITDVHIT--------DDEFLRLLHEVGDSDALVVNV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+GS +++ +S GN V+LV K D+LP S+ +
Sbjct: 80 IDIFDFNGSIIPGLSRFIS---------------GN--DVLLVGNKKDILPKSVKDGKVT 122
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ +RA E+G+ + + SA + +K LI + +L R +V+ +G N GKSTL+
Sbjct: 123 QWLTERAHEEGLRPL-DVMLTSAQNKYAIKDLIGRINELRNGR-DVYVVGVTNVGKSTLI 180
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + + + +T + PGTTL ++E L +FDTPG++H +Q
Sbjct: 181 NAIIQEITGNK----------DVITTSRFPGTTLD--KIEIPLDDGTFIFDTPGIIHRHQ 228
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ +E K+V+ KE+KP+TY++ ++ + GL R D + T + L
Sbjct: 229 MAHYLSPKELKIVSPKKEIKPKTYQLNPEQTLFLGGLARFDFINGERQGF--TAFFDNQL 286
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A +KH G L PP +K + K VR EF + +DI +G
Sbjct: 287 ELHRTKLAGADAFYDKHVGTLLTPP-DKKELTAFPKLVRHEFTI------DQKMDIVFSG 339
Query: 504 LGWFSVRLKGE----AALGVWTYEGVDIVLRNALL 534
LGW +R+ G+ A + W EGV +++R A++
Sbjct: 340 LGW--IRVNGQKDSKAIVAAWAPEGVAVIVRKAII 372
>gi|209558820|ref|YP_002285292.1| GTP-binding protein YqeH [Streptococcus pyogenes NZ131]
gi|209540021|gb|ACI60597.1| GTP-binding protein [Streptococcus pyogenes NZ131]
Length = 373
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 207/455 (45%), Gaps = 91/455 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ +Q + + G+ P+ +LKKG E
Sbjct: 6 CIGCGIHIQTEDKEKAGF--TPAA---------------------ALKKG--------ME 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ DV + D R L + ++V+ V
Sbjct: 35 TGEL-------YCQRCFRLRHYNEITDVHIT--------DDEFLRLLHEVGDSDALVVNV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+GS +++ +S GN V+LV K D+LP S+ +
Sbjct: 80 IDIFDFNGSIIPGLSRFIS---------------GN--DVLLVGNKKDILPKSVKDGKVT 122
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ +RA E+G + + SA + +K LI + +L R +V+ +G N GKSTL+
Sbjct: 123 QWLTERAHEEGRLRPLDVMLTSAQNKYAIKDLIGRINELRNGR-DVYVVGVTNVGKSTLI 181
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + + + +T + PGTTL ++E L +FDTPG++H +Q
Sbjct: 182 NAIIQEITGNK----------DVITTSRFPGTTLD--KIEIPLDDGTFIFDTPGIIHRHQ 229
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ +E K+V+ KE+KP+TY++ ++ + GL R D + T + L
Sbjct: 230 MAHYLSPKELKIVSPKKEIKPKTYQLNPEQTLFLGGLSRFDFINGERQGF--TAFFDNQL 287
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A +KH G L PP +K + K VR EF + +DI +G
Sbjct: 288 ELHRTKLAGADAFYDKHVGTLLTPP-DKKELTAFPKLVRHEFTI------DQKMDIVFSG 340
Query: 504 LGWFSVRLKGE----AALGVWTYEGVDIVLRNALL 534
LGW +R+ G+ A + W EGV +++R A++
Sbjct: 341 LGW--IRVNGQKDSKAIVAAWAPEGVAVIVRKAII 373
>gi|225861571|ref|YP_002743080.1| GTP-binding protein YqeH [Streptococcus pneumoniae Taiwan19F-14]
gi|298230643|ref|ZP_06964324.1| GTP-binding protein YqeH [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298254887|ref|ZP_06978473.1| GTP-binding protein YqeH [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298503494|ref|YP_003725434.1| GTP-binding protein [Streptococcus pneumoniae TCH8431/19A]
gi|387788790|ref|YP_006253858.1| GTP-binding protein YqeH [Streptococcus pneumoniae ST556]
gi|417313225|ref|ZP_12099937.1| GTPase family protein [Streptococcus pneumoniae GA04375]
gi|417696913|ref|ZP_12346091.1| GTPase family protein [Streptococcus pneumoniae GA47368]
gi|418083554|ref|ZP_12720751.1| hypothetical protein SPAR81_1644 [Streptococcus pneumoniae GA44288]
gi|418085738|ref|ZP_12722917.1| hypothetical protein SPAR90_1643 [Streptococcus pneumoniae GA47281]
gi|418092354|ref|ZP_12729494.1| hypothetical protein SPAR84_1728 [Streptococcus pneumoniae GA44452]
gi|418094540|ref|ZP_12731667.1| hypothetical protein SPAR110_1668 [Streptococcus pneumoniae
GA49138]
gi|418101207|ref|ZP_12738290.1| hypothetical protein SPAR128_1626 [Streptococcus pneumoniae
7286-06]
gi|418110719|ref|ZP_12747738.1| hypothetical protein SPAR113_1792 [Streptococcus pneumoniae
GA49447]
gi|418119198|ref|ZP_12756155.1| hypothetical protein SPAR54_1239 [Streptococcus pneumoniae GA18523]
gi|418142264|ref|ZP_12779076.1| GTPase family protein [Streptococcus pneumoniae GA13455]
gi|418151253|ref|ZP_12787999.1| GTPase family protein [Streptococcus pneumoniae GA14798]
gi|418153491|ref|ZP_12790229.1| GTPase family protein [Streptococcus pneumoniae GA16121]
gi|418169850|ref|ZP_12806491.1| GTPase family protein [Streptococcus pneumoniae GA19077]
gi|418171883|ref|ZP_12808507.1| GTPase family protein [Streptococcus pneumoniae GA19451]
gi|418196404|ref|ZP_12832880.1| GTPase family protein [Streptococcus pneumoniae GA47688]
gi|418198573|ref|ZP_12835031.1| GTPase family protein [Streptococcus pneumoniae GA47778]
gi|418221782|ref|ZP_12848435.1| hypothetical protein SPAR104_1715 [Streptococcus pneumoniae
GA47751]
gi|418223946|ref|ZP_12850586.1| hypothetical protein SPAR127_1647 [Streptococcus pneumoniae
5185-06]
gi|419423654|ref|ZP_13963867.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA43264]
gi|419425687|ref|ZP_13965883.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 7533-05]
gi|419427799|ref|ZP_13967980.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 5652-06]
gi|419429945|ref|ZP_13970109.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA11856]
gi|419436543|ref|ZP_13976630.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 8190-05]
gi|419438785|ref|ZP_13978853.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13499]
gi|419445250|ref|ZP_13985265.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19923]
gi|419447406|ref|ZP_13987411.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 7879-04]
gi|419449531|ref|ZP_13989527.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 4075-00]
gi|419450874|ref|ZP_13990860.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP02]
gi|419489279|ref|ZP_14029028.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA44386]
gi|419502399|ref|ZP_14042083.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47628]
gi|419519457|ref|ZP_14059063.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA08825]
gi|419528086|ref|ZP_14067629.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17719]
gi|421273405|ref|ZP_15724245.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR55]
gi|421288015|ref|ZP_15738778.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58771]
gi|225726735|gb|ACO22586.1| GTP-binding protein [Streptococcus pneumoniae Taiwan19F-14]
gi|298239089|gb|ADI70220.1| GTP-binding protein [Streptococcus pneumoniae TCH8431/19A]
gi|327389933|gb|EGE88278.1| GTPase family protein [Streptococcus pneumoniae GA04375]
gi|332200311|gb|EGJ14384.1| GTPase family protein [Streptococcus pneumoniae GA47368]
gi|353754774|gb|EHD35386.1| hypothetical protein SPAR81_1644 [Streptococcus pneumoniae GA44288]
gi|353756447|gb|EHD37048.1| hypothetical protein SPAR90_1643 [Streptococcus pneumoniae GA47281]
gi|353763054|gb|EHD43611.1| hypothetical protein SPAR84_1728 [Streptococcus pneumoniae GA44452]
gi|353765036|gb|EHD45584.1| hypothetical protein SPAR110_1668 [Streptococcus pneumoniae
GA49138]
gi|353770707|gb|EHD51219.1| hypothetical protein SPAR128_1626 [Streptococcus pneumoniae
7286-06]
gi|353781340|gb|EHD61785.1| hypothetical protein SPAR113_1792 [Streptococcus pneumoniae
GA49447]
gi|353791150|gb|EHD71531.1| hypothetical protein SPAR54_1239 [Streptococcus pneumoniae GA18523]
gi|353804497|gb|EHD84778.1| GTPase family protein [Streptococcus pneumoniae GA13455]
gi|353814463|gb|EHD94689.1| GTPase family protein [Streptococcus pneumoniae GA14798]
gi|353817042|gb|EHD97250.1| GTPase family protein [Streptococcus pneumoniae GA16121]
gi|353833829|gb|EHE13937.1| GTPase family protein [Streptococcus pneumoniae GA19077]
gi|353835620|gb|EHE15714.1| GTPase family protein [Streptococcus pneumoniae GA19451]
gi|353860415|gb|EHE40360.1| GTPase family protein [Streptococcus pneumoniae GA47688]
gi|353861683|gb|EHE41618.1| GTPase family protein [Streptococcus pneumoniae GA47778]
gi|353875092|gb|EHE54946.1| hypothetical protein SPAR104_1715 [Streptococcus pneumoniae
GA47751]
gi|353878744|gb|EHE58574.1| hypothetical protein SPAR127_1647 [Streptococcus pneumoniae
5185-06]
gi|379138532|gb|AFC95323.1| GTP-binding protein YqeH [Streptococcus pneumoniae ST556]
gi|379537192|gb|EHZ02377.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13499]
gi|379550123|gb|EHZ15225.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA11856]
gi|379566239|gb|EHZ31230.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17719]
gi|379572943|gb|EHZ37900.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19923]
gi|379586226|gb|EHZ51080.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA43264]
gi|379586821|gb|EHZ51671.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA44386]
gi|379600612|gb|EHZ65393.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47628]
gi|379612982|gb|EHZ77697.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 8190-05]
gi|379614946|gb|EHZ79656.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 7879-04]
gi|379617992|gb|EHZ82672.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 5652-06]
gi|379619148|gb|EHZ83822.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 7533-05]
gi|379622149|gb|EHZ86785.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 4075-00]
gi|379622579|gb|EHZ87213.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP02]
gi|379641294|gb|EIA05832.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA08825]
gi|395873836|gb|EJG84926.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR55]
gi|395886578|gb|EJG97594.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58771]
Length = 368
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 209/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV + N DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQLTN--DDF-------LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMKRAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ + V+ F + + D+
Sbjct: 285 ELKLHRSKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V+R A++
Sbjct: 338 SGLGW--IRVTGIAKVAVWAPEGVAVVIRKAII 368
>gi|414564751|ref|YP_006043712.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus ATCC
35246]
gi|338847816|gb|AEJ26028.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus ATCC
35246]
Length = 372
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 191/385 (49%), Gaps = 50/385 (12%)
Query: 152 KPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDG 211
+ + C RC LRHY + DV + D R L + ++V+ V+D DF+G
Sbjct: 36 REIYCQRCFRLRHYNDITDVHIT--------DEEFLRLLHEVGDSDALVVNVIDIFDFNG 87
Query: 212 SFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAR 271
S +++ V+ GN V+LV K D+LP S+ ++ W+ +RA
Sbjct: 88 SVIPGLSRFVA---------------GN--DVLLVGNKKDILPKSVKDSKVTQWLTERAH 130
Query: 272 EDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVD 331
E+G+ + L SA + +K LI+ + L R +V+ +G N GKSTL+NAI + +
Sbjct: 131 EEGLRPLDVL-LTSAQNKYAIKELIERIDQLRQGR-DVYVVGVTNVGKSTLINAIIQEIT 188
Query: 332 AGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTRE 391
+K+++ T + PGTTL ++E L + +FDTPG++H +Q+ L+ +
Sbjct: 189 G-------DKDVI---TTSRFPGTTLD--KIEIPLDDGSFIFDTPGIIHRHQMAHYLSAK 236
Query: 392 EQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTE 451
K ++ KE+KP+TY++ ++ + GL R D S E T + L LH K E
Sbjct: 237 NLKFISPKKEIKPKTYQLNPEQTLFLGGLARFDF--ISGERQGFTAYFDNQLLLHRTKLE 294
Query: 452 NACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRL 511
A +K G+ L PP +K +++ + VR EF + VD+ +GLGW V
Sbjct: 295 GADAFYDKQAGQLLTPP-DKKELDDFPRLVRHEFLL------DQKVDVVFSGLGWIRVNA 347
Query: 512 KGEAALGV--WTYEGVDIVLRNALL 534
E A V W +GV +V+R A++
Sbjct: 348 NKETATKVAAWAPDGVAVVVRKAII 372
>gi|227550575|ref|ZP_03980624.1| GTP-binding protein [Enterococcus faecium TX1330]
gi|257888600|ref|ZP_05668253.1| GTP-binding protein YqeH [Enterococcus faecium 1,141,733]
gi|257897022|ref|ZP_05676675.1| GTP-binding protein YqeH [Enterococcus faecium Com12]
gi|257898963|ref|ZP_05678616.1| GTP-binding protein YqeH [Enterococcus faecium Com15]
gi|293378715|ref|ZP_06624873.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium PC4.1]
gi|424763232|ref|ZP_18190711.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX1337RF]
gi|425055202|ref|ZP_18458687.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 505]
gi|431030888|ref|ZP_19490597.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1590]
gi|431595404|ref|ZP_19522164.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1861]
gi|431751398|ref|ZP_19540088.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2620]
gi|431758519|ref|ZP_19547146.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3083]
gi|431763994|ref|ZP_19552541.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3548]
gi|227180283|gb|EEI61255.1| GTP-binding protein [Enterococcus faecium TX1330]
gi|257824654|gb|EEV51586.1| GTP-binding protein YqeH [Enterococcus faecium 1,141,733]
gi|257833587|gb|EEV60008.1| GTP-binding protein YqeH [Enterococcus faecium Com12]
gi|257836875|gb|EEV61949.1| GTP-binding protein YqeH [Enterococcus faecium Com15]
gi|292642643|gb|EFF60795.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium PC4.1]
gi|402423043|gb|EJV55263.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX1337RF]
gi|403034406|gb|EJY45858.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 505]
gi|430565063|gb|ELB04233.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1590]
gi|430590638|gb|ELB28694.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1861]
gi|430615514|gb|ELB52463.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2620]
gi|430617577|gb|ELB54450.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3083]
gi|430621450|gb|ELB58212.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3548]
Length = 369
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 208/452 (46%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q + P GY P L K GL E
Sbjct: 7 CIGCGAVIQTSKPGELGY--TPQTALEK----------------------GLASGE---- 38
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
V C RC LRHY +++DV+ L D DF +L++ G + ++++
Sbjct: 39 ----------VYCQRCFRLRHYNEIQDVS----LTDDDF-----LRLLNELGQKDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + V D V+LV K+D+LP SL +
Sbjct: 80 VVDIFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKVDILPKSLKKPKL 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+++RA E GI + L SA K+ + L++ + + R +V+ +G N GKSTL
Sbjct: 123 TQWMKERAHEAGIRPVDVL-LTSAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K+ AG + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIKNT-AG---------VQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ +++ KE+KP+ Y++ G ++ + GL R D + S + S
Sbjct: 229 QMAHYLGKKDLRIIAPLKEIKPKVYQLNEGQTLFLGGLARFDFISGNRASF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+ +H K E A +KH G LQPP ++ VE + VR EF V DI A
Sbjct: 287 VNIHRTKLEKADEFYQKHVGGLLQPPRPDE-VEAFPELVRFEFSV------KEKTDIVFA 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V A + W +GVD++ R AL+
Sbjct: 340 GLGWITV--TAPAVIAGWAPKGVDVLKRKALI 369
>gi|374603054|ref|ZP_09676039.1| nitric-oxide synthase [Paenibacillus dendritiformis C454]
gi|374391367|gb|EHQ62704.1| nitric-oxide synthase [Paenibacillus dendritiformis C454]
Length = 372
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 208/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
VC GCGV +Q + GY P+ LN+
Sbjct: 9 VCSGCGVTVQTGHADQIGYV--PASALNR------------------------------- 35
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
P++C RC ++HY + V ++ DF +GR ++V+
Sbjct: 36 ---------SPLICQRCFRIKHYNEAASVALDQ----DDFLRLLGR----IGQEDALVIH 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
+VD DFDGS + + V GN P V+LVV KIDLLP S + R
Sbjct: 79 IVDLFDFDGSVISGLQRFV----------------GNNP-VLLVVNKIDLLPRSTNWNRL 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG-NVWAIGAQNAGKST 321
+WV+++A+E G+ +I + VSA +N G + L++ + +RG +V+ +GA N GKST
Sbjct: 122 TNWVQRQAKEHGL-RILDVILVSAKRNAGFERLVEQMSHW--RRGRDVYVVGATNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+N + + ++ LT + PGTTL +V + L + DTPG+++
Sbjct: 179 LINRLIH----------DYSDMDRELTTSRYPGTTLDVVHIP--LDDGKHIIDTPGIVYT 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+++T +R++ + +K LKP Y++ G ++ R D E +S T + S
Sbjct: 227 SRLTELASRQDLGALLPDKPLKPAVYQLNEGQTMFFGAFARFDFVEGERQSF--TCYISN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
LP+H K E A + E+H G L PP R+++L W + ++ ++ S DI
Sbjct: 285 GLPIHRTKLERADALYEEHRGELLAPPT-RDRLDDLPGWTKHQYRIA----TGSETDIFI 339
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW K A + + +GV ++ R A++
Sbjct: 340 SGLGWIKCNGKEGALVEIHAPKGVKVLTRRAMI 372
>gi|225871191|ref|YP_002747138.1| GTP-binding protein YqeH [Streptococcus equi subsp. equi 4047]
gi|225700595|emb|CAW95118.1| GTP-binding protein [Streptococcus equi subsp. equi 4047]
Length = 372
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 191/385 (49%), Gaps = 50/385 (12%)
Query: 152 KPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDG 211
+ + C RC LRHY + DV + D R L + ++V+ V+D DF+G
Sbjct: 36 REIYCQRCFRLRHYNDITDVHIT--------DEEFLRLLHEVGDSDALVVNVIDIFDFNG 87
Query: 212 SFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAR 271
S +++ V+ GN V+LV K D+LP S+ ++ W+ +RA
Sbjct: 88 SVIPGLSRFVA---------------GN--DVLLVGNKKDILPKSVKDSKVTQWLTERAH 130
Query: 272 EDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVD 331
E+G+ + L SA + +K LI+ + L R +V+ +G N GKSTL+NAI + +
Sbjct: 131 EEGLRPLDVL-LTSAQNKYAIKELIERIDQLRQGR-DVYVVGVTNVGKSTLINAIIQEIT 188
Query: 332 AGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTRE 391
+K+++ T + PGTTL ++E L + +FDTPG++H +Q+ L+ +
Sbjct: 189 G-------DKDVI---TTSRFPGTTLD--KIEIPLDDGSFIFDTPGIIHRHQMAHYLSAK 236
Query: 392 EQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTE 451
K ++ KE+KP+TY++ ++ + GL R D S E T + L LH K E
Sbjct: 237 NLKFISPKKEIKPKTYQLNPEQTLFLGGLARFDF--ISGERQGFTAYFDNQLLLHRTKLE 294
Query: 452 NACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRL 511
A +K G+ L PP +K +++ + VR EF + VD+ +GLGW V
Sbjct: 295 GADAFYDKQAGQLLTPP-DKKELDDFPRLVRHEFLL------DQKVDVVFSGLGWIRVNA 347
Query: 512 KGEAALGV--WTYEGVDIVLRNALL 534
E A V W +GV +V+R A++
Sbjct: 348 NKETATKVAAWAPDGVAVVVRKAII 372
>gi|417694623|ref|ZP_12343810.1| GTPase family protein [Streptococcus pneumoniae GA47901]
gi|332201172|gb|EGJ15243.1| GTPase family protein [Streptococcus pneumoniae GA47901]
Length = 368
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 189/382 (49%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V C RC LRHY ++ DV + N DF KL+ G + ++V+ V+D DF+GS
Sbjct: 38 VYCQRCFRLRHYNEITDVQLTN--DDF-------LKLLHEVGDSNALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + VS GN V+LV K D+LP S+ + W+ +RA E
Sbjct: 89 VIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGKISQWLMKRAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + + SA +K +ID + R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
++N++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KE+KP+TY++ ++ + GL R D + T + L LH K E
Sbjct: 238 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRSKLEG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K E+ + V+ F + + D+ +GLGW +R+
Sbjct: 296 ASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVISGLGW--IRVT 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + VW EGV +V R A++
Sbjct: 347 GTAKVAVWAPEGVAVVTRKAII 368
>gi|94987891|ref|YP_595992.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS9429]
gi|94541399|gb|ABF31448.1| GTP-binding protein [Streptococcus pyogenes MGAS9429]
Length = 372
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 208/455 (45%), Gaps = 92/455 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ +Q + + G+ P+ +LKKG E
Sbjct: 6 CIGCGIQIQTEDKEKAGF--TPAA---------------------ALKKG--------ME 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ DV + D R L + ++V+ V
Sbjct: 35 TGEL-------YCQRCFRLRHYNEITDVHIT--------DDEFLRLLHEVGDSDALVVNV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+GS +++ +S GN V+LV K D+LP S+ +
Sbjct: 80 IDIFDFNGSIIPGLSRFIS---------------GN--DVLLVGNKKDILPKSVKDGKVT 122
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ +RA E+G+ + + SA + +K LI+ + +L R +V+ +G N GKSTL+
Sbjct: 123 QWLTERAHEEGLRPL-DVMLTSAQNKYAIKDLIERINELRNGR-DVYVVGVTNVGKSTLI 180
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + + + +T + PGTTL ++E L +FDTPG++H +Q
Sbjct: 181 NAIIQEITGNK----------DVITTSRFPGTTLD--KIEIPLDDGTFIFDTPGIIHRHQ 228
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ +E K+V+ KE+KP+TY++ ++ + GL R D + T L
Sbjct: 229 MAHYLSPKELKIVSPKKEIKPKTYQLNPEQTLFLGGLSRFDFINGERQGF--TALFDNQL 286
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A +KH G L PP +K + K VR EF + +DI +G
Sbjct: 287 ELHRTKLAGADAFYDKHVGTLLTPP-DKKELTAFPKLVRHEFTI------DQKMDIVFSG 339
Query: 504 LGWFSVRLKGE----AALGVWTYEGVDIVLRNALL 534
LGW +R+ G+ A + W EGV +++R A++
Sbjct: 340 LGW--IRVNGQKDSKAIVAAWAPEGVAVIVRKAII 372
>gi|421268909|ref|ZP_15719778.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR95]
gi|421307943|ref|ZP_15758585.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60132]
gi|395869163|gb|EJG80279.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR95]
gi|395907328|gb|EJH18222.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60132]
Length = 368
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 208/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV + N DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQLTN--DDF-------LKLLHEVGDSNALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMKRAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ + V+ F + + D+
Sbjct: 285 ELKLHRSKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|418165043|ref|ZP_12801711.1| GTPase family protein [Streptococcus pneumoniae GA17371]
gi|353828875|gb|EHE09011.1| GTPase family protein [Streptococcus pneumoniae GA17371]
Length = 336
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 190/382 (49%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V C RC LRHY ++ DV + N DF KL+ G + ++V+ V+D DF+GS
Sbjct: 6 VYCQRCFRLRHYNEITDVQLTN--DDF-------LKLLHEVGDSDALVVNVIDIFDFNGS 56
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + VS GN V+LV K D+LP S+ + W+ +RA E
Sbjct: 57 VIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGKISQWLMKRAHE 99
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + + SA +K +ID + R +V+ +G N GKSTL+NAI + +
Sbjct: 100 EGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITG 157
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
++N++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 158 -------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 205
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KE+KP+TY++ ++ + GL R D + T + L LH K E
Sbjct: 206 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRSKLEG 263
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K E+ + V+ F + + D+ +GLGW +R+
Sbjct: 264 ASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVISGLGW--IRVT 314
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + VW EGV +V+R A++
Sbjct: 315 GIAKVAVWAPEGVAVVIRKAII 336
>gi|168486390|ref|ZP_02710898.1| GTP-binding protein [Streptococcus pneumoniae CDC1087-00]
gi|418185507|ref|ZP_12822047.1| GTPase family protein [Streptococcus pneumoniae GA47283]
gi|419511011|ref|ZP_14050652.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae NP141]
gi|419530906|ref|ZP_14070432.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40028]
gi|421215847|ref|ZP_15672768.1| hypothetical protein AMCSP04_001566 [Streptococcus pneumoniae
2070109]
gi|183570601|gb|EDT91129.1| GTP-binding protein [Streptococcus pneumoniae CDC1087-00]
gi|353848237|gb|EHE28253.1| GTPase family protein [Streptococcus pneumoniae GA47283]
gi|379571315|gb|EHZ36273.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40028]
gi|379631614|gb|EHZ96191.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae NP141]
gi|395580054|gb|EJG40549.1| hypothetical protein AMCSP04_001566 [Streptococcus pneumoniae
2070109]
Length = 368
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 209/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV + N DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQLTN--DDF-------LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + + K +V+ +G N GKST
Sbjct: 121 ISQWLMKRAHEEGLRPVDVV-LTSAQNKHAIKEVIDKI-EYYRKGRDVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ + V+ F + + D+
Sbjct: 285 ELKLHRSKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|313890885|ref|ZP_07824509.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudoporcinus SPIN
20026]
gi|416852866|ref|ZP_11910011.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudoporcinus LQ
940-04]
gi|313120783|gb|EFR43898.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudoporcinus SPIN
20026]
gi|356740355|gb|EHI65587.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudoporcinus LQ
940-04]
Length = 371
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 137/455 (30%), Positives = 210/455 (46%), Gaps = 93/455 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q N + G+ P + K GL E
Sbjct: 6 CIGCGVKIQTENKEEIGF--TPQAAVTK----------------------GL-------E 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
T E+ C RC LRHY ++ DV + D DF KL+ G + ++V+
Sbjct: 35 TGEL-------YCQRCFRLRHYNEISDVQ----MSDDDF-----LKLLHEVGESDALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS +++ V+ GN V+LV K D+LP S ++
Sbjct: 79 VVDIFDFNGSVIPGLSRFVA---------------GN--DVLLVGNKKDILPKSTKDSKV 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG-NVWAIGAQNAGKST 321
W+ +RA E+G+ I + SA N+ +K LI + L +RG +V+ +G N GKST
Sbjct: 122 NQWLLERAHEEGLRPIDVM-LTSAQNNYAIKDLIASIDKL--RRGRDVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + KNI+ T + PGTTL ++E L +FDTPG++H
Sbjct: 179 LINAIIQEISG-------NKNII---TTSRFPGTTLD--KIEIPLEDGTYIFDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ L+ + K ++ KE+KP+TY++ G ++ +AGL R D + T +
Sbjct: 227 HQMAHYLSAKNLKYISPKKEIKPKTYQLNPGQTLFLAGLGRFDFISGLKQGF--TAYFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A KH G L PP E R + + + EF + S +D+
Sbjct: 285 NLTLHRTKLEGADAFYHKHRGSLLTPPDNENR--DFPELISYEFFI------DSKMDLVF 336
Query: 502 AGLGWFSVRLKGEAALGV--WTYEGVDIVLRNALL 534
+GLGW + E + + W +GV +V R A++
Sbjct: 337 SGLGWICINGSKENPVKIAGWAPKGVAVVTRKAII 371
>gi|419443162|ref|ZP_13983188.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13224]
gi|379550627|gb|EHZ15724.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13224]
Length = 368
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 208/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMKRAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ + V+ F + + D+
Sbjct: 285 ELKLHRSKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|357636021|ref|ZP_09133896.1| ribosome biogenesis GTPase YqeH [Streptococcus macacae NCTC 11558]
gi|357584475|gb|EHJ51678.1| ribosome biogenesis GTPase YqeH [Streptococcus macacae NCTC 11558]
Length = 368
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 200/451 (44%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T P GY P L K L+ G L
Sbjct: 6 CIGCGACLQTTAPDQAGY--TPKSALEK-----------------GLESGELY------- 39
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
C RC LRHY + DV L D DF + L + ++V+ V
Sbjct: 40 ------------CQRCFRLRHYNDIMDVH----LSDDDF----LKILHEVGDSNALVVNV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS + + +S GN ++LV K D+LP S+ ++
Sbjct: 80 VDIFDFNGSVIPGLQRFIS---------------GN--DLLLVGNKSDILPRSVKTSKVR 122
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ +RA E+G+ + + SA +K LI + R +V+ +G N GKSTL+
Sbjct: 123 QWLTERAHEEGLHPLDVM-LTSAQNKQAIKDLIAAIETFRQGR-DVYVVGVTNVGKSTLI 180
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NA+ + + +K+++ T + PGTTL ++E L + +FDTPG++H +Q
Sbjct: 181 NAMIQELTG-------DKDVI---TASRFPGTTLD--KIEIPLDDGSYIFDTPGIIHRHQ 228
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ ++ K +N KELKP+TY++ A ++ + GL R D E + T + L
Sbjct: 229 MAHYLSAKDLKYINPKKELKPKTYQLNAEQTLFLGGLARFDFIEGERQGF--TAYFDNNL 286
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A +KH G L PP +K V + VR E + D+ +G
Sbjct: 287 KLHRTKLAFADAFYDKHVGSLLTPP-DKKEVAAFPQLVRHELRI------EEKTDLVFSG 339
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW KG A L W +GV +V R AL+
Sbjct: 340 LGWICA--KGPARLAAWAPKGVAVVTRKALI 368
>gi|304384686|ref|ZP_07367032.1| ribosome biogenesis GTPase YqeH [Pediococcus acidilactici DSM
20284]
gi|304328880|gb|EFL96100.1| ribosome biogenesis GTPase YqeH [Pediococcus acidilactici DSM
20284]
Length = 369
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 201/452 (44%), Gaps = 91/452 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q + + PGY P+ L K L+ G L
Sbjct: 8 CIGCGATLQTEDAQLPGY--TPASALKK-----------------GLESGQLY------- 41
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLM 202
C RC LRHY ++ V++ D DF RKL+S S + S+V+
Sbjct: 42 ------------CQRCFRLRHYNEIAPVSIS----DDDF-----RKLLSQISDSDSLVVY 80
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + V D V+LV K D+ P S+ R
Sbjct: 81 VVDMFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKADVFPKSIKRHRM 123
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+RQ+A+ +GI + + SA + ++ L D + L R +V+ +G N GKSTL
Sbjct: 124 REWLRQQAKANGIEPVDVM-ITSAKQRPAVEQLFDKIEQLRDGR-DVYVVGVTNVGKSTL 181
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N++ A R G I +T + PGTTL R+E +K+ DTPG++H +
Sbjct: 182 INSLI----ALRNG------IKDVITTSRFPGTTLD--RIEIPFDDHSKMIDTPGIVHND 229
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ LT E+ K ++ K +KPR Y++ ++ L R D E S+ VT +
Sbjct: 230 QMAHVLTAEDLKYISPKKTIKPRVYQLGDEQTLFAGALARFDYENSTGS---VTAYFDNN 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K NA EKH G L PP E + L + R F + S D+
Sbjct: 287 LMIHRTKLANADHFYEKHAGELLTPPAAEN-LANLPELARHHFKIEEDS------DVVFE 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V + + W +G+ +V+R AL+
Sbjct: 340 GLGWIAV--PAGSVVTAWAPKGISVVIRRALI 369
>gi|148544461|ref|YP_001271831.1| GTP-binding protein YqeH [Lactobacillus reuteri DSM 20016]
gi|184153826|ref|YP_001842167.1| GTP-binding protein YqeH [Lactobacillus reuteri JCM 1112]
gi|227363111|ref|ZP_03847246.1| GTP-binding protein YqeH [Lactobacillus reuteri MM2-3]
gi|325682783|ref|ZP_08162299.1| GTP-binding protein [Lactobacillus reuteri MM4-1A]
gi|148531495|gb|ABQ83494.1| Nitric-oxide synthase [Lactobacillus reuteri DSM 20016]
gi|183225170|dbj|BAG25687.1| GTPase [Lactobacillus reuteri JCM 1112]
gi|227071829|gb|EEI10117.1| GTP-binding protein YqeH [Lactobacillus reuteri MM2-3]
gi|324977133|gb|EGC14084.1| GTP-binding protein [Lactobacillus reuteri MM4-1A]
Length = 375
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 134/451 (29%), Positives = 201/451 (44%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY + ++L+KG E
Sbjct: 13 CIGCGSIIQTEDPNGLGYTPK-----------------------SALEKG--------KE 41
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ V+ L D DF R L A ++++ V
Sbjct: 42 TGEL-------YCQRCFRLRHYNEIAPVS----LTDDDF----LRLLNQIRDANALIVYV 86
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS + + V D V+LV K DLLP SL +
Sbjct: 87 VDVFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKEDLLPRSLRRPKLT 129
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ+A G+ I + VSA KN + L+D V++ +V+ +G N GKSTL+
Sbjct: 130 DWIRQQANIAGLRPIDTV-LVSAKKNHQIDHLLD-VIEKYRHNRDVYVVGVTNVGKSTLI 187
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K + + +T + PGTTL ++E L L DTPG++H Q
Sbjct: 188 NQIIK----------QRTGVKELITTSRFPGTTLD--KIEIPLDDGHVLVDTPGIIHQEQ 235
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ ++ K+V KE+KP+TY++ G ++ + G+ R D E + + L
Sbjct: 236 MAHVLSPKDLKIVAPQKEIKPKTYQLNDGQTLFLGGVARFDYLHG--ERAGMVAYFDNNL 293
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K NA KH G L PP +++ E R EFH++ S DI G
Sbjct: 294 PIHRTKLNNADNFYAKHLGDLLTPPTSDEK-NEFPPLERYEFHITEKS------DIVFEG 346
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V K A W +GV ++R A++
Sbjct: 347 LGWITVPAKTTVA--AWVPKGVGALVRRAMI 375
>gi|157693068|ref|YP_001487530.1| GTP-binding protein YqeH [Bacillus pumilus SAFR-032]
gi|157681826|gb|ABV62970.1| GTP-binding protein [Bacillus pumilus SAFR-032]
Length = 366
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 198/381 (51%), Gaps = 48/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L++Y +++DV+ L + DF + L S S+++ VVD DF+GS+
Sbjct: 34 VICQRCFRLKNYNEIQDVS----LTEDDFLNI----LHSIGETDSLIVKVVDIFDFNGSW 85
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
++++V G P ++LV K+D+LP S+ R HW+++ A+E+
Sbjct: 86 INGLSRIV----------------GGNP-ILLVGNKVDILPKSVKKDRLVHWMKREAKEN 128
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G++ I + +SA + G+ +++ +D + NV+ +G N GKST +N I K V
Sbjct: 129 GLNPIA-VFLISASRGQGVPEVME-AIDHYREGRNVYVVGCTNVGKSTFINRIIKEVSG- 185
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
E+N++ T + PGTTL + + L + LFDTPG+++ +Q+ +++ +
Sbjct: 186 ------EENVI---TTSQYPGTTLDAIEIP--LDDGSALFDTPGIINRHQMAHYVSKNDL 234
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
K++ KELKPRT+++ +++ GL R D + S + L +H K ENA
Sbjct: 235 KILTPKKELKPRTFQLNEAQTLYFGGLARFDYVKGGRTSF--VCYMPNELNIHRTKLENA 292
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ EKH G L PP E +E+ V F ++D +DI +GLGW + G
Sbjct: 293 DDLYEKHAGELLSPPSKEG-MEDFPPLVPHTF-----TFDQPKMDIVFSGLGWITANDAG 346
Query: 514 EAALGVWTYEGVDIVLRNALL 534
+ + V+ +GV + +R +L+
Sbjct: 347 K-QIKVYAPKGVHVFMRRSLI 366
>gi|149002055|ref|ZP_01827009.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS69]
gi|147759864|gb|EDK66854.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS69]
Length = 336
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 189/382 (49%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V C RC LRHY ++ DV + N DF KL+ G + ++V+ V+D DF+GS
Sbjct: 6 VYCQRCFRLRHYNEITDVQLTN--DDF-------LKLLHEVGDSDALVVNVIDIFDFNGS 56
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + VS GN V+LV K D+LP S+ + W+ +RA E
Sbjct: 57 VIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGKISQWLMKRAHE 99
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + + SA +K +ID + R +V+ +G N GKSTL+NAI + +
Sbjct: 100 EGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITG 157
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
++N++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 158 -------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 205
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KE+KP+TY++ ++ + GL R D + T + L LH K E
Sbjct: 206 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRSKLEG 263
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K E+ + V+ F + + D+ +GLGW +R+
Sbjct: 264 ASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVISGLGW--IRVT 314
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + VW EGV +V R A++
Sbjct: 315 GTAKVAVWAPEGVAVVTRKAII 336
>gi|334137654|ref|ZP_08511083.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. HGF7]
gi|333604818|gb|EGL16203.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. HGF7]
Length = 371
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 210/452 (46%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q +P GY P+Q L K
Sbjct: 9 CGGCGVKLQLEDPHALGY--TPAQALEK-------------------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
+PV+C RC +++Y + +T+ DF KL+ G + ++V+
Sbjct: 35 --------EPVICQRCFRIKNYNEASSITLNQ--DDF-------LKLLGHVGHKEALVIN 77
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
+VD DF+GS +A+ V G P ++LVV KIDLLP + R
Sbjct: 78 IVDIFDFEGSLISGLARFV----------------GGNP-IILVVNKIDLLPKVTNWNRI 120
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+WVR++A+E G+ K+ ++ SA KN G ++ VD +V+ +GA N GKSTL
Sbjct: 121 VNWVRKQAKEQGL-KVVEVVLCSAKKNMGFDRVL-QAVDEHRNGKDVYVVGATNVGKSTL 178
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N + + ++ S LT + PGTTL +V + L + DTPG+++ +
Sbjct: 179 INRLIS----------DYSDLDSELTTSQYPGTTLDMVEIP--LDDGHFIIDTPGIVYKH 226
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
++T +++++ + K LKP Y++ G ++ L R D +S T+++S
Sbjct: 227 RLTELVSKKDLGKLMPGKPLKPMVYQLNEGQTLFFGSLARFDFVRGERQSF--TIYSSGA 284
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+P+H K E A + H G L PP+ K +EEL V++ H+S +D+ +
Sbjct: 285 IPIHRTKLEKADELYANHKGTLLTPPV-VKDLEELPPLVKQTIHIS----KGKKLDVLIS 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW + + A L V +GV IV R++L+
Sbjct: 340 GLGWIKINSEAGAELAVHVPKGVKIVQRDSLI 371
>gi|418146990|ref|ZP_12783768.1| GTPase family protein [Streptococcus pneumoniae GA13637]
gi|353812565|gb|EHD92800.1| GTPase family protein [Streptococcus pneumoniae GA13637]
Length = 368
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 208/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV + N DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQLTN--DDF-------LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMRRAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ + V+ F + + D+
Sbjct: 285 ELKLHRSKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|289434771|ref|YP_003464643.1| GTPase [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|289171015|emb|CBH27557.1| GTPase, putative [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 366
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 134/451 (29%), Positives = 208/451 (46%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY P +LN NE
Sbjct: 7 CIGCGAIIQTEDPDKIGY--APKSSLN-----------NEQ------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L+HY +++DV L D DF R L S +++++ V
Sbjct: 35 ----------VICKRCFRLKHYNEIQDVA----LTDDDF----LRILNQISTKQALIVYV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS+ + + +GN P V+LV K D+LP SL +
Sbjct: 77 VDIFDFDGSWLPGLPRF----------------AGNNP-VLLVGNKEDVLPKSLKRDKLT 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R RA+E G+S T + VSA + G +L++ + +L + +V+ +G N GKSTL+
Sbjct: 120 RWMRTRAKEQGLSA-TDVVLVSAERGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K E N++ T + PGTTL ++E L L DTPG+++ +Q
Sbjct: 178 NRIIKQASG-------ENNVI---TTSQFPGTTLD--KIEIPLADGNVLVDTPGIINHHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + + K + KE+KP +++ ++ + L R+D +S+ V+ S L
Sbjct: 226 MAHFIDTDTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + EK G LQPP E+ ++ L K V F+V DI +G
Sbjct: 284 PIHRTKLEKADALYEKQAGFVLQPPT-EEGMKTLPKLVPYTFNV------KEKADIVFSG 336
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW ++ +G A + W EGV +R +L+
Sbjct: 337 LGWVTIP-EGGAKVTAWVPEGVSATIRTSLV 366
>gi|148984192|ref|ZP_01817487.1| GTP-binding protein [Streptococcus pneumoniae SP3-BS71]
gi|149006583|ref|ZP_01830282.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74]
gi|169833423|ref|YP_001695124.1| GTP-binding protein YqeH [Streptococcus pneumoniae Hungary19A-6]
gi|182684693|ref|YP_001836440.1| GTP-binding protein YqeH [Streptococcus pneumoniae CGSP14]
gi|237649161|ref|ZP_04523413.1| GTP-binding protein YqeH [Streptococcus pneumoniae CCRI 1974]
gi|237820723|ref|ZP_04596568.1| GTP-binding protein YqeH [Streptococcus pneumoniae CCRI 1974M2]
gi|387757963|ref|YP_006064942.1| GTP-binding protein [Streptococcus pneumoniae OXC141]
gi|417677481|ref|ZP_12326888.1| GTPase family protein [Streptococcus pneumoniae GA17545]
gi|418113094|ref|ZP_12750094.1| hypothetical protein SPAR72_1797 [Streptococcus pneumoniae GA41538]
gi|418144919|ref|ZP_12781713.1| GTPase family protein [Streptococcus pneumoniae GA13494]
gi|418155739|ref|ZP_12792466.1| GTPase family protein [Streptococcus pneumoniae GA16242]
gi|418226137|ref|ZP_12852765.1| hypothetical protein SPAR141_1670 [Streptococcus pneumoniae NP112]
gi|418232747|ref|ZP_12859333.1| hypothetical protein SPAR13_1657 [Streptococcus pneumoniae GA07228]
gi|418237202|ref|ZP_12863768.1| hypothetical protein SPAR59_1756 [Streptococcus pneumoniae GA19690]
gi|419458338|ref|ZP_13998280.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02254]
gi|419467366|ref|ZP_14007247.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05248]
gi|419495933|ref|ZP_14035650.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47461]
gi|419513145|ref|ZP_14052777.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05578]
gi|419517352|ref|ZP_14056968.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02506]
gi|421234637|ref|ZP_15691255.1| putative GTP-binding protein [Streptococcus pneumoniae 2061617]
gi|421249979|ref|ZP_15706436.1| GTP-binding protein [Streptococcus pneumoniae 2082239]
gi|421283892|ref|ZP_15734678.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04216]
gi|421299211|ref|ZP_15749898.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60080]
gi|421302784|ref|ZP_15753448.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17484]
gi|147761881|gb|EDK68844.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74]
gi|147923481|gb|EDK74594.1| GTP-binding protein [Streptococcus pneumoniae SP3-BS71]
gi|168995925|gb|ACA36537.1| GTP-binding protein [Streptococcus pneumoniae Hungary19A-6]
gi|182630027|gb|ACB90975.1| GTP-binding protein [Streptococcus pneumoniae CGSP14]
gi|301800552|emb|CBW33192.1| GTP-binding protein [Streptococcus pneumoniae OXC141]
gi|332072922|gb|EGI83403.1| GTPase family protein [Streptococcus pneumoniae GA17545]
gi|353783456|gb|EHD63885.1| hypothetical protein SPAR72_1797 [Streptococcus pneumoniae GA41538]
gi|353805212|gb|EHD85487.1| GTPase family protein [Streptococcus pneumoniae GA13494]
gi|353819988|gb|EHE00177.1| GTPase family protein [Streptococcus pneumoniae GA16242]
gi|353881334|gb|EHE61148.1| hypothetical protein SPAR141_1670 [Streptococcus pneumoniae NP112]
gi|353886060|gb|EHE65844.1| hypothetical protein SPAR13_1657 [Streptococcus pneumoniae GA07228]
gi|353891640|gb|EHE71394.1| hypothetical protein SPAR59_1756 [Streptococcus pneumoniae GA19690]
gi|379530002|gb|EHY95243.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02254]
gi|379543113|gb|EHZ08265.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05248]
gi|379594019|gb|EHZ58830.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47461]
gi|379634310|gb|EHZ98875.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05578]
gi|379639425|gb|EIA03969.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02506]
gi|395600491|gb|EJG60648.1| putative GTP-binding protein [Streptococcus pneumoniae 2061617]
gi|395613673|gb|EJG73701.1| GTP-binding protein [Streptococcus pneumoniae 2082239]
gi|395880578|gb|EJG91630.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04216]
gi|395900682|gb|EJH11620.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60080]
gi|395901406|gb|EJH12342.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17484]
gi|429319928|emb|CCP33247.1| GTP-binding protein [Streptococcus pneumoniae SPN034183]
gi|429321745|emb|CCP35221.1| GTP-binding protein [Streptococcus pneumoniae SPN994039]
gi|429323565|emb|CCP31262.1| GTP-binding protein [Streptococcus pneumoniae SPN994038]
Length = 368
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 208/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV + N DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQLTN--DDF-------LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMKRAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ + V+ F + + D+
Sbjct: 285 ELKLHRSKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|385260249|ref|ZP_10038398.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. SK140]
gi|385192169|gb|EIF39579.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. SK140]
Length = 368
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 189/382 (49%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V C RC LRHY ++ DV L D DF KL+ G + ++V+ V+D DF+GS
Sbjct: 38 VYCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + VS GN V+LV K D+LP S+ + W+ +RA E
Sbjct: 89 VIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKQGKISQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + + SA ++ +ID + R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPVDVV-LTSAQNKHAIREVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
++N++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KE+KP+TY++ ++ + GL R D + T + L LH K E
Sbjct: 238 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRTKLEG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K E+ K V+ F + + D+ +GLGW +R+
Sbjct: 296 ASAFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFTIKDKT------DLVISGLGW--IRVT 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + VW EGV +V R A++
Sbjct: 347 GTAKVAVWAPEGVAVVTRKAII 368
>gi|423335620|ref|ZP_17313395.1| GTPase [Lactobacillus reuteri ATCC 53608]
gi|337728850|emb|CCC03969.1| GTPase [Lactobacillus reuteri ATCC 53608]
Length = 375
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 134/451 (29%), Positives = 201/451 (44%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY + ++L+KG E
Sbjct: 13 CIGCGSIIQTEDPNGLGYTPK-----------------------SALEKG--------KE 41
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ V+ L D DF R L A ++++ V
Sbjct: 42 TGEL-------YCQRCFRLRHYNEIAPVS----LTDDDF----LRLLNQIRDANALIVYV 86
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS + + V D V+LV K DLLP SL +
Sbjct: 87 VDVFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKEDLLPRSLRRPKLT 129
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ+A G+ I + VSA KN + L+D V++ +V+ +G N GKSTL+
Sbjct: 130 DWIRQQANIAGLRPIDTV-LVSAKKNHQIDHLLD-VIEKYRHNRDVYVVGVTNVGKSTLI 187
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K + + +T + PGTTL ++E L L DTPG++H Q
Sbjct: 188 NQIIK----------QRTGVKELITTSRFPGTTLD--KIEIPLDDGHVLVDTPGIIHQEQ 235
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ ++ K+V KE+KP+TY++ G ++ + G+ R D E + + L
Sbjct: 236 MAHVLSPKDLKIVAPQKEIKPKTYQLNDGQTLFLGGVARFDYLHG--ERAGMVAYFDNNL 293
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K NA KH G L PP +++ E R EFH++ S DI G
Sbjct: 294 PIHRTKLSNADNFYAKHLGDLLTPPTSDEK-NEFPPLERYEFHITEKS------DIVFEG 346
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V K A W +GV ++R A++
Sbjct: 347 LGWITVPAKTTVA--AWVPKGVGALVRRAMI 375
>gi|223932251|ref|ZP_03624255.1| Nitric-oxide synthase [Streptococcus suis 89/1591]
gi|223899232|gb|EEF65589.1| Nitric-oxide synthase [Streptococcus suis 89/1591]
Length = 368
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 195/382 (51%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
+ C RC LRHY ++ DV + D DF KL+ + G + ++V+ V+D DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVNIS----DDDF-----LKLLHSVGESDALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + +S GN V+LV K D+LP S+ + W+ +RA E
Sbjct: 89 VIPGLPRFIS---------------GN--DVLLVGNKQDILPKSVKTGKVTQWLTERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + + SA +K LI+ + + K +V+ +G N GKSTL+NAI + +
Sbjct: 132 IGMRPVDVV-LTSAQNKQAIKDLIEKI-EQHRKGRDVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
+K+++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DKDVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K ++ KE+KP+TY++ ++ +AGL R D + T + L LH K +
Sbjct: 238 LKYISPRKEIKPKTYQLNPEQTLFLAGLGRFDFVAGERQGF--TAFFDNELQLHRTKLQG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PPI K ++E + VR EF + + D+ +GLGW +R+
Sbjct: 296 ASEFYQKHAGSLLVPPI-SKELKEFPELVRHEFTI------NEKTDVVFSGLGW--IRVN 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
+A + W +GVD+V+R A++
Sbjct: 347 EKAKIAAWAPKGVDVVIRKAII 368
>gi|168493658|ref|ZP_02717801.1| GTP-binding protein [Streptococcus pneumoniae CDC3059-06]
gi|418074577|ref|ZP_12711828.1| GTPase family protein [Streptococcus pneumoniae GA11184]
gi|418076966|ref|ZP_12714199.1| hypothetical protein SPAR98_1893 [Streptococcus pneumoniae GA47502]
gi|418090106|ref|ZP_12727260.1| hypothetical protein SPAR77_1696 [Streptococcus pneumoniae GA43265]
gi|418099071|ref|ZP_12736168.1| hypothetical protein SPAR122_1653 [Streptococcus pneumoniae
6901-05]
gi|418105855|ref|ZP_12742911.1| hypothetical protein SPAR85_1783 [Streptococcus pneumoniae GA44500]
gi|418115265|ref|ZP_12752251.1| hypothetical protein SPAR125_1666 [Streptococcus pneumoniae
5787-06]
gi|418117423|ref|ZP_12754392.1| hypothetical protein SPAR124_1638 [Streptococcus pneumoniae
6963-05]
gi|418134603|ref|ZP_12771460.1| hypothetical protein SPAR23_0873 [Streptococcus pneumoniae GA11426]
gi|418174140|ref|ZP_12810752.1| GTPase family protein [Streptococcus pneumoniae GA41277]
gi|418217193|ref|ZP_12843873.1| GTPase family protein [Streptococcus pneumoniae Netherlands15B-37]
gi|419432124|ref|ZP_13972257.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP05]
gi|419434026|ref|ZP_13974144.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40183]
gi|419440933|ref|ZP_13980978.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40410]
gi|419465062|ref|ZP_14004953.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04175]
gi|419469549|ref|ZP_14009417.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA06083]
gi|419498116|ref|ZP_14037823.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47522]
gi|419535212|ref|ZP_14074711.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17457]
gi|421281736|ref|ZP_15732533.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04672]
gi|421310151|ref|ZP_15760776.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA62681]
gi|183576456|gb|EDT96984.1| GTP-binding protein [Streptococcus pneumoniae CDC3059-06]
gi|353747106|gb|EHD27764.1| hypothetical protein SPAR98_1893 [Streptococcus pneumoniae GA47502]
gi|353747178|gb|EHD27835.1| GTPase family protein [Streptococcus pneumoniae GA11184]
gi|353761297|gb|EHD41869.1| hypothetical protein SPAR77_1696 [Streptococcus pneumoniae GA43265]
gi|353769053|gb|EHD49575.1| hypothetical protein SPAR122_1653 [Streptococcus pneumoniae
6901-05]
gi|353776031|gb|EHD56510.1| hypothetical protein SPAR85_1783 [Streptococcus pneumoniae GA44500]
gi|353785349|gb|EHD65768.1| hypothetical protein SPAR125_1666 [Streptococcus pneumoniae
5787-06]
gi|353788104|gb|EHD68502.1| hypothetical protein SPAR124_1638 [Streptococcus pneumoniae
6963-05]
gi|353838096|gb|EHE18177.1| GTPase family protein [Streptococcus pneumoniae GA41277]
gi|353870466|gb|EHE50339.1| GTPase family protein [Streptococcus pneumoniae Netherlands15B-37]
gi|353901840|gb|EHE77370.1| hypothetical protein SPAR23_0873 [Streptococcus pneumoniae GA11426]
gi|379536662|gb|EHZ01848.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04175]
gi|379544353|gb|EHZ09498.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA06083]
gi|379563373|gb|EHZ28377.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17457]
gi|379577027|gb|EHZ41951.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40183]
gi|379578003|gb|EHZ42920.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40410]
gi|379598949|gb|EHZ63734.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47522]
gi|379629205|gb|EHZ93806.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP05]
gi|395881001|gb|EJG92052.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04672]
gi|395909766|gb|EJH20641.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA62681]
Length = 368
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 208/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV + N DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQLTN--DDF-------LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMKRAYEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ + V+ F + + D+
Sbjct: 285 ELKLHRSKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|227524677|ref|ZP_03954726.1| GTP-binding protein [Lactobacillus hilgardii ATCC 8290]
gi|227088161|gb|EEI23473.1| GTP-binding protein [Lactobacillus hilgardii ATCC 8290]
Length = 378
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 181/381 (47%), Gaps = 49/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V C RC LRHY ++ V+ L D DF + L S SG S+++ VVD D +GS
Sbjct: 47 VYCQRCFRLRHYNEIAPVS----LSDDDF----LKLLTSISGTDSLIVYVVDIFDVNGSL 98
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V D V+LV K+D+LP+S+ + W+RQRA
Sbjct: 99 IPGLHRFVGDNP-----------------VLLVGNKLDVLPASIKERKVRDWLRQRANSA 141
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
GI I + +SA N+ + L+D + + +V+ +G N GKSTL+NA+ +
Sbjct: 142 GIRPI-DVELISAKTNFDVDHLLDQIEKYRDGK-DVYVVGVTNVGKSTLINAVIR----- 194
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
+ I +T + PGTTL R++ L + DTPG++ P Q+ L +E
Sbjct: 195 -----QSTGIKELITTSRFPGTTLD--RIDIPLNDGHSIVDTPGIIQPEQMAHHLVGKEL 247
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
LV K +KP+ Y++ ++ G+ R D + + + TV+A L +H K ENA
Sbjct: 248 NLVTPQKTIKPKIYQLNPEQTLFFGGVARFDYDSGDGKHGF-TVYAENNLYIHRTKLENA 306
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
EKH G L PP E R ++ R EF S S D+ GLGW +V
Sbjct: 307 EAFYEKHLGDLLSPP-SENRKDDFPPLERHEFKTSQKS------DVVIEGLGWVTV--PS 357
Query: 514 EAALGVWTYEGVDIVLRNALL 534
+ + W +GV +++R A++
Sbjct: 358 DVVVSGWAPKGVSVLIRPAMI 378
>gi|422422215|ref|ZP_16499168.1| ribosome biogenesis GTPase YqeH [Listeria seeligeri FSL S4-171]
gi|313637776|gb|EFS03129.1| ribosome biogenesis GTPase YqeH [Listeria seeligeri FSL S4-171]
Length = 366
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 134/451 (29%), Positives = 207/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY P +LN NE
Sbjct: 7 CIGCGAIIQTEDPDKIGY--APKSSLN-----------NEQ------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L+HY +++DV L D DF R L S +++++ V
Sbjct: 35 ----------VICKRCFRLKHYNEIQDVA----LTDDDF----LRILNQISTKQALIVYV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS+ + + +GN P V+LV K D+LP SL +
Sbjct: 77 VDIFDFDGSWLPGLPRF----------------AGNNP-VLLVGNKEDVLPKSLKRDKLT 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R RA+E G+S T + VSA + G +L++ + +L + +V+ +G N GKSTL+
Sbjct: 120 RWMRTRAKEQGLSA-TDVVLVSAERGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K E N++ T + PGTTL ++E L L DTPG+++ +Q
Sbjct: 178 NRIIKQASG-------ENNVI---TTSQFPGTTLD--KIEIPLADGNVLVDTPGIINHHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + K + KE+KP +++ ++ + L R+D +S+ V+ S L
Sbjct: 226 XXXFIDTDTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + EK G LQPP E+ ++ L K V F+V DI +G
Sbjct: 284 PIHRTKLEKADALYEKQAGFVLQPPT-EEGMKTLPKLVPYTFNV------KEKADIVFSG 336
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW ++ +G A + W EGV +R +L+
Sbjct: 337 LGWVTIP-EGGAKVTAWVPEGVSATIRTSLV 366
>gi|148994934|ref|ZP_01823936.1| GTP-binding protein [Streptococcus pneumoniae SP9-BS68]
gi|418149106|ref|ZP_12785868.1| GTPase family protein [Streptococcus pneumoniae GA13856]
gi|419453700|ref|ZP_13993670.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP03]
gi|419506630|ref|ZP_14046291.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA49194]
gi|421220833|ref|ZP_15677672.1| hypothetical protein AMCSP05_001569 [Streptococcus pneumoniae
2070425]
gi|421223087|ref|ZP_15679869.1| hypothetical protein AMCSP14_001511 [Streptococcus pneumoniae
2070531]
gi|147926936|gb|EDK77982.1| GTP-binding protein [Streptococcus pneumoniae SP9-BS68]
gi|353811442|gb|EHD91684.1| GTPase family protein [Streptococcus pneumoniae GA13856]
gi|379608544|gb|EHZ73290.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA49194]
gi|379625770|gb|EHZ90396.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP03]
gi|395586743|gb|EJG47110.1| hypothetical protein AMCSP05_001569 [Streptococcus pneumoniae
2070425]
gi|395587067|gb|EJG47429.1| hypothetical protein AMCSP14_001511 [Streptococcus pneumoniae
2070531]
Length = 368
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 208/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV + N DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQLTN--DDF-------LKLLHEVGDSNALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMKRAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ + V+ F + + D+
Sbjct: 285 ELKLHRSKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|309798779|ref|ZP_07693043.1| GTP-binding protein [Streptococcus infantis SK1302]
gi|308117596|gb|EFO55008.1| GTP-binding protein [Streptococcus infantis SK1302]
Length = 368
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 207/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKTGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKAGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMERAHEEGLRPVDVI-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--IAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ K V+ F + D+
Sbjct: 285 ELKLHRTKLEGASDFYDKHLGTLLTPP-NTKEKEDFPKLVQHVFTI------KEKTDLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V+R A++
Sbjct: 338 SGLGW--IRVAGTAKVAVWAPEGVAVVVRKAII 368
>gi|430750628|ref|YP_007213536.1| ribosome biogenesis GTPase YqeH [Thermobacillus composti KWC4]
gi|430734593|gb|AGA58538.1| ribosome biogenesis GTPase YqeH [Thermobacillus composti KWC4]
Length = 375
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 205/459 (44%), Gaps = 88/459 (19%)
Query: 76 EATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGL 135
+AT VC GCGV +Q +P PGY P Q L +
Sbjct: 5 DATTGAPVCSGCGVRLQSESPDKPGYV--PEQALGR------------------------ 38
Query: 136 VVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG 195
+ +C RC +RHY V V V+ DF R L +G
Sbjct: 39 ----------------EDAICRRCFRIRHYNDVTHVAVDQ--DDF------LRMLSGIAG 74
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS 255
S+V+ +VD DF+GS + + V GN P V+LVV KIDLLP
Sbjct: 75 TDSLVVHIVDLFDFEGSVISGLQRFV----------------GNNP-VLLVVNKIDLLPK 117
Query: 256 SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQ 315
S + R +WV+++A+ G+ K ++ SA K G +I+ + L G R +++ +GA
Sbjct: 118 STNWNRVRNWVQRQAKLLGL-KPAEIVLCSAAKRTGFDRVIEAIQALRGGR-DIYVVGAT 175
Query: 316 NAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDT 375
N GKSTL+N + + + ++ LT + PGTTL +R+ L + DT
Sbjct: 176 NVGKSTLINRLIR----------DYSDLDRELTVSRYPGTTLDQIRIP--LDDSRYIIDT 223
Query: 376 PGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYV 435
PG+++P ++T + + + + K LKP Y++ ++ L R D +S
Sbjct: 224 PGIVYPYRLTETVPKGVLQRLLPEKPLKPLVYQLNERQTLFFGALARFDFVRGEPQSF-- 281
Query: 436 TVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSS 495
T++ SP L +H K E A + +H G L PP ++ ++ + W R + S
Sbjct: 282 TLYVSPSLYVHRTKLERADEVYAEHKGELLAPPNADE-LDAIAPWTRHSLRIP----PGS 336
Query: 496 SVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
DI+ +GLGW A + V+ +GV ++LR A++
Sbjct: 337 RTDISISGLGWIRANSSAGAFVEVYAPKGVHVILREAMI 375
>gi|408356444|ref|YP_006844975.1| GTP-binding protein [Amphibacillus xylanus NBRC 15112]
gi|407727215|dbj|BAM47213.1| putative GTP-binding protein [Amphibacillus xylanus NBRC 15112]
Length = 369
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 206/452 (45%), Gaps = 92/452 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q N + PGY P+ L ENE
Sbjct: 9 CQGCGVAIQTENKQEPGYV--PNSAL-------------------------------ENE 35
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
++C RC L++Y +V+DV D DF V + + +S+++ +
Sbjct: 36 V---------IICQRCFRLKNYNEVQDVP----YTDGDFLQMVSQ----IANTKSLIVKM 78
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GSF R + ++ + +V+++ K+DLLP S + +R
Sbjct: 79 VDIFDFNGSFIRGLHRLTGNN-----------------KVIIIGNKVDLLPKSTNLSRVR 121
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+++ A + G++ + ++ +SA G + ++ + +V+ +G+ N GKST +
Sbjct: 122 QWIKKEAADLGVT-VQDVYLISAKTGQGFDE-VKQAIEYHREGQDVYVVGSTNVGKSTFI 179
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + + +T + PGTTLG + + L + L+DTPG+++ Q
Sbjct: 180 NYLINDSVGTKDA----------ITTSYFPGTTLGFIDIP--LDDHSSLYDTPGVVNRGQ 227
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L +E+ KL+ NKE+KPRTY++ + ++ I GL R D + +S T + +
Sbjct: 228 LVHYLAKEDIKLITPNKEIKPRTYQLNSQQTLFIGGLARFDFIKGERQSF--TCYFPNRV 285
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K E A + H G L PP GE ++ K V + +SG VD+ G
Sbjct: 286 ELHRTKLEKADQLYLDHLGTMLTPP-GENTAKDYPKLVEQTIKLSG-----EKVDLVFPG 339
Query: 504 LGWFSVRLKGE-AALGVWTYEGVDIVLRNALL 534
LGW S L GE A + V + V + RN+++
Sbjct: 340 LGWIS--LSGEPATVAVHSPFDVPVSRRNSII 369
>gi|425050125|ref|ZP_18453893.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 509]
gi|403024624|gb|EJY36769.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 509]
Length = 369
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/382 (31%), Positives = 191/382 (50%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLMVVDAADFDGS 212
V C RC LRHY +++DV+ L D DF +L++ G + ++++ VVD DF+GS
Sbjct: 39 VYCQRCFRLRHYNEIQDVS----LTDDDF-----LRLLNELGQKDALIVNVVDIFDFNGS 89
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + V D V+LV K+D+LP SL T+ W+++RA E
Sbjct: 90 LIPGLHRFVGDNP-----------------VLLVGNKVDILPKSLKKTKLTQWMKERAYE 132
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
GI + L SA K+ + L++ + + R +V+ +G N GKSTL+N I K+ A
Sbjct: 133 AGIRPVDVL-LTSAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKSTLINQIIKNT-A 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
G + +T + PGTTL ++E L L DTPG++H +Q+ L +++
Sbjct: 190 G---------VQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRHQMAHYLGKKD 238
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
+++ KE+KP+ Y++ G ++ + GL R D + S + S + +H K E
Sbjct: 239 LRIIAPLKEIKPKVYQLNEGQTLFLGGLARFDFISGNRASF--IAYVSNDVNIHRTKLEK 296
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G LQPP ++ VE + VR EF V DI AGLGW +V
Sbjct: 297 ADEFYQKHVGGLLQPPRPDE-VEAFPELVRFEFSV------KEKTDIVFAGLGWITV--T 347
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
+ W +GVD++ R AL+
Sbjct: 348 APVVIAGWAPKGVDVLKRKALI 369
>gi|419493875|ref|ZP_14033600.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47210]
gi|421290311|ref|ZP_15741061.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA54354]
gi|421305703|ref|ZP_15756357.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA62331]
gi|379592448|gb|EHZ57264.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47210]
gi|395887996|gb|EJG99010.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA54354]
gi|395904661|gb|EJH15575.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA62331]
Length = 368
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 208/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV + N DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQLTN--DDF-------LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMKRAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ + V+ F + + D+
Sbjct: 285 ELKLHRSKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKNKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|418167351|ref|ZP_12804005.1| GTPase family protein [Streptococcus pneumoniae GA17971]
gi|353828517|gb|EHE08655.1| GTPase family protein [Streptococcus pneumoniae GA17971]
Length = 368
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 208/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV L D DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMKRAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ + V+ F + + D+
Sbjct: 285 ELKLHRSKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|257883040|ref|ZP_05662693.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,502]
gi|294621391|ref|ZP_06700563.1| nitric-oxide synthase [Enterococcus faecium U0317]
gi|424802804|ref|ZP_18228264.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium S447]
gi|424856100|ref|ZP_18280363.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R499]
gi|424949331|ref|ZP_18365015.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R496]
gi|424957745|ref|ZP_18372453.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R446]
gi|424962572|ref|ZP_18376901.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1986]
gi|424967486|ref|ZP_18381182.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1140]
gi|424997646|ref|ZP_18409392.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV165]
gi|425002928|ref|ZP_18414329.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV161]
gi|425003344|ref|ZP_18414719.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV102]
gi|425010809|ref|ZP_18421741.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E422]
gi|425017430|ref|ZP_18427934.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C621]
gi|425033754|ref|ZP_18438701.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 515]
gi|431777226|ref|ZP_19565481.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2560]
gi|431783316|ref|ZP_19571434.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E6012]
gi|431785164|ref|ZP_19573195.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E6045]
gi|257818698|gb|EEV46026.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,502]
gi|291599038|gb|EFF30083.1| nitric-oxide synthase [Enterococcus faecium U0317]
gi|402919187|gb|EJX39812.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium S447]
gi|402930526|gb|EJX50173.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R499]
gi|402934665|gb|EJX53986.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R496]
gi|402940056|gb|EJX58914.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1986]
gi|402942813|gb|EJX61369.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R446]
gi|402954340|gb|EJX71973.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1140]
gi|402981963|gb|EJX97464.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV161]
gi|402985706|gb|EJY00893.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV165]
gi|402992292|gb|EJY07009.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV102]
gi|402998745|gb|EJY12988.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E422]
gi|403004336|gb|EJY18151.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C621]
gi|403008623|gb|EJY22118.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 515]
gi|430639710|gb|ELB75576.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2560]
gi|430645517|gb|ELB81031.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E6012]
gi|430648061|gb|ELB83486.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E6045]
Length = 369
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 206/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q P GY P L K GL E
Sbjct: 7 CIGCGAVIQTNKPGELGY--TPQTALEK----------------------GLASGE---- 38
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
V C RC LRHY + +DV+ L D DF +L++ G + ++++
Sbjct: 39 ----------VYCQRCFRLRHYNETQDVS----LTDDDF-----LRLLNELGQKDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + V D V+LV K+D+LP SL T+
Sbjct: 80 VVDIFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKVDILPKSLKKTKL 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+++RA E GI + L SA K+ + L++ + + R +V+ +G N GKSTL
Sbjct: 123 TQWMKERAYEAGIRPVDVL-LTSAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K+ AG + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIKNT-AG---------VQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ +++ KE+KP+ Y++ G ++ + GL R D + S + S
Sbjct: 229 QMAHYLGKKDLRIIAPLKEIKPKVYQLNEGQTLFLGGLARFDFISGNRASF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+ +H K E A +KH G LQPP ++ VE + VR EF V DI A
Sbjct: 287 VNIHRTKLEKADEFYQKHVGGLLQPPRPDE-VEAFPELVRFEFSV------KEKTDIVFA 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V + W +GVD++ R AL+
Sbjct: 340 GLGWITV--TAPVVIAGWAPKGVDVLKRKALI 369
>gi|322392356|ref|ZP_08065817.1| GTP-binding protein [Streptococcus peroris ATCC 700780]
gi|321144891|gb|EFX40291.1| GTP-binding protein [Streptococcus peroris ATCC 700780]
Length = 368
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 190/382 (49%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V C RC LRHY ++ DV L D DF KL+ G + ++V+ V+D DF+GS
Sbjct: 38 VYCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + VS GN V+LV K D+LP S+ + W+ +RA E
Sbjct: 89 VIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKHGKISQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + + SA ++ +ID + + K +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPVDVV-LTSAQNKQAIREVIDKI-EYYRKGRDVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
++N++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KE+KP+TY++ ++ + GL R D + T + L LH K E
Sbjct: 238 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRTKLEG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K E+ K V F++ + D+ +GLGW +R+
Sbjct: 296 ANDFYDKHLGTLLTPP-NSKEKEDFPKLVEYVFNIKDKT------DLVISGLGW--IRVT 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + VW EGV +V R A++
Sbjct: 347 GTAKVAVWAPEGVAVVTRKAII 368
>gi|335031074|ref|ZP_08524532.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus SK52 = DSM
20563]
gi|333770542|gb|EGL47570.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus SK52 = DSM
20563]
Length = 368
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 187/385 (48%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEITDVQ----LTDDDF----LRLLHEVGDSNALVVNVVDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ ++ W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKTSKVTQWLMER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LI+ + R +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKELIEKIEQYRKGR-DVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ GD E +T + PGTTL ++E L + ++DTPG++H +Q+ L+
Sbjct: 187 IT----GDKEV------ITTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLS 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVSGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
A EKH G L PP +K V + + V+ E + + D+ +GLGW +
Sbjct: 293 LAGAGEFYEKHVGSLLTPP-SKKEVSDFPQLVKHELKIEAKT------DVVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + VW EGV +V R A++
Sbjct: 344 RVTGPAQIAVWAPEGVAVVTRKAII 368
>gi|15901581|ref|NP_346185.1| GTP-binding protein YqeH [Streptococcus pneumoniae TIGR4]
gi|111657472|ref|ZP_01408219.1| hypothetical protein SpneT_02001323 [Streptococcus pneumoniae
TIGR4]
gi|149011381|ref|ZP_01832628.1| GTP-binding protein [Streptococcus pneumoniae SP19-BS75]
gi|149020832|ref|ZP_01835361.1| GTP-binding protein [Streptococcus pneumoniae SP23-BS72]
gi|168483288|ref|ZP_02708240.1| GTP-binding protein [Streptococcus pneumoniae CDC1873-00]
gi|168488531|ref|ZP_02712730.1| GTP-binding protein [Streptococcus pneumoniae SP195]
gi|168491368|ref|ZP_02715511.1| GTP-binding protein [Streptococcus pneumoniae CDC0288-04]
gi|194396922|ref|YP_002038359.1| GTP-binding protein YqeH [Streptococcus pneumoniae G54]
gi|303254361|ref|ZP_07340469.1| GTP-binding protein YqeH [Streptococcus pneumoniae BS455]
gi|303258686|ref|ZP_07344666.1| GTP-binding protein [Streptococcus pneumoniae SP-BS293]
gi|303261849|ref|ZP_07347795.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS292]
gi|303263712|ref|ZP_07349634.1| GTP-binding protein [Streptococcus pneumoniae BS397]
gi|303266652|ref|ZP_07352536.1| GTP-binding protein [Streptococcus pneumoniae BS457]
gi|303268542|ref|ZP_07354335.1| GTP-binding protein [Streptococcus pneumoniae BS458]
gi|307127963|ref|YP_003879994.1| GTP-binding protein [Streptococcus pneumoniae 670-6B]
gi|387759860|ref|YP_006066838.1| GTP-binding protein [Streptococcus pneumoniae INV200]
gi|410477116|ref|YP_006743875.1| GTP-binding protein [Streptococcus pneumoniae gamPNI0373]
gi|417679716|ref|ZP_12329112.1| GTPase family protein [Streptococcus pneumoniae GA17570]
gi|417687199|ref|ZP_12336473.1| GTPase family protein [Streptococcus pneumoniae GA41301]
gi|418087420|ref|ZP_12724589.1| hypothetical protein SPAR87_1205 [Streptococcus pneumoniae GA47033]
gi|418103440|ref|ZP_12740512.1| hypothetical protein SPAR143_1719 [Streptococcus pneumoniae NP070]
gi|418121805|ref|ZP_12758748.1| hypothetical protein SPAR80_1676 [Streptococcus pneumoniae GA44194]
gi|418130897|ref|ZP_12767780.1| hypothetical protein SPAR14_1696 [Streptococcus pneumoniae GA07643]
gi|418133209|ref|ZP_12770079.1| hypothetical protein SPAR22_1792 [Streptococcus pneumoniae GA11304]
gi|418140074|ref|ZP_12776899.1| hypothetical protein SPAR28_1713 [Streptococcus pneumoniae GA13338]
gi|418162793|ref|ZP_12799474.1| GTPase family protein [Streptococcus pneumoniae GA17328]
gi|418176539|ref|ZP_12813130.1| GTPase family protein [Streptococcus pneumoniae GA41437]
gi|418181104|ref|ZP_12817673.1| GTPase family protein [Streptococcus pneumoniae GA41688]
gi|418187727|ref|ZP_12824250.1| hypothetical protein SPAR92_1701 [Streptococcus pneumoniae GA47360]
gi|418189987|ref|ZP_12826499.1| hypothetical protein SPAR94_1751 [Streptococcus pneumoniae GA47373]
gi|418192189|ref|ZP_12828691.1| hypothetical protein SPAR96_1722 [Streptococcus pneumoniae GA47388]
gi|418194316|ref|ZP_12830805.1| hypothetical protein SPAR119_1602 [Streptococcus pneumoniae
GA47439]
gi|418202958|ref|ZP_12839387.1| GTPase family protein [Streptococcus pneumoniae GA52306]
gi|418214947|ref|ZP_12841681.1| hypothetical protein SPAR118_1750 [Streptococcus pneumoniae
GA54644]
gi|418219476|ref|ZP_12846141.1| hypothetical protein SPAR145_1764 [Streptococcus pneumoniae NP127]
gi|418230522|ref|ZP_12857121.1| hypothetical protein SPAR136_1771 [Streptococcus pneumoniae
EU-NP01]
gi|418234949|ref|ZP_12861525.1| hypothetical protein SPAR17_1732 [Streptococcus pneumoniae GA08780]
gi|418239274|ref|ZP_12865825.1| hypothetical protein SPAR146_1731 [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419456099|ref|ZP_13996056.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP04]
gi|419462910|ref|ZP_14002813.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02714]
gi|419476080|ref|ZP_14015916.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA14688]
gi|419478389|ref|ZP_14018212.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA18068]
gi|419482786|ref|ZP_14022573.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40563]
gi|419484978|ref|ZP_14024753.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA43257]
gi|419487226|ref|ZP_14026988.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA44128]
gi|419491647|ref|ZP_14031385.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47179]
gi|419508845|ref|ZP_14048496.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA49542]
gi|419515255|ref|ZP_14054880.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae
England14-9]
gi|419521681|ref|ZP_14061276.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05245]
gi|419526463|ref|ZP_14066021.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA14373]
gi|419532946|ref|ZP_14072461.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47794]
gi|421209516|ref|ZP_15666529.1| hypothetical protein AMCSP11_001704 [Streptococcus pneumoniae
2070005]
gi|421225586|ref|ZP_15682324.1| hypothetical protein AMCSP06_001724 [Streptococcus pneumoniae
2070768]
gi|421227944|ref|ZP_15684646.1| hypothetical protein AMCSP08_001763 [Streptococcus pneumoniae
2072047]
gi|421236837|ref|ZP_15693434.1| GTP-binding protein [Streptococcus pneumoniae 2071004]
gi|421241211|ref|ZP_15697756.1| GTP-binding protein [Streptococcus pneumoniae 2080913]
gi|421243681|ref|ZP_15700193.1| GTP-binding protein [Streptococcus pneumoniae 2081074]
gi|421248020|ref|ZP_15704498.1| GTP-binding protein [Streptococcus pneumoniae 2082170]
gi|421271160|ref|ZP_15722014.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR48]
gi|421275460|ref|ZP_15726289.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA52612]
gi|421279526|ref|ZP_15730332.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17301]
gi|421285894|ref|ZP_15736670.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60190]
gi|421294883|ref|ZP_15745604.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA56113]
gi|421296582|ref|ZP_15747291.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58581]
gi|421301603|ref|ZP_15752273.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19998]
gi|444387594|ref|ZP_21185613.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae
PCS125219]
gi|444389152|ref|ZP_21187069.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS70012]
gi|444392013|ref|ZP_21189773.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS81218]
gi|444394829|ref|ZP_21192379.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0002]
gi|444398200|ref|ZP_21195683.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0006]
gi|444399303|ref|ZP_21196771.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0007]
gi|444402501|ref|ZP_21199664.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0008]
gi|444405544|ref|ZP_21202419.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0009]
gi|444407818|ref|ZP_21204485.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0010]
gi|444415694|ref|ZP_21211923.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0199]
gi|444417246|ref|ZP_21213299.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0360]
gi|444419622|ref|ZP_21215470.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0427]
gi|14973245|gb|AAK75825.1| GTP-binding protein [Streptococcus pneumoniae TIGR4]
gi|147764371|gb|EDK71302.1| GTP-binding protein [Streptococcus pneumoniae SP19-BS75]
gi|147930473|gb|EDK81456.1| GTP-binding protein [Streptococcus pneumoniae SP23-BS72]
gi|172043326|gb|EDT51372.1| GTP-binding protein [Streptococcus pneumoniae CDC1873-00]
gi|183572678|gb|EDT93206.1| GTP-binding protein [Streptococcus pneumoniae SP195]
gi|183574264|gb|EDT94792.1| GTP-binding protein [Streptococcus pneumoniae CDC0288-04]
gi|194356589|gb|ACF55037.1| GTP-binding protein [Streptococcus pneumoniae G54]
gi|301802449|emb|CBW35205.1| GTP-binding protein [Streptococcus pneumoniae INV200]
gi|302598712|gb|EFL65750.1| GTP-binding protein YqeH [Streptococcus pneumoniae BS455]
gi|302636932|gb|EFL67421.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS292]
gi|302640187|gb|EFL70642.1| GTP-binding protein [Streptococcus pneumoniae SP-BS293]
gi|302641937|gb|EFL72291.1| GTP-binding protein [Streptococcus pneumoniae BS458]
gi|302643814|gb|EFL74077.1| GTP-binding protein [Streptococcus pneumoniae BS457]
gi|302646750|gb|EFL76975.1| GTP-binding protein [Streptococcus pneumoniae BS397]
gi|306485025|gb|ADM91894.1| GTP-binding protein [Streptococcus pneumoniae 670-6B]
gi|332072581|gb|EGI83064.1| GTPase family protein [Streptococcus pneumoniae GA17570]
gi|332074089|gb|EGI84567.1| GTPase family protein [Streptococcus pneumoniae GA41301]
gi|353758436|gb|EHD39028.1| hypothetical protein SPAR87_1205 [Streptococcus pneumoniae GA47033]
gi|353774741|gb|EHD55228.1| hypothetical protein SPAR143_1719 [Streptococcus pneumoniae NP070]
gi|353792641|gb|EHD73013.1| hypothetical protein SPAR80_1676 [Streptococcus pneumoniae GA44194]
gi|353802221|gb|EHD82521.1| hypothetical protein SPAR14_1696 [Streptococcus pneumoniae GA07643]
gi|353804651|gb|EHD84931.1| hypothetical protein SPAR22_1792 [Streptococcus pneumoniae GA11304]
gi|353826855|gb|EHE07012.1| GTPase family protein [Streptococcus pneumoniae GA17328]
gi|353840610|gb|EHE20674.1| GTPase family protein [Streptococcus pneumoniae GA41437]
gi|353843176|gb|EHE23221.1| GTPase family protein [Streptococcus pneumoniae GA41688]
gi|353849712|gb|EHE29717.1| hypothetical protein SPAR92_1701 [Streptococcus pneumoniae GA47360]
gi|353853714|gb|EHE33695.1| hypothetical protein SPAR94_1751 [Streptococcus pneumoniae GA47373]
gi|353855275|gb|EHE35245.1| hypothetical protein SPAR96_1722 [Streptococcus pneumoniae GA47388]
gi|353857894|gb|EHE37856.1| hypothetical protein SPAR119_1602 [Streptococcus pneumoniae
GA47439]
gi|353867515|gb|EHE47410.1| GTPase family protein [Streptococcus pneumoniae GA52306]
gi|353869677|gb|EHE49558.1| hypothetical protein SPAR118_1750 [Streptococcus pneumoniae
GA54644]
gi|353873836|gb|EHE53695.1| hypothetical protein SPAR145_1764 [Streptococcus pneumoniae NP127]
gi|353885403|gb|EHE65192.1| hypothetical protein SPAR136_1771 [Streptococcus pneumoniae
EU-NP01]
gi|353886571|gb|EHE66353.1| hypothetical protein SPAR17_1732 [Streptococcus pneumoniae GA08780]
gi|353892265|gb|EHE72014.1| hypothetical protein SPAR146_1731 [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|353904853|gb|EHE80303.1| hypothetical protein SPAR28_1713 [Streptococcus pneumoniae GA13338]
gi|379530342|gb|EHY95582.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02714]
gi|379538981|gb|EHZ04161.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05245]
gi|379557103|gb|EHZ22150.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA14373]
gi|379558862|gb|EHZ23894.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA14688]
gi|379564901|gb|EHZ29896.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA18068]
gi|379579378|gb|EHZ44285.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40563]
gi|379581731|gb|EHZ46615.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA43257]
gi|379585595|gb|EHZ50451.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA44128]
gi|379593009|gb|EHZ57824.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47179]
gi|379605466|gb|EHZ70217.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47794]
gi|379610799|gb|EHZ75529.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA49542]
gi|379628075|gb|EHZ92681.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP04]
gi|379635804|gb|EIA00363.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae
England14-9]
gi|395573612|gb|EJG34202.1| hypothetical protein AMCSP11_001704 [Streptococcus pneumoniae
2070005]
gi|395589073|gb|EJG49395.1| hypothetical protein AMCSP06_001724 [Streptococcus pneumoniae
2070768]
gi|395594228|gb|EJG54468.1| hypothetical protein AMCSP08_001763 [Streptococcus pneumoniae
2072047]
gi|395601600|gb|EJG61747.1| GTP-binding protein [Streptococcus pneumoniae 2071004]
gi|395606330|gb|EJG66437.1| GTP-binding protein [Streptococcus pneumoniae 2081074]
gi|395607589|gb|EJG67686.1| GTP-binding protein [Streptococcus pneumoniae 2080913]
gi|395612894|gb|EJG72928.1| GTP-binding protein [Streptococcus pneumoniae 2082170]
gi|395867374|gb|EJG78498.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR48]
gi|395873424|gb|EJG84516.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA52612]
gi|395879019|gb|EJG90081.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17301]
gi|395885881|gb|EJG96902.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60190]
gi|395893452|gb|EJH04439.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA56113]
gi|395895455|gb|EJH06430.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58581]
gi|395899163|gb|EJH10107.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19998]
gi|406370061|gb|AFS43751.1| GTP-binding protein [Streptococcus pneumoniae gamPNI0373]
gi|444252472|gb|ELU58935.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae
PCS125219]
gi|444257752|gb|ELU64085.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS70012]
gi|444259447|gb|ELU65761.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0002]
gi|444260857|gb|ELU67165.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0006]
gi|444264172|gb|ELU70277.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS81218]
gi|444266357|gb|ELU72314.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0008]
gi|444268869|gb|ELU74693.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0007]
gi|444271414|gb|ELU77165.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0010]
gi|444273115|gb|ELU78796.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0009]
gi|444279221|gb|ELU84627.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0199]
gi|444284412|gb|ELU89560.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0360]
gi|444286444|gb|ELU91426.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0427]
Length = 368
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 208/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV + N DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQLTN--DDF-------LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMKRAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ + V+ F + + D+
Sbjct: 285 ELKLHRSKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|227510525|ref|ZP_03940574.1| GTP-binding protein [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227190177|gb|EEI70244.1| GTP-binding protein [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 378
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 181/381 (47%), Gaps = 49/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V C RC LRHY ++ V+ L D DF + L S SG S+++ VVD D +GS
Sbjct: 47 VYCQRCFRLRHYNEIAPVS----LSDDDF----LKLLTSISGTDSLIVYVVDIFDVNGSL 98
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V D V+LV K+D+LP+S+ + W+RQRA
Sbjct: 99 IPGLHRFVGDNP-----------------VLLVGNKLDVLPASIKERKVRDWLRQRANAA 141
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
GI I + +SA N+ + L+D + + +V+ +G N GKSTL+NA+ +
Sbjct: 142 GIRPI-DVELISAKTNFDVDHLLDQIEKYRDGK-DVYVVGVTNVGKSTLINAVIR----- 194
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
+ I +T + PGTTL R++ L + DTPG++ P Q+ L +E
Sbjct: 195 -----QSTGIKELITTSRFPGTTLD--RIDIPLNDGHSIVDTPGIIQPEQMAHHLVGKEL 247
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
LV K +KP+ Y++ ++ G+ R D + + + TV+A L +H K ENA
Sbjct: 248 NLVTPQKTIKPKIYQLNPEQTLFFGGVARFDYDSGDGKHGF-TVYAENNLYIHRTKLENA 306
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
EKH G L PP E R ++ R EF S S D+ GLGW +V
Sbjct: 307 EAFYEKHLGDLLSPP-SENRKDDFPPLERHEFKTSQKS------DVVIEGLGWVTV--PS 357
Query: 514 EAALGVWTYEGVDIVLRNALL 534
+ + W +GV +++R A++
Sbjct: 358 DVVVSGWAPKGVSVLIRPAMI 378
>gi|418126403|ref|ZP_12763308.1| hypothetical protein SPAR86_1773 [Streptococcus pneumoniae GA44511]
gi|353795467|gb|EHD75815.1| hypothetical protein SPAR86_1773 [Streptococcus pneumoniae GA44511]
Length = 336
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 189/382 (49%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V C RC LRHY ++ DV + N DF KL+ G + ++V+ V+D DF+GS
Sbjct: 6 VYCQRCFRLRHYNEITDVQLTN--DDF-------LKLLHEVGDSDALVVNVIDIFDFNGS 56
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + VS GN V+LV K D+LP S+ + W+ +RA E
Sbjct: 57 VIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGKISQWLMKRAHE 99
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + + SA +K +ID + R +V+ +G N GKSTL+NAI + +
Sbjct: 100 EGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITG 157
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
++N++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 158 -------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 205
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KE+KP+TY++ ++ + GL R D + T + L LH K E
Sbjct: 206 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRSKLEG 263
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K E+ + V+ F + + D+ +GLGW +R+
Sbjct: 264 ASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVISGLGW--IRVT 314
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + VW EGV +V R A++
Sbjct: 315 GIAKVAVWAPEGVAVVTRKAII 336
>gi|332686084|ref|YP_004455858.1| GTP-binding protein YqeH [Melissococcus plutonius ATCC 35311]
gi|332370093|dbj|BAK21049.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Melissococcus plutonius ATCC 35311]
Length = 369
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 204/451 (45%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q PK GY + ++ +KG
Sbjct: 7 CIGCGAIIQTETPKKLGYLPK-----------------------SAYEKG---------- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
K ++ + C RC LRHY +++ V + N DF R L + ++++ +
Sbjct: 34 -----KEKQEIYCQRCFRLRHYNEIQSVDLTN--DDF------LRLLNELNKEDALIINL 80
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS +++ V GN P ++L+ K D+LP SL +
Sbjct: 81 VDIFDFDGSLISSLSRFV----------------GNNP-ILLIGNKRDILPKSLKKHKLI 123
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+++RA ++G+ I + +SA + L++ + R +V+ +G N GKSTL+
Sbjct: 124 KWMKERAYDEGLRPID-IQLISAKNPSEIVELLETIEYYRNGR-DVYIVGVTNVGKSTLI 181
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K GEE+ I T + PGTTL +++ L L DTPG++H Q
Sbjct: 182 NQIIKQTS------GEEEVI----TTSQFPGTTLDKIKIP--LADGQFLIDTPGIIHHYQ 229
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L ++E K + KE+KP+ Y++ AG ++ G+ R D S + + L
Sbjct: 230 MAHYLGKKELKKIMPKKEIKPKIYQLNAGQTLFFGGMARFDFIMGDRNSF--IAYLANGL 287
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K NA EKH G L+PP +K V + + VR EF + S DI +G
Sbjct: 288 TIHRTKMANADAFYEKHLGGLLEPP-NQKEVADFPELVRYEFSIKEKS------DIVFSG 340
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V G A W +GV ++ R AL+
Sbjct: 341 LGWITVTSPGIVA--GWAPKGVSVLKRKALI 369
>gi|315303239|ref|ZP_07873887.1| ribosome biogenesis GTPase YqeH [Listeria ivanovii FSL F6-596]
gi|313628396|gb|EFR96881.1| ribosome biogenesis GTPase YqeH [Listeria ivanovii FSL F6-596]
Length = 366
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 207/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY P +LN NE
Sbjct: 7 CIGCGAIIQTEDPDKIGY--APKSSLN-----------NEQ------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L++Y +++DV L D DF R L S +++++ V
Sbjct: 35 ----------VICKRCFRLKYYNEIQDVA----LTDDDF----LRILNQISTKQALIVYV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS+ + + +GN P V+LV K D+LP SL +
Sbjct: 77 VDIFDFDGSWLPGLPRF----------------AGNNP-VLLVGNKEDVLPKSLKRDKLT 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R RA+E G+ T + VSA K G SL++ + +L + +V+ +G N GKSTL+
Sbjct: 120 RWMRTRAKEQGLVA-TDVVLVSAEKGHGFDSLLEKIEELRNGQ-DVYVVGCTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K E N++ T + PGTTL ++E L L DTPG+++ +Q
Sbjct: 178 NRIIKQASG-------ENNVI---TTSQFPGTTLD--KIEIPLADGNVLVDTPGIINHHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + K + KE+KP +++ ++ + L R+D +S+ V+AS L
Sbjct: 226 MAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYASNNL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + EK G LQPP E+ ++ L K V F+V DI +G
Sbjct: 284 PIHRTKLEKADALYEKQAGLVLQPPT-EEGMKTLPKLVPYTFNV------KEKADIVFSG 336
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW ++ +G A + W EGV +R +L+
Sbjct: 337 LGWVTIP-EGGAKITAWVPEGVSATIRTSLV 366
>gi|299822864|ref|ZP_07054750.1| ribosome biogenesis GTPase YqeH [Listeria grayi DSM 20601]
gi|299816393|gb|EFI83631.1| ribosome biogenesis GTPase YqeH [Listeria grayi DSM 20601]
Length = 366
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 205/452 (45%), Gaps = 93/452 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P+ GY P +L+K
Sbjct: 7 CIGCGAVIQTEDPEKIGY--APKSSLDK-------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
++C RC L+HY +++DV+ L D DF K+++ GA+ ++++
Sbjct: 33 --------DTIICRRCFRLKHYNEIQDVS----LTDDDF-----LKILNTIGAKKALIVY 75
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DFDGS+ + + D V+LV K DLLP SL +
Sbjct: 76 VVDIFDFDGSWLPGLNRFAGDNP-----------------VLLVGNKADLLPKSLKHDKL 118
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R R+RE G+ + VSA KN G L+D + DL G +V+ +G N GKSTL
Sbjct: 119 IKWMRGRSRELGLQAKDAV-LVSAEKNTGFDELLDTIDDLRGGE-DVYIVGCTNVGKSTL 176
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K E N+V T + PGTTL ++E L L DTPG+++ +
Sbjct: 177 INQIIKRASG-------ESNVV---TTSQFPGTTLD--KIEIPLADGKLLVDTPGIINHH 224
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ ++ + KL+ E+KP +++ ++ L R+D E +S V+ S
Sbjct: 225 QMAHFVSGKTLKLMMPKSEIKPLVFQLNEEQTLFFGALARLDYESGGRKSF--VVYMSNQ 282
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L H K E A + E G L PP E+ + +L K V +F + DI +
Sbjct: 283 LKTHRTKLEKATQLYETQAGEVLAPPTKEE-IADLPKLVPYQFQLKEKQ------DIVFS 335
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V +G A + W EGV++ +R +L+
Sbjct: 336 GLGWVTVP-EGNAKVTAWVPEGVNVSIRRSLV 366
>gi|225857361|ref|YP_002738872.1| GTP-binding protein YqeH [Streptococcus pneumoniae P1031]
gi|444409512|ref|ZP_21206102.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0076]
gi|444412894|ref|ZP_21209213.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0153]
gi|444421884|ref|ZP_21217552.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0446]
gi|225725831|gb|ACO21683.1| GTP-binding protein [Streptococcus pneumoniae P1031]
gi|444274133|gb|ELU79788.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0153]
gi|444279361|gb|ELU84762.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0076]
gi|444288836|gb|ELU93725.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0446]
Length = 368
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 208/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV + N DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQLTN--DDF-------LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMKRAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ + V+ F + + D+
Sbjct: 285 ELKLHRSKFEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|335029055|ref|ZP_08522567.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis SK1076]
gi|334269456|gb|EGL87873.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis SK1076]
Length = 368
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 189/382 (49%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V C RC LRHY ++ DV L D DF KL+ G + ++V+ V+D DF+GS
Sbjct: 38 VYCQRCFRLRHYNEITDVQ----LTDDDF-----LKLLHEVGDSDALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + VS GN V+LV K D+LP S+ + W+ +RA E
Sbjct: 89 VIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKAGKISQWLMERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+G+ + + SA +K +I+ + R +V+ +G N GKSTL+NAI + +
Sbjct: 132 EGLRPVDVV-LTSAQNKHAIKEVIEKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
++N++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KE+KP+TY++ ++ + GL R D + T + L LH K E
Sbjct: 238 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRTKLEG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K E+ K V+ F + + D+ +GLGW +R+
Sbjct: 296 ASDFYDKHLGTLLTPP-NSKEKEDFPKLVQHVFTIKDKT------DLVISGLGW--IRVT 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + VW EGV +V R A++
Sbjct: 347 GTAKVAVWAPEGVAVVTRKAII 368
>gi|317495823|ref|ZP_07954186.1| ribosome biogenesis GTPase YqeH [Gemella morbillorum M424]
gi|316914000|gb|EFV35483.1| ribosome biogenesis GTPase YqeH [Gemella morbillorum M424]
Length = 373
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 190/385 (49%), Gaps = 46/385 (11%)
Query: 150 HEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADF 209
E +VC RC L++Y +V DV L DF + + + S +++ VVD DF
Sbjct: 35 EENNLVCKRCFRLKNYNEVSDVE----LGAEDF----YKLIKTLSKKDGLIVKVVDIFDF 86
Query: 210 DGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
GS+ V +V GN +VLV K+DLLP S+ + + W+ +
Sbjct: 87 SGSWIEDVIDIV----------------GNNKDIVLVANKLDLLPKSVKQNKIKQWLFKM 130
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
+ GI K+ + +SA+KN G++ + +L + +V+ IGA N GKST +N K
Sbjct: 131 LKAKGI-KVKDVLLISAIKNHGIEEAAARIDELRNGK-DVYIIGATNVGKSTFIN---KL 185
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
++ G +KN++ T + PGTTLG++ + L ++DTPG++ I L
Sbjct: 186 IELTTG----DKNVI---TTSHFPGTTLGMIEIP--LDRATSIYDTPGIILDYDIAHYLD 236
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ KLV KE+K R +++ A S+ G+ R+D + +S T++AS + +H K
Sbjct: 237 AKSLKLVMPKKEIKARVFQLNAEQSLFFGGMARVDFVKGERQSF--TLYASNLVDIHRTK 294
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
NA + EKH G L+PP E + V+K F + D +DI +GLGW +V
Sbjct: 295 LSNADALFEKHLGTLLKPPF-EDNISIFKNQVKKNFKI-----DDRKIDIVISGLGWITV 348
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
+ ++ E +++ +R +++
Sbjct: 349 NSDSGCEIDIYVPEEIEVFVRESII 373
>gi|148997805|ref|ZP_01825369.1| GTP-binding protein [Streptococcus pneumoniae SP11-BS70]
gi|168575059|ref|ZP_02721022.1| GTP-binding protein [Streptococcus pneumoniae MLV-016]
gi|307068375|ref|YP_003877341.1| putative GTPase [Streptococcus pneumoniae AP200]
gi|419471635|ref|ZP_14011494.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA07914]
gi|419504483|ref|ZP_14044151.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47760]
gi|421239079|ref|ZP_15695643.1| GTP-binding protein [Streptococcus pneumoniae 2071247]
gi|421314623|ref|ZP_15765210.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47562]
gi|147756304|gb|EDK63346.1| GTP-binding protein [Streptococcus pneumoniae SP11-BS70]
gi|183578795|gb|EDT99323.1| GTP-binding protein [Streptococcus pneumoniae MLV-016]
gi|306409912|gb|ADM85339.1| Predicted GTPase [Streptococcus pneumoniae AP200]
gi|379546351|gb|EHZ11490.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA07914]
gi|379605871|gb|EHZ70621.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47760]
gi|395600722|gb|EJG60877.1| GTP-binding protein [Streptococcus pneumoniae 2071247]
gi|395913308|gb|EJH24161.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47562]
Length = 368
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 208/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV + N DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQLTN--DDF-------LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMKRAYEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ + V+ F + + D+
Sbjct: 285 ELKLHRSKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|417091550|ref|ZP_11956427.1| GTP-binding protein YqeH [Streptococcus suis R61]
gi|353533158|gb|EHC02825.1| GTP-binding protein YqeH [Streptococcus suis R61]
Length = 368
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 193/382 (50%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
+ C RC LRHY ++ DV + D DF KL+ + G + ++V+ V+D DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVNIS----DDDF-----LKLLHSVGESDALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + +S GN V+LV K D+LP S+ + W+ +RA E
Sbjct: 89 VIPGLPRFIS---------------GN--DVLLVGNKQDILPKSVKTGKVTQWLTERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + + SA +K LI+ + R +V+ +G N GKSTL+NAI + +
Sbjct: 132 IGMRPVDVV-LTSAQNKQAIKDLIEKIEQYRKGR-DVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
+K+++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DKDVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K ++ KE+KP+TY++ ++ +AGL R D + T + L LH K +
Sbjct: 238 LKYISPRKEIKPKTYQLNPEQTLFLAGLGRFDFVAGERQGF--TAFFDNELQLHRTKLQG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K ++E + VR EF + + D+ +GLGW +R+
Sbjct: 296 ASEFYQKHAGSLLVPPT-SKELKEFPELVRHEFTI------NEKTDVVFSGLGW--IRVN 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
+A + W +GVD+V+R A++
Sbjct: 347 EKAKIAAWAPKGVDVVIRKAII 368
>gi|194466643|ref|ZP_03072630.1| Nitric-oxide synthase [Lactobacillus reuteri 100-23]
gi|194453679|gb|EDX42576.1| Nitric-oxide synthase [Lactobacillus reuteri 100-23]
Length = 375
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 201/451 (44%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY + ++L+KG E
Sbjct: 13 CIGCGSIIQTEDPNGLGYTPK-----------------------SALEKG--------KE 41
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ V+ L D DF R L A ++++ V
Sbjct: 42 TGEL-------YCQRCFRLRHYNEIAPVS----LTDDDF----LRLLNQIRDANALIVYV 86
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS + + V D V+LV K DLLP SL +
Sbjct: 87 VDVFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKEDLLPRSLRRPKLT 129
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ+A G+ I + VSA KN + L+D V++ +V+ +G N GKSTL+
Sbjct: 130 DWIRQQANIAGLRPIDTV-LVSAKKNHQIDHLLD-VIEKYRHNRDVYVVGVTNVGKSTLI 187
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K + + +T + PGTTL ++E L L DTPG++H Q
Sbjct: 188 NQIIK----------QRTGVKELITTSRFPGTTLD--KIEIPLDDGHVLVDTPGIIHQEQ 235
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ ++ K+V KE+KP+TY++ G ++ + G+ R D E + + L
Sbjct: 236 MAHVLSPKDLKIVAPQKEIKPKTYQLNDGQTLFLGGVARFDYLHG--ERAGMVAYFDNNL 293
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K NA KH G L PP +++ + R EFH++ S DI G
Sbjct: 294 PIHRTKLSNADNFYAKHLGDLLTPPTSDEK-DSFPPLERYEFHITEKS------DIVFEG 346
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V K A W +GV ++R A++
Sbjct: 347 LGWITVPAKTTVA--AWVPKGVGALVRRAMI 375
>gi|422419093|ref|ZP_16496048.1| ribosome biogenesis GTPase YqeH [Listeria seeligeri FSL N1-067]
gi|313633186|gb|EFS00066.1| ribosome biogenesis GTPase YqeH [Listeria seeligeri FSL N1-067]
Length = 366
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/451 (29%), Positives = 207/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY P +LN NE
Sbjct: 7 CIGCGAIIQTEDPDKIGY--APKSSLN-----------NEQ------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L+HY +++DV L D DF R L S +++++ V
Sbjct: 35 ----------VICKRCFRLKHYNEIQDVA----LTDDDF----LRILNQISTKQALIVYV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS+ + + +GN P V+LV K D+LP SL +
Sbjct: 77 VDIFDFDGSWLPGLPRF----------------AGNNP-VLLVGNKEDVLPKSLKRDKLT 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R RA+E G+S T + VSA + G L++ + +L + +V+ +G N GKSTL+
Sbjct: 120 RWMRTRAKEQGLSA-TDVVLVSAERGHGFDILLEKIEELRNGQ-DVYVVGCTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K E N++ T + PGTTL ++E L L DTPG+++ +Q
Sbjct: 178 NRIIKQASG-------ENNVI---TTSQFPGTTLD--KIEIPLADGNVLVDTPGIINHHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + + K + KE+KP +++ ++ + L R+D +S+ V+ S L
Sbjct: 226 MAHFIDTDTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + EK G LQPP E+ ++ L K V F+V DI +G
Sbjct: 284 PIHRTKLEKADALYEKQAGFVLQPPT-EEGMKTLPKLVPYTFNV------KEKADIVFSG 336
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW ++ +G A + W EGV +R +L+
Sbjct: 337 LGWVTIP-EGGAKVTAWVPEGVSATIRTSLV 366
>gi|191638679|ref|YP_001987845.1| GTP-binding protein YqeH [Lactobacillus casei BL23]
gi|190712981|emb|CAQ66987.1| Predicted GTPase [Lactobacillus casei BL23]
Length = 356
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 203/447 (45%), Gaps = 94/447 (21%)
Query: 91 MQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENETSEVKKH 150
MQ T+PK PGY P L+K + ++E
Sbjct: 1 MQTTDPKKPGYL--PKATLSKA--------------------------DPDDE------- 25
Query: 151 EKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADF 209
+ C RC LRHY ++ VT L D DF +L++A G + ++++ V+D DF
Sbjct: 26 ---IYCQRCFRLRHYNEIAPVT----LTDDDF-----LRLLNAIGESNALIVNVIDIFDF 73
Query: 210 DGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
+GS + + V D V+LV K D+LP SL+P R ++W++Q+
Sbjct: 74 NGSVIPGLHRFVGDNP-----------------VILVGNKADVLPKSLNPNRLKNWLQQQ 116
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A+ G+ + + SA K +G+ L+D + R +V+ +G N GKSTL+N I K
Sbjct: 117 AKAQGLRPVATM-LASAKKGFGVDELLDAIEKYRDHR-DVYVVGVTNTGKSTLINRIIK- 173
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
E + +T + PGTTL R+ L L DTPG++H +Q+ +
Sbjct: 174 ---------ELTGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRHQMAHFVG 222
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
++ KLV+ +KP TY++ G +I + GL R D S ++ L LH K
Sbjct: 223 PKDLKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRNSF--VIYTDNQLTLHRTK 280
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
ENA +KH G L PP ++ V + VR EF D+ AGLGW +V
Sbjct: 281 LENADDFYQKHVGGLLSPPQPDE-VPDFPPLVRFEF------TPKEKADLVFAGLGWITV 333
Query: 510 RLKGEAALGVWTY--EGVDIVLRNALL 534
A + V Y +GVD++LR A +
Sbjct: 334 ----PAGVTVAGYAPKGVDVLLRRAFI 356
>gi|171780310|ref|ZP_02921214.1| hypothetical protein STRINF_02098 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|379705906|ref|YP_005204365.1| GTP-binding protein [Streptococcus infantarius subsp. infantarius
CJ18]
gi|171281658|gb|EDT47093.1| ribosome biogenesis GTPase YqeH [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|374682605|gb|AEZ62894.1| GTP-binding protein [Streptococcus infantarius subsp. infantarius
CJ18]
Length = 372
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 132/454 (29%), Positives = 205/454 (45%), Gaps = 88/454 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q + + GY P L K GL
Sbjct: 5 LCIGCGAKIQTEDKEQAGY--TPKAALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
ET E+ C RC LRHY ++ DV + D + L + ++V+
Sbjct: 34 ETGEL-------YCQRCFRLRHYNEITDVHIT--------DDEFLKLLHEVGDSDALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS +++ VS GN V+LV K D+LP S+ +
Sbjct: 79 VVDIFDFNGSVIPGLSRFVS---------------GN--DVLLVGNKKDILPKSVKTGKV 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + + SA + +K LI+ + L R +V+ +G N GKSTL
Sbjct: 122 TQWLTERAHEEGLRPVDVI-LTSAQNHQAIKDLIEKIEKLRKGR-DVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI K + EK+I+ T + PGTTL ++E L + +FDTPG++H +
Sbjct: 180 INAIIKEITG-------EKDII---TTSRFPGTTLD--KIEIPLDDGSYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L + K ++ KE+KP+TY++ ++ +AGL R D + T +
Sbjct: 228 QMAHYLGDKNLKYISPKKEIKPKTYQLNPEQTLFLAGLGRFDFISGDKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K A +KH G L PP +K + E K V EF + +D+ +
Sbjct: 286 LKLHRTKLAGADAFYDKHVGSLLIPP-SDKELAEFPKLVCHEFTI------KDKMDVVYS 338
Query: 503 GLGWFSVRLKGE--AALGVWTYEGVDIVLRNALL 534
GLGW ++ + + W EGV ++LR AL+
Sbjct: 339 GLGWIRIKASQDKPVKIAAWAPEGVAVLLRKALI 372
>gi|195978787|ref|YP_002124031.1| GTP-binding protein YqeH [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|195975492|gb|ACG63018.1| GTPase [Streptococcus equi subsp. zooepidemicus MGCS10565]
Length = 372
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 191/385 (49%), Gaps = 50/385 (12%)
Query: 152 KPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDG 211
+ V C RC LRHY + DV + D + L + ++V+ VVD DF+G
Sbjct: 36 REVYCQRCFRLRHYNDITDVHIT--------DDEFLKLLHEVGDSDALVVNVVDIFDFNG 87
Query: 212 SFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAR 271
S +++ V+ GN ++LV K D+LP S+ ++ W+ +RA
Sbjct: 88 SVIPGLSRFVA---------------GN--DILLVGNKKDILPKSVKDSKVTQWLTERAH 130
Query: 272 EDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVD 331
E+G+ + L SA + +K LI+ + L +R +V+ +G N GKSTL+NAI + +
Sbjct: 131 EEGLRPLDVL-LTSAQNKYAIKELIERIDQLRQRR-DVYVVGVTNVGKSTLINAIIQEIT 188
Query: 332 AGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTRE 391
+K+++ T + PGTTL ++E L + +FDTPG++H +Q+ L+ +
Sbjct: 189 G-------DKDVI---TTSRFPGTTLD--KIEIPLDDGSFIFDTPGIIHRHQMAHYLSAK 236
Query: 392 EQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTE 451
K ++ KE+KP+TY++ ++ + GL R D S E T + L LH K E
Sbjct: 237 NLKFISPKKEIKPKTYQLNPKQTLFLGGLARFDF--ISGERQGFTAYFDNQLLLHRTKLE 294
Query: 452 NACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRL 511
A +K G L PP ++ +++ + VR EF + +DI +GLGW V
Sbjct: 295 GADAFYDKQAGLLLTPP-DKQELDDFPRLVRHEFLL------DQKMDIVFSGLGWICVNA 347
Query: 512 KGEAALGV--WTYEGVDIVLRNALL 534
E A V W +GV +V+R A++
Sbjct: 348 NKETATKVAAWAPDGVAVVVRKAII 372
>gi|424993575|ref|ZP_18405561.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV168]
gi|402982222|gb|EJX97701.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV168]
Length = 369
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 206/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q P GY P L K GL E
Sbjct: 7 CIGCGAVIQTNKPGELGY--TPQTALEK----------------------GLASGE---- 38
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
V C RC LRHY + +DV+ L D DF +L++ G + ++++
Sbjct: 39 ----------VYCQRCFRLRHYNETQDVS----LTDDDF-----LRLLNELGQKDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + V D V+LV K+D+LP SL T+
Sbjct: 80 VVDIFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKVDILPKSLKKTKL 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+++RA E GI + L SA K+ + L++ + + R +V+ +G N GKSTL
Sbjct: 123 TQWMKERAYEAGIRPVDVL-LTSAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K+ AG + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIKNT-AG---------VQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ +++ KE+KP+ Y++ G ++ + GL R D + S + S
Sbjct: 229 QMAHYLGKKDLRIIAPLKEIKPKVYQLNEGQTLFLGGLARFDFISGNRASF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+ +H K E A +KH G LQPP ++ VE + VR EF V DI A
Sbjct: 287 VNIHRTKLEKADEFYQKHVGGLLQPPRPDE-VEAFPELVRFEFSV------KEKTDIVFA 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V + W +GVD++ R AL+
Sbjct: 340 GLGWITV--TAPVVIVGWAPKGVDVLKRKALI 369
>gi|421207182|ref|ZP_15664234.1| hypothetical protein AMCSP20_001750 [Streptococcus pneumoniae
2090008]
gi|421230360|ref|ZP_15687024.1| putative GTP-binding protein [Streptococcus pneumoniae 2061376]
gi|421292619|ref|ZP_15743353.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA56348]
gi|421312558|ref|ZP_15763160.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58981]
gi|395574518|gb|EJG35096.1| hypothetical protein AMCSP20_001750 [Streptococcus pneumoniae
2090008]
gi|395593886|gb|EJG54128.1| putative GTP-binding protein [Streptococcus pneumoniae 2061376]
gi|395891926|gb|EJH02920.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA56348]
gi|395909412|gb|EJH20288.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58981]
Length = 368
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 207/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV + N DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQLTN--DDF-------LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMKRAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ V+ F + + D+
Sbjct: 285 ELKLHRSKLEGASAFYDKHLGTLLTPP-NSKEKEDFPSLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|387626936|ref|YP_006063112.1| GTP-binding protein [Streptococcus pneumoniae INV104]
gi|444382383|ref|ZP_21180586.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS8106]
gi|444385619|ref|ZP_21183691.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS8203]
gi|301794722|emb|CBW37173.1| GTP-binding protein [Streptococcus pneumoniae INV104]
gi|444249689|gb|ELU56177.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS8203]
gi|444252657|gb|ELU59119.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS8106]
Length = 368
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 207/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV + N DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQLTN--DDF-------LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKST
Sbjct: 121 ISQWLMKRAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ + V+ F + + D+
Sbjct: 285 ELKLHRSKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV + R A++
Sbjct: 338 SGLGW--IRVTGTAKVAVWAPEGVAVATRKAII 368
>gi|424780547|ref|ZP_18207420.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Catellicoccus marimammalium M35/04/3]
gi|422842949|gb|EKU27396.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Catellicoccus marimammalium M35/04/3]
Length = 371
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 137/451 (30%), Positives = 206/451 (45%), Gaps = 87/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q + + GY P +L K +S
Sbjct: 8 CIGCGVPIQTEDKEGLGY--TPKSSLQKSEESG--------------------------- 38
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
K + C RC LRHY +++DV+ L D DF R L ++++ V
Sbjct: 39 --------KALYCQRCFRLRHYNEIQDVS----LTDDDF----LRLLNEIRTKDALIINV 82
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS + + + + D NE ++LV K DLLP SL R
Sbjct: 83 VDIFDFNGSIIKGLHRFIGD----NE-------------LLLVGNKRDLLPKSLKKGRLI 125
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+++RA E G+ + ++ SA K + L+ + + R +V+ +G N GKSTL+
Sbjct: 126 QWMKERAHEIGL-RPEEVLLTSAKKKEDVLELLSTIEEYRQGR-DVYIVGVTNVGKSTLI 183
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI ++ GEE S +T + PGTTL ++ + L + DTPG++H Q
Sbjct: 184 NAIIQA------AVGEE----SVITTSQFPGTTLDLIEIP--LDDGHYIIDTPGIIHREQ 231
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ + K + KELKP+TY++ AG ++ + GL R D E S V+ + L
Sbjct: 232 MAHYLSPNDLKAITPKKELKPKTYQLNAGQTLFLGGLARFDYLEGDKGSF--VVYTARDL 289
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A +KH G LQPP + L + VR EF +DI +G
Sbjct: 290 MIHRTKLEKADAFYQKHVGELLQPPTDLEHY-PLPELVRFEFTA------KEKMDIVFSG 342
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V KG G W +GV ++ R AL+
Sbjct: 343 LGWITVP-KGSKIAG-WAPKGVAVIRRKALI 371
>gi|418068958|ref|ZP_12706238.1| GTPase YqeH [Pediococcus acidilactici MA18/5M]
gi|357537691|gb|EHJ21714.1| GTPase YqeH [Pediococcus acidilactici MA18/5M]
Length = 369
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 201/452 (44%), Gaps = 91/452 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q + + PGY P+ L K L+ G L
Sbjct: 8 CIGCGATLQTEDAQLPGY--TPASALKK-----------------GLESGQLY------- 41
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLM 202
C RC LRHY ++ V++ D DF RKL+S S + S+V+
Sbjct: 42 ------------CQRCFRLRHYNEIAPVSIS----DDDF-----RKLLSQISDSDSLVVY 80
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + V D V+LV K D+ P S+ R
Sbjct: 81 VVDMFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKADVFPKSIKRHRM 123
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+RQ+A+ +GI + + SA + ++ L D + L R +V+ +G N GKSTL
Sbjct: 124 REWLRQQAKANGIEPVDVM-ITSAKQRPAVEQLFDKIEQLRDGR-DVYVVGVTNVGKSTL 181
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N++ A R G I +T + PGTTL R+E +K+ DTPG++H +
Sbjct: 182 INSLI----ALRNG------IKDVITTSRFPGTTLD--RIEIPFDDHSKMIDTPGIVHND 229
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ LT E+ K ++ K +KPR Y++ ++ L R D E S+ VT +
Sbjct: 230 QMAHVLTAEDLKYISPKKTIKPRVYQLGDEQTLFAGALARFDYENSTGS---VTAYFDNN 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K NA EKH G L PP E + L + R F + S D+
Sbjct: 287 LMIHRTKLANADHFYEKHAGELLTPPAAEN-LANLPELARHHFKIEEDS------DVVFE 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V + + W +G+ +V+R AL+
Sbjct: 340 GLGWIAV--PAGSVVTAWAPKGISVVIRWALI 369
>gi|377831709|ref|ZP_09814679.1| GTP-binding protein YqeH [Lactobacillus mucosae LM1]
gi|377554503|gb|EHT16212.1| GTP-binding protein YqeH [Lactobacillus mucosae LM1]
Length = 371
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 138/451 (30%), Positives = 202/451 (44%), Gaps = 87/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q T+P GY NS K GL E
Sbjct: 8 CIGCGAIIQTTDPDGLGYT------------------------PNSALKKGL-------E 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ V+ L D DF R L A ++++ V
Sbjct: 37 TGEL-------YCQRCFRLRHYNEIAPVS----LTDDDF----LRLLNHIRDAHALIVYV 81
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS + + V GN V+LV K D+LP SL +
Sbjct: 82 VDIFDFNGSLIPGLHRFV----------------GNDNPVLLVGNKEDVLPRSLRRRKLT 125
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ+A G+ I L VSA KN + L+ ++ R +V+ +G N GKSTL+
Sbjct: 126 DWLRQQANLAGLRPIDTL-LVSAKKNHQIDQLLAEIEKHRADR-DVYVVGVTNVGKSTLI 183
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI K ++ + +T + PGTTL ++E L KL DTPG++H Q
Sbjct: 184 NAIIK----------QQTGVQDLITTSRFPGTTLD--KIEIPLDDGHKLVDTPGIIHQEQ 231
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ ++ K+V KE+KPRT+++ +I + G+ R D + I + L
Sbjct: 232 MAHVLSAKDLKIVAPQKEIKPRTFQLNDSQTIFLGGVARFDYVKGPHAGI--VAYFENSL 289
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
PLH K NA KH G L PP ++ + + R EF + S D+ G
Sbjct: 290 PLHRTKLVNADEFYAKHCGDLLTPPTSDE-MADFPPLERHEFAIKEKS------DLVFEG 342
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V G G W +GVD+++R A++
Sbjct: 343 LGWITVP-AGTTVAG-WAPKGVDVLVRRAMI 371
>gi|422809570|ref|ZP_16857981.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Listeria monocytogenes FSL J1-208]
gi|378753184|gb|EHY63769.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Listeria monocytogenes FSL J1-208]
Length = 366
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 206/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY P +LN NE
Sbjct: 7 CIGCGAIIQTEDPDKIGY--APKSSLN-----------NEQ------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L+HY +++DV L D DF R L S +++++ V
Sbjct: 35 ----------VICKRCFRLKHYNEIQDVA----LTDDDF----LRILNQISSKQALIVYV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS+ + + +G+ P V+LV K D+LP SL +
Sbjct: 77 VDIFDFDGSWLPGLPRF----------------AGSNP-VLLVGNKEDVLPKSLKRDKLT 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R RA+E G++ T + VSA K G +L++ + +L + +V+ +G N GKSTL+
Sbjct: 120 RWMRTRAKEQGLAA-TDVVLVSAEKGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K E N++ T + PGTTL ++E L L DTPG+++ +Q
Sbjct: 178 NRIIKQASG-------ENNVI---TTSQFPGTTLD--KIEIPLADGNVLVDTPGIINHHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + K + KE+KP +++ ++ + L R+D +S+ V+ S L
Sbjct: 226 MAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + EK G LQPP E+ +E L K V F + DI +G
Sbjct: 284 PIHRTKLEKADALYEKQAGIVLQPPT-EEGMETLPKLVPYSFTI------KEKADIVFSG 336
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW ++ +G A + W EGV +R +L+
Sbjct: 337 LGWVTIP-EGGAKVTAWVPEGVSATIRTSLV 366
>gi|389856062|ref|YP_006358305.1| GTP-binding protein YqeH [Streptococcus suis ST1]
gi|353739780|gb|AER20787.1| GTP-binding protein YqeH [Streptococcus suis ST1]
Length = 368
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 194/382 (50%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
+ C RC LRHY ++ DV + D DF KL+ + G + ++V+ V+D DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVNIS----DDDF-----LKLLHSVGESDALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + +S GN V+LV K D+LP S+ + W+ +RA E
Sbjct: 89 VIPGLPRFIS---------------GN--DVLLVGNKQDILPKSVKTGKVTQWLTERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + + SA +K LI+ + + K +V+ +G N GKSTL+NAI + +
Sbjct: 132 IGMRPVDVV-LTSAQNKQAIKDLIEKI-EQHRKGRDVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
+K+++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DKDVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K ++ KE+KP+TY++ ++ +AGL R D + T + L LH K +
Sbjct: 238 LKYISPRKEIKPKTYQLNPEQTLFLAGLGRFDFVAGERQGF--TAFFDNELQLHRTKLQG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K ++E + VR EF + + D+ +GLGW +R+
Sbjct: 296 ASEFYQKHAGSLLVPPT-SKELKEFPELVRHEFTI------NEKTDVVFSGLGW--IRVN 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
+A + W +GVD+V+R A++
Sbjct: 347 EKAKIAAWAPKGVDVVIRKAII 368
>gi|403668289|ref|ZP_10933564.1| GTPase YqeH [Kurthia sp. JC8E]
Length = 367
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 212/452 (46%), Gaps = 92/452 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q +PK PG+ P+ L K
Sbjct: 7 CIGCGTQIQTEDPKAPGF--APASALEK-------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ ++C RC L++Y +++ V+ L D DF R L + +++ +
Sbjct: 33 --------EEIICKRCFRLKNYNELQPVS----LTDDDF----LRILNGLGTQKGLIVKI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF GS+ + + V GN P V+L+ K+DLLP S++P +
Sbjct: 77 VDIFDFTGSWLPGLHRFV----------------GNNP-VLLIANKVDLLPKSINPKKVI 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG-NVWAIGAQNAGKSTL 322
+W+RQ A++ G+ + L VSA K G++ ++ + + +RG +V+ +G N GKST
Sbjct: 120 NWIRQEAKQLGLKPVDVL-LVSAHKGNGIEEAMEKIEEY--RRGEDVYVVGCTNVGKSTF 176
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K G+G +T + PGTTL ++ + L + ++DTPG+++ +
Sbjct: 177 INRIIKQA-TGQG---------DVITTSYFPGTTLDMIEIP--LDDEKAIYDTPGIINHH 224
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ + +E K + KE+KP+T+++ A ++ I L R D + + TV +
Sbjct: 225 QMAHHIDAKELKYIMPKKEIKPKTFQLNAEQTLFIGALARFDFIQGHRSNF--TVHIAND 282
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K ENA + E H G L PP E +++L VR EF S +DI +
Sbjct: 283 LNIHRTKLENADELYETHKGELLAPPTKE-FIDQLPPLVRHEF-----SIKEDKIDIVYS 336
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V+ + + EGV++ +R +L+
Sbjct: 337 GLGWITVQ-NANVVVAAYAPEGVEVTIRPSLI 367
>gi|386726062|ref|YP_006192388.1| hypothetical protein B2K_28655 [Paenibacillus mucilaginosus K02]
gi|384093187|gb|AFH64623.1| hypothetical protein B2K_28655 [Paenibacillus mucilaginosus K02]
Length = 368
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 208/452 (46%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q NP G+ P Q L++
Sbjct: 6 CAGCGVALQQENPDQLGFV--PEQALSRT------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
PV+C RC +++Y + +T+ DF KL+ G S+V+
Sbjct: 33 ---------PVICQRCFRIKNYNEASGITLNQ--DDF-------LKLLGHVGTTDSLVVN 74
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
+VD DF+GS +A+ V GN P ++LVV KIDLLP + R
Sbjct: 75 IVDLFDFEGSMISGLARFV----------------GNNP-IILVVNKIDLLPKVTNYNRI 117
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+WV+++A+E G+ K+ + SA KN G + +I+ +D K +++ +GA N GKSTL
Sbjct: 118 LNWVQRQAKEAGL-KVADIVLCSARKNMGFERVIE-ALDEHRKGRDIYVVGATNVGKSTL 175
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N + + ++ + LT + PGTTL +VR+ L + DTPG+++ +
Sbjct: 176 INRLIH----------DYSDLDAELTVSQYPGTTLDLVRIP--LDDGGSIIDTPGIVYKH 223
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
++T + +++ V +K +KP +++ +G S++ L R D + +S T + S
Sbjct: 224 RLTELVNKKDLMKVMPDKPMKPLVFQLNSGQSVYFGALARFDFLQGERQSF--TFYVSNS 281
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L H K E A + E H G LQPP+ E ++EL K + + ++D++ +
Sbjct: 282 LEAHRTKLEKADELYENHKGVLLQPPVLEN-LDELPKLTKHAIRIP----KGGNLDVSIS 336
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW A L + GV + +R +L+
Sbjct: 337 GLGWVKANGVQGAELAIHVPRGVKVAVRESLI 368
>gi|254852115|ref|ZP_05241463.1| GTP-binding protein YqeH [Listeria monocytogenes FSL R2-503]
gi|300764844|ref|ZP_07074834.1| GTPase [Listeria monocytogenes FSL N1-017]
gi|404281049|ref|YP_006681947.1| GTPase [Listeria monocytogenes SLCC2755]
gi|404286913|ref|YP_006693499.1| GTPase [Listeria monocytogenes serotype 7 str. SLCC2482]
gi|258605417|gb|EEW18025.1| GTP-binding protein YqeH [Listeria monocytogenes FSL R2-503]
gi|300514520|gb|EFK41577.1| GTPase [Listeria monocytogenes FSL N1-017]
gi|404227684|emb|CBY49089.1| putative GTPase [Listeria monocytogenes SLCC2755]
gi|404245842|emb|CBY04067.1| GTPase, putative [Listeria monocytogenes serotype 7 str. SLCC2482]
Length = 366
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 207/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY P +LN NE
Sbjct: 7 CIGCGAVIQTEDPDKIGY--APKSSLN-----------NEQ------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L+HY +++DV L D DF R L S +++++ V
Sbjct: 35 ----------VICKRCFRLKHYNEIQDVA----LTDDDF----LRILNQISSKQALIVYV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS+ + + +G+ P V+LV K D+LP SL+ +
Sbjct: 77 VDIFDFDGSWLPGLPRF----------------AGSNP-VLLVGNKEDVLPKSLNRDKLT 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R RA+E G++ T + VSA K G +L++ + +L + +V+ +G N GKSTL+
Sbjct: 120 RWMRTRAKEQGLAA-TDVVLVSAEKGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K E N++ T + PGTTL ++E L L DTPG+++ +Q
Sbjct: 178 NRIIKQASG-------ENNVI---TTSQFPGTTLD--KIEIPLADGNVLVDTPGIINHHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + K + KE+KP +++ ++ + L R+D +S+ V+ S L
Sbjct: 226 MAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + EK G LQPP E+ +E L K V F + DI +G
Sbjct: 284 PIHRTKLEKADALYEKQAGIVLQPPT-EEGMETLPKLVPYSFTI------KEKADIVFSG 336
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW ++ +G A + W EGV +R +L+
Sbjct: 337 LGWVTIP-EGGAKVTAWVPEGVSATIRTSLV 366
>gi|146320205|ref|YP_001199916.1| GTP-binding protein YqeH [Streptococcus suis 98HAH33]
gi|253751231|ref|YP_003024372.1| GTP-binding protein YqeH [Streptococcus suis SC84]
gi|253753132|ref|YP_003026272.1| GTP-binding protein YqeH [Streptococcus suis P1/7]
gi|253754955|ref|YP_003028095.1| GTP-binding protein YqeH [Streptococcus suis BM407]
gi|330832202|ref|YP_004401027.1| GTP-binding protein YqeH [Streptococcus suis ST3]
gi|386577334|ref|YP_006073739.1| GTP-binding protein [Streptococcus suis GZ1]
gi|386579314|ref|YP_006075719.1| GTP-binding protein YqeH [Streptococcus suis JS14]
gi|386581378|ref|YP_006077782.1| GTP-binding protein YqeH [Streptococcus suis SS12]
gi|386583488|ref|YP_006079891.1| GTP-binding protein YqeH [Streptococcus suis D9]
gi|386587609|ref|YP_006084010.1| GTP-binding protein YqeH [Streptococcus suis A7]
gi|145691011|gb|ABP91516.1| Predicted GTPase [Streptococcus suis 98HAH33]
gi|251815520|emb|CAZ51100.1| GTP-binding protein [Streptococcus suis SC84]
gi|251817419|emb|CAZ55157.1| GTP-binding protein [Streptococcus suis BM407]
gi|251819377|emb|CAR44789.1| GTP-binding protein [Streptococcus suis P1/7]
gi|292557796|gb|ADE30797.1| GTP-binding protein [Streptococcus suis GZ1]
gi|319757506|gb|ADV69448.1| GTP-binding protein YqeH [Streptococcus suis JS14]
gi|329306425|gb|AEB80841.1| GTP-binding protein YqeH [Streptococcus suis ST3]
gi|353733524|gb|AER14534.1| GTP-binding protein YqeH [Streptococcus suis SS12]
gi|353735634|gb|AER16643.1| GTP-binding protein YqeH [Streptococcus suis D9]
gi|354984770|gb|AER43668.1| GTP-binding protein YqeH [Streptococcus suis A7]
Length = 368
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 194/382 (50%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
+ C RC LRHY ++ DV + D DF KL+ + G + ++V+ V+D DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVNIS----DDDF-----LKLLHSVGESDALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + +S GN V+LV K D+LP S+ + W+ +RA E
Sbjct: 89 VIPGLPRFIS---------------GN--DVLLVGNKQDILPKSVKTGKVTQWLTERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + + SA +K LI+ + + K +V+ +G N GKSTL+NAI + +
Sbjct: 132 IGMRPVDVV-LTSAQNKQAIKDLIEKI-EQHRKGRDVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
+K+++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DKDVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K ++ KE+KP+TY++ ++ +AGL R D + T + L LH K +
Sbjct: 238 LKYISPRKEIKPKTYQLNPEQTLFLAGLGRFDFVAGERQGF--TAFFDNELQLHRTKLQG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K ++E + VR EF + + D+ +GLGW +R+
Sbjct: 296 ASEFYQKHAGSLLVPPT-SKELKEFPELVRHEFTI------NEKTDVVFSGLGW--IRVN 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
+A + W +GVD+V+R A++
Sbjct: 347 EKAKIAAWAPKGVDVVIRKAII 368
>gi|422409721|ref|ZP_16486682.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes FSL F2-208]
gi|313608710|gb|EFR84539.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes FSL F2-208]
Length = 371
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 206/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY P +LN NE
Sbjct: 12 CIGCGAIIQTEDPDKIGY--APKSSLN-----------NEQ------------------- 39
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L+HY +++DV L D DF R L S +++++ V
Sbjct: 40 ----------VICKRCFRLKHYNEIQDVA----LTDDDF----LRILNQISSKQALIVYV 81
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS+ + + +G+ P V+LV K D+LP SL +
Sbjct: 82 VDIFDFDGSWLPGLPRF----------------AGSNP-VLLVGNKEDVLPKSLKRDKLT 124
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R RA+E G++ T + VSA K G +L++ + +L + +V+ +G N GKSTL+
Sbjct: 125 RWMRTRAKEQGLAA-TDVVLVSAEKGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLI 182
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K E N++ T + PGTTL ++E L L DTPG+++ +Q
Sbjct: 183 NRIIKQASG-------ENNVI---TTSQFPGTTLD--KIEIPLADGNVLVDTPGIINHHQ 230
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + K + KE+KP +++ ++ + L R+D +S+ V+ S L
Sbjct: 231 MAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNL 288
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + EK G LQPP E+ +E L K V F + DI +G
Sbjct: 289 PIHRTKLEKADALYEKQAGIVLQPPT-EEGMETLPKLVPYSFTI------KEKADIVFSG 341
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW ++ +G A + W EGV +R +L+
Sbjct: 342 LGWVTIP-EGGAKVTAWVPEGVSATIRTSLV 371
>gi|398818043|ref|ZP_10576642.1| ribosome biogenesis GTPase YqeH [Brevibacillus sp. BC25]
gi|398028841|gb|EJL22344.1| ribosome biogenesis GTPase YqeH [Brevibacillus sp. BC25]
Length = 373
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 212/452 (46%), Gaps = 88/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ +Q + K PGY A ES
Sbjct: 9 CAGCGIAIQTADAKKPGY-------------------APESALG---------------- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGA-RSVVLM 202
K V+C RC+ ++HY +V V + D DF K++ G+ +++V+M
Sbjct: 34 -------RKVVICQRCYRIKHYNEVAPVG----MGDDDF-----LKILDGIGSTQALVVM 77
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF GS+ + + + V G P ++LV K+DLLP +++ R
Sbjct: 78 VVDIFDFQGSWLKGLPRFV----------------GKNP-ILLVGNKVDLLPKNINLNRV 120
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+W++ A+E G+ + + +SA K + L++ + +L R +V+ +G N GKST+
Sbjct: 121 RNWMQHEAKERGL-RPEDVVLISAQKGLHIDELLNRIGELRKGR-DVYIVGVTNVGKSTM 178
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I A +T +P PGTTL ++E L +FDTPG+++ +
Sbjct: 179 INRILHDYGAAE----------LEITTSPFPGTTLD--KIEIPLEDGRSIFDTPGIINRD 226
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
QI ++ + + + + + Y++ G S+ + GL R+D + + V+A
Sbjct: 227 QIGHMVSPTDLRKITPTSRINSKVYQLDDGQSLFLGGLARIDFVRGERQPL--IVYADND 284
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K E A ++EKH G L PP GE+ + L +V+ F ++ S+ + DI +
Sbjct: 285 LYIHRTKLEKADEVMEKHHGTLLVPPTGEEAAKALPPFVKHTFKINKSTM---TTDIVIS 341
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW S++ K EA++ V +GV + +R L+
Sbjct: 342 GLGWVSIQGKHEASVVVHAPKGVSVGMRKGLI 373
>gi|386585533|ref|YP_006081935.1| GTP-binding protein YqeH [Streptococcus suis D12]
gi|353737679|gb|AER18687.1| GTP-binding protein YqeH [Streptococcus suis D12]
Length = 368
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 194/382 (50%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
+ C RC LRHY ++ DV + D DF KL+ + G + ++V+ V+D DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVNIS----DDDF-----LKLLHSVGESDALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + +S GN V+LV K D+LP S+ + W+ +RA E
Sbjct: 89 VIPGLPRFIS---------------GN--DVLLVGNKQDILPKSVKTGKVTQWLTERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + + SA +K LI+ + + K +V+ +G N GKSTL+NAI + +
Sbjct: 132 IGMRPVDVV-LTSAQNKQAIKDLIEKI-EQHRKGRDVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
+K+++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DKDVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K ++ KE+KP+TY++ ++ +AGL R D + T + L LH K +
Sbjct: 238 LKYISPRKEIKPKTYQLNPEQTLFLAGLGRFDFVAGERQGF--TAFFDNELQLHRTKLQG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K ++E + VR EF + + D+ +GLGW +R+
Sbjct: 296 ASEFYQKHAGTLLVPPT-SKELKEFPELVRHEFTI------NEKTDVVFSGLGW--IRVN 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
+A + W +GVD+V+R A++
Sbjct: 347 EKAKIAAWAPKGVDVVIRKAII 368
>gi|227513534|ref|ZP_03943583.1| GTP-binding protein [Lactobacillus buchneri ATCC 11577]
gi|227083407|gb|EEI18719.1| GTP-binding protein [Lactobacillus buchneri ATCC 11577]
Length = 378
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 180/381 (47%), Gaps = 49/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V C RC LRHY ++ V+ L D DF + L S SG S+++ VVD D +GS
Sbjct: 47 VYCQRCFRLRHYNEIAPVS----LSDDDF----LKLLTSISGTDSLIVYVVDIFDVNGSL 98
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V D V+LV K+D+LP+S+ + W+RQRA
Sbjct: 99 IPGLHRFVGDNP-----------------VLLVGNKLDVLPASIKERKVRDWLRQRANSA 141
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
GI I + +SA N+ + L+D + + +V+ +G N GKSTL+NA+ +
Sbjct: 142 GIRPI-DVELISAKTNFDVDHLLDQIEKYRDGK-DVYVVGVTNVGKSTLINAVIR----- 194
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
+ I +T + PGTTL R++ L + DTPG++ P Q+ L +E
Sbjct: 195 -----QSTGIKELITTSRFPGTTLD--RIDIPLNDGHSIVDTPGIIQPEQMAHHLVGKEL 247
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
LV K +KP+ Y++ ++ G+ R D + + + TV+A L +H K ENA
Sbjct: 248 NLVTPQKTIKPKIYQLNPEQTLFFGGVARFDYDSGDGKHGF-TVYAENNLYIHRTKLENA 306
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
EKH G L PP E R ++ EF S S D+ GLGW +V
Sbjct: 307 EAFYEKHLGDLLSPP-SENRKDDFPPLEHHEFKTSQKS------DVVIEGLGWVTV--PS 357
Query: 514 EAALGVWTYEGVDIVLRNALL 534
+ + W +GV +++R A++
Sbjct: 358 DVVVSGWAPKGVSVLIRPAMI 378
>gi|295425298|ref|ZP_06818001.1| ribosome biogenesis GTPase YqeH [Lactobacillus amylolyticus DSM
11664]
gi|295065074|gb|EFG55979.1| ribosome biogenesis GTPase YqeH [Lactobacillus amylolyticus DSM
11664]
Length = 369
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 208/452 (46%), Gaps = 88/452 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG ++Q +PK GY P+ L K E +N
Sbjct: 6 ICIGCGAVLQSDDPKKAGYL--PAAALKKAEAG-----------------------ETDN 40
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
V C RC LRHY ++ V + N DF L S + +++V+
Sbjct: 41 -----------VYCQRCFRLRHYNEIMPVDLNN--DDF------LALLNSLATKKALVVN 81
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF S + + V D NE +LV K DL P + +R
Sbjct: 82 VVDLFDFSNSLLASLKRFVGD----NE-------------FILVGNKFDLFPLNSRQSRI 124
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+RQ A G+ +K+ +SA + L LI+ +D A + +++ +G N GKSTL
Sbjct: 125 KDWMRQEANRMGLYP-SKIFLISAARQKNLDELIE-YLDQASQDRDIYFVGMTNVGKSTL 182
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + G+ K+++ T + PGTTL R+E L L DTPG++ N
Sbjct: 183 INAIIDKM-------GDIKDVI---TTSRFPGTTLD--RIEIPLENGHHLIDTPGIMSTN 230
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ TRL + ++V+ K +KP T+++ G++I + GL R+D + +S TV+A+
Sbjct: 231 QLATRLNAADLEVVSPKKPIKPATFQLLPGNTIFLGGLGRIDYLKG--QSTSFTVYAARG 288
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+ LH KT NA +KH G L PP GE + L +E+H S D+
Sbjct: 289 VKLHRTKTANADDFYQKHVGELLTPPTGENYLPALKG---QEYHTDYKS------DLLFG 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
G+G+ +V + + +T + + + +R AL+
Sbjct: 340 GVGFVTV--PKDCVVKTYTPDKIGLGIRRALI 369
>gi|46907719|ref|YP_014108.1| GTP-binding protein YqeH [Listeria monocytogenes serotype 4b str.
F2365]
gi|217964363|ref|YP_002350041.1| GTP-binding protein YqeH [Listeria monocytogenes HCC23]
gi|226224092|ref|YP_002758199.1| hypothetical protein Lm4b_01501b [Listeria monocytogenes serotype
4b str. CLIP 80459]
gi|254931426|ref|ZP_05264785.1| GTP-binding protein YqeH [Listeria monocytogenes HPB2262]
gi|290893851|ref|ZP_06556829.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J2-071]
gi|386008262|ref|YP_005926540.1| GTPase, putative [Listeria monocytogenes L99]
gi|386026863|ref|YP_005947639.1| putative ribosome biogenesis GTP-binding protein [Listeria
monocytogenes M7]
gi|386732230|ref|YP_006205726.1| GTPase YqeH [Listeria monocytogenes 07PF0776]
gi|404407929|ref|YP_006690644.1| GTPase [Listeria monocytogenes SLCC2376]
gi|405749835|ref|YP_006673301.1| GTPase [Listeria monocytogenes ATCC 19117]
gi|405752711|ref|YP_006676176.1| GTPase [Listeria monocytogenes SLCC2378]
gi|405755649|ref|YP_006679113.1| GTPase [Listeria monocytogenes SLCC2540]
gi|406704264|ref|YP_006754618.1| GTPase, putative [Listeria monocytogenes L312]
gi|417316034|ref|ZP_12102692.1| GTPase YqeH [Listeria monocytogenes J1816]
gi|417317609|ref|ZP_12104221.1| GTPase YqeH [Listeria monocytogenes J1-220]
gi|424823253|ref|ZP_18248266.1| GTP-binding protein [Listeria monocytogenes str. Scott A]
gi|46880988|gb|AAT04285.1| putative GTPase [Listeria monocytogenes serotype 4b str. F2365]
gi|217333633|gb|ACK39427.1| GTPase family protein [Listeria monocytogenes HCC23]
gi|225876554|emb|CAS05263.1| Hypothetical protein of unknown function [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|290556568|gb|EFD90104.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J2-071]
gi|293582976|gb|EFF95008.1| GTP-binding protein YqeH [Listeria monocytogenes HPB2262]
gi|307571072|emb|CAR84251.1| GTPase, putative [Listeria monocytogenes L99]
gi|328465531|gb|EGF36760.1| GTPase YqeH [Listeria monocytogenes J1816]
gi|328474857|gb|EGF45657.1| GTPase YqeH [Listeria monocytogenes J1-220]
gi|332311933|gb|EGJ25028.1| GTP-binding protein [Listeria monocytogenes str. Scott A]
gi|336023444|gb|AEH92581.1| putative ribosome biogenesis GTP-binding protein [Listeria
monocytogenes M7]
gi|384390988|gb|AFH80058.1| GTPase YqeH [Listeria monocytogenes 07PF0776]
gi|404219035|emb|CBY70399.1| GTPase, putative [Listeria monocytogenes ATCC 19117]
gi|404221911|emb|CBY73274.1| putative GTPase [Listeria monocytogenes SLCC2378]
gi|404224849|emb|CBY76211.1| putative GTPase [Listeria monocytogenes SLCC2540]
gi|404242078|emb|CBY63478.1| putative GTPase [Listeria monocytogenes SLCC2376]
gi|406361294|emb|CBY67567.1| GTPase, putative [Listeria monocytogenes L312]
Length = 366
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 206/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY P +LN NE
Sbjct: 7 CIGCGAVIQTEDPDKIGY--APKSSLN-----------NEQ------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L+HY +++DV L D DF R L S +++++ V
Sbjct: 35 ----------VICKRCFRLKHYNEIQDVA----LTDDDF----LRILNQISSKQALIVYV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS+ + + +G+ P V+LV K D+LP SL +
Sbjct: 77 VDIFDFDGSWLPGLPRF----------------AGSNP-VLLVGNKEDVLPKSLKRDKLT 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R RA+E G++ T + VSA K G +L++ + +L + +V+ +G N GKSTL+
Sbjct: 120 RWMRTRAKEQGLAA-TDVVLVSAEKGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K E N++ T + PGTTL ++E L L DTPG+++ +Q
Sbjct: 178 NRIIKQASG-------ENNVI---TTSQFPGTTLD--KIEIPLADGNVLVDTPGIINHHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + K + KE+KP +++ ++ + L R+D +S+ V+ S L
Sbjct: 226 MAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + EK G LQPP E+ +E L K V F + DI +G
Sbjct: 284 PIHRTKLEKADALYEKQAGIVLQPPT-EEGMETLPKLVPYSFTI------KEKADIVFSG 336
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW ++ +G A + W EGV +R +L+
Sbjct: 337 LGWVTIP-EGGAKVTAWVPEGVSATIRTSLV 366
>gi|315222440|ref|ZP_07864341.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus F0211]
gi|315188464|gb|EFU22178.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus F0211]
Length = 368
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 187/385 (48%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEITDVQ----LTDDDF----LRLLHEVGDSNALVVNVVDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ ++ W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKTSKVAQWLTER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LI+ + R +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKELIEKIEQYRKGR-DVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ GD E +T + PGTTL ++E L + ++DTPG++H +Q+ L+
Sbjct: 187 IT----GDKE------IITTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLS 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVSGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
A EKH G L PP +K V + + V+ E + + D+ +GLGW +
Sbjct: 293 LAGAGEFYEKHVGSLLTPP-SKKEVSDFPQLVKHELKIEAKT------DVVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W +GV +V+R A++
Sbjct: 344 RVTGPAKIAAWAPDGVAVVIRKAII 368
>gi|47093412|ref|ZP_00231177.1| GTPase, putative [Listeria monocytogenes str. 4b H7858]
gi|424714366|ref|YP_007015081.1| Uncharacterized protein yqeH [Listeria monocytogenes serotype 4b
str. LL195]
gi|47018191|gb|EAL08959.1| GTPase, putative [Listeria monocytogenes str. 4b H7858]
gi|424013550|emb|CCO64090.1| Uncharacterized protein yqeH [Listeria monocytogenes serotype 4b
str. LL195]
Length = 371
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 206/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY P +LN NE
Sbjct: 12 CIGCGAVIQTEDPDKIGY--APKSSLN-----------NEQ------------------- 39
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L+HY +++DV L D DF R L S +++++ V
Sbjct: 40 ----------VICKRCFRLKHYNEIQDVA----LTDDDF----LRILNQISSKQALIVYV 81
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS+ + + +G+ P V+LV K D+LP SL +
Sbjct: 82 VDIFDFDGSWLPGLPRF----------------AGSNP-VLLVGNKEDVLPKSLKRDKLT 124
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R RA+E G++ T + VSA K G +L++ + +L + +V+ +G N GKSTL+
Sbjct: 125 RWMRTRAKEQGLAA-TDVVLVSAEKGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLI 182
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K E N++ T + PGTTL ++E L L DTPG+++ +Q
Sbjct: 183 NRIIKQASG-------ENNVI---TTSQFPGTTLD--KIEIPLADGNVLVDTPGIINHHQ 230
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + K + KE+KP +++ ++ + L R+D +S+ V+ S L
Sbjct: 231 MAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNL 288
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + EK G LQPP E+ +E L K V F + DI +G
Sbjct: 289 PIHRTKLEKADALYEKQAGIVLQPPT-EEGMETLPKLVPYSFTI------KEKADIVFSG 341
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW ++ +G A + W EGV +R +L+
Sbjct: 342 LGWVTIP-EGGAKVTAWVPEGVSATIRTSLV 371
>gi|347548874|ref|YP_004855202.1| hypothetical protein LIV_1447 [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346981945|emb|CBW85930.1| Putative unknown protein [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 366
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 206/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY P +LN NE
Sbjct: 7 CIGCGAIIQTEDPDKIGY--APKSSLN-----------NEQ------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L+HY +++DV L D DF R L S +++++ V
Sbjct: 35 ----------VICKRCFRLKHYNEIQDVA----LTDDDF----LRILNQISSKQALIVYV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS+ + + +GN P V+LV K D+LP SL +
Sbjct: 77 VDIFDFDGSWLPGLPRF----------------AGNNP-VLLVGNKEDVLPKSLKRDKLT 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R RA+E G+S T + VSA + G +L++ + +L + +V+ +G N GKSTL+
Sbjct: 120 RWMRTRAKEQGLSA-TDVVLVSAERGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K E N++ T + PGTTL ++E L L DTPG+++ +Q
Sbjct: 178 NRIIKQASG-------ENNVI---TTSQFPGTTLD--KIEIPLADGNVLVDTPGIINHHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + K + KE+KP +++ ++ + L R+D +S+ V+ S L
Sbjct: 226 MAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K A + EK G LQPP E+ ++ L K V F+V DI +G
Sbjct: 284 PIHRTKLGKADALYEKQAGLVLQPPT-EEGMKTLPKLVPYTFNV------KEKADIVFSG 336
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW ++ +G A + W EGV +R +L+
Sbjct: 337 LGWVTIP-EGGAKITAWVPEGVSATIRTSLV 366
>gi|406837396|ref|ZP_11096990.1| GTPase YqeH [Lactobacillus vini DSM 20605]
Length = 371
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 187/381 (49%), Gaps = 50/381 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
+ C RC LRHY +++ V++ N DF + R S ++V+ V+D D DGS
Sbjct: 41 IYCQRCFRLRHYNEIEPVSLTN----DDFLKVLSR----ISQQSALVVNVIDIFDVDGSL 92
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + + D +LV K DLLP SL + + W+RQ+A
Sbjct: 93 LPALHRFIGDNP-----------------YILVGNKEDLLPKSLKRAKIKDWLRQQANHF 135
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ + + +SA KN G+ L++ + R +V+ +G N GKSTL+N + +
Sbjct: 136 GLKPLAVV-LLSAEKNRGIDELLEQINKYRQTR-DVYFVGVTNVGKSTLINHLLQ----- 188
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
+ I + +T + PGTTL +++ L L DTPG++ NQI RLT +E
Sbjct: 189 -----QAAGIKNLITVSRFPGTTLDFIKLP--LTDGGNLIDTPGIIQSNQIIHRLTTKEM 241
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
KL+ KELKP+ Y++ AG ++ + GL R+D + S +S+ ++ + L +H KTENA
Sbjct: 242 KLIQPIKELKPKVYQLGAGQTLLLGGLARIDYLKCSKKSM--ILYLAGQLKVHRTKTENA 299
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+++H G LQPP E + + HV + S D+ +GLGW V +
Sbjct: 300 EHFIDRHLGGLLQPPFKENA----ASFRNLQRHVFKTQQKS---DLVFSGLGW--VTIPA 350
Query: 514 EAALGVWTYEGVDIVLRNALL 534
A + W + + +R A++
Sbjct: 351 GATVAAWVPKETGVTIRKAMI 371
>gi|421489789|ref|ZP_15937165.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus SK1138]
gi|400374377|gb|EJP27296.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus SK1138]
Length = 368
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 186/385 (48%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEITDVQ----LTDDDF----LRLLHEVGDSNALVVNVVDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ ++ W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKTSKVAQWLTER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LI+ + R +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKELIEKIEQYRKGR-DVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ GD E +T + PGTTL ++E L + ++DTPG++H +QI L+
Sbjct: 187 IT----GDKE------IITTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQIAHYLS 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K V+ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFVSGDKQGF--TAYFDNELKLHRSK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
A EKH G L PP +K V + + V+ E + + D+ +GLGW +
Sbjct: 293 LLGAGEFYEKHVGSLLAPP-SKKEVADFPQLVKHELKI------ETKTDVVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W EGV +V R A++
Sbjct: 344 RVTGPAKIVAWAPEGVAVVTRKAII 368
>gi|423069216|ref|ZP_17058003.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius F0395]
gi|355365104|gb|EHG12830.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius F0395]
Length = 368
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 187/385 (48%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEITDVQ----LTDDDFL----RLLHEVGDSNALVVNVVDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ + W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKSNKVTQWLTER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ I + SA +K L++ + R +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPIDVV-LTSAQNKQAIKELMEKIEQYRKGR-DVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ GD E +T + PGTTL ++E L + ++DTPG++H +Q+ L+
Sbjct: 187 IT----GDKEV------ITTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLS 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K ++ KE+KP+TY++ ++ + GL R D + + T + L LH +
Sbjct: 235 AKNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVSGNKQGF--TAYFDNELKLHRTR 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
A EKH G L PP +K V + + V+ E + + D+ +GLGW +
Sbjct: 293 LAGAGEFYEKHVGSLLTPP-SKKEVSDFPQLVKHELKIEAKT------DVVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W EGV +V+R A++
Sbjct: 344 RVTGPAKIAAWAPEGVAVVIRKAII 368
>gi|403061018|ref|YP_006649234.1| GTPase YqeH [Streptococcus suis S735]
gi|402808344|gb|AFQ99835.1| GTPase YqeH [Streptococcus suis S735]
Length = 368
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 194/382 (50%), Gaps = 52/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
+ C RC LRHY ++ DV + D DF KL+ + G + ++V+ V+D DF+GS
Sbjct: 38 LYCQRCFRLRHYNEISDVNIS----DDDF-----LKLLHSVGESDALVVNVIDIFDFNGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + +S GN V+LV K D+LP S+ + W+ +RA E
Sbjct: 89 VIPGLPRFIS---------------GN--DVLLVGNKQDILPKSVKTGKVTQWLTERAHE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + + SA +K LI+ + + K +V+ +G N GKSTL+NAI + +
Sbjct: 132 IGMRPVDVV-LTSAQNKQAIKDLIEKI-EQHRKGRDVYVVGVTNVGKSTLINAIIQEITG 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
+K+++ T + PGTTL ++E L + ++DTPG++H +Q+ LT +
Sbjct: 190 -------DKDVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHYLTAKN 237
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K ++ KE+KP+TY++ ++ +AGL R D + T + L LH K +
Sbjct: 238 LKYISPRKEIKPKTYQLNPEQTLFLAGLGRFDFVAGERKGF--TAFFDNELQLHRTKLQG 295
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A +KH G L PP K ++E + VR EF + + D+ +GLGW +R+
Sbjct: 296 ASEFYQKHAGSLLVPPT-SKELKEFPELVRHEFTI------NEKTDVVFSGLGW--IRVN 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
+A + W +GVD+V+R A++
Sbjct: 347 EKAKIAAWAPKGVDVVIRKAII 368
>gi|325569902|ref|ZP_08145896.1| GTP-binding protein [Enterococcus casseliflavus ATCC 12755]
gi|325157025|gb|EGC69193.1| GTP-binding protein [Enterococcus casseliflavus ATCC 12755]
Length = 377
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 207/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q TNP GY P L K GL E
Sbjct: 15 CIGCGAVIQTTNPNELGY--TPQSALEK----------------------GL-------E 43
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
+ EV C RC LRHY +++DV+ L D DF +L++ G + ++++
Sbjct: 44 SGEV-------YCQRCFRLRHYNEIQDVS----LTDDDF-----LRLLNEIGEKEALIVN 87
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + V GN P V+LV K+D+LP SL ++
Sbjct: 88 VVDIFDFNGSLIPGLHRFV----------------GNNP-VLLVGNKVDILPKSLKKSKM 130
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+++RA E G+ + L +++ K G + ++ + +V+ +G N GKSTL
Sbjct: 131 TQWMKERAHEAGLRPVDVL--LTSAKKPGETEALLQAIETYREGRDVYVVGVTNVGKSTL 188
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K + I +T + PGTTL ++E L L DTPG++H +
Sbjct: 189 INQIIK----------QTAGINELITTSRFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 236
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ K+V KE+KP+ Y++ ++ + GL R D + S + +
Sbjct: 237 QMAHYLGKKDLKIVAPAKEIKPKVYQLNPEQTLFLGGLARFDFIQGERSSF--IAYVAND 294
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+ +H K A EKH G LQPP ++ V + + VR EF + DI A
Sbjct: 295 VAIHRTKLSKADEFYEKHVGGLLQPPRADE-VADFPELVRFEFSI------KEKTDIVFA 347
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW ++ + W +GVD++ R AL+
Sbjct: 348 GLGWITI--TKPCVIAGWAPKGVDVLRRKALV 377
>gi|418963084|ref|ZP_13514926.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383343950|gb|EID22121.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 368
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 120/385 (31%), Positives = 186/385 (48%), Gaps = 58/385 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS- 212
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEITDVQ----LTDDDF----LRLLHEVGDSNALVVNVVDIFDFNGSV 89
Query: 213 ---FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
PR VA GN V+LV K D+LP S+ ++ W+ +R
Sbjct: 90 IPGLPRFVA-------------------GN--DVLLVGNKKDILPKSVKTSKVTQWLMER 128
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
A E+G+ + + SA +K LI+ + R +V+ +G N GKSTL+NAI +
Sbjct: 129 AHEEGLRPVDVV-LTSAQNKQAIKELIEKIEQYRKGR-DVYVVGVTNVGKSTLINAIIQE 186
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
+ GD E +T + PGTTL ++E L + ++DTPG++H +Q+ L+
Sbjct: 187 IT----GDKEV------ITTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLS 234
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
+ K ++ KE+KP+TY++ ++ + GL R D + T + L LH K
Sbjct: 235 AKNLKYISPKKEIKPKTYQLNREQTLFLGGLGRFDFVSGDKQGF--TAYFDNELKLHRTK 292
Query: 450 TENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
A EKH G L PP +K V + + V+ E + + D+ +GLGW +
Sbjct: 293 LAGAGEFYEKHVGSLLTPP-SKKEVADFPQLVKHELKIEAKT------DVVFSGLGW--I 343
Query: 510 RLKGEAALGVWTYEGVDIVLRNALL 534
R+ G A + W EGV +V R A++
Sbjct: 344 RVTGPAKIAAWVPEGVAVVTRKAII 368
>gi|332524018|ref|ZP_08400270.1| ribosome biogenesis GTPase YqeH [Streptococcus porcinus str.
Jelinkova 176]
gi|332315282|gb|EGJ28267.1| ribosome biogenesis GTPase YqeH [Streptococcus porcinus str.
Jelinkova 176]
Length = 371
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 210/454 (46%), Gaps = 91/454 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q N + G+ P ++KKG E
Sbjct: 6 CIGCGVKIQTENKEEIGF--TPQV---------------------AVKKG--------ME 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDF-DFDHTVGRKLMSASGARSVVLM 202
T E+ C RC LRHY ++ DV + + DF H VG + ++V+
Sbjct: 35 TGEL-------YCQRCFRLRHYNEISDVQISD--DDFLTLLHEVGD-------SDALVVN 78
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS +++ V+ GN V+LV K D+LP S ++
Sbjct: 79 VVDIFDFNGSVIPGLSRFVA---------------GN--DVLLVGNKKDILPKSTKDSKV 121
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ I + SA + +K LI ++D + +V+ +G N GKSTL
Sbjct: 122 NQWLLERAHEEGLRPIDVM-LTSAQNKYAIKELIA-LIDKFRRGRDVYVVGVTNVGKSTL 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + KNI+ T + PGTTL ++E L +FDTPG++H +
Sbjct: 180 INAIIQEISG-------NKNII---TTSRFPGTTLD--KIEIPLEDGTYIFDTPGIIHRH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ ++ K ++ KE+KP+TY++ AG ++ +AGL R D + T +
Sbjct: 228 QMAHYLSAKDLKYISPKKEIKPKTYQLNAGQTLFLAGLGRFDFISGIKQGF--TAYFDNN 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K E A KH G L PP E R + + + EF + S +D+ +
Sbjct: 286 LALHRTKLEGADAFYHKHRGSLLIPPDNENR--DFPELINYEFFI------DSKMDLVFS 337
Query: 503 GLGWFSVRLKGEAALGV--WTYEGVDIVLRNALL 534
GLGW + E + + W +GV ++ R A++
Sbjct: 338 GLGWICINGSKENPVKIAGWAPKGVAVMTRKAII 371
>gi|225855180|ref|YP_002736692.1| GTP-binding protein YqeH [Streptococcus pneumoniae JJA]
gi|225723024|gb|ACO18877.1| GTP-binding protein [Streptococcus pneumoniae JJA]
Length = 368
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 207/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q T+ G+ P L K GL
Sbjct: 5 LCIGCGATIQTTDKAGLGF--TPQSALEK----------------------GL------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
ET EV C RC LRHY ++ DV + N DF KL+ G + ++V+
Sbjct: 34 ETGEV-------YCQRCFRLRHYNEITDVQLTN--DDF-------LKLLHEVGDSDALVV 77
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 78 NVIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGK 120
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+ +RA E+G+ + + SA +K +ID + R + + +G N GKST
Sbjct: 121 ISQWLMKRAHEEGLRPVDVV-LTSAQNKHTIKEVIDKIEHYRKGR-DAYVVGVTNVGKST 178
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H
Sbjct: 179 LINAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHR 226
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 227 HQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDN 284
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH K E A +KH G L PP K E+ + V+ F + + D+
Sbjct: 285 ELKLHRSKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +R+ G A + VW EGV +V R A++
Sbjct: 338 SGLGW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|47095444|ref|ZP_00233054.1| GTPase, putative [Listeria monocytogenes str. 1/2a F6854]
gi|254912165|ref|ZP_05262177.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254936493|ref|ZP_05268190.1| GTP-binding protein YqeH [Listeria monocytogenes F6900]
gi|386047143|ref|YP_005965475.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes J0161]
gi|47016265|gb|EAL07188.1| GTPase, putative [Listeria monocytogenes serotype 1/2a str. F6854]
gi|258609086|gb|EEW21694.1| GTP-binding protein YqeH [Listeria monocytogenes F6900]
gi|293590137|gb|EFF98471.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|345534134|gb|AEO03575.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes J0161]
Length = 366
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 206/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY P +LN NE
Sbjct: 7 CIGCGAVIQTEDPDKIGY--APKSSLN-----------NEQ------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L+HY +++DV L D DF R L S +++++ V
Sbjct: 35 ----------VICKRCFRLKHYNEIQDVA----LTDDDF----LRILNQISSKQALIVYV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS+ + + +G+ P V+LV K D+LP SL +
Sbjct: 77 VDIFDFDGSWLPGLPRF----------------AGSNP-VLLVGNKEDVLPKSLKRDKLT 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R RA+E G++ T + VSA K G +L++ + +L + +V+ +G N GKSTL+
Sbjct: 120 RWMRTRAKEQGLAA-TDVVLVSAEKGHGFDTLLEKIDELRNGQ-DVYVVGCTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K E N++ T + PGTTL ++E L L DTPG+++ +Q
Sbjct: 178 NRIIKQASG-------ENNVI---TTSQFPGTTLD--KIEIPLADGNVLVDTPGIINHHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + K + KE+KP +++ ++ + L R+D +S+ V+ S L
Sbjct: 226 MAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + EK G LQPP E+ +E L K V F + DI +G
Sbjct: 284 PIHRTKLEKADALYEKQAGIVLQPPT-EEGMETLPKLVPYSFTI------KEKADIVFSG 336
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW ++ +G A + W EGV +R +L+
Sbjct: 337 LGWVTIP-EGGAKVTAWVPEGVSATIRTSLV 366
>gi|334881686|emb|CCB82584.1| GTPase [Lactobacillus pentosus MP-10]
gi|339636928|emb|CCC15753.1| GTPase [Lactobacillus pentosus IG1]
Length = 378
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 207/465 (44%), Gaps = 92/465 (19%)
Query: 76 EATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGL 135
E + + C GCG +Q T+PK GY P+ L K
Sbjct: 3 ETSEETLYCIGCGAAIQTTDPKAAGY--TPNSALQK------------------------ 36
Query: 136 VVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG 195
+ + + C RC LRHY ++ V L D DF R L +
Sbjct: 37 ----------SLASDAQDLYCQRCFRLRHYNEIVPVG----LTDDDFR----RLLATIRD 78
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS 255
A ++V+ VVD D +GS + + V D V+LV K D+LP
Sbjct: 79 ANALVVYVVDIFDLNGSIIPGLQRFVGDNP-----------------VLLVGNKEDVLPR 121
Query: 256 SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGK--RG-NVWAI 312
L T+ W+ Q+ R GI + + SA K IDD++ + K RG +V+ +
Sbjct: 122 QLRRTKLREWMNQQVRAQGIKPV-DVALTSAKKGHA----IDDLLAMIEKYRRGRDVYVV 176
Query: 313 GAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKL 372
G N GKSTL+N I + + +T + PGTTL ++E L K+
Sbjct: 177 GVTNVGKSTLINRIIAN----------NTGLKDLITTSRFPGTTLD--KIEIPLDDGHKM 224
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES 432
DTPG++HP Q+ L+ ++ KLV+ KE++P+ +++ G ++ + G+ R+D+ ++ +
Sbjct: 225 VDTPGIIHPEQMAHVLSGDDLKLVSPQKEIRPKGFQLGNGQTLFLGGVARLDIVDTLKPT 284
Query: 433 IYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSW 492
TV+ L LH +TENA KH G + PP G V + VR EF V+ +S
Sbjct: 285 --GTVYVDNNLTLHRTRTENADNFYTKHVGELITPPTGAA-VADFPPLVRHEFKVTETS- 340
Query: 493 DSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYR 537
DI GLGW +V + + W +GV ++ R A++ R
Sbjct: 341 -----DIVFEGLGWVTV--AADTRVAGWAPKGVAVLTRPAMINKR 378
>gi|257875519|ref|ZP_05655172.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC20]
gi|257809685|gb|EEV38505.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC20]
Length = 372
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 207/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q TNP GY P L K GL E
Sbjct: 10 CIGCGAVIQTTNPNELGY--TPQSALEK----------------------GL-------E 38
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
+ EV C RC LRHY +++DV+ L D DF +L++ G + ++++
Sbjct: 39 SGEV-------YCQRCFRLRHYNEIQDVS----LTDDDF-----LRLLNEIGEKEALIVN 82
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + V GN P V+LV K+D+LP SL ++
Sbjct: 83 VVDIFDFNGSLIPGLHRFV----------------GNNP-VLLVGNKVDILPKSLKKSKM 125
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+++RA E G+ + L +++ K G + ++ + +V+ +G N GKSTL
Sbjct: 126 TQWMKERAHEAGLRPVDVL--LTSAKKPGETEALLQAIETYREGRDVYVVGVTNVGKSTL 183
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K + I +T + PGTTL ++E L L DTPG++H +
Sbjct: 184 INQIIK----------QTAGINELITTSRFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 231
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ K+V KE+KP+ Y++ ++ + GL R D + S + +
Sbjct: 232 QMAHYLGKKDLKIVAPAKEIKPKVYQLNPEQTLFLGGLARFDFIQGERSSF--IAYVAND 289
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+ +H K A EKH G LQPP ++ V + + VR EF + DI A
Sbjct: 290 VAIHRTKLTKADEFYEKHVGGLLQPPRADE-VADFPELVRFEFSI------KEKTDIVFA 342
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW ++ + W +GVD++ R AL+
Sbjct: 343 GLGWITI--TKPCVIAGWAPKGVDVLRRKALV 372
>gi|299116827|emb|CBN74939.1| Lrc5, mitochondrial YqeH-related GTPase [Ectocarpus siliculosus]
Length = 738
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 186/396 (46%), Gaps = 64/396 (16%)
Query: 152 KPVVCARCHALRHYGKVKDVTVENLLPDF-DFDHTVGRKLMSASGA----RSVVLMVVDA 206
K +VC RC+ LR+YG V+D L P F D D ++ + G+ R +++ +VD
Sbjct: 374 KLLVCQRCYRLRNYGSVED----TLRPGFSDSDLLTPQRFLELLGSIRKQRCLIIYLVDL 429
Query: 207 ADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWV 266
DF G+F + K+ +GN P V++ K+DLLP L R WV
Sbjct: 430 FDFHGTFLYNLPKI----------------TGNNP-VLVAGNKVDLLPKDLKRQRVTKWV 472
Query: 267 RQRAREDGIS--KITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLN 324
R + RE G+ ++ +H VS G+ L+ G+ G A+
Sbjct: 473 RDKCRESGLPDMEMRDVHLVSCKHGVGIPPLMRKGGKGGGRGGKAPAV------------ 520
Query: 325 AIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQI 384
AGRG +T + VPGTTL ++V+ L + L+DTPGLL P+ +
Sbjct: 521 -------AGRG-----------VTVSSVPGTTLDFLKVD--LGDKRALYDTPGLLLPHTL 560
Query: 385 TTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLP 444
T+RL EE + K++ T+R+ G + + GL R VE + +T + S +
Sbjct: 561 TSRLNAEELRAAIPKKKVDHVTFRVGEGKVVLVGGLAR--VEVVTGRPFLLTFFVSNDVR 618
Query: 445 LHMGKTENACTMVEKHFGR--QLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
LH M+ +H G+ + PP +RV+ELG V +F + G+ W S+ D+ A
Sbjct: 619 LHPTDARRVDDMLSEHVGKGQMIFPPFDPERVDELGPLVPTDFDIMGAGWRESAADVVIA 678
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRS 538
GLGW SV G L VW GV ++ R LLPY S
Sbjct: 679 GLGWVSVTGAGPVTLRVWAPRGVLVMAREPLLPYES 714
>gi|227543936|ref|ZP_03973985.1| GTP-binding protein [Lactobacillus reuteri CF48-3A]
gi|338202609|ref|YP_004648754.1| GTP-binding protein [Lactobacillus reuteri SD2112]
gi|227186087|gb|EEI66158.1| GTP-binding protein [Lactobacillus reuteri CF48-3A]
gi|336447849|gb|AEI56464.1| GTP-binding protein [Lactobacillus reuteri SD2112]
Length = 375
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 201/451 (44%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY + ++L++G E
Sbjct: 13 CIGCGSIIQTEDPNGLGYTPK-----------------------SALERG--------KE 41
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ V+ L D DF R L A ++++ V
Sbjct: 42 TGEL-------YCQRCFRLRHYNEIAPVS----LTDDDF----LRLLNQIRDANALIVYV 86
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS + + V D V+LV K DLLP SL +
Sbjct: 87 VDVFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKEDLLPRSLRRPKLT 129
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ+A G+ I + VSA KN + L+D V++ +V+ +G N GKSTL+
Sbjct: 130 DWIRQQANIAGLRPIDTV-LVSAKKNHQIDHLLD-VIEKYRHNRDVYVVGVTNVGKSTLI 187
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K + + +T + PGTTL ++E L L DTPG++H Q
Sbjct: 188 NQIIK----------QRTGVKELITTSRFPGTTLD--KIEIPLDDGHVLVDTPGIIHQEQ 235
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ ++ K+V KE+KP+TY++ G ++ + G+ R D E + + L
Sbjct: 236 MAHVLSPKDLKIVAPQKEIKPKTYQLNDGQTLFLGGVARFDYLHG--ERAGMVAYFDNNL 293
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K NA KH G L PP +++ + R EFH++ S DI G
Sbjct: 294 PIHRTKLSNADNFYAKHLGDLLTPPTSDEK-DGFPPLERYEFHITEKS------DIVFEG 346
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V K A W +GV ++R A++
Sbjct: 347 LGWITVPAKTTVA--AWVPKGVGALVRRAMI 375
>gi|379723335|ref|YP_005315466.1| hypothetical protein PM3016_5625 [Paenibacillus mucilaginosus 3016]
gi|378572007|gb|AFC32317.1| YqeH [Paenibacillus mucilaginosus 3016]
Length = 368
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 208/452 (46%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q NP G+ P Q L++
Sbjct: 6 CAGCGVALQQENPDQLGFV--PEQALSRT------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
PV+C RC+ +++Y + +T+ DF KL+ G S+V+
Sbjct: 33 ---------PVICQRCYRIKNYNEASGITLNQ--DDF-------LKLLGHVGTTDSLVVN 74
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
+VD DF+GS + + V GN P ++LVV KIDLLP + R
Sbjct: 75 IVDLFDFEGSMISGLPRFV----------------GNNP-IILVVNKIDLLPKVTNYNRI 117
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+WV+++A+E G+ K+ + SA KN G + +I+ +D K +++ +GA N GKSTL
Sbjct: 118 LNWVQRQAKEAGL-KVANIVLCSARKNMGFERVIE-ALDEHRKGRDIYVVGATNVGKSTL 175
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N + + ++ + LT + PGTTL +VR+ L + DTPG+++ +
Sbjct: 176 INRLIH----------DYSDLDAELTVSQYPGTTLDLVRIP--LDDGGSIIDTPGIVYKH 223
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
++T + +++ V +K +KP +++ +G S++ L R D + +S T + S
Sbjct: 224 RLTELVNKKDLMKVMPDKPMKPLVFQLNSGQSVYFGALARFDFLQGERQSF--TFYVSNS 281
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L H K E A + E H G LQPP+ E ++EL K + + ++D++ +
Sbjct: 282 LEAHRTKLEKADELYENHKGVLLQPPVLEN-LDELPKLTKHAIRIP----KGGNLDVSIS 336
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW A L + GV + +R +L+
Sbjct: 337 GLGWVKANGVQGAELAIHVPRGVKVAVRESLI 368
>gi|366089348|ref|ZP_09455821.1| GTPase YqeH [Lactobacillus acidipiscis KCTC 13900]
Length = 374
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 139/462 (30%), Positives = 208/462 (45%), Gaps = 91/462 (19%)
Query: 75 DEATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGG 134
DE +L C GCG +Q +PK PGY P +++KKG
Sbjct: 2 DENNEEL-YCIGCGAKIQSDDPKQPGY--TPV---------------------SAIKKG- 36
Query: 135 LVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSAS 194
EN+ + C RC LRHY +V DV+ L D DF L++
Sbjct: 37 -----LENDE---------LYCQRCFRLRHYNEVSDVS----LTDDDF-----LALLNQI 73
Query: 195 G-ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLL 253
G A ++++ V+D DF+GS + + V GN P V++V K DLL
Sbjct: 74 GSADALIVNVIDVFDFNGSLIPGIHRFV----------------GNNP-VLMVANKEDLL 116
Query: 254 PSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIG 313
P SL ++ + WVRQRA +GI + + SA K L+ L+ + R +V+ +G
Sbjct: 117 PRSLKRSKLKDWVRQRANAEGIHPVDVI-MTSATKQHALEELLKAIEKYREGR-DVYVVG 174
Query: 314 AQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLF 373
N GKSTL+N I K + +T + PGTTL ++E L +
Sbjct: 175 VTNVGKSTLINQIIK----------RSTGMQDLITTSSFPGTTLD--KIEIPLDDGRMIV 222
Query: 374 DTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESI 433
DTPG++H +Q+ L+ +E +L KE++P+ Y++ G ++ GL R D+
Sbjct: 223 DTPGIIHKDQMAHYLSAKELRLATPQKEIRPKVYQLAGGQTLFFGGLARFDLITGPSTRN 282
Query: 434 YVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPP-IGEKRVEELGKWVRKEFHVSGSSW 492
V V+ L +H K E A +H G LQPP GE + + R EF V S
Sbjct: 283 GVVVYMENNLQVHRTKLEKADAFFVRHQGELLQPPTTGE--LSDFPPMERFEFKVREKS- 339
Query: 493 DSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
DI GLGW +V+ G G + +GV ++ R A++
Sbjct: 340 -----DIVFEGLGWVTVK-SGSIVAG-YAPKGVGVLRRKAMI 374
>gi|420262361|ref|ZP_14765002.1| GTP-binding protein [Enterococcus sp. C1]
gi|394770118|gb|EJF49922.1| GTP-binding protein [Enterococcus sp. C1]
Length = 372
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 204/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+Q TNP GY P L K GL E
Sbjct: 10 CIGCGALIQTTNPNELGY--TPQSALEK----------------------GL-------E 38
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
+ EV C RC LRHY +++DV L D DF +L++ G + ++++
Sbjct: 39 SGEV-------YCQRCFRLRHYNEIQDVA----LTDDDF-----LRLLNEIGEKDALIVN 82
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + V D V+LV K+D+LP SL ++
Sbjct: 83 VVDIFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKVDILPKSLKKSKM 125
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+++RA E G+ + L +++ K G + ++ + +V+ +G N GKSTL
Sbjct: 126 TQWMKERAYEVGLRPVDVL--LTSAKKPGETQALLQAIETYREGRDVYVVGVTNVGKSTL 183
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K + I +T + PGTTL ++E L L DTPG++H +
Sbjct: 184 INQIIK----------QTAGINELITTSRFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 231
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ K+V KE+KP+ Y++ ++ + GL R D + S + +
Sbjct: 232 QMAHYLGKKDLKIVAPAKEIKPKVYQLNPEQTLFLGGLARFDFIQGERSSF--VAYVAND 289
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+ +H K A EKH G LQPP ++ V + + VR EF + DI A
Sbjct: 290 VAIHRTKLSKADEFYEKHVGGLLQPPRADE-VADFPELVRFEFSI------KEKTDIVFA 342
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW ++ + W +GVD++ R AL+
Sbjct: 343 GLGWITI--TKPCVIAGWAPKGVDVLRRKALV 372
>gi|337748425|ref|YP_004642587.1| hypothetical protein KNP414_04185 [Paenibacillus mucilaginosus
KNP414]
gi|336299614|gb|AEI42717.1| YqeH [Paenibacillus mucilaginosus KNP414]
Length = 368
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 208/452 (46%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q NP G+ P Q L++
Sbjct: 6 CAGCGVALQQENPDQLGFV--PEQALSRT------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
PV+C RC+ +++Y + +T+ DF KL+ G S+V+
Sbjct: 33 ---------PVICQRCYRIKNYNEASGITLNQ--DDF-------LKLLGHVGTTDSLVVN 74
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
+VD DF+GS + + V GN P ++LVV KIDLLP + R
Sbjct: 75 IVDLFDFEGSMISGLPRFV----------------GNNP-IILVVNKIDLLPKVTNYNRI 117
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+WV+++A+E G+ K+ + SA KN G + +I+ +D K +++ +GA N GKSTL
Sbjct: 118 LNWVQRQAKEAGL-KVADIVLCSARKNMGFERVIE-ALDEHRKGRDIYVVGATNVGKSTL 175
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N + + ++ + LT + PGTTL +VR+ L + DTPG+++ +
Sbjct: 176 INRLIH----------DYSDLDAELTVSQYPGTTLDLVRIP--LDDGGSIIDTPGIVYKH 223
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
++T + +++ V +K +KP +++ +G S++ L R D + +S T + S
Sbjct: 224 RLTELVNKKDLMKVMPDKPMKPLVFQLNSGQSVYFGALARFDFLQGERQSF--TFYVSNS 281
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L H K E A + E H G LQPP+ E ++EL K + + ++D++ +
Sbjct: 282 LEAHRTKLEKADELYENHKGVLLQPPVLEN-LDELPKLTKHAIRIP----KGGNLDVSIS 336
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW A L + GV + +R +L+
Sbjct: 337 GLGWVKANGVQGAELAIHVPRGVKVAVRESLI 368
>gi|257865892|ref|ZP_05645545.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC30]
gi|257872225|ref|ZP_05651878.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC10]
gi|257799826|gb|EEV28878.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC30]
gi|257806389|gb|EEV35211.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC10]
Length = 372
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 207/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q TNP GY P L K GL E
Sbjct: 10 CIGCGAVIQTTNPNELGY--TPQSALEK----------------------GL-------E 38
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
+ EV C RC LRHY +++DV+ L D DF +L++ G + ++++
Sbjct: 39 SGEV-------YCQRCFRLRHYNEIQDVS----LTDDDF-----LRLLNEIGEKEALIVN 82
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + V GN P V+LV K+D+LP SL ++
Sbjct: 83 VVDIFDFNGSLIPGLHRFV----------------GNNP-VLLVGNKVDILPKSLKKSKM 125
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+++RA E G+ + L +++ K G + ++ + +V+ +G N GKSTL
Sbjct: 126 TQWMKERAHEAGLRPVDVL--LTSAKKPGETEALLQAIETYREGRDVYVVGVTNVGKSTL 183
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K + I +T + PGTTL ++E L L DTPG++H +
Sbjct: 184 INQIIK----------QTAGINELITTSRFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 231
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ K+V KE+KP+ Y++ ++ + GL R D + S + +
Sbjct: 232 QMAHYLGKKDLKIVAPAKEIKPKVYQLNPEQTLFLGGLARFDFIQGERSSF--IAYVAND 289
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+ +H K A EKH G LQPP ++ V + + VR EF + DI A
Sbjct: 290 VAIHRTKLTKADEFYEKHVGGLLQPPRADE-VADFPELVRFEFSI------KEKTDIVFA 342
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW ++ + W +GVD++ R AL+
Sbjct: 343 GLGWITI--TKPCVIAGWAPKGVDVLKRKALV 372
>gi|254827779|ref|ZP_05232466.1| GTP-binding protein YqeH [Listeria monocytogenes FSL N3-165]
gi|258600159|gb|EEW13484.1| GTP-binding protein YqeH [Listeria monocytogenes FSL N3-165]
Length = 366
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 206/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY P +LN NE
Sbjct: 7 CIGCGAVIQTEDPDKIGY--APKSSLN-----------NEQ------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L+HY +++DV L D DF R L S +++++ V
Sbjct: 35 ----------VICKRCFRLKHYNEIQDVA----LTDDDF----LRILNQISSKQALIVYV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS+ + + +G+ P V+LV K D+LP SL +
Sbjct: 77 VDIFDFDGSWLPGLPRF----------------AGSNP-VLLVGNKEDVLPKSLKRDKLT 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R RA+E G++ T + VSA K G +L++ + +L + +V+ +G N GKSTL+
Sbjct: 120 RWMRTRAKEQGLAA-TDVVLVSAEKGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K E N++ T + PGTTL ++E L L DTPG+++ +Q
Sbjct: 178 NRIIKQASG-------ENNVI---TTSQFPGTTLD--KIEIPLADGNVLVDTPGIINHHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + K + KE+KP +++ ++ + L R+D +S+ V+ S L
Sbjct: 226 MAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + EK G LQPP E+ ++ L K V F V DI +G
Sbjct: 284 PIHRTKLEKAEALYEKQAGLVLQPPT-EEDMKTLPKLVPYSFTV------KEKADIVFSG 336
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW ++ +G A + W EGV +R +L+
Sbjct: 337 LGWVTIP-EGGAKVTAWVPEGVSATIRTSLV 366
>gi|116872920|ref|YP_849701.1| GTP-binding protein YqeH [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116741798|emb|CAK20922.1| GTPase family protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 366
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 206/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P+ GY P +LN NE
Sbjct: 7 CIGCGAIIQTEDPEKIGY--APKSSLN-----------NEQ------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L+HY +++DV L D DF R L S +++++ V
Sbjct: 35 ----------VICKRCFRLKHYNEIQDVA----LTDDDF----LRILNQISSKQALIVYV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS+ + + +G+ P V+LV K D+LP SL +
Sbjct: 77 VDIFDFDGSWLPGLPRF----------------AGSNP-VLLVGNKEDVLPKSLKRDKLT 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R RA+E G++ T + VSA K G +L++ + +L + +V+ +G N GKSTL+
Sbjct: 120 RWMRTRAKEQGLAA-TDVVLVSAEKGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K E N++ T + PGTTL ++E L L DTPG+++ +Q
Sbjct: 178 NRIIKQASG-------ENNVI---TTSQFPGTTLD--KIEIPLADGNVLVDTPGIINHHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + K + KE+KP +++ ++ + L R+D +S+ V+ S L
Sbjct: 226 MAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + EK G LQPP E ++ L K V F V DI +G
Sbjct: 284 PIHRTKLEKADDLYEKQAGFVLQPPT-EDGMKTLPKLVPYSFTV------KEKADIVFSG 336
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW ++ +G A + W EGV +R +L+
Sbjct: 337 LGWITIP-EGGAKVTAWVPEGVSATIRTSLV 366
>gi|319939798|ref|ZP_08014154.1| GTP-binding protein [Streptococcus anginosus 1_2_62CV]
gi|319811011|gb|EFW07326.1| GTP-binding protein [Streptococcus anginosus 1_2_62CV]
Length = 368
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 185/381 (48%), Gaps = 50/381 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEITDVQ----LTDDDF----LRLLHEVGDSNALVVNVVDIFDFNGSI 89
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V GN V+LV K D+LP S+ ++ W+ +RA E+
Sbjct: 90 IPGLPRFVV---------------GN--DVLLVGNKKDILPKSVKTSKVAQWLTERAHEE 132
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ + + SA +K LI+ + R +V+ +G N GKSTL+NAI + +
Sbjct: 133 GLRPVDVV-LTSAQNKQAIKELIEKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEIT-- 188
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
GD E +T + PGTTL ++E L + ++DTPG++H +Q+ L+ +
Sbjct: 189 --GDKEV------ITTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRHQMAHYLSAKNL 238
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
K ++ KE+KP+TY++ ++ + GL R D + T + L LH K A
Sbjct: 239 KYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVSGDKQGF--TAYFDNELKLHRTKLARA 296
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
EKH G L PP +K V + K V+ E + + D+ +GLGW +R+ G
Sbjct: 297 GEFYEKHVGSLLTPP-SKKEVADFPKLVKHELKIEAKT------DVVFSGLGW--IRVIG 347
Query: 514 EAALGVWTYEGVDIVLRNALL 534
A + W EGV +V R A++
Sbjct: 348 PAKIAAWAPEGVAVVTRKAII 368
>gi|16800594|ref|NP_470862.1| GTP-binding protein YqeH [Listeria innocua Clip11262]
gi|422412980|ref|ZP_16489939.1| ribosome biogenesis GTPase YqeH [Listeria innocua FSL S4-378]
gi|423100573|ref|ZP_17088280.1| ribosome biogenesis GTPase YqeH [Listeria innocua ATCC 33091]
gi|16413999|emb|CAC96757.1| lin1526 [Listeria innocua Clip11262]
gi|313618857|gb|EFR90732.1| ribosome biogenesis GTPase YqeH [Listeria innocua FSL S4-378]
gi|370792797|gb|EHN60640.1| ribosome biogenesis GTPase YqeH [Listeria innocua ATCC 33091]
Length = 366
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 207/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY P +LN NE
Sbjct: 7 CIGCGAIIQTEDPDKIGY--APKSSLN-----------NEQ------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L+HY +++DV L D DF R L S +++++ V
Sbjct: 35 ----------VICKRCFRLKHYNEIQDVA----LTDDDF----LRILNQISSKQALIVYV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS+ + + +G+ P V+LV K D+LP SL +
Sbjct: 77 VDIFDFDGSWLPGLPRF----------------AGSNP-VLLVGNKEDVLPKSLKRDKLT 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R RA+E G++ T + VSA K G +L++ + +L + +V+ +G N GKSTL+
Sbjct: 120 RWMRTRAKEQGLAA-TDVVLVSAEKGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K E N++ T + PGTTL ++E L L DTPG+++ +Q
Sbjct: 178 NRIIKQASG-------ENNVI---TTSQFPGTTLD--KIEIPLADGNVLVDTPGIINHHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + K + KE+KP +++ ++ + L R+D +S+ V+ S L
Sbjct: 226 MAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + EK G LQPP E+ ++ L K V F V + DI +G
Sbjct: 284 PIHRTKLEKADALYEKQAGFVLQPPT-EEGMKTLPKLVPYTFTVKDKA------DIVFSG 336
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW ++ +G A + W EGV +R +L+
Sbjct: 337 LGWVTIP-EGGAKVTAWVPEGVSATIRTSLV 366
>gi|194017759|ref|ZP_03056369.1| ribosome biogenesis GTPase YqeH [Bacillus pumilus ATCC 7061]
gi|194010659|gb|EDW20231.1| ribosome biogenesis GTPase YqeH [Bacillus pumilus ATCC 7061]
Length = 366
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 197/381 (51%), Gaps = 48/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L++Y +++DV+ L + DF + L S S+++ VVD DF+GS+
Sbjct: 34 VICQRCFRLKNYNEIQDVS----LTEDDFLNI----LHSIGETDSLIVKVVDIFDFNGSW 85
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
++++V G P ++LV K+D+LP S+ R HW+++ A+E+
Sbjct: 86 INGLSRIV----------------GGNP-ILLVGNKVDILPKSVKKDRLIHWMKREAKEN 128
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G++ I + +SA + G+ +++ +D + NV+ +G N GKST +N I K V
Sbjct: 129 GLNPI-DVFLISASRGQGVPEVME-AIDHYREGRNVYVVGCTNVGKSTFINRIIKEVSG- 185
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
++N++ T + PGTTL + + L + LFDTPG+++ +Q+ +++ +
Sbjct: 186 ------KENVI---TTSQYPGTTLDAIEIP--LDDGSALFDTPGIINRHQMAHYVSKNDL 234
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
K++ KELKPRT+++ +++ GL R D + S + L +H K ENA
Sbjct: 235 KILTPKKELKPRTFQLNEAQTLYFGGLARFDYVKGGRTSF--VCYMPNELNIHRTKLENA 292
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ EKH G L PP E +E+ V F + D +DI +GLGW + G
Sbjct: 293 DDLYEKHAGELLSPPSKEG-MEDFPPLVPHTFTI-----DQPKMDIVFSGLGWITANDAG 346
Query: 514 EAALGVWTYEGVDIVLRNALL 534
+ + V+ +GV + +R +L+
Sbjct: 347 K-QIKVYAPKGVHVFMRRSLI 366
>gi|16803531|ref|NP_465016.1| GTP-binding protein YqeH [Listeria monocytogenes EGD-e]
gi|386043802|ref|YP_005962607.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes 10403S]
gi|386050467|ref|YP_005968458.1| GTP-binding protein YqeH [Listeria monocytogenes FSL R2-561]
gi|404283983|ref|YP_006684880.1| GTPase [Listeria monocytogenes SLCC2372]
gi|404410792|ref|YP_006696380.1| GTPase [Listeria monocytogenes SLCC5850]
gi|405758539|ref|YP_006687815.1| GTPase [Listeria monocytogenes SLCC2479]
gi|16410920|emb|CAC99569.1| lmo1491 [Listeria monocytogenes EGD-e]
gi|345537036|gb|AEO06476.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes 10403S]
gi|346424313|gb|AEO25838.1| GTP-binding protein YqeH [Listeria monocytogenes FSL R2-561]
gi|404230618|emb|CBY52022.1| putative GTPase [Listeria monocytogenes SLCC5850]
gi|404233485|emb|CBY54888.1| putative GTPase [Listeria monocytogenes SLCC2372]
gi|404236421|emb|CBY57823.1| putative GTPase [Listeria monocytogenes SLCC2479]
Length = 366
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 206/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY P +LN NE
Sbjct: 7 CIGCGAVIQTEDPDKIGY--APKSSLN-----------NEQ------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L+HY +++DV L D DF R L S +++++ V
Sbjct: 35 ----------VICKRCFRLKHYNEIQDVA----LTDDDF----LRILNQISSKQALIVYV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS+ + + +G+ P V+LV K D+LP SL +
Sbjct: 77 VDIFDFDGSWLPGLPRF----------------AGSNP-VLLVGNKEDVLPKSLKRDKLT 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R RA+E G++ T + VSA K G +L++ + +L + +V+ +G N GKSTL+
Sbjct: 120 RWMRTRAKEQGLAA-TDVVLVSAEKGHGFDTLLEKIDELRNGQ-DVYVVGCTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K E N++ T + PGTTL ++E L L DTPG+++ +Q
Sbjct: 178 NRIIKQASG-------ENNVI---TTSQFPGTTLD--KIEIPLADGNVLVDTPGIINHHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + K + KE+KP +++ ++ + L R+D +S+ V+ S L
Sbjct: 226 MAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + EK G LQPP E+ ++ L K V F V DI +G
Sbjct: 284 PIHRTKLEKAEALYEKQAGLVLQPPT-EEDMKTLPKLVPYSFTV------KEKADIVFSG 336
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW ++ +G A + W EGV +R +L+
Sbjct: 337 LGWVTIP-EGGAKVTAWVPEGVSATIRTSLV 366
>gi|408790073|ref|ZP_11201706.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus florum 2F]
gi|408520647|gb|EKK20682.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus florum 2F]
Length = 376
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 192/451 (42%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+Q T+P GY +S L GG
Sbjct: 15 CIGCGALIQTTSPNAAGY-------------------TPKSALEKGLASGG--------- 46
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ C RC LRHY +++ V + D R L +++V+ V
Sbjct: 47 ---------DLYCQRCFRLRHYNEIQPVALA--------DDEFLRLLSRIRETKALVVYV 89
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D D +GS + + V D ++ V K+DLLP+S P + +
Sbjct: 90 IDIFDVNGSLISGLQRFVGDNP-----------------ILAVGNKVDLLPASFKPKKMK 132
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ + G+ + + VSA N + L+ V A R +V+ +G N GKSTL+
Sbjct: 133 DWLRQMLNQAGLRPVA-IELVSAKTNQAVDQLLAAVNQAANGR-DVYVVGVTNVGKSTLI 190
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I + E I +T + PGTTL ++++ L +L DTPG++ +Q
Sbjct: 191 NQIIR----------ESSGIKDVITTSKFPGTTLDLIKIP--LDNGRELIDTPGIIQESQ 238
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L + K V K +KPR+Y++ G ++ + L R D + TV+A +
Sbjct: 239 MAHYLQPADLKYVTPQKRIKPRSYQLNPGQTLFLGALGRFDFIQGQKSGF--TVFADNNV 296
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K ENA KH G L PP G V+ L R EF V+ +S D+ G
Sbjct: 297 MVHRTKLENATDFFAKHAGELLTPPTGNTTVQPLQ---RHEFKVTDTS------DLVFEG 347
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V KG G + GV ++LR A+
Sbjct: 348 LGWVTVP-KGCLVAG-YAPAGVSVLLRKAMF 376
>gi|392948629|ref|ZP_10314234.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus pentosus
KCA1]
gi|392436134|gb|EIW14053.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus pentosus
KCA1]
Length = 378
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 207/465 (44%), Gaps = 92/465 (19%)
Query: 76 EATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGL 135
E + + C GCG +Q T+PK GY P+ L K
Sbjct: 3 ETSEETLYCIGCGAAIQTTDPKAAGY--TPNSALQK------------------------ 36
Query: 136 VVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG 195
+ + + C RC LRHY ++ V L D DF R L +
Sbjct: 37 ----------SLASDAQDLYCQRCFRLRHYNEIVPVG----LTDDDFR----RLLATIRD 78
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS 255
A ++V+ VVD D +GS + + V D V+LV K D+LP
Sbjct: 79 ANALVVYVVDIFDLNGSIIPGLQRFVGDNP-----------------VLLVGNKEDVLPR 121
Query: 256 SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGK--RG-NVWAI 312
L T+ W+ Q+ R GI + + SA K IDD++ + K RG +V+ +
Sbjct: 122 QLRRTKLREWMNQQVRAQGIKPV-DVALTSAKKGHA----IDDLLAMIEKYRRGRDVFVV 176
Query: 313 GAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKL 372
G N GKSTL+N I + + +T + PGTTL ++E L K+
Sbjct: 177 GVTNVGKSTLINRIIAN----------NTGLKDLITTSRFPGTTLD--KIEIPLDDGHKM 224
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES 432
DTPG++HP Q+ L+ ++ KLV+ KE++P+ +++ G ++ + G+ R+D+ ++ +
Sbjct: 225 VDTPGIIHPEQMAHVLSGDDLKLVSPQKEIRPKGFQLGNGQTLFLGGVARLDIVDTLKPT 284
Query: 433 IYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSW 492
TV+ L LH +TENA KH G + PP G V + VR EF V+ +S
Sbjct: 285 --GTVYVDNNLTLHRTRTENADNFYTKHVGELITPPTGAA-VADFPPLVRHEFKVTETS- 340
Query: 493 DSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYR 537
DI GLGW +V + + W +GV ++ R A++ R
Sbjct: 341 -----DIVFEGLGWVTV--AADTRVAGWAPKGVAVLTRPAMINKR 378
>gi|418965891|ref|ZP_13517649.1| ribosome biogenesis GTPase YqeH [Streptococcus constellatus subsp.
constellatus SK53]
gi|383341525|gb|EID19784.1| ribosome biogenesis GTPase YqeH [Streptococcus constellatus subsp.
constellatus SK53]
Length = 368
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 187/383 (48%), Gaps = 58/383 (15%)
Query: 156 CARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS--- 212
C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 40 CQRCFRLRHYNEITDVQ----LTDDDF----LRLLHEVGDSNALVVNVVDIFDFNGSVIP 91
Query: 213 -FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAR 271
PR VA GN V+LV K D+LP S+ ++ W+ +RA
Sbjct: 92 GLPRFVA-------------------GN--DVLLVGNKKDILPKSVKTSKVTQWLTERAH 130
Query: 272 EDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVD 331
E+G+ + + SA +K LI+ + R +V+ +G N GKSTL+NAI + +
Sbjct: 131 EEGLRPVDVV-LTSAQNKQAIKELIEKIEQYRKGR-DVYVVGVTNVGKSTLINAIIQEIT 188
Query: 332 AGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTRE 391
+K+I+ T + PGTTL ++E L + ++DTPG++H +Q+ L+ +
Sbjct: 189 G-------DKDII---TTSRFPGTTLD--KIEIPLVDGSHIYDTPGIIHRHQMAHYLSAK 236
Query: 392 EQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTE 451
K V+ KE+KP+TY++ ++ + GL R D + + T + L LH K
Sbjct: 237 NLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFVSGNKQGF--TAYFDNELQLHRTKLA 294
Query: 452 NACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRL 511
A EKH G L PP +K V + + V+ E + + D+ +GLGW +R+
Sbjct: 295 GAGEFYEKHVGSLLTPP-SKKEVADFPQLVKHELKI------ETKTDVVFSGLGW--IRV 345
Query: 512 KGEAALGVWTYEGVDIVLRNALL 534
G A + VW E V +V R A++
Sbjct: 346 IGPAQIAVWAPEEVAVVTRKAII 368
>gi|288555654|ref|YP_003427589.1| GTPase YqeH [Bacillus pseudofirmus OF4]
gi|288546814|gb|ADC50697.1| GTP-binding protein YqeH putative GTPase [Bacillus pseudofirmus
OF4]
Length = 370
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 202/400 (50%), Gaps = 52/400 (13%)
Query: 139 EAENETSEVKK---HEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG 195
E +NET K + ++C RC L+HY +V+DV+ L D DF KL++ G
Sbjct: 18 EDKNETGYAPKSALEREVIICQRCFRLKHYNEVQDVS----LTDDDF-----LKLLNTLG 68
Query: 196 -ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
S+++ VVD DF+GS+ + + V + V+LV K+DLLP
Sbjct: 69 HTDSLIVKVVDIFDFNGSWLPGLHRFVGNND-----------------VLLVGNKVDLLP 111
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
SL R +W+++ A+E+G+ + L +SA K G+ + ++ L R +V+ +G
Sbjct: 112 KSLKRNRLINWMKKSAKENGLKPVDVL-LMSAEKGEGVLDIASEIDRLRDGR-DVYVVGC 169
Query: 315 QNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFD 374
N GKST +N I K GGD E+ SH PGTTL ++ + L + L+D
Sbjct: 170 TNVGKSTFINRIIKEF----GGDTEQLITTSHF-----PGTTLDMIDIP--LDDGSALYD 218
Query: 375 TPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIY 434
TPG+++ +Q+ + ++E K + KE+KP +++ G +++ G+ R D S
Sbjct: 219 TPGIINHHQMAHFVDKKELKQITPKKEIKPMVFQLNEGQTLYFGGMARFDFVAGERSSF- 277
Query: 435 VTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDS 494
T + S L +H K E A + + H G L PP G++ + + V+ EF + D+
Sbjct: 278 -TCFTSNDLNIHRTKREKAEELYQNHLGELLTPP-GKESMVDFPPLVKHEFTIK----DT 331
Query: 495 SSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
S DI +GLGW +V + + + +GV + +R++++
Sbjct: 332 KS-DIVISGLGWITVNDR-NVKVEAYAPKGVGVSIRDSII 369
>gi|415885594|ref|ZP_11547522.1| GTP-binding protein YqeH [Bacillus methanolicus MGA3]
gi|387591263|gb|EIJ83582.1| GTP-binding protein YqeH [Bacillus methanolicus MGA3]
Length = 368
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 206/453 (45%), Gaps = 92/453 (20%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCGV +Q +P+ GY P L K
Sbjct: 7 LCIGCGVKIQTEDPRELGY--APKSALEK------------------------------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
+ V+C RC L+HY +V+DV L D DF K+++ G + ++++
Sbjct: 34 ---------EQVICQRCFRLKHYNEVQDVN----LTDDDF-----LKILNEIGKSDALIV 75
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
+VD DF+GS+ + + + +++LV K+DLLP S+ +
Sbjct: 76 KIVDIFDFNGSWLPGLHRFAGNN-----------------KILLVGNKVDLLPKSVKHNK 118
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
HW++Q ARE G+ K ++ VSA K +K +D + +V+ +G N GKST
Sbjct: 119 LIHWMKQEARELGL-KPEEVFLVSAAKGHFIKE-TAAAIDEYRQGKDVYVVGCTNVGKST 176
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
+N + K V G+G+ +T + PGTTL I+++ L L DTPG+++
Sbjct: 177 FINRMIKEVT----GEGDL------ITTSHFPGTTLDIIKIP--LDDGKFLMDTPGIINH 224
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ + + + K++ KE+KP+ Y++ G ++ GL R D S T + S
Sbjct: 225 HQMAHYVDKRDLKIITPKKEIKPKVYQLNEGQTLFFGGLARFDYLTGGRRSF--TCYLSN 282
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L +H K E A + H G L PP E +++ K VR EF + DI
Sbjct: 283 ELIVHRTKLEKASELYNNHVGEMLSPPRKE-QLDSFPKLVRHEFMIK-----EGKTDIVF 336
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW + G A + + +GV ++LR +L+
Sbjct: 337 SGLGWVTANEPG-AKVAAYVPKGVHVMLRKSLI 368
>gi|284801878|ref|YP_003413743.1| GTP-binding protein YqeH [Listeria monocytogenes 08-5578]
gi|284995020|ref|YP_003416788.1| GTP-binding protein YqeH [Listeria monocytogenes 08-5923]
gi|284057440|gb|ADB68381.1| GTP-binding protein YqeH [Listeria monocytogenes 08-5578]
gi|284060487|gb|ADB71426.1| GTP-binding protein YqeH [Listeria monocytogenes 08-5923]
Length = 366
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 206/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY P +LN NE
Sbjct: 7 CIGCGAVIQTEDPDKIGY--APKSSLN-----------NEQ------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L+HY +++DV L D DF R L S +++++ V
Sbjct: 35 ----------VICKRCFRLKHYNEIQDVA----LTDDDF----LRILNQISSKQALIVYV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS+ + + +G+ P V+LV K D+LP SL +
Sbjct: 77 VDIFDFDGSWLPGLHRF----------------AGSNP-VLLVGNKEDVLPKSLKRDKLT 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R RA+E G++ T + VSA K G +L++ + +L + +V+ +G N GKSTL+
Sbjct: 120 RWMRTRAKEQGLAA-TDVVLVSAEKGHGFDTLLEKIDELRNGQ-DVYVVGCTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K E N++ T + PGTTL ++E L L DTPG+++ +Q
Sbjct: 178 NRIIKQASG-------ENNVI---TTSQFPGTTLD--KIEIPLADGNVLVDTPGIINHHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + K + KE+KP +++ ++ + L R+D +S+ V+ S L
Sbjct: 226 MAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + EK G LQPP E+ ++ L K V F V DI +G
Sbjct: 284 PIHRTKLEKAEALYEKQAGLVLQPPT-EEDMKTLPKLVPYSFTV------KEKADIVFSG 336
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW ++ +G A + W EGV +R +L+
Sbjct: 337 LGWVTIP-EGGAKVTAWVPEGVSATIRTSLV 366
>gi|399046901|ref|ZP_10739089.1| ribosome biogenesis GTPase YqeH [Brevibacillus sp. CF112]
gi|433545543|ref|ZP_20501896.1| GTPase YqeH [Brevibacillus agri BAB-2500]
gi|398055051|gb|EJL47143.1| ribosome biogenesis GTPase YqeH [Brevibacillus sp. CF112]
gi|432183198|gb|ELK40746.1| GTPase YqeH [Brevibacillus agri BAB-2500]
Length = 373
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 209/452 (46%), Gaps = 88/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ +Q + K PGY A ES
Sbjct: 9 CAGCGIALQTEDAKKPGY-------------------APESALG---------------- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGA-RSVVLM 202
K V+C RC+ ++HY +V V + D DF K++ G+ +S+V+M
Sbjct: 34 -------RKVVICQRCYRIKHYNEVAPVA----MGDDDF-----LKILDGIGSTQSLVVM 77
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF GS+ R + + V GN P ++LV K+DLLP +++ R
Sbjct: 78 VVDIFDFQGSWLRGLPRFV----------------GNNP-ILLVGNKVDLLPRNINLNRV 120
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+W++ A+E G+ + + +SA K + L++ + +L R +V+ +G N GKST+
Sbjct: 121 RNWMQHEAKERGL-RPEDIVLISAQKGQHIDELLNRIGELRKGR-DVYIVGVTNVGKSTM 178
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I A +T +P PGTTL ++E L +FDTPG+++ +
Sbjct: 179 INRILHDYGAAE----------LTITTSPFPGTTLD--KIEIPLEDGRSIFDTPGIINRD 226
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
QI ++ + + + + + Y+++ G ++ + GL R+D + V V Y
Sbjct: 227 QIGHMISPSDLRKITPKSRINSKVYQLEDGQTLFLGGLARIDFVRGPKQPFVVYVDNDLY 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+H K E A +++KH G L PP GE+ + L +V+ F V S + DI +
Sbjct: 287 --IHRTKLEKADEVLQKHHGTLLVPPTGEEAAKALPPFVKHSFKVKQSQIPT---DIVIS 341
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +++ K EA + V +GV + +R L+
Sbjct: 342 GLGWVTIQGKYEANVVVHAPKGVSVGMRRGLI 373
>gi|330719333|ref|ZP_08313933.1| GTPase YqeH [Leuconostoc fallax KCTC 3537]
Length = 379
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/456 (30%), Positives = 202/456 (44%), Gaps = 101/456 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG MQ P+H GY L+ +RK + N+
Sbjct: 20 CIGCGARMQIDEPEHAGYL-----PLSALRK----QIDNDE------------------- 51
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
++C RC LRHY +++ V L D DF R L S R++V+ V
Sbjct: 52 ----------LLCQRCFRLRHYNEIQPVE----LTDDDF----ARLLHQISATRALVVYV 93
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D D GS + + V N P +++V K+DLLP SL+ R +
Sbjct: 94 IDVFDVTGSIISGLPRFVGQ---------------NNP-ILVVANKVDLLPKSLNKQRLK 137
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG-NVWAIGAQNAGKSTL 322
W++ +E GI + SA K L L++ + +L + G +V+ +G N GKSTL
Sbjct: 138 QWLQGVLKEQGIQAVDTF-LTSAKKPQNLDELLEKIDEL--RLGEDVYVVGVTNVGKSTL 194
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I KS R G I +T + PGTTL R+E L A+L DTPG++ +
Sbjct: 195 INRIIKS----RTG------IQELITTSRFPGTTLD--RIEIPLDDGAQLVDTPGIVKRD 242
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ ++ K N E+KP+TY++ A +I I GL R D E VT +
Sbjct: 243 QMAHALSEKDLKFALPNHEIKPKTYQLNAEQTIFIGGLARFDFVNG--ERAAVTAYFENN 300
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K NA +KH G LQP + V EF S S D+ A
Sbjct: 301 LMLHRTKLANADAFYDKHAGNLLQPIPAQGNT-----LVMHEFRTSEKS------DLVFA 349
Query: 503 GLGWFSV----RLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V ++G W GV++++R A++
Sbjct: 350 GLGWITVPAGMHIRG------WAPAGVNVLIRKAMI 379
>gi|404413570|ref|YP_006699157.1| GTPase [Listeria monocytogenes SLCC7179]
gi|404239269|emb|CBY60670.1| putative GTPase [Listeria monocytogenes SLCC7179]
Length = 366
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 206/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY P +LN NE
Sbjct: 7 CIGCGAVIQTEDPDKIGY--APKSSLN-----------NEQ------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L+HY +++DV L D DF R L S +++++ V
Sbjct: 35 ----------VICKRCFRLKHYNEIQDVA----LTDDDF----LRILNQISSKQALIVYV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS+ + + +G+ P V+LV K D+LP SL +
Sbjct: 77 VDIFDFDGSWLPGLPRF----------------AGSNP-VLLVGNKEDVLPKSLKRDKLT 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R RA+E G++ T + VSA K G +L++ + +L + +V+ +G N GKSTL+
Sbjct: 120 RWMRTRAKEQGLAA-TDVVLVSAEKGHGFDTLLEKIDELRNGQ-DVYVVGCTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K E N++ T + PGTTL ++E L L DTPG+++ +Q
Sbjct: 178 NRIIKQASG-------ENNVI---TTSQFPGTTLD--KIEIPLADGNVLVDTPGIINHHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + K + KE+KP +++ ++ + L R+D +S+ V+ S L
Sbjct: 226 MAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + EK G LQPP E+ ++ L K V F V DI +G
Sbjct: 284 PIHRTKLEKAEALYEKQAGLVLQPPT-EEGMKTLPKLVPYSFTV------KEKADIVFSG 336
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW ++ +G A + W EGV +R +L+
Sbjct: 337 LGWVTIP-EGGAKVTAWVPEGVSATIRTSLV 366
>gi|386053744|ref|YP_005971302.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes Finland
1998]
gi|346646395|gb|AEO39020.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes Finland
1998]
Length = 366
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 206/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY P +LN NE
Sbjct: 7 CIGCGAVIQTEDPDKIGY--APKSSLN-----------NEQ------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L+HY +++DV L D DF R L S +++++ V
Sbjct: 35 ----------VICKRCFRLKHYNEIQDVA----LTDDDF----LRILNQISSKQALIVYV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS+ + + +G+ P V+LV K D+LP SL +
Sbjct: 77 VDIFDFDGSWLPGLPRF----------------AGSNP-VLLVGNKEDVLPKSLKRDKLT 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R RA+E G++ T + VSA K G +L++ + +L + +V+ +G N GKSTL+
Sbjct: 120 RWMRTRAKEQGLAA-TDVVLVSAEKGHGFDTLLEKIDELRNGQ-DVYVVGCTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K E N++ T + PGTTL ++E L L DTPG+++ +Q
Sbjct: 178 NRIIKQASG-------ENNVI---TTSQFPGTTLD--KIEIPLADGNVLVDTPGIINHHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + K + KE+KP +++ ++ + L R+D +S+ V+ S L
Sbjct: 226 MAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + EK G LQPP E+ ++ L K V F V DI +G
Sbjct: 284 PIHRTKLEKAEALYEKQAGLVLQPPT-EEGMKTLPKLVPYSFTV------KEKADIVFSG 336
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW ++ +G A + W EGV +R +L+
Sbjct: 337 LGWVTIP-EGGAKVTAWVPEGVSATIRTSLV 366
>gi|254556448|ref|YP_003062865.1| GTP-binding protein YqeH [Lactobacillus plantarum JDM1]
gi|254045375|gb|ACT62168.1| GTP-binding protein YqeH [Lactobacillus plantarum JDM1]
Length = 378
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 204/463 (44%), Gaps = 88/463 (19%)
Query: 76 EATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGL 135
E + + C GCG +Q TNPK GY P+ L K
Sbjct: 3 ETSEETLYCIGCGAAIQTTNPKAAGY--TPNSALQK------------------------ 36
Query: 136 VVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG 195
+ + + C RC LRHY ++ V L D DF H L +
Sbjct: 37 ----------SLASDAQDLYCQRCFRLRHYNEIVPVG----LTDDDFRHL----LATIRD 78
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS 255
A ++V+ VVD D +GS + + V D V+LV K D+LP
Sbjct: 79 ANALVVYVVDIFDLNGSIIPGLQRFVGDNP-----------------VLLVGNKEDVLPR 121
Query: 256 SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG-NVWAIGA 314
L T+ W+ Q+ R GI + + SA K + L+ + +RG +V+ +G
Sbjct: 122 QLRRTKLREWMNQQVRAQGIKPV-DVALTSAKKGHSIDELLAMIEKY--RRGRDVYVVGV 178
Query: 315 QNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFD 374
N GKSTL+N I + + +T + PGTTL ++E L + D
Sbjct: 179 TNVGKSTLINRIIAN----------NTGLKDLITTSRFPGTTLD--KIEIPLDDGHMMVD 226
Query: 375 TPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIY 434
TPG++HP Q+ L+ ++ KLV+ +E++P+ +++ G ++ + G+ R+D+ ++ +
Sbjct: 227 TPGIIHPEQMAHVLSGDDLKLVSPQREIRPKGFQLGNGQTLFLGGVARLDIVDTLKAT-- 284
Query: 435 VTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDS 494
TV+ L LH +TENA KH G + PP G+ V + VR EF V+ S
Sbjct: 285 GTVYVDNNLTLHRTRTENADNFYTKHVGELITPPTGDA-VADFPPLVRHEFKVTEIS--- 340
Query: 495 SSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYR 537
DI GLGW +V + + W +GV ++ R A++ R
Sbjct: 341 ---DIVFEGLGWVTV--AADTRVAAWAPKGVAVLTRPAMINKR 378
>gi|254824450|ref|ZP_05229451.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J1-194]
gi|254992210|ref|ZP_05274400.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J2-064]
gi|255520851|ref|ZP_05388088.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J1-175]
gi|293593687|gb|EFG01448.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J1-194]
Length = 366
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 205/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY P +LN NE
Sbjct: 7 CIGCGAVIQTEDPDKIGY--APKSSLN-----------NEQ------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L+HY +++DV L D DF R L S +++++ V
Sbjct: 35 ----------VICKRCFRLKHYNEIQDVA----LTDDDF----LRILNQISSKQALIVYV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS+ + + +G+ P V+LV K D+LP SL +
Sbjct: 77 VDIFDFDGSWLPGLPRF----------------AGSNP-VLLVGNKEDVLPKSLKRDKLT 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R RA+E G++ T + VSA K G +L + + +L + +V+ +G N GKSTL+
Sbjct: 120 RWMRTRAKEQGLAA-TDVVLVSAEKGHGFDTLSEKIEELRNGQ-DVYVVGCTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K E N++ T + PGTTL ++E L L DTPG+++ +Q
Sbjct: 178 NRIIKQASG-------ENNVI---TTSQFPGTTLD--KIEIPLADGNVLVDTPGIINHHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + K + KE+KP +++ ++ + L R+D +S+ V+ S L
Sbjct: 226 MAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + EK G LQPP E+ +E L K V F + DI +G
Sbjct: 284 PIHRTKLEKADALYEKQAGIVLQPPT-EEGMETLPKLVPYSFTI------KEKADIVFSG 336
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW ++ +G A + W EGV +R +L+
Sbjct: 337 LGWVTIP-EGGAKVTAWVPEGVSATIRTSLV 366
>gi|260584202|ref|ZP_05851950.1| ribosome biogenesis GTPase YqeH [Granulicatella elegans ATCC
700633]
gi|260158828|gb|EEW93896.1| ribosome biogenesis GTPase YqeH [Granulicatella elegans ATCC
700633]
Length = 371
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 213/454 (46%), Gaps = 93/454 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q N + GY P+ L K+ L+K
Sbjct: 8 CMGCGATIQTENHEEIGY--TPTSVLTKM-----------------LEK----------- 37
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
E+PV C RC LR+Y +++ + L D DF + L S + ++V+ V
Sbjct: 38 -------EEPVYCQRCFRLRNYNELQSAS----LSDDDF----LKMLSSIAEEDALVVYV 82
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD D GS + + + GN P V+ V K+DL P S++ R +
Sbjct: 83 VDLFDLYGSMISGLKRFI----------------GNNP-VLFVANKVDLYPKSVNRNRLK 125
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDL-AGKRGNVWAIGAQNAGKSTL 322
+W+ + A+E GI + + VSA K + L+D + + GK + + +G N GKSTL
Sbjct: 126 NWIERFAKEYGIRPVDTI-LVSANKRIQIDELLDKINEYRQGK--DAYVVGVTNVGKSTL 182
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N + +S+ G K+++ T + PGTTLG + + ++ L DTPG++H +
Sbjct: 183 INKLIQSI-------GGTKDVI---TTSQFPGTTLGQIYIP--FDEKSSLIDTPGIIHRH 230
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
QI L +E K V KEL+P+T+++ A +I I GL+R+D + S+ T +
Sbjct: 231 QIAHYLAEKEVKKVLPQKELQPKTFQLNAEQTIFIGGLVRVDYTKGERNSL--TFYTPQT 288
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGE--KRVEELGKWVRKEFHVSGSSWDSSSVDIA 500
+ LH K E A +H G L PP G+ K+ L K V F V S DI
Sbjct: 289 IELHRTKLEKADEFYARHNGTILTPPTGDNVKQYPTLQKIV---FSVKEKS------DIV 339
Query: 501 AAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
AGLGW +++ G + +W+ + VD++ R +++
Sbjct: 340 IAGLGWVTIQKPG--TIEIWSPKEVDVIKRPSII 371
>gi|297584672|ref|YP_003700452.1| ribosome biogenesis GTPase YqeH [Bacillus selenitireducens MLS10]
gi|297143129|gb|ADH99886.1| ribosome biogenesis GTPase YqeH [Bacillus selenitireducens MLS10]
Length = 373
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 195/382 (51%), Gaps = 49/382 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARS-VVLMVVDAADFDGS 212
V+C RC+ L+HY +V+DV+ L D DF ++++ GAR +V+ VVD DFDGS
Sbjct: 40 VICQRCYRLKHYNEVQDVS----LTDDDF-----LRILNQLGARDGLVVKVVDIFDFDGS 90
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + + V + V+L+ K+DLLP S+ + HW+++ A+E
Sbjct: 91 WLNGLQRYVGENP-----------------VLLIGNKVDLLPKSVKRPKVIHWMKRAAKE 133
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ K +H +SA G+ D + + + +V+ G+ N GKST +N + K
Sbjct: 134 KGL-KPVDVHLMSAETGEGVLEAADLIEEYRNGK-DVFIAGSTNTGKSTFINRLLKEY-- 189
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
G +E I T + +PGTTL ++ V L + L+DTPG+++ +Q+ R+ R
Sbjct: 190 ---GAADELMI----TTSNIPGTTLDMIDVP--LDDGSSLYDTPGIINTHQMAHRVDRST 240
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K + KE+KP+ +++ SI AGL R+D + +S V+ S L +H K E
Sbjct: 241 LKTILPRKEVKPKIFQLSEEQSIFFAGLGRIDFLKGDRQSF--IVFMSNDLYIHRTKLEK 298
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A + E G QL PP G + ++ RKE+ V D+ DI +GLGW +V
Sbjct: 299 ADRLYETQLGDQLSPPSGSE-LDHFPPLKRKEWKV-----DAGKFDIVYSGLGWVTVDGP 352
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + + EGV++ +R +L
Sbjct: 353 G-AIVASYVPEGVEVSIRPSLF 373
>gi|403384197|ref|ZP_10926254.1| GTPase YqeH [Kurthia sp. JC30]
Length = 368
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 210/451 (46%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q +PK PG+
Sbjct: 7 CIGCGTQIQTEDPKAPGF----------------------------------------AP 26
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
S V+K ++ ++C RC L++Y +++ V+ L D DF R L + +++ +
Sbjct: 27 ASAVEKSDE-IICKRCFRLKNYNELQPVS----LTDDDF----LRILNGLGTQKGLIVKI 77
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V GN P V+L+ K+DLLP S++P +
Sbjct: 78 VDIFDFNGSWLPGLHRFV----------------GNNP-VLLIANKVDLLPKSINPKKVI 120
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+W+R A++ G+ + L VSA K G++ + + D +V+ +G N GKST +
Sbjct: 121 NWLRHEAKQLGLKPVDVL-LVSAHKGTGVQEAMAKI-DEYRDGEDVYVVGCTNVGKSTFI 178
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K G+G +T + PGTTL ++ + L + +FDTPG+++ +Q
Sbjct: 179 NRIIKQA-TGQG---------DIITTSYFPGTTLDMIEIP--LDDEKAIFDTPGIINHHQ 226
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + E K + KE+KP+T+++ A ++ I L R D + + TV S L
Sbjct: 227 MAHYIDPSELKYITPKKEIKPKTFQLNAEQTLFIGALARFDFIQGMRSNF--TVHISNEL 284
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A + E H G L PP ++ +E+L K VR EF + DI +G
Sbjct: 285 NIHRTKLERADELYETHKGELLAPP-SKQFIEQLPKLVRHEFSIK-----EGKTDIVFSG 338
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V+ + + + EGV+++LR +L+
Sbjct: 339 LGWITVQ-NPDVVIAAYAPEGVEVMLRPSLI 368
>gi|380032375|ref|YP_004889366.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
WCFS1]
gi|342241618|emb|CCC78852.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
WCFS1]
Length = 378
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 207/463 (44%), Gaps = 88/463 (19%)
Query: 76 EATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGL 135
E + + C GCG +Q T+PK GY P+ L K S
Sbjct: 3 ETSEETLYCIGCGAAIQTTDPKAAGY--TPNSALQKSLAS-------------------- 40
Query: 136 VVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG 195
EA++ + C RC LRHY ++ V L D DF H L +
Sbjct: 41 ---EAQD-----------LYCQRCFRLRHYNEIVPVG----LTDDDFRHL----LATIRD 78
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS 255
A ++V+ VVD D +GS + + V D V+LV K D+LP
Sbjct: 79 ANALVVYVVDIFDLNGSIIPGLQRFVGDNP-----------------VLLVGNKEDVLPR 121
Query: 256 SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG-NVWAIGA 314
L T+ W+ Q+ R GI + + SA K + L+ + +RG +V+ +G
Sbjct: 122 QLRRTKLREWMNQQVRAQGIKPV-DVALTSAKKGHSIDELLAMIEKY--RRGRDVYVVGV 178
Query: 315 QNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFD 374
N GKSTL+N I + + +T + PGTTL ++E L + D
Sbjct: 179 TNVGKSTLINRIIAN----------NTGLKDLITTSRFPGTTLD--KIEIPLDDGHMMVD 226
Query: 375 TPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIY 434
TPG++HP Q+ L+ ++ KLV+ +E++P+ +++ G ++ + G+ R+D+ ++ +
Sbjct: 227 TPGIIHPEQMAHVLSGDDLKLVSPQREIRPKGFQLGNGQTLFLGGVARLDIVDTLKAT-- 284
Query: 435 VTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDS 494
TV+ L LH +TENA KH G + PP G+ V + VR EF V+ S
Sbjct: 285 GTVYVDNNLTLHRTRTENADNFYTKHVGELITPPTGDA-VADFPPLVRHEFKVTEIS--- 340
Query: 495 SSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYR 537
DI GLGW +V + + W +GV ++ R A++ R
Sbjct: 341 ---DIVFEGLGWVTV--AADTRVAAWAPKGVAVLTRPAMINKR 378
>gi|421859665|ref|ZP_16291869.1| predicted GTPase [Paenibacillus popilliae ATCC 14706]
gi|410830763|dbj|GAC42306.1| predicted GTPase [Paenibacillus popilliae ATCC 14706]
Length = 372
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 190/383 (49%), Gaps = 48/383 (12%)
Query: 153 PVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS 212
P++C RC ++HY + V ++ DF +GR ++V+ +VD DFDGS
Sbjct: 37 PLICQRCFRIKHYNEAASVALDQ----DDFLRLLGR----IGQEDALVIHIVDLFDFDGS 88
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + V GN P V+LVV KIDLLP S + R +WV+++A+E
Sbjct: 89 VISGLQRFV----------------GNNP-VLLVVNKIDLLPRSTNWNRLTNWVQRQAKE 131
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG-NVWAIGAQNAGKSTLLNAIAKSVD 331
G+ +I + VSA +N G + L++ + +RG +V+ +GA N GKSTL+N +
Sbjct: 132 HGL-RIVDVMLVSAKRNAGFERLVEQMSHW--RRGRDVYVVGATNVGKSTLINRLIH--- 185
Query: 332 AGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTRE 391
+ ++ LT + PGTTL +V + L + DTPG+++ +++T +R+
Sbjct: 186 -------DYSDMERELTTSRYPGTTLDVVHIP--LDDGKHIIDTPGIVYTSRLTELASRQ 236
Query: 392 EQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTE 451
+ + +K LKP Y++ G + R D E +S T + S LP+H K +
Sbjct: 237 DLGALLPDKPLKPSVYQLNEGQVLFFGAFARFDFVEGERQSF--TCYISNGLPIHRTKLD 294
Query: 452 NACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRL 511
A + ++H G L PP R+ EL W + ++ ++ + DI +GLGW
Sbjct: 295 RADALYKEHRGELLSPPT-RDRLNELPAWTKHQYRIA----TGAETDIFISGLGWIKCNG 349
Query: 512 KGEAALGVWTYEGVDIVLRNALL 534
K A + + +GV ++ R A++
Sbjct: 350 KEGALVEIHAPKGVKVLTRRAMI 372
>gi|407978439|ref|ZP_11159270.1| GTPase YqeH [Bacillus sp. HYC-10]
gi|407414997|gb|EKF36613.1| GTPase YqeH [Bacillus sp. HYC-10]
Length = 366
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 210/453 (46%), Gaps = 90/453 (19%)
Query: 82 TVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAE 141
VC GCGV +Q N GY P+ +L K
Sbjct: 4 VVCIGCGVAIQTENKDQLGY--APAASLLK------------------------------ 31
Query: 142 NETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVL 201
+ V+C RC L++Y +++DV+ L + DF + L S S+++
Sbjct: 32 ----------EDVICQRCFRLKNYNEIQDVS----LTEDDFLNI----LHSIGETDSLIV 73
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
VVD DF+GS+ ++++V G P ++LV K+D+LP S+ R
Sbjct: 74 KVVDIFDFNGSWINGLSRIV----------------GGNP-ILLVGNKVDILPKSVKKDR 116
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+++ A+E+G++ I + +SA + G+ +++ + R NV+ +G N GKST
Sbjct: 117 LVQWMKREAKENGLNPI-DVFLISASRGQGVPEVMEAIDHYRDGR-NVYVVGCTNVGKST 174
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
+N I K V E+N++ T + PGTTL + + L + LFDTPG+++
Sbjct: 175 FINRIIKEVSG-------EENVI---TTSQYPGTTLDAIEIP--LDDGSALFDTPGIINR 222
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ + + + K++ KELKPRT+++ +++ GL R D + S +
Sbjct: 223 HQMAHYVDKNDLKILTPKKELKPRTFQLNEAQTLYFGGLARFDYVKGGRTSF--VCYMPN 280
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L +H K ENA + EKH G L PP E +E+ V F + D DI
Sbjct: 281 ELNIHRTKLENADDLYEKHAGELLSPPSKEG-MEDFPPLVPHTFTI-----DQPKTDIVF 334
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW + G+ + V+ +GV + +R +L+
Sbjct: 335 SGLGWVTANDAGK-QIKVYAPKGVHVFMRRSLI 366
>gi|226311575|ref|YP_002771469.1| GTP-binding protein YqeH [Brevibacillus brevis NBRC 100599]
gi|226094523|dbj|BAH42965.1| GTP binding protein [Brevibacillus brevis NBRC 100599]
Length = 373
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 209/452 (46%), Gaps = 88/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ +Q + K PGY A ES
Sbjct: 9 CAGCGIAIQTADAKKPGY-------------------APESALG---------------- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGA-RSVVLM 202
K ++C RC+ ++HY +V V + D DF K++ G+ S+V+M
Sbjct: 34 -------RKVIICQRCYRIKHYNEVAPVG----MGDDDF-----LKILDGIGSTESLVVM 77
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF GS+ + + + V G P ++LV K+DLLP +++ R
Sbjct: 78 VVDIFDFQGSWLKGLPRFV----------------GKNP-ILLVGNKVDLLPRNINLNRV 120
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+W++ A+E G+ + + +SA K + L++ + +L R +V+ +G N GKST+
Sbjct: 121 RNWMQHEAKERGL-RPEDVVLISAQKGLHIDELLNRIGELRKGR-DVYIVGVTNVGKSTM 178
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I A +T +P PGTTL ++E L +FDTPG+++ +
Sbjct: 179 INRILHDYGAAE----------LEITTSPFPGTTLD--KIEIPLEDGRSIFDTPGIINRD 226
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
QI ++ + + + + + Y++ G S+ + GL R+D + V V Y
Sbjct: 227 QIGHMVSPTDLRKITPTSRINSKVYQLDDGQSLFLGGLARIDFVRGERQPFIVYVDNDLY 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+H K E A +++KH G L PP GE+ + L +V+ F ++ S+ + DI +
Sbjct: 287 --IHRTKLEKADEVMQKHHGTLLVPPTGEEAAKALPPFVKHTFKINKSTM---TTDIVIS 341
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW S++ K EA++ V +GV + +R L+
Sbjct: 342 GLGWVSIQGKHEASVVVHAPKGVSVGMRKGLI 373
>gi|315282397|ref|ZP_07870817.1| ribosome biogenesis GTPase YqeH [Listeria marthii FSL S4-120]
gi|313613949|gb|EFR87673.1| ribosome biogenesis GTPase YqeH [Listeria marthii FSL S4-120]
Length = 366
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 205/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY P +LN NE
Sbjct: 7 CIGCGAIIQTEDPDKIGY--APKSSLN-----------NEQ------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L+HY +++DV L D DF R L S +++++ V
Sbjct: 35 ----------VICKRCFRLKHYNEIQDVA----LTDDDF----LRILNQISSKQALIVYV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS+ + + +G+ P V+LV K D+LP SL +
Sbjct: 77 VDIFDFDGSWLPGLPRF----------------AGSNP-VLLVGNKEDVLPKSLKRDKLT 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R RA+E G++ T + VSA K G +L++ + +L + +V+ +G N GKSTL+
Sbjct: 120 RWMRTRAKEQGLAA-TDVVLVSAEKGHGFDTLLEKIDELRNGQ-DVYVVGCTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K E N++ T + PGTTL ++E L L DTPG+++ +Q
Sbjct: 178 NRIIKQASG-------ENNVI---TTSQFPGTTLD--KIEIPLADGNVLVDTPGIINHHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + K + KE+KP +++ ++ + L R+D +S+ V+ S L
Sbjct: 226 MAHFIDTNTLKAITPKKEIKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + E G LQPP E+ ++ L K V F V DI +G
Sbjct: 284 PIHRTKLEKAEALYENQAGLVLQPPT-EEGMKTLPKLVPYSFTV------KEKADIVFSG 336
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW ++ +G A + W EGV +R +L+
Sbjct: 337 LGWVTIP-EGGAKVTAWVPEGVSATIRTSLV 366
>gi|212638655|ref|YP_002315175.1| GTP-binding protein YqeH [Anoxybacillus flavithermus WK1]
gi|212560135|gb|ACJ33190.1| Predicted GTPase [Anoxybacillus flavithermus WK1]
Length = 372
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 189/382 (49%), Gaps = 48/382 (12%)
Query: 153 PVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS 212
P++C RC L+HY +V+DV+ L D DF + L A +V+ +VD DF+GS
Sbjct: 39 PIICQRCFRLKHYNEVQDVS----LTDDDFLNI----LHGIGQADGLVVKIVDIFDFNGS 90
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + + V GK V+LV K+DLLP S+ + W++Q ARE
Sbjct: 91 WLPGLHRFV-------------GKKD----VLLVGNKVDLLPKSVKHEKITRWMKQTARE 133
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + VSA K +G+K ++ +D +V+ +G N GKST +N I K
Sbjct: 134 LGLQP-RDVFLVSAHKGYGMKEVMT-AIDEYRNEKDVYVVGCTNVGKSTFINRIIKEA-T 190
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
G+G N++ T + PGTTL ++ + L + L+DTPG+++ +Q+ + +++
Sbjct: 191 GKG------NVI---TTSYFPGTTLDMIEIP--LDDGSALYDTPGIINHHQMAHFVDKKD 239
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K++ KE+KP+ Y++ ++ GL R+D S + S L +H K E+
Sbjct: 240 LKVITPKKEIKPKVYQLNEQQTLFFGGLARLDYVSGGRRSF--VCYMSNELFIHRTKREH 297
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A + E+H G LQPP + E+L V F + DI +GLGW +
Sbjct: 298 ADELYERHLGELLQPP-RKSYCEQLPPLVAHHF-----TLKEPKTDIVFSGLGWVTCHEP 351
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G + + EGV +VLR +L+
Sbjct: 352 GAQVIA-YVPEGVGVVLRKSLI 372
>gi|118586522|ref|ZP_01543965.1| GTP-binding protein [Oenococcus oeni ATCC BAA-1163]
gi|118433026|gb|EAV39749.1| GTP-binding protein [Oenococcus oeni ATCC BAA-1163]
Length = 497
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 203/439 (46%), Gaps = 88/439 (20%)
Query: 75 DEATPKLT---VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLK 131
D+ T L VC GCG Q T PGY NE + + L
Sbjct: 6 DQVTQLLNDGIVCIGCGARFQSTKRGVPGYL-------------------NEHKLCSYL- 45
Query: 132 KGGLVVFEAENETSEVKKHEKPV--VCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRK 189
S + + P+ +C RC L++Y +++ V FD DH +
Sbjct: 46 -------------SSLNSVDDPINLLCERCFKLKNYNQIEPVA-------FDSDH-FQKI 84
Query: 190 LMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTK 249
L S S +++VL +VD D GS + + + GN P VVLV K
Sbjct: 85 LTSISDKKALVLYLVDLFDVGGSMINGLTRFI----------------GNNP-VVLVGNK 127
Query: 250 IDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNV 309
D+LP S+ + +W+ + A+ +GI K+ K +SA K + L++++ D + +
Sbjct: 128 FDILPKSVKKNKIANWLTKEAKNEGI-KVLKTVVLSADKGDSGQYLLEEISDYIDEYEEI 186
Query: 310 WAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQ 369
+ +G N GKSTL+N I K + +GRG S +T + PGTTL ++E L +
Sbjct: 187 FVVGVTNVGKSTLINQIIKQI-SGRG---------SVITTSRFPGTTLD--KIEIPLTEK 234
Query: 370 AKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESS 429
++ DTPG++H +Q+ + ++ K + NKE+K RT ++ G +I +AGL +D S
Sbjct: 235 TRVIDTPGIIHDSQMAHFIDSKDFKYLLPNKEVKARTLQLSKGQAIFLAGLGWIDFLNKS 294
Query: 430 VESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSG 489
I VT + + LH GK ENA + GR L+P + ++E + +KE +
Sbjct: 295 --KISVTAYFENNIELHRGKIENAEKLFSSQAGRLLKPTV----LKEYRELEKKEIKLKA 348
Query: 490 SSWDSSSVDIAAAGLGWFS 508
+ D A +GLGWF+
Sbjct: 349 NQ------DFAISGLGWFT 361
>gi|389815855|ref|ZP_10207103.1| GTPase YqeH [Planococcus antarcticus DSM 14505]
gi|388465578|gb|EIM07894.1| GTPase YqeH [Planococcus antarcticus DSM 14505]
Length = 367
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 199/391 (50%), Gaps = 52/391 (13%)
Query: 145 SEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARS-VVLMV 203
S ++K E ++C RC L++Y +++ V+ L D DF ++++ G R +++ +
Sbjct: 28 SSLEKEE--IICQRCFRLKNYNELQPVS----LTDDDF-----LRILNGLGERDGLIVKI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V + ++L+ K DLLP S+ +
Sbjct: 77 VDIFDFNGSWLPGLHRFVGNN-----------------DILLIANKADLLPKSVKQHKLI 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
HW++Q AR+ G+ I L VSA K G+ ++ ++ K +V+ +G N GKST +
Sbjct: 120 HWMKQEARKLGLQPIDILT-VSAHKGTGIPEAME-AIEKYRKGKDVYVVGCTNVGKSTFI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + K + +++ T + PGTTL ++ + L + LFDTPG+++ +Q
Sbjct: 178 NRVIKQATG-------QADVI---TTSHFPGTTLDMIEIP--LDDKRSLFDTPGIINHHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L + K + KE+KPR +++ A ++ I GL R D + S TV + L
Sbjct: 226 LAHHLQTADLKQIMPKKEIKPRVFQLNAEQTLFIGGLARFDFIQGERSSF--TVHIANDL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K +NA + E+H G L PP E + ++ + VR EF S + DI +G
Sbjct: 284 PIHRTKLDNADALYEQHLGDMLAPPSAEYK-DDFPELVRHEF-----SIKEAKTDIVFSG 337
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +++ G A + +GV+++LR +L+
Sbjct: 338 LGWITIQ-HGNAVIAAHAPKGVEVLLRPSLI 367
>gi|23099443|ref|NP_692909.1| GTP-binding protein YqeH [Oceanobacillus iheyensis HTE831]
gi|22777672|dbj|BAC13944.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 366
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 207/452 (45%), Gaps = 90/452 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q + GY P +LNK
Sbjct: 5 ICQGCGAEIQTSEESEVGY--APPSSLNK------------------------------- 31
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
+ V+C RC L+HY +++DV + D DF V S +++
Sbjct: 32 ---------EIVLCKRCFRLKHYNEIQDVNIS----DDDFLQMVS----SIRDTDGLIVH 74
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
++D D DG+ + + ++ +G P ++LV K+DLLP S + +
Sbjct: 75 LIDIFDVDGTLLKSLPRI----------------TGANP-ILLVGNKLDLLPKSTNVNKL 117
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
++W+++ A + GI K+ + F+S+ K G+ SL + GK+ +V+ +G N GKST
Sbjct: 118 KNWLQREASQLGI-KVKDIAFISSKKGTGIDSLKQLIETYRGKK-DVFIVGTTNVGKSTF 175
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N + + GE I T + PGTTLG + + L + L DTPG+++
Sbjct: 176 INKLIEQ------STGEANAI----TTSYFPGTTLGFIEIP--LDERNVLVDTPGIVNKQ 223
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ ++ ++ K + NKE+K R Y+++ ++ I GL R+D + +S + S
Sbjct: 224 QMAHYVSDKDLKTITPNKEIKARVYQLQDQQTLFIGGLARLDFLKGEKQSF--VCYFSNE 281
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K E A + E H G L PP E V L ++V K F + + DI
Sbjct: 282 LSIHRTKLEKADALYEDHLGALLSPPDSES-VNNLPEFVGKTFKL-----NDEKTDIVFP 335
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW SV+ KG A + T++G+ I +R +L+
Sbjct: 336 GLGWISVQGKG-ATVQAHTWKGISITVRKSLI 366
>gi|309807137|ref|ZP_07701114.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LactinV
03V1-b]
gi|308166488|gb|EFO68690.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LactinV
03V1-b]
Length = 370
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 203/451 (45%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++QD + K GY P NK+
Sbjct: 8 CIGCGSILQDKDSKLSGYM--PHSAFNKM------------------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+++ + V C RC LRHY ++ V N DF R L S +++++ V
Sbjct: 35 ---IQEPDTSVYCQRCFRLRHYNEITPVNENN--DDF------LRLLNSLGNKKALIVNV 83
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+ S + + + D NE VLV K+DL P + ++ +
Sbjct: 84 VDLFDFNNSLITSLDRFIGD----NE-------------FVLVGNKVDLFPKNSKESKIK 126
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ A +G+ K+ +SA+K + LI+ + GK +++ +G N GKSTL+
Sbjct: 127 DWMRQEANRNGLFP-KKIFLLSAIKKRNIDELIN-YLATKGKNEDIYFVGTTNVGKSTLI 184
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI ++ E KN++ T + PGTTL +++ L L DTPG+L Q
Sbjct: 185 NAIIET-------RSEYKNLI---TTSKFPGTTLDSIKIP--LNEGHYLVDTPGILSKKQ 232
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ +RLT E +LV K+LKP TY++ G +I +AGL R+D + T++ + L
Sbjct: 233 MASRLTGSELELVAPKKQLKPATYQLLPGQTIFLAGLGRIDFIKGPASGF--TIYVARDL 290
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH KT NA KH L PP ++LG + + S S DI G
Sbjct: 291 YLHRTKTINADEFYLKHKSDLLNPPCDS---DDLGALKGQIYSTSEKS------DILFGG 341
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+G+ +V + +T EG+ + +R AL+
Sbjct: 342 VGFITV--TSGVVIKAYTPEGIGLGIRRALI 370
>gi|308174356|ref|YP_003921061.1| GTPase [Bacillus amyloliquefaciens DSM 7]
gi|307607220|emb|CBI43591.1| GTPase involved in ribosome 30S assembly [Bacillus
amyloliquefaciens DSM 7]
Length = 366
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 209/455 (45%), Gaps = 96/455 (21%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
VC GCGV +Q + K GY P +L K EN
Sbjct: 5 VCIGCGVTIQTEDKKGLGY--APKASLTK-----------------------------EN 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFD---HTVGRKLMSASGARSV 199
V+C RC L++Y +++DV+ L D DF HT+G S+
Sbjct: 34 -----------VICQRCFRLKNYNEIQDVS----LTDDDFLNILHTIG-------DTDSL 71
Query: 200 VLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSP 259
++ VVD DF+GS+ + + V G P ++LV K D+LP S+
Sbjct: 72 IVKVVDIFDFNGSWINGLNRFV----------------GGNP-IILVGNKADILPKSVKR 114
Query: 260 TRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGK 319
R W+++ A+E G+ + + +SA + G+K +ID + R +V+ +G N GK
Sbjct: 115 ERLVQWMKREAKEYGLKPL-DVFLISASRGQGMKEVIDAIEHYREGR-DVYVVGCTNVGK 172
Query: 320 STLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLL 379
ST +N I K V E+NI+ T + PGTTL + + L + L+DTPG++
Sbjct: 173 STFINRIIKEVSG-------EENII---TTSQFPGTTLDAIEIP--LDDGSALYDTPGII 220
Query: 380 HPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWA 439
+ +Q+ + + + K++ KELKPRT+++ +++ GL R D S + +
Sbjct: 221 NHHQMAHYVDKRDLKVLTPKKELKPRTFQLNEKQTLYFGGLARFDY--VSGDKTAFVCYM 278
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
L +H K ENA + EKH G L PP G+ ++E + F + DI
Sbjct: 279 PNELMIHRTKLENADALYEKHAGELLTPP-GKDHLDEFPELTAHTFTIK-----EGKTDI 332
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +V+ + + + + +GV + +R +L+
Sbjct: 333 VFSGLGWVTVQ-QADKKITAYAPKGVHVFVRRSLI 366
>gi|406659581|ref|ZP_11067719.1| ribosome biogenesis GTPase YqeH [Streptococcus iniae 9117]
gi|405577690|gb|EKB51838.1| ribosome biogenesis GTPase YqeH [Streptococcus iniae 9117]
Length = 372
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 204/453 (45%), Gaps = 88/453 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q N + GY P+ ++K GL E
Sbjct: 6 CIGCGVEIQSDNKEKMGY--TPTAAIDK----------------------GLAAGE---- 37
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ C RC LRHY ++ DV + D + L + ++V+ V
Sbjct: 38 ----------LYCQRCFRLRHYNEITDVHIS--------DDEFLKLLHEVGDSDALVVNV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+GS +++ VS GN V+LV K D+LP S+ +
Sbjct: 80 IDIFDFNGSVIPGLSRFVS---------------GN--DVLLVGNKKDILPKSVKDGKVS 122
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ +RA E+G+ + + SA + +K LI+ + L R +V+ +G N GKSTL+
Sbjct: 123 QWLIERAHEEGLRPVDVI-LTSAQNKYAIKELIEKINQLRKGR-DVYVVGVTNVGKSTLI 180
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + V GD E +T + PGTTL ++E L +FDTPG++H +Q
Sbjct: 181 NAIIQEV----SGDKEV------ITTSRFPGTTLD--KIEIPLDDGTFIFDTPGIIHRHQ 228
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ LT ++ K+V+ +KE+KP+TY++ ++ GL R D + I T + L
Sbjct: 229 MAHYLTDKDLKIVSPSKEIKPKTYQLNPEQTLFFGGLGRFDFISGQRQGI--TAYFDNNL 286
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K E A KH G L PP E++ + V EF V +D+ +G
Sbjct: 287 DLHRTKLEKADEFYLKHLGGLLTPPNMEQK-NKFPALVPYEFVV------KDKIDLVFSG 339
Query: 504 LGWFSVRLKGEAALGV--WTYEGVDIVLRNALL 534
LGW + + + V W GV +V+R A++
Sbjct: 340 LGWIKINGSKDNVVKVAGWAPNGVSVVIRKAII 372
>gi|323490035|ref|ZP_08095256.1| GTPase YqeH [Planococcus donghaensis MPA1U2]
gi|323396331|gb|EGA89156.1| GTPase YqeH [Planococcus donghaensis MPA1U2]
Length = 367
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 212/456 (46%), Gaps = 92/456 (20%)
Query: 80 KLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFE 139
++ C GCGV +Q N + GY P +L K
Sbjct: 3 EMPTCIGCGVQIQTENKEEVGY--APPSSLEK---------------------------- 32
Query: 140 AENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARS- 198
+ ++C RC L++Y +++ V+ L D DF ++++ G R
Sbjct: 33 ------------EEIICQRCFRLKNYNELQPVS----LTDDDF-----LRILNGLGERDG 71
Query: 199 VVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLS 258
+++ +VD DF+GS+ + + V + ++L+ K DLLP S+
Sbjct: 72 LIVKIVDIFDFNGSWLPGLHRFVGNN-----------------DILLIANKADLLPKSVK 114
Query: 259 PTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAG 318
+ HW++Q AR+ G+ I L VSA + G+ ++ ++ K +V+ +G N G
Sbjct: 115 QHKLIHWMKQEARKLGLQPIDVLT-VSAHRGTGVPEAME-AIEKYRKGKDVYVVGCTNVG 172
Query: 319 KSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGL 378
KST +N + K + +++ T + PGTTL ++ + L + LFDTPG+
Sbjct: 173 KSTFINRVIKQATG-------QSDVI---TTSHFPGTTLDMIEIP--LDDKRSLFDTPGI 220
Query: 379 LHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVW 438
++ +Q+ L + K + KE+KPR +++ A ++ + GL R D + S TV
Sbjct: 221 INHHQLAHHLKTADLKQIMPKKEIKPRVFQLNAEQTLFVGGLARFDFIKGERSSF--TVH 278
Query: 439 ASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVD 498
+ LP+H K ENA + E+H G L PP E + +E + VR EF S + D
Sbjct: 279 IANDLPIHRTKLENADALYEQHLGDMLAPPSAEYK-DEFPELVRHEF-----SIKDAKTD 332
Query: 499 IAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
I +GLGW +++ G A + +GV+++LR +L+
Sbjct: 333 IVFSGLGWITIQ-HGNAVVAAHAPKGVEVLLRPSLI 367
>gi|335357147|ref|ZP_08549017.1| GTPase YqeH [Lactobacillus animalis KCTC 3501]
Length = 371
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 199/451 (44%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q + PGY P + K GL E
Sbjct: 9 CIGCGAKIQSEDKAEPGY--TPQAAIQK----------------------GL-------E 37
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
SE+ C RC LRHY +V DV+ L D DF R L ++++ V
Sbjct: 38 NSEL-------YCQRCFRLRHYNEVADVS----LTDDDF----LRLLNQIGQTDALIVNV 82
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS + + V D V+LV K DLLP SL ++ +
Sbjct: 83 VDIFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKEDLLPHSLKRSKIK 125
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ A + G+ + + SA + L+ L++ ++D + +V+ +G N GKSTL+
Sbjct: 126 DWMRQEANKQGLRPV-DVALTSAKRGKDLEDLLE-LIDKYREGRDVYVVGVTNVGKSTLI 183
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I + + +T + PGTTL R+E L DTPG++H +Q
Sbjct: 184 NRIIN----------QTTGVKDLITTSRFPGTTLD--RIEIPFGDGHFLIDTPGIIHKHQ 231
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ + +L KE+KP+ Y++ G ++ L R D + V V+ L
Sbjct: 232 MAHYLSPKALRLAAPQKEIKPKVYQLNEGQTLFFGALARFDYISGGKQG--VIVYTDNNL 289
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTE A KH G L PP E+ +++ K VR EF + S D+ AG
Sbjct: 290 MIHRTKTEKATEFYAKHAGTLLTPPTAEE-MKDFPKLVRFEFKTTEKS------DLVFAG 342
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V K + + W EGV ++LR A++
Sbjct: 343 LGWVTV--KANSVVAGWAPEGVAVILRRAMV 371
>gi|259500527|ref|ZP_05743429.1| GTP-binding protein [Lactobacillus iners DSM 13335]
gi|302191217|ref|ZP_07267471.1| GTP-binding protein YqeH [Lactobacillus iners AB-1]
gi|325912153|ref|ZP_08174551.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners UPII 143-D]
gi|259167911|gb|EEW52406.1| GTP-binding protein [Lactobacillus iners DSM 13335]
gi|325476103|gb|EGC79271.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners UPII 143-D]
Length = 370
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 203/451 (45%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++QD + K GY P NK+
Sbjct: 8 CIGCGSILQDKDSKLSGYM--PHSAFNKM------------------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+++ + V C RC LRHY ++ V N DF R L S +++++ V
Sbjct: 35 ---IQEPDTSVYCQRCFRLRHYNEITPVNENN--DDF------LRLLNSLGNKKALIVNV 83
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+ S + + + D NE VLV K+DL P + ++ +
Sbjct: 84 VDLFDFNNSLITSLDRFIGD----NE-------------FVLVGNKVDLFPKNSKESKIK 126
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ A +G+ K+ +SA+K + LI+ + GK +++ +G N GKSTL+
Sbjct: 127 DWMRQEANRNGLFP-KKIFLLSAIKKRNIDELIN-YLATKGKNEDIYFVGTTNVGKSTLI 184
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI ++ E KN++ T + PGTTL +++ L L DTPG+L Q
Sbjct: 185 NAIIET-------RSEYKNLI---TTSKFPGTTLDSIKIP--LNEGHYLVDTPGILSKKQ 232
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ +RLT E +LV K+LKP TY++ G +I +AGL R+D + T++ + L
Sbjct: 233 MASRLTGSELELVAPKKQLKPATYQLLPGQTIFLAGLGRIDFIKGPASGF--TIYVARDL 290
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH KT NA KH L PP ++LG + + S S DI G
Sbjct: 291 YLHRTKTINADEFYLKHKSDLLNPPCDN---DDLGALKGQLYSTSEKS------DILFGG 341
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+G+ +V + +T EG+ + +R AL+
Sbjct: 342 VGFITV--PSGVVIKAYTPEGIGLGIRRALI 370
>gi|345020328|ref|ZP_08783941.1| GTPase YqeH [Ornithinibacillus scapharcae TW25]
Length = 366
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 194/427 (45%), Gaps = 91/427 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q NP+ GY P +L E EN
Sbjct: 6 CMGCGVEVQTDNPEGLGY--TPKSSL-----------------------------EKEN- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARS-VVLM 202
++C RC L+HY +++DV++ D DF K++S+ R +V+
Sbjct: 34 ----------ILCKRCFRLKHYNEIQDVSIH----DDDF-----LKMVSSIRDREGLVVH 74
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
++D D +G+ + + ++V D ++LV K+DLLP S + +
Sbjct: 75 IIDIFDVNGTMIKSLPRIVGDNP-----------------IILVGNKMDLLPKSTNQNKL 117
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R A+E G+ K+ + +S+VK +G++ L + + + +V+ +G N GKST
Sbjct: 118 VQWLRSSAKEIGL-KVQDVFLISSVKGFGIEELTSQI-EYYRENKDVFIVGTTNVGKSTF 175
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N + K GE I T + PGTTLG + + L A L DTPG+++
Sbjct: 176 INRLIKQ------SIGESDVI----TTSYFPGTTLGFIEIP--LDDDAALIDTPGIVNQE 223
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
QI ++ ++ K+V KE+KPR Y++ ++ GL R+D + +S + S
Sbjct: 224 QIAHYISDKDLKIVTPTKEIKPRVYQLNPQQTLFFGGLARLDFIKGDRQSF--VCYFSNQ 281
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
LP+H K E A + E H G L PP E+ ++ L + F + G DI
Sbjct: 282 LPIHRTKLEKADELYENHVGELLSPP-DEESIKLLPEMTSSAFKLQG-----EKTDIVFP 335
Query: 503 GLGWFSV 509
GLGW +V
Sbjct: 336 GLGWVTV 342
>gi|300767171|ref|ZP_07077083.1| ribosome biogenesis GTPase YqeH [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308180390|ref|YP_003924518.1| ribosome biogenesis GTPase YqeH [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|418275051|ref|ZP_12890463.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448821057|ref|YP_007414219.1| Ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
ZJ316]
gi|300494990|gb|EFK30146.1| ribosome biogenesis GTPase YqeH [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308045881|gb|ADN98424.1| ribosome biogenesis GTPase YqeH [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|376009522|gb|EHS82850.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448274554|gb|AGE39073.1| Ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
ZJ316]
Length = 378
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 204/463 (44%), Gaps = 88/463 (19%)
Query: 76 EATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGL 135
E + + C GCG +Q T+PK GY P+ L K
Sbjct: 3 ETSEETLYCIGCGAAIQTTDPKAAGY--TPNSALQK------------------------ 36
Query: 136 VVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG 195
+ + + C RC LRHY ++ V L D DF H L +
Sbjct: 37 ----------SLASDAQDLYCQRCFRLRHYNEIVPVG----LTDDDFRHL----LATIRD 78
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS 255
A ++V+ VVD D +GS + + V D V+LV K D+LP
Sbjct: 79 ANALVVYVVDIFDLNGSIIPGLQRFVGDNP-----------------VLLVGNKEDVLPR 121
Query: 256 SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG-NVWAIGA 314
L T+ W+ Q+ R GI + + SA K + L+ + +RG +V+ +G
Sbjct: 122 QLRRTKLREWMNQQVRAQGIKPV-DVALTSAKKGHSIDELLAMIEKY--RRGRDVYVVGV 178
Query: 315 QNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFD 374
N GKSTL+N I + + +T + PGTTL ++E L + D
Sbjct: 179 TNVGKSTLINRIIAN----------NTGLKDLITTSRFPGTTLD--KIEIPLDDGHMMVD 226
Query: 375 TPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIY 434
TPG++HP Q+ L+ ++ KLV+ +E++P+ +++ G ++ + G+ R+D+ ++ +
Sbjct: 227 TPGIIHPEQMAHVLSGDDLKLVSPQREIRPKGFQLGNGQTLFLGGVARLDIVDTLKAT-- 284
Query: 435 VTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDS 494
TV+ L LH +TENA KH G + PP G+ V + VR EF V+ S
Sbjct: 285 GTVYVDNNLTLHRTRTENADNFYTKHVGELITPPTGDA-VADFPPLVRHEFKVTEIS--- 340
Query: 495 SSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYR 537
DI GLGW +V + + W +GV ++ R A++ R
Sbjct: 341 ---DIVFEGLGWVTV--AADTRVAAWAPKGVAVLTRPAMINKR 378
>gi|389571867|ref|ZP_10161955.1| ribosome biogenesis GTPase YqeH [Bacillus sp. M 2-6]
gi|388428353|gb|EIL86150.1| ribosome biogenesis GTPase YqeH [Bacillus sp. M 2-6]
Length = 366
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 195/381 (51%), Gaps = 48/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L++Y +++DV+ L + DF + L S S+++ VVD DF+GS+
Sbjct: 34 VICQRCFRLKNYNEIQDVS----LTEDDFLNI----LHSIGETDSLIVKVVDIFDFNGSW 85
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
++++V G P ++LV K+D+LP S+ R W+++ A+E+
Sbjct: 86 INGLSRIV----------------GGNP-ILLVGNKVDILPKSVKKDRLVQWMKREAKEN 128
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G++ I + +SA + G+ +++ +D + NV+ +G N GKST +N I K V
Sbjct: 129 GLNPI-DVFLISASRGQGVPEVME-AIDHYREGRNVYVVGCTNVGKSTFINRIIKEVSG- 185
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
E+N++ T + PGTTL + + L + LFDTPG+++ +Q+ + + +
Sbjct: 186 ------EENVI---TTSQYPGTTLDAIEIP--LDDGSALFDTPGIINRHQMAHYVGKNDL 234
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
K++ KELKPRT+++ +++ GL R D + S + L +H K ENA
Sbjct: 235 KILTPKKELKPRTFQLNEAQTLYFGGLARFDYVKGGRTSF--VCYMPNELNIHRTKLENA 292
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ EKH G L PP E +E+ V F + D +DI +GLGW + G
Sbjct: 293 DELYEKHAGELLSPPSKEG-MEDFPPLVPHTFTI-----DQPKMDIVFSGLGWVTANDAG 346
Query: 514 EAALGVWTYEGVDIVLRNALL 534
+ + V+ +GV + +R +L+
Sbjct: 347 K-QIKVYAPKGVHVFMRRSLI 366
>gi|421186412|ref|ZP_15643805.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB418]
gi|399967365|gb|EJO01847.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB418]
Length = 385
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 203/439 (46%), Gaps = 88/439 (20%)
Query: 75 DEATPKLT---VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLK 131
D+ T L VC GCG Q T PGY NE + + L
Sbjct: 6 DQVTQLLNDGIVCIGCGARFQSTKRGVPGYL-------------------NEHKLCSYL- 45
Query: 132 KGGLVVFEAENETSEVKKHEKPV--VCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRK 189
S + + P+ +C RC L++Y +++ V FD DH +
Sbjct: 46 -------------SSLNSVDDPINLLCERCFKLKNYNQIEPVA-------FDSDH-FQKI 84
Query: 190 LMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTK 249
L S S +++VL +VD D GS + + + GN P VVLV K
Sbjct: 85 LTSISDKKALVLYLVDLFDVGGSMINGLTRFI----------------GNNP-VVLVGNK 127
Query: 250 IDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNV 309
D+LP S+ + +W+ + A+ +GI K+ K +SA K + L++++ D + +
Sbjct: 128 FDILPKSVKKNKIANWLTKEAKNEGI-KVLKTVVLSADKGDSGQYLLEEISDYIDEYEEI 186
Query: 310 WAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQ 369
+ +G N GKSTL+N I K + +GRG S +T + PGTTL ++E L +
Sbjct: 187 FVVGVTNVGKSTLINQIIKQI-SGRG---------SVITTSRFPGTTLD--KIEIPLTEK 234
Query: 370 AKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESS 429
++ DTPG++H +Q+ + ++ K + NKE+K RT ++ G +I +AGL +D S
Sbjct: 235 TRVIDTPGIIHDSQMAHFIDSKDFKYLLPNKEVKARTLQLSKGQAIFLAGLGWIDFLNKS 294
Query: 430 VESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSG 489
I VT + + LH GK ENA + GR L+P + ++E + +KE +
Sbjct: 295 --KISVTAYFENNIELHRGKIENAEKLFSSQAGRLLKPTV----LKEYRELEKKEIKLKA 348
Query: 490 SSWDSSSVDIAAAGLGWFS 508
+ D A +GLGWF+
Sbjct: 349 NQ------DFAISGLGWFT 361
>gi|312871750|ref|ZP_07731838.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 3008A-a]
gi|329920071|ref|ZP_08276902.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners SPIN 1401G]
gi|311092692|gb|EFQ51048.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 3008A-a]
gi|328936525|gb|EGG32969.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners SPIN 1401G]
Length = 370
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 203/451 (45%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++QD + K GY P NK+
Sbjct: 8 CIGCGSILQDKDSKLSGYM--PHSAFNKM------------------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+++ + V C RC LRHY ++ V N DF R L S +++++ V
Sbjct: 35 ---IQEPDTSVYCQRCFRLRHYNEITPVNENN--DDF------LRLLNSLGNKKALIVNV 83
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+ S + + + D NE VLV K+DL P + ++ +
Sbjct: 84 VDLFDFNNSLIASLDRFIGD----NE-------------FVLVGNKVDLFPKNSKESKIK 126
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ A +G+ K+ +SA+K + LI+ + GK +++ +G N GKSTL+
Sbjct: 127 DWMRQEANRNGLFP-KKIFLLSAIKKRNIDELIN-YLATKGKNEDIYFVGTTNVGKSTLI 184
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI ++ E KN++ T + PGTTL +++ L L DTPG+L Q
Sbjct: 185 NAIIET-------RSEYKNLI---TTSKFPGTTLDSIKIP--LNEGHYLVDTPGILSKKQ 232
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ +RLT E +LV K+LKP TY++ G +I +AGL R+D + T++ + L
Sbjct: 233 MASRLTGSELELVAPKKQLKPATYQLLPGQTIFLAGLGRIDFIKGPASGF--TIYVARDL 290
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH KT NA KH L PP ++LG + + S S DI G
Sbjct: 291 YLHRTKTINADEFYLKHKSDLLNPPCDS---DDLGALKGQLYSTSEKS------DILFGG 341
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+G+ +V + +T EG+ + +R AL+
Sbjct: 342 VGFITV--PSGVVIKAYTPEGIGLGIRRALI 370
>gi|116511050|ref|YP_808266.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris SK11]
gi|116106704|gb|ABJ71844.1| Predicted GTPase [Lactococcus lactis subsp. cremoris SK11]
Length = 401
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 141/466 (30%), Positives = 211/466 (45%), Gaps = 85/466 (18%)
Query: 75 DEATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGG 134
+E T + C GCG +Q + G+ P+ L K +A +
Sbjct: 14 NENTMEDLYCIGCGAKIQTEDKNALGFL--PAGALKK-------KIAERDQME------- 57
Query: 135 LVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSAS 194
+A +E SE + + C RC LRHY ++ + L D DF R L
Sbjct: 58 --AVQAGDEGSEAFVKNEDLYCQRCFRLRHYNEIAPTS----LTDADF----LRLLKEIG 107
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
++++ VVD DF+GS + K+ GN +++V K D+LP
Sbjct: 108 QHNALIVNVVDIFDFNGSLIPNLHKLTG---------------GN--DLLMVANKRDVLP 150
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAG-----KRG-N 308
SL + W+R++A G+ K V++ +N DDV +L +RG +
Sbjct: 151 KSLKVGKMTAWLREQAASRGLK--PKDILVTSAQNK------DDVAELMEAIEHYRRGRD 202
Query: 309 VWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPA 368
V+ +G N GKSTL+NAI KS G E I T + PGTTL ++E L
Sbjct: 203 VYVVGVTNVGKSTLINAIIKS------ASGSEDVI----TTSRFPGTTLD--KIEIPLDE 250
Query: 369 QAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEES 428
+ L DTPG++H Q+ L E+ K V+ KE+KP+TY++ ++ GL R D
Sbjct: 251 DSALIDTPGIIHRGQMAHYLEPEDLKYVSPRKEIKPKTYQLNPEQTLFFGGLARFDF--I 308
Query: 429 SVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVS 488
S E +T + + +H K E A EKH G L P + K VR+EF ++
Sbjct: 309 SGERQGMTAYFDNEINVHRTKLEGATEFYEKHKGELLAPALVG------AKLVRREFKIT 362
Query: 489 GSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
S DI +GLGW VR+ +A + W EGVD+V+R AL+
Sbjct: 363 DKS------DIVFSGLGW--VRVPQKAVVAAWVPEGVDVVVRKALI 400
>gi|311069170|ref|YP_003974093.1| GTP-binding protein YqeH [Bacillus atrophaeus 1942]
gi|419820180|ref|ZP_14343793.1| GTPase YqeH [Bacillus atrophaeus C89]
gi|310869687|gb|ADP33162.1| GTP-binding protein YqeH [Bacillus atrophaeus 1942]
gi|388475692|gb|EIM12402.1| GTPase YqeH [Bacillus atrophaeus C89]
Length = 366
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 192/381 (50%), Gaps = 48/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L++Y +++DV+ L D DF + L S+++ +VD DF+GS+
Sbjct: 34 VICQRCFRLKNYNEIQDVS----LTDDDFLNI----LHGIGETDSLIVKIVDIFDFNGSW 85
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ ++V G P ++LV K D+LP SL R W+++ A+E
Sbjct: 86 INGLNRLV----------------GGNP-ILLVGNKADILPKSLKRERLIQWMKREAKEY 128
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ + + VSA + G+K +ID + R +V+ +G N GKST +N I K V
Sbjct: 129 GLKPL-DVFLVSASRGQGIKEVIDAIEHYRQGR-DVYVVGCTNVGKSTFINRIIKEVSG- 185
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
E+NI+ T + PGTTL + + L + L+DTPG+++ +Q+ + + +
Sbjct: 186 ------EENII---TTSQFPGTTLDAIEIP--LDDGSALYDTPGIINRHQMAHYVNKRDL 234
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
K++ KELKPRT+++ +++ GL R D S S +V + L +H K ENA
Sbjct: 235 KVLTPKKELKPRTFQLNDQQTLYFGGLARFDY-VSGARSAFVCYMPNDLL-IHRTKLENA 292
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ EKH G L PP G+ ++E + F + DI +GLGW +V+ +
Sbjct: 293 DALYEKHAGELLTPP-GKDDMDEFPELTAHTFTIK-----EPKTDIVFSGLGWVTVQ-EA 345
Query: 514 EAALGVWTYEGVDIVLRNALL 534
E + + +GV + +R +L+
Sbjct: 346 EKKITAYAPKGVHVFVRRSLI 366
>gi|309810198|ref|ZP_07704043.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners SPIN
2503V10-D]
gi|312872993|ref|ZP_07733053.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2062A-h1]
gi|312874210|ref|ZP_07734244.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2052A-d]
gi|312875587|ref|ZP_07735588.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2053A-b]
gi|325912587|ref|ZP_08174970.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners UPII 60-B]
gi|308169470|gb|EFO71518.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners SPIN
2503V10-D]
gi|311088841|gb|EFQ47284.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2053A-b]
gi|311090280|gb|EFQ48690.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2052A-d]
gi|311091515|gb|EFQ49899.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2062A-h1]
gi|325478008|gb|EGC81137.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners UPII 60-B]
Length = 370
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 203/451 (45%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++QD + K GY P NK+
Sbjct: 8 CIGCGSILQDKDSKLSGYM--PHSAFNKM------------------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+++ + V C RC LRHY ++ V N DF R L S +++++ V
Sbjct: 35 ---IQEPDTSVYCQRCFRLRHYNEITPVNENN--DDF------LRLLNSLGNKKALIVNV 83
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+ S + + + D NE VLV K+DL P + ++ +
Sbjct: 84 VDLFDFNNSLITSLDRFIGD----NE-------------FVLVGNKVDLFPKNSKESKIK 126
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ A +G+ K+ +SA+K + LI+ + GK +++ +G N GKSTL+
Sbjct: 127 DWMRQEANRNGLFP-KKIFLLSAIKKRNIDELIN-YLATKGKNEDIYFVGTTNVGKSTLI 184
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI ++ E KN++ T + PGTTL +++ L L DTPG+L Q
Sbjct: 185 NAIIET-------RSEYKNLI---TTSKFPGTTLDSIKIP--LNEGHYLVDTPGILSKKQ 232
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ +RLT E +LV K+LKP TY++ G +I +AGL R+D + T++ + L
Sbjct: 233 MASRLTGSELELVAPKKQLKPATYQLLPGQTIFLAGLGRIDFIKGPASGF--TIYVARDL 290
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH KT NA KH L PP ++LG + + S S DI G
Sbjct: 291 YLHRTKTINADEFYLKHKSDLLNPPCDS---DDLGALKGQIYSTSEKS------DILFGG 341
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+G+ +V + +T EG+ + +R AL+
Sbjct: 342 VGFITV--PSGVVIKAYTPEGIGLGIRRALI 370
>gi|379727858|ref|YP_005320043.1| GTP-binding protein YqeH [Melissococcus plutonius DAT561]
gi|376318761|dbj|BAL62548.1| GTP-binding protein YqeH [Melissococcus plutonius DAT561]
Length = 369
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 204/451 (45%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q PK GY + ++ +KG
Sbjct: 7 CIGCGAVIQTETPKKLGYLPK-----------------------SAYEKG---------- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
K ++ + C RC LRHY +++ V + N DF R L + ++++ +
Sbjct: 34 -----KEKQEIYCQRCFRLRHYNEIQSVDLTN--DDF------LRLLNELNKEDALIINL 80
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS +++ V GN P ++L+ K D+LP SL +
Sbjct: 81 VDIFDFDGSLISSLSRFV----------------GNNP-ILLIGNKRDILPKSLKKHKLI 123
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+++RA ++G+ I + +SA + L++ + R +V+ +G N GKSTL+
Sbjct: 124 KWMKERAYDEGLRPID-IQLISAKNPSEIVELLETIEYYRNGR-DVYIVGVTNVGKSTLI 181
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K GEE+ I T + PGTTL +++ L L DTPG++H +Q
Sbjct: 182 NQIIKQTS------GEEEVI----TTSQFPGTTLDKIKIP--LADGQFLIDTPGIIHHHQ 229
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L ++E K + KE+KP+ Y++ AG + G+ R D S ++ A+ L
Sbjct: 230 MAHYLGKKELKKIMPQKEIKPKIYQLNAGQILFFGGMARFDFIMGDRNS-FIAYLAND-L 287
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K NA KH G L+PP +K V + VR EF + S DI +G
Sbjct: 288 TIHRTKMANADAFYGKHLGGLLEPP-NQKEVAGFPELVRYEFSIKEKS------DIVFSG 340
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V G A W +GV ++ R AL+
Sbjct: 341 LGWITVTSPGIVA--GWAPKGVSVLKRKALI 369
>gi|410460447|ref|ZP_11314125.1| GTPase YqeH [Bacillus azotoformans LMG 9581]
gi|409927062|gb|EKN64208.1| GTPase YqeH [Bacillus azotoformans LMG 9581]
Length = 369
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 194/382 (50%), Gaps = 49/382 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
++C RC L+HY +++DV+ L D DF K+++ G + ++V+ +VD DF+GS
Sbjct: 36 LICQRCFRLKHYNEIQDVS----LTDDDF-----LKILNGIGDSDALVVKIVDIFDFNGS 86
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + + V GK+ +V+LV K+DLLP S+ ++ HW++ A +
Sbjct: 87 WLPGLHRFV-------------GKN----KVLLVGNKVDLLPKSVKNSKLIHWMKYSASQ 129
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ K ++ +SA K G++ L +D + NV+ +G N GKST +N I K
Sbjct: 130 LGL-KPKDVYLISAAKGEGVQELAA-AIDFHREGKNVYVVGCTNVGKSTFINKIIKEFS- 186
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
G +++ T + PGTTL ++ + L LFDTPG+++ +Q+ + +
Sbjct: 187 -----GVTDDVI---TTSQFPGTTLDLIDIP--LDDGTSLFDTPGIINHHQMAHFVNEKG 236
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K+++ KE+KPR +++ G +++ GL R D +S T + S L +H K E
Sbjct: 237 LKMISPRKEIKPRVFQLNEGQTLYFGGLARFDYISGGRKSF--TCYVSNELNIHRTKLEK 294
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A + E H G L PP E+ V+E V++EF + + DI GLGW +
Sbjct: 295 ADKLYEDHVGELLFPPF-EEEVKEFPPLVKQEFMIR-----EAKTDIVFHGLGWVTCNEP 348
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + +GV + +R +L+
Sbjct: 349 G-AKIVAHVPKGVGVTIRQSLI 369
>gi|365850841|ref|ZP_09391295.1| ribosome biogenesis GTPase YqeH [Lactobacillus parafarraginis
F0439]
gi|363718090|gb|EHM01445.1| ribosome biogenesis GTPase YqeH [Lactobacillus parafarraginis
F0439]
Length = 378
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 175/381 (45%), Gaps = 49/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V C RC LRHY ++ V+ L D DF + L S S S++L VVD D +GS
Sbjct: 47 VYCQRCFRLRHYNEIAPVS----LSDDDF----LKLLTSISATDSLILYVVDIFDVNGSM 98
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V D V+LV K+D+LP SL + W+RQ+A
Sbjct: 99 ISGLHRFVGDNP-----------------VILVGNKLDVLPKSLKKRKVRDWLRQQANAA 141
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
GI I + +SA N+ + L+D + + +V+ +G N GKSTL+N I +
Sbjct: 142 GIRPI-DVELISAKTNYDVDHLLDQIEKYRNGK-DVYVVGVTNVGKSTLINGIIR----- 194
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
+ I +T + PGTTL R++ L L DTPG++ P Q+ L +E
Sbjct: 195 -----QSTGIKELITTSRFPGTTLD--RIDIPLDDGHSLVDTPGIIQPEQMAHHLVGKEL 247
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
LV K +KP+ Y++ ++ AG+ R D + TV+A L LH K ENA
Sbjct: 248 NLVTPQKTIKPKGYQLNPAQTLFFAGVARFDYVTGDDREGF-TVYAENNLYLHRTKLENA 306
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ H G L PP E+R + R EF + S D+ GLGW +V
Sbjct: 307 DSFYADHLGGLLNPP-SEERKADFPALERHEFKTTQKS------DVVLEGLGWVTV--PA 357
Query: 514 EAALGVWTYEGVDIVLRNALL 534
+ W +GV ++LR A++
Sbjct: 358 GVVVAGWAPKGVAVLLRPAMI 378
>gi|116630032|ref|YP_815204.1| GTP-binding protein YqeH [Lactobacillus gasseri ATCC 33323]
gi|311110338|ref|ZP_07711735.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri MV-22]
gi|116095614|gb|ABJ60766.1| Predicted GTPase [Lactobacillus gasseri ATCC 33323]
gi|311065492|gb|EFQ45832.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri MV-22]
Length = 369
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 206/453 (45%), Gaps = 92/453 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++QD +PK GY P+ L K S +NE
Sbjct: 7 CIGCGSILQDQDPKKSGYL--PTSALKKALTSD------------------------DNE 40
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V C RC LRHY ++ V N DF L S S +++V+ V
Sbjct: 41 ----------VYCQRCFRLRHYNEIMPVEENN--DDF------LALLNSISQKKALVVNV 82
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF S + + + GN +LVV K+DL P + ++ +
Sbjct: 83 VDLFDFSNSLISSIKRFIG---------------GN--EYILVVNKVDLFPKNSKESKIK 125
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLA--GKRGNVWAIGAQNAGKST 321
W+RQ A +G+ K K+ VSA K K+L D + LA G++ +++ +G N GKST
Sbjct: 126 DWMRQEANRNGL-KPEKIFLVSAAKK---KNLADLMAFLAKKGEKKDIYFVGTTNVGKST 181
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + K+++ T + PGTTL +++ L L DTPG+L+
Sbjct: 182 LINAIINM-------NSDLKDVI---TTSKFPGTTLDEIKIP--LSNGHYLIDTPGILNA 229
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
NQ+ + L+ +E ++V K LKP TY++ G +I +AGL R D + T++ +
Sbjct: 230 NQLASHLSGKELEVVEPKKPLKPATYQLLPGQTIFLAGLGRFDYVDGPSSGF--TIYVAR 287
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L +H KTENA T EKH L PP + + LG + F S DI
Sbjct: 288 DLYVHRTKTENADTFYEKHKDDLLLPP---SKDDCLGPLKGQTFSPKEKS------DILF 338
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
G+G+ + + +T EG+ + +R AL+
Sbjct: 339 GGVGFITT--PANVVVKAYTPEGIGLGIRRALI 369
>gi|433448806|ref|ZP_20411671.1| GTPase YqeH [Weissella ceti NC36]
gi|429539195|gb|ELA07232.1| GTPase YqeH [Weissella ceti NC36]
Length = 380
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 205/452 (45%), Gaps = 89/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+Q T + GY P ++L+KG FE E
Sbjct: 17 CIGCGALIQTTESEELGY--TPM---------------------SALRKG----FENEE- 48
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGA-RSVVLM 202
++C RC LRHY +++ V+ L D DF R+L+ G+ S+V+
Sbjct: 49 ----------ILCQRCFRLRHYNEIQPVS----LTDDDF-----RRLLDQIGSTNSLVVY 89
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF GS + + V G P ++LV KID+LP SL ++
Sbjct: 90 VMDVFDFSGSLIPGIHRFV----------------GKNP-ILLVGNKIDVLPKSLRRSKI 132
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+RQ+A G+ I + S L +L+D + R +V+ +G N GKST+
Sbjct: 133 KDWMRQQANIAGLRPI-DIALTSGRTGDDLPALMDLIEKYREGR-DVYVVGVTNVGKSTM 190
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K V G++ +++ T + PGTTL R+E L + + DTPG++H +
Sbjct: 191 INQIIKDVT------GDQNDVI---TTSRFPGTTLD--RIEIPLDDDSAIIDTPGIIHQD 239
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ ++ K V KELKPRTY++ ++ + L R D + + T +
Sbjct: 240 QMAHYLSPKDLKYVTPQKELKPRTYQLNPEQTLFMGALARFDYVQGAKGGF--TAYFDNN 297
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K E A KH G L PP E + +L R EF + DI
Sbjct: 298 LMIHRTKLEKAEDFYAKHAGELLAPPSAE-HLADLPPLQRHEFKT------TQKTDIVID 350
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V A + W +GV ++ R A++
Sbjct: 351 GLGWITV--PANAVVAGWAPKGVSVLTRKAMI 380
>gi|300361205|ref|ZP_07057382.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri JV-V03]
gi|300353824|gb|EFJ69695.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri JV-V03]
Length = 369
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 136/453 (30%), Positives = 206/453 (45%), Gaps = 92/453 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++QD +PK GY P+ L K S +NE
Sbjct: 7 CIGCGSILQDQDPKKSGYL--PTSALKKALTSD------------------------DNE 40
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V C RC LRHY ++ V N DF L S S +++V+ V
Sbjct: 41 ----------VYCQRCFRLRHYNEIMPVEENN--DDF------LALLNSISQKKALVVNV 82
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF S + + + GN +LV K+DL P + ++ +
Sbjct: 83 VDLFDFSNSLISSIKRFIG---------------GN--EYILVGNKVDLFPKNSKESKIK 125
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLA--GKRGNVWAIGAQNAGKST 321
W+RQ A +G+ K K+ VSA K K+L D + LA G++ +++ +G N GKST
Sbjct: 126 DWMRQEANRNGL-KPEKIFLVSAAKK---KNLADLMAFLAKKGEKKDIYFVGTTNVGKST 181
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + K+++ T + PGTTL +++ L L DTPG+L+
Sbjct: 182 LINAIINM-------NSDLKDVI---TTSKFPGTTLDEIKIP--LSNGHYLIDTPGILNA 229
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
NQ+ + L+ +E ++V K LKP TY++ G +I +AGL R D + S T++ +
Sbjct: 230 NQLASHLSGKELEVVEPKKPLKPATYQLLPGQTIFLAGLGRFDYVDGP--SAGFTIYVAR 287
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L +H KTENA T EKH L PP E + LG + F S DI
Sbjct: 288 DLYVHRTKTENADTFYEKHKDDLLLPPSKE---DNLGPLKGQTFSPKEKS------DILF 338
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
G+G+ + + +T EG+ + +R AL+
Sbjct: 339 GGVGFITT--PANVVVKAYTPEGIGLGIRRALI 369
>gi|429205409|ref|ZP_19196686.1| GTPase YqeH [Lactobacillus saerimneri 30a]
gi|428146481|gb|EKW98720.1| GTPase YqeH [Lactobacillus saerimneri 30a]
Length = 369
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 191/451 (42%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q + PGY ++ L+ G L
Sbjct: 8 CIGCGAAIQSEDQAQPGY-------------------TPQAAIKKGLESGQLY------- 41
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
C RC LRHY +V DV + D DF R L + S+++ V
Sbjct: 42 ------------CQRCFRLRHYNEVTDVNIT----DKDFL----RLLDNIGNTDSLIVNV 81
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS + + V D ++LV K DLLP SL ++ +
Sbjct: 82 VDIFDFNGSLIPGLQRFVGDNP-----------------IILVGNKEDLLPKSLKRSKLQ 124
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ A + G+ + SA K + ++ L+ ++D + +V +G N GKSTL+
Sbjct: 125 DWMRQEANKQGLYP-EAVILTSAKKGFAIERLLR-LIDKYRQGRDVQVVGVTNVGKSTLI 182
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K + I + +T + PGTTL R+E + DTPG++H Q
Sbjct: 183 NRIIK----------QRIGIQNLITTSRFPGTTLD--RIEIPFGDGKNMIDTPGIIHKGQ 230
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ LT + KL KE+KP+ Y++ ++ + L R D VTV+ L
Sbjct: 231 MAHYLTGKALKLATPQKEIKPKVYQLNGEQTLFLGALARFDFISGPKG---VTVYVDNNL 287
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K NA KH G LQPP ++ + R EF V S DI AG
Sbjct: 288 MIHRTKMANADNFYTKHAGELLQPP-NQEDMAAFPPLKRFEFTV------SEKTDIVFAG 340
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V K A + W E VD+V+R A++
Sbjct: 341 LGWITV--KPGAKVAAWAPENVDVVVRRAMI 369
>gi|381210423|ref|ZP_09917494.1| GTPase YqeH [Lentibacillus sp. Grbi]
Length = 366
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 198/451 (43%), Gaps = 90/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q +NP GY P L++
Sbjct: 6 CQGCGAYIQTSNPDEAGY--TPESTLDR-------------------------------- 31
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
++C RC L+HY ++DV+ + D DF VG+ +V+ +
Sbjct: 32 --------DIILCKRCFRLKHYNDIQDVS----MTDDDFLEMVGQ----IKDKEGLVVHL 75
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD + DG+ + ++ +V D V+L K+DLLP S + +
Sbjct: 76 VDIFNVDGTMIKGLSSIVGDKP-----------------VILAANKMDLLPKSTNRNKLI 118
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R A+E GIS + ++ +S+VK GL L + ++ ++ +V+ +G N GKST +
Sbjct: 119 KWLRTMAKEAGIS-VKAVYLISSVKGHGLSDL-SEAIEAKRQKQSVYIVGTANVGKSTFI 176
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + + E +T + PGTTLG + + L L DTPG+++ NQ
Sbjct: 177 NKLIQ----------ETTGTTDVITTSYFPGTTLGFIEIP--LDDNTSLIDTPGIVNRNQ 224
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
I ++ + K++ KE+KPR Y++ +++ GL R+D + +S + S L
Sbjct: 225 IAHYISDNDLKIITPKKEVKPRVYQLNNQQTLYFGGLARLDFIKGERQSF--VCYFSNQL 282
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K +NA ++ +H G L PP E +E + + + + DI G
Sbjct: 283 SIHRTKLKNADHLLSEHMGGLLSPPDNET-IEMMPDLTAHSYQI-----EQEKTDIVFPG 336
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW ++ KG+ + V + E V I LR + +
Sbjct: 337 LGWVTIP-KGDITVAVHSPENVRISLRRSFM 366
>gi|375363100|ref|YP_005131139.1| GTP-binding protein YqeH [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|451346227|ref|YP_007444858.1| GTPase YqeH [Bacillus amyloliquefaciens IT-45]
gi|452856330|ref|YP_007498013.1| GTPase involved in ribosome 30S assembly [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|371569094|emb|CCF05944.1| GTP-binding protein YqeH [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|449849985|gb|AGF26977.1| GTPase YqeH [Bacillus amyloliquefaciens IT-45]
gi|452080590|emb|CCP22353.1| GTPase involved in ribosome 30S assembly [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 366
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 209/455 (45%), Gaps = 96/455 (21%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
VC GCGV +Q + + GY P +L K EN
Sbjct: 5 VCIGCGVTIQTEDKQGLGY--APKASLTK-----------------------------EN 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFD---HTVGRKLMSASGARSV 199
V+C RC L++Y +++DV+ L D DF HT+G S+
Sbjct: 34 -----------VICQRCFRLKNYNEIQDVS----LTDDDFLNILHTIG-------DTDSL 71
Query: 200 VLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSP 259
++ VVD DF+GS+ + + V G P ++LV K D+LP S+
Sbjct: 72 IVKVVDIFDFNGSWINGLNRFV----------------GGNP-IILVGNKADILPKSVKR 114
Query: 260 TRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGK 319
R W+++ A+E G+ + + +SA + G+K +ID + R +V+ +G N GK
Sbjct: 115 ERLVQWMKREAKEYGLKPL-DVFLISASRGQGMKEVIDAIEHYREGR-DVYVVGCTNVGK 172
Query: 320 STLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLL 379
ST +N I K V E+NI+ T + PGTTL + + L + L+DTPG++
Sbjct: 173 STFINRIIKEVSG-------EENII---TTSQFPGTTLDAIEIP--LDDGSALYDTPGII 220
Query: 380 HPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWA 439
+ +Q+ + + + K++ KELKPRT+++ +++ GL R D S + +
Sbjct: 221 NHHQMAHYVDKRDLKVLTPKKELKPRTFQLNEKQTLYFGGLARFDY--VSGDKTAFVCYM 278
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
L +H K ENA + EKH G L PP G+ ++E + F + DI
Sbjct: 279 PNELMIHRTKLENADALYEKHAGELLTPP-GKDHLDEFPELTAHTFTIK-----EGKTDI 332
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +V+ + + + + +GV + +R +L+
Sbjct: 333 VFSGLGWVTVQ-QADKKITAYAPKGVHVFVRRSLI 366
>gi|384160215|ref|YP_005542288.1| GTPase YqeH [Bacillus amyloliquefaciens TA208]
gi|384165144|ref|YP_005546523.1| ribosome 30S assembly GTPase [Bacillus amyloliquefaciens LL3]
gi|384169285|ref|YP_005550663.1| GTP-binding protein [Bacillus amyloliquefaciens XH7]
gi|328554303|gb|AEB24795.1| GTPase YqeH [Bacillus amyloliquefaciens TA208]
gi|328912699|gb|AEB64295.1| GTPase involved in ribosome 30S assembly [Bacillus
amyloliquefaciens LL3]
gi|341828564|gb|AEK89815.1| GTP-binding protein [Bacillus amyloliquefaciens XH7]
Length = 366
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 211/455 (46%), Gaps = 96/455 (21%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
VC GCGV +Q + + GY P +L K EN
Sbjct: 5 VCIGCGVTIQTEDKQGLGY--APKASLTK-----------------------------EN 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFD---HTVGRKLMSASGARSV 199
V+C RC L++Y +++DV+ L D DF HT+G S+
Sbjct: 34 -----------VICQRCFRLKNYNEIQDVS----LTDDDFLNILHTIG-------DTDSL 71
Query: 200 VLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSP 259
++ VVD DF+GS+ + + V G P ++LV K D+LP S+
Sbjct: 72 IVKVVDIFDFNGSWINGLNRFV----------------GGNP-IILVGNKADILPKSVKR 114
Query: 260 TRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGK 319
R W+++ A+E G+ K + +SA + G+K +ID + R +V+ +G N GK
Sbjct: 115 ERLVQWMKREAKEYGL-KPLDVFLISASRGQGMKEVIDAIEHYREGR-DVYVVGCTNVGK 172
Query: 320 STLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLL 379
ST +N I K V E+NI+ T + PGTTL + + L + L+DTPG++
Sbjct: 173 STFINRIIKEVSG-------EENII---TTSQFPGTTLDAIEIP--LDDGSALYDTPGII 220
Query: 380 HPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWA 439
+ +Q+ + + + K++ KELKPRT+++ +++ GL R D S +S +V +
Sbjct: 221 NHHQMAHYVDKRDLKVLTPKKELKPRTFQLNEKQTLYFGGLARFDY-VSGDKSAFVC-YM 278
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
L +H K ENA + EKH G L PP G+ ++E + F + DI
Sbjct: 279 PNELMIHRTKLENADALYEKHAGELLTPP-GKDHLDEFPELTAHTFTIK-----EGKTDI 332
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +V+ + + + +GV + +R +L+
Sbjct: 333 VFSGLGWVTVQ-NADKKITAYAPKGVHVFVRRSLI 366
>gi|374672293|dbj|BAL50184.1| GTP-binding protein [Lactococcus lactis subsp. lactis IO-1]
Length = 401
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 141/466 (30%), Positives = 210/466 (45%), Gaps = 85/466 (18%)
Query: 75 DEATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGG 134
+E T + C GCG +Q + G+ P+ L K +A +
Sbjct: 14 NENTMEDLYCIGCGAKIQTEDKNALGFL--PAGALKK-------KIAERDQME------- 57
Query: 135 LVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSAS 194
+A +E SE + + C RC LRHY ++ + L D DF R L
Sbjct: 58 --AVQAGDEGSEASIKTEDLYCQRCFRLRHYNEIAPTS----LTDADF----LRLLKEIG 107
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
++++ VVD DF+GS + K+ GN +++V K D+LP
Sbjct: 108 QHDALIVNVVDIFDFNGSLIPNLHKLTG---------------GN--DLLMVANKRDVLP 150
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAG-----KRG-N 308
SL + W+R++A + K V++ +N DDV +L +RG +
Sbjct: 151 KSLKVGKLTAWLREQAASRSLK--PKDILVTSAQNK------DDVAELMEAIEYYRRGRD 202
Query: 309 VWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPA 368
V+ +G N GKSTL+NAI KS G E I T + PGTTL ++E L
Sbjct: 203 VYVVGVTNVGKSTLINAIIKS------ASGSEDVI----TTSRFPGTTLD--KIEIPLDE 250
Query: 369 QAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEES 428
+ L DTPG++H Q+ L E+ K V+ KE+KP+TY++ ++ GL R D
Sbjct: 251 DSALIDTPGIIHRGQMAHYLEPEDLKYVSPRKEIKPKTYQLNPEQTLFFGGLARFDF--I 308
Query: 429 SVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVS 488
S E +T + + +H K E A EKH G L P + K VR+EF ++
Sbjct: 309 SGERQGMTAYFDNEINVHRTKLEGATEFYEKHKGELLAPALVG------AKLVRREFKIT 362
Query: 489 GSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
S DI +GLGW VR+ +A + W EGVDIV+R AL+
Sbjct: 363 DKS------DIVFSGLGW--VRVPQKAVVAAWVPEGVDIVVRKALI 400
>gi|349611531|ref|ZP_08890766.1| ribosome biogenesis GTPase YqeH [Lactobacillus sp. 7_1_47FAA]
gi|348608624|gb|EGY58604.1| ribosome biogenesis GTPase YqeH [Lactobacillus sp. 7_1_47FAA]
Length = 370
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 203/451 (45%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++QD + K GY P NK+
Sbjct: 8 CIGCGSILQDKDSKLSGYM--PHSAFNKM------------------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+++ + V C RC LRHY ++ V N DF R L S +++++ V
Sbjct: 35 ---IQEPDTSVYCQRCFRLRHYNEITPVNENN--DDF------LRLLNSLGNKKALIVNV 83
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+ S + + + D NE VLV K+DL P + ++ +
Sbjct: 84 VDLFDFNNSLIASLDRFIGD----NE-------------FVLVGNKVDLFPKNSKESKIK 126
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ A +G+ K+ +SA+K + LI+ + GK +++ +G N GKSTL+
Sbjct: 127 DWMRQEANRNGLFP-KKIFLLSAIKKRNIDELIN-YLATKGKNEDIYFVGTTNVGKSTLI 184
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI ++ E KN++ T + PGTTL +++ L L DTPG+L Q
Sbjct: 185 NAIIET-------RSEYKNLI---TTSKFPGTTLDSIKIP--LNEGHYLVDTPGILSKKQ 232
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ +RLT + +LV K+LKP TY++ G +I +AGL R+D + T++ + L
Sbjct: 233 MASRLTGSDLELVAPKKQLKPATYQLLPGQTIFLAGLGRIDFIKGPASGF--TIYVARDL 290
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH KT NA KH L PP ++LG + + S S DI G
Sbjct: 291 YLHRTKTINADEFYLKHKSDLLNPPCDS---DDLGALKGQLYSTSEKS------DILFGG 341
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+G+ +V + +T EG+ + +R AL+
Sbjct: 342 VGFITV--PSGVVIKAYTPEGIGLGIRRALI 370
>gi|423071276|ref|ZP_17060051.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius F0413]
gi|355364638|gb|EHG12370.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius F0413]
Length = 368
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 185/381 (48%), Gaps = 50/381 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEITDVQ----LTDDDF----LRLLHEVGDSNALVVNVVDIFDFNGSV 89
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V+ GN V+LV K D+LP S+ ++ W+ +RA E+
Sbjct: 90 IPGLPRFVT---------------GN--DVLLVGNKKDILPKSVKTSKVTQWLTERAHEE 132
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ I + SA +K L++ + R +V+ +G N GKSTL+NAI + +
Sbjct: 133 GLRPIDVV-LTSAQNKQAIKELMEKIEQYRKGR-DVYVVGVTNVGKSTLINAIIQEITG- 189
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
+K+I+ T + PGTTL ++E L + ++DTPG++H Q+ L+ +
Sbjct: 190 ------DKDII---TTSRFPGTTLD--KIEIPLDDGSHIYDTPGIIHRYQMAHYLSAKHL 238
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
K V+ KE+KP+TY++ ++ + GL R D + T + L LH K A
Sbjct: 239 KYVSPKKEIKPKTYQLNPKQTLFLGGLGRFDFVSGDKQGF--TAYFDNELKLHRTKLAGA 296
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
KH G L PP ++ + K V+ E + + +D+ +GLGW +R+ G
Sbjct: 297 GEFYNKHVGSLLTPP-SKQELPTFPKLVKHELKI------ETKIDVVFSGLGW--IRVVG 347
Query: 514 EAALGVWTYEGVDIVLRNALL 534
A + W EGV +V R A++
Sbjct: 348 PAQVAAWVPEGVAVVTRKAII 368
>gi|419859605|ref|ZP_14382259.1| GTP-binding protein YqeH [Oenococcus oeni DSM 20252 = AWRIB129]
gi|410496622|gb|EKP88105.1| GTP-binding protein YqeH [Oenococcus oeni DSM 20252 = AWRIB129]
Length = 385
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 130/439 (29%), Positives = 206/439 (46%), Gaps = 88/439 (20%)
Query: 75 DEATPKLT---VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLK 131
D+ T L VC GCG Q T PGY N +K+R S+L
Sbjct: 6 DQVTQLLNDGIVCIGCGARFQSTKRGVPGYL-----NEHKLR-SYL-------------- 45
Query: 132 KGGLVVFEAENETSEVKKHEKPV--VCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRK 189
S + + P+ +C RC L++Y +++ V FD DH +
Sbjct: 46 -------------SSLNSVDDPINLLCERCFKLKNYNQIEPVA-------FDSDH-FQKI 84
Query: 190 LMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTK 249
L S S +++VL +VD D GS + + + GN P VVLV K
Sbjct: 85 LTSISDKKALVLYLVDLFDVGGSMINGLTRFI----------------GNNP-VVLVGNK 127
Query: 250 IDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNV 309
D+LP S+ + +W+ + A+ +GI K+ K +SA K + L++++ D + +
Sbjct: 128 FDILPKSVKKNKIANWLTKEAKNEGI-KVLKTVVLSADKGDSGQYLLEEISDYIDEYEEI 186
Query: 310 WAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQ 369
+ +G N GKSTL+N I K + +GRG S +T + PGTTL ++E L +
Sbjct: 187 FVVGVTNVGKSTLINQIIKQI-SGRG---------SVITTSRFPGTTLD--KIEIPLTEK 234
Query: 370 AKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESS 429
++ DTPG++H +Q+ + ++ K + NKE+K T ++ G +I +AGL +D S
Sbjct: 235 TRVIDTPGIIHDSQMAHFIDSKDFKYLLPNKEVKAGTLQLSKGQAIFLAGLGWIDFLNKS 294
Query: 430 VESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSG 489
I VT + + LH GK ENA + GR L+P + ++E + +KE +
Sbjct: 295 --KISVTAYFENNIELHRGKIENAEKLFSSQAGRLLKPTV----LKEYRELEKKEIKL-- 346
Query: 490 SSWDSSSVDIAAAGLGWFS 508
S+ D A AGLGWF+
Sbjct: 347 ----KSNQDFAIAGLGWFT 361
>gi|385829792|ref|YP_005867605.1| GTP-binding protein [Lactococcus lactis subsp. lactis CV56]
gi|418037128|ref|ZP_12675517.1| hypothetical protein LLCRE1631_00324 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|326405800|gb|ADZ62871.1| GTP-binding protein [Lactococcus lactis subsp. lactis CV56]
gi|354695007|gb|EHE94635.1| hypothetical protein LLCRE1631_00324 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
Length = 401
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 140/466 (30%), Positives = 210/466 (45%), Gaps = 85/466 (18%)
Query: 75 DEATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGG 134
+E T + C GCG +Q + G+ P+ L K +A +
Sbjct: 14 NENTMEDLYCIGCGAKIQTEDKNALGFL--PAGALKK-------KIAERDQME------- 57
Query: 135 LVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSAS 194
+A +E SE + + C RC LRHY ++ + L D DF R L
Sbjct: 58 --AVQAGDEGSEASIKTEDLYCQRCFRLRHYNEIAPTS----LTDADF----LRLLKEIG 107
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
++++ VVD DF+GS + K+ GN +++V K D+LP
Sbjct: 108 QHDALIVNVVDIFDFNGSLIPNLHKLTG---------------GN--DLLMVANKRDVLP 150
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAG-----KRG-N 308
SL + W+R++A + K V++ +N DDV +L +RG +
Sbjct: 151 KSLKVGKLTAWLREQAASRSLK--PKDILVTSAQNK------DDVAELMETIEYYRRGRD 202
Query: 309 VWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPA 368
V+ +G N GKSTL+NAI KS G E I T + PGTTL ++E L
Sbjct: 203 VYVVGVTNVGKSTLINAIIKS------ASGSEDVI----TTSRFPGTTLN--KIEIPLDE 250
Query: 369 QAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEES 428
+ L DTPG++H Q+ L E+ K V+ KE+KP+TY++ ++ GL R D
Sbjct: 251 DSALIDTPGIIHRGQMAHYLEPEDLKYVSPRKEIKPKTYQLNPEQTLFFGGLARFDF--I 308
Query: 429 SVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVS 488
S E +T + + +H K E A EKH G L P + K VR+EF ++
Sbjct: 309 SGERQGMTAYFDNEINVHRTKLEGATEFYEKHKGELLAPALVG------AKLVRREFKIT 362
Query: 489 GSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
S DI +GLGW VR+ +A + W EGVD+V+R AL+
Sbjct: 363 DKS------DIVFSGLGW--VRVPQKAVVAAWVPEGVDVVVRKALI 400
>gi|340354705|ref|ZP_08677406.1| GTP-binding protein [Sporosarcina newyorkensis 2681]
gi|339623104|gb|EGQ27610.1| GTP-binding protein [Sporosarcina newyorkensis 2681]
Length = 371
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 189/382 (49%), Gaps = 50/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARS-VVLMVVDAADFDGS 212
V+C RC LR+Y +++ V++ DF +++ G + +++ VVD DF+GS
Sbjct: 39 VICQRCFKLRNYNELQPVSLSG--DDF-------LAILNGIGEKDGLIVKVVDIFDFNGS 89
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + + V GK ++L+ K D+LP S++P R +W++ A +
Sbjct: 90 WINGLHRFV-------------GKK----DILLIGNKSDILPKSINPKRVTNWMKAEAAK 132
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ I L VSAVK G+ +D ++ K +V+ +G N GKST +N I K
Sbjct: 133 LGLKPIDVL-LVSAVKGTGMSEALD-AIETYRKGKDVYVVGCTNVGKSTFINRIIK---- 186
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
+ + +T + PGTTL +V + L L DTPG+++ +QI L ++
Sbjct: 187 ------DATGVQDVITTSYFPGTTLDVVEIP--LDDGKSLMDTPGIINDHQIAHDLDAKD 238
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
KL+ KELKP+ Y++ A ++ I GL R D S ++ + LPLH K EN
Sbjct: 239 LKLITPKKELKPKVYQLNAEQTLFIGGLARFDFIAGDRSSF--NIYVANGLPLHRTKLEN 296
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A + H G L PP +E+L VR EF + + D+ +GLGW +++
Sbjct: 297 ADELYLNHLGDMLSPP-SAASLEKLPPLVRHEFSIK-----EAKTDVVISGLGWITIQ-H 349
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
+ + V +GV++++R +L+
Sbjct: 350 ADVQVAVHAPKGVNVIIRPSLI 371
>gi|414160964|ref|ZP_11417227.1| ribosome biogenesis GTPase YqeH [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410876643|gb|EKS24541.1| ribosome biogenesis GTPase YqeH [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 365
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 218/456 (47%), Gaps = 97/456 (21%)
Query: 82 TVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAE 141
T C GCG +Q +PK PGY P+ NL
Sbjct: 4 TKCIGCGATLQADDPKKPGYV--PAHNL-------------------------------- 29
Query: 142 NETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDF-DFDHTVGRKLMSASGARSVV 200
H++ V+C RC L++Y +++DV +++ DF D L + + +V
Sbjct: 30 --------HKEDVICQRCFRLKNYNEIQDVGMDS--QDFLDL-------LNHLADKKGLV 72
Query: 201 LMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPT 260
+ VVD DF+GSF + ++V GN +V+L KIDLLP ++
Sbjct: 73 VNVVDIFDFEGSFINALKRIV----------------GN-KKVILAANKIDLLPKQINKR 115
Query: 261 RFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKS 320
R + W+++ AR+ G+ + +SA K +G++ L++ + K+ +V+ +G N GKS
Sbjct: 116 RVKDWLKKSARKYGLEA-EDVVLISAEKGYGIQDLLE-AIQQHRKQEDVYIVGTTNVGKS 173
Query: 321 TLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLH 380
TL+N K ++ G EKN+V T + PGTTL ++ + L + ++DTPG++
Sbjct: 174 TLIN---KLIEQSVG----EKNVV---TTSRFPGTTLDLIDIP--LDDHSFMYDTPGVIQ 221
Query: 381 PNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWAS 440
+Q+T ++ +E K + NKE+K R Y++ ++ GL R+D + + S
Sbjct: 222 DHQMTHYVSEKELKQIMPNKEVKQRVYQLNEEQTLFFGGLARIDYVSGGKRPL--VCYFS 279
Query: 441 PYLPLHMGKTENACTMVEKHFGRQLQPPIGEK--RVEELGKWVRKEFHVSGSSWDSSSVD 498
LP+H KTE A + G+ L PP + ++E+ K VR E +G D
Sbjct: 280 NNLPIHRTKTEKANELWRTQLGKLLAPPSNKDDFNLDEM-KAVRLE---TG----KEKRD 331
Query: 499 IAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+ AGLG+ ++ A + V + VD+VLRN+++
Sbjct: 332 VMIAGLGFITI--GPGAKVIVRVPKSVDVVLRNSIM 365
>gi|425737432|ref|ZP_18855705.1| GTPase YqeH [Staphylococcus massiliensis S46]
gi|425482780|gb|EKU49936.1| GTPase YqeH [Staphylococcus massiliensis S46]
Length = 366
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 210/451 (46%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q +PK GY P+ N+ K
Sbjct: 7 CIGCGATLQSEDPKKSGYV--PAHNIGK-------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L+HY +V+DV +++ DF D G S + +V+ V
Sbjct: 33 --------EDVICKRCFRLKHYNEVQDVGMDS--EDF-LDLLTG-----LSDKKGIVVNV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+GSF + ++V GN P ++L KIDLLP ++ R
Sbjct: 77 IDIFDFEGSFIHAIKRIV----------------GNKP-IILAANKIDLLPKQINKRRVT 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+++ AR G+ + + +SA KN GL++L++ + G + +V+ +G N GKSTL+
Sbjct: 120 EWIKRTARSYGL-ETEVVVLLSAEKNIGLETLLETIEKYRG-QDDVYIVGTTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N K ++ G EK++V T + PGTTL ++ + L + +FDTPG++ +Q
Sbjct: 178 N---KLIETSVG----EKDVV---TTSRFPGTTLDMIDIP--LNDDSFMFDTPGIIQEHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+T ++ +E K++ KE+K R +++ G +++ GL R+D E + + S L
Sbjct: 226 MTHLVSDKELKIIMPKKEIKQRVFQLNEGQTLYFGGLARIDYHEGGKRPL--VCYFSNEL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTENA + E G L+PP ++ ++ + D+ +G
Sbjct: 284 HIHRTKTENADRLWETKLGDVLEPP------KDPSQFNLDQIKTVKLETGKHKKDVMISG 337
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LG+ ++ + A V VD+ LR +++
Sbjct: 338 LGFITI--ESGAKFVVKVPRNVDVTLRPSIM 366
>gi|394992033|ref|ZP_10384826.1| GTPase YqeH [Bacillus sp. 916]
gi|393807049|gb|EJD68375.1| GTPase YqeH [Bacillus sp. 916]
Length = 366
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 209/455 (45%), Gaps = 96/455 (21%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
VC GCGV +Q + + GY P +L K EN
Sbjct: 5 VCIGCGVTIQTEDKQGLGY--APKASLTK-----------------------------EN 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFD---HTVGRKLMSASGARSV 199
V+C RC L++Y +++DV+ L D DF HT+G S+
Sbjct: 34 -----------VICQRCFRLKNYNEIQDVS----LTDDDFLNILHTIG-------DTDSL 71
Query: 200 VLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSP 259
++ VVD DF+GS+ + + V G P ++LV K D+LP S+
Sbjct: 72 IVKVVDIFDFNGSWINGLNRFV----------------GGNP-IILVGNKADILPKSVKR 114
Query: 260 TRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGK 319
R W+++ A+E G+ + + +SA + G+K +ID + R +V+ +G N GK
Sbjct: 115 ERLVQWMKREAKEYGLKPL-DVFLISASRGQGMKEVIDAIEHYREGR-DVYVVGCTNVGK 172
Query: 320 STLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLL 379
ST +N I K V E+NI+ T + PGTTL + + L + L+DTPG++
Sbjct: 173 STFINRIIKEVSG-------EENII---TTSQFPGTTLDAIEIP--LDDGSALYDTPGII 220
Query: 380 HPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWA 439
+ +Q+ + + + K++ KELKPRT+++ +++ GL R D S + +
Sbjct: 221 NHHQMAHYVDKRDLKVLTPKKELKPRTFQLNEKQTLYFGGLARFDY--VSGDKTAFVCYM 278
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
L +H K ENA + EKH G L PP G+ ++E + F + DI
Sbjct: 279 PNELMIHRTKLENADALYEKHAGELLTPP-GKDHLDEFPELTPHTFTIK-----EGKTDI 332
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +V+ + + + + +GV + +R +L+
Sbjct: 333 VFSGLGWVTVQ-QADKKITAYAPKGVHVFVRRSLI 366
>gi|385837239|ref|YP_005874869.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris A76]
gi|414073525|ref|YP_006998742.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris
UC509.9]
gi|358748467|gb|AEU39446.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris A76]
gi|413973445|gb|AFW90909.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris
UC509.9]
Length = 391
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 140/466 (30%), Positives = 210/466 (45%), Gaps = 85/466 (18%)
Query: 75 DEATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGG 134
+E T + C GCG +Q + G+ P+ L K +A +
Sbjct: 4 NENTMEDLYCIGCGAKIQTEDKNALGFL--PAGALKK-------KIAERDQME------- 47
Query: 135 LVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSAS 194
+A +E SE + + C RC LRHY ++ + L D DF R L
Sbjct: 48 --AVQAGDEGSEASIKTEDLYCQRCFRLRHYNEIAPTS----LTDADF----LRLLKEIG 97
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
++++ VVD DF+GS + K+ GN +++V K D+LP
Sbjct: 98 QHDALIVNVVDIFDFNGSLIPNLHKLTG---------------GN--DLLMVANKRDVLP 140
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAG-----KRG-N 308
SL + W+R++A + K V++ +N DDV +L +RG +
Sbjct: 141 KSLKVGKLTAWLREQAASRSLK--PKDILVTSAQNK------DDVAELMEAIEYYRRGRD 192
Query: 309 VWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPA 368
V+ +G N GKSTL+NAI KS G E I T + PGTTL ++E L
Sbjct: 193 VYVVGVTNVGKSTLINAIIKS------ASGSEDVI----TTSRFPGTTLD--KIEIPLDE 240
Query: 369 QAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEES 428
+ L DTPG++H Q+ L E+ K V+ KE+KP+TY++ ++ GL R D
Sbjct: 241 DSALIDTPGIIHRGQMAHYLEPEDLKYVSPRKEIKPKTYQLNPEQTLFFGGLARFDF--I 298
Query: 429 SVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVS 488
S E +T + + +H K E A EKH G L P + K VR+EF ++
Sbjct: 299 SGERQGMTAYFDNEINVHRTKLEGATEFYEKHKGELLAPALVG------AKLVRREFKIT 352
Query: 489 GSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
S DI +GLGW VR+ +A + W EGVD+V+R AL+
Sbjct: 353 DKS------DIVFSGLGW--VRVPQKAVVAAWVPEGVDVVVRKALI 390
>gi|387899200|ref|YP_006329496.1| GTP-binding protein [Bacillus amyloliquefaciens Y2]
gi|387173310|gb|AFJ62771.1| GTP-binding protein [Bacillus amyloliquefaciens Y2]
Length = 371
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 209/455 (45%), Gaps = 96/455 (21%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
VC GCGV +Q + + GY P +L K EN
Sbjct: 10 VCIGCGVAIQTEDKQGLGY--APKASLTK-----------------------------EN 38
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFD---HTVGRKLMSASGARSV 199
V+C RC L++Y +++DV+ L D DF HT+G S+
Sbjct: 39 -----------VICQRCFRLKNYNEIQDVS----LTDDDFLNILHTIGD-------TDSL 76
Query: 200 VLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSP 259
++ VVD DF+GS+ + + V G P ++LV K D+LP S+
Sbjct: 77 IVKVVDIFDFNGSWINGLNRFV----------------GGNP-IILVGNKADILPKSVKR 119
Query: 260 TRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGK 319
R W+++ A+E G+ + + +SA + G+K +ID + R +V+ +G N GK
Sbjct: 120 ERLVQWMKREAKEYGLKPL-DVFLISASRGQGMKEVIDAIEHYREGR-DVYVVGCTNVGK 177
Query: 320 STLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLL 379
ST +N I K V E+NI+ T + PGTTL + + L + L+DTPG++
Sbjct: 178 STFINRIIKEVSG-------EENII---TTSQFPGTTLDAIEIP--LDDGSALYDTPGII 225
Query: 380 HPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWA 439
+ +Q+ + + + K++ KELKPRT+++ +++ GL R D S + +
Sbjct: 226 NHHQMAHYVDKRDLKVLTPKKELKPRTFQLNEKQTLYFGGLARFDY--VSGDKTAFVCYM 283
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
L +H K ENA + EKH G L PP G+ ++E + F + DI
Sbjct: 284 PNELMIHRTKLENADALYEKHAGELLTPP-GKDHLDEFPELTPHTFTIK-----EGKTDI 337
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +V+ + + + + +GV + +R +L+
Sbjct: 338 VFSGLGWVTVQ-QADKKITAYAPKGVHVFVRRSLI 371
>gi|424788334|ref|ZP_18215089.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius BA1]
gi|422112837|gb|EKU16599.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius BA1]
Length = 368
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 184/381 (48%), Gaps = 50/381 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEITDVQ----LTDDDF----LRLLHEVGDSNALVVNVVDIFDFNGSI 89
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V+ GN V+LV K D+LP S+ + W+ +RA E+
Sbjct: 90 IPGLPRFVA---------------GN--DVLLVGNKKDILPKSVKSNKVTQWLTERAHEE 132
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ I + SA +K L++ + R +V+ +G N GKSTL+NAI + +
Sbjct: 133 GLRPIDVV-LTSAQNKQAIKELMEKIEQYRKGR-DVYVVGVTNVGKSTLINAIIQEITG- 189
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
+K+I+ T + PGTTL ++E L + ++DTPG++H Q+ L+ +
Sbjct: 190 ------DKDII---TTSRFPGTTLD--KIEIPLADGSHIYDTPGIIHRYQMAHYLSAKHL 238
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
K V+ KE+KP+TY++ ++ + GL R D + T + L LH K A
Sbjct: 239 KYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFVSGDKQGF--TAYFDNELKLHRTKLAGA 296
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
KH G L PP ++ + K V+ E + + +D+ +GLGW +R+ G
Sbjct: 297 GEFYNKHVGSLLTPP-SKQELPTFPKLVKHELKI------ETKIDVVFSGLGW--IRVVG 347
Query: 514 EAALGVWTYEGVDIVLRNALL 534
A + W EGV +V R A++
Sbjct: 348 PAQVAAWVPEGVAVVTRKAII 368
>gi|385265566|ref|ZP_10043653.1| hypothetical protein MY7_2332 [Bacillus sp. 5B6]
gi|385150062|gb|EIF13999.1| hypothetical protein MY7_2332 [Bacillus sp. 5B6]
Length = 366
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 209/455 (45%), Gaps = 96/455 (21%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
VC GCGV +Q + + GY P +L K EN
Sbjct: 5 VCIGCGVTIQTEDKQGLGY--APKASLTK-----------------------------EN 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFD---HTVGRKLMSASGARSV 199
V+C RC L++Y +++DV+ L D DF HT+G S+
Sbjct: 34 -----------VICQRCFRLKNYNEIQDVS----LTDDDFLNILHTIG-------DTDSL 71
Query: 200 VLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSP 259
++ VVD DF+GS+ + + V G P ++LV K D+LP S+
Sbjct: 72 IVKVVDIFDFNGSWINGLNRFV----------------GGNP-IILVGNKADILPKSVKR 114
Query: 260 TRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGK 319
R W+++ A+E G+ + + +SA + G+K +ID + R +V+ +G N GK
Sbjct: 115 ERLVQWMKREAKEYGLKPL-DVFLISASRGQGMKEVIDAIEHYREDR-DVYVVGCTNVGK 172
Query: 320 STLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLL 379
ST +N I K V E+NI+ T + PGTTL + + L + L+DTPG++
Sbjct: 173 STFINRIIKEVSG-------EENII---TTSQFPGTTLDAIEIP--LDDGSALYDTPGII 220
Query: 380 HPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWA 439
+ +Q+ + + + K++ KELKPRT+++ +++ GL R D S + +
Sbjct: 221 NHHQMAHYVDKRDLKVLTPKKELKPRTFQLNEKQTLYFGGLARFDY--VSGDKTAFVCYM 278
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
L +H K ENA + EKH G L PP G+ ++E + F + DI
Sbjct: 279 PNELMIHRTKLENADALYEKHAGELLTPP-GKDHLDEFPELQPHTFSIK-----EGKTDI 332
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +V+ + + + + +GV + +R +L+
Sbjct: 333 VFSGLGWVTVQ-QADKKITAYAPKGVHVFVRRSLI 366
>gi|384176191|ref|YP_005557576.1| YqeH [Bacillus subtilis subsp. subtilis str. RO-NN-1]
gi|349595415|gb|AEP91602.1| YqeH [Bacillus subtilis subsp. subtilis str. RO-NN-1]
Length = 366
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 195/388 (50%), Gaps = 62/388 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L++Y +++DV+ L D DF + L S+V+ +VD DF+GS+
Sbjct: 34 VICQRCFRLKNYNEIQDVS----LTDDDFLNI----LHGIGETDSLVVKIVDIFDFNGSW 85
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ ++V G P ++LV K D+LP SL R W+++ A+E
Sbjct: 86 INGLQRLV----------------GGNP-ILLVGNKADILPKSLKRERLIQWMKREAKEL 128
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ K + VSA + G++ +ID + + +V+ +G N GKST +N I K V
Sbjct: 129 GL-KPVDVFLVSAGRGQGIREVIDAIEHYRNGK-DVYVVGCTNVGKSTFINRIIKEVS-- 184
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
GEE I T + PGTTL + + L + L+DTPG+++ +Q+ + +++
Sbjct: 185 ----GEEDII----TTSQFPGTTLDAIEIP--LDDGSSLYDTPGIINNHQMAHYVNKKDL 234
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP---YLP----LH 446
K+++ KELKPRT+++ +++ GL R D YV+ SP Y+P +H
Sbjct: 235 KILSPKKELKPRTFQLNDQQTLYFGGLARFD---------YVSGERSPFICYMPNELMIH 285
Query: 447 MGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGW 506
K ENA + EKH G L PP G+ ++E + V F + + DI +GLGW
Sbjct: 286 RTKLENADALYEKHAGELLTPP-GKDEMDEFPELVAHTFTIK-----AKKTDIVFSGLGW 339
Query: 507 FSVRLKGEAALGVWTYEGVDIVLRNALL 534
+V + + + +GV + +R +L+
Sbjct: 340 VTVH-DADKKVTAYAPKGVHVFVRRSLI 366
>gi|336053764|ref|YP_004562051.1| GTP-binding protein [Lactobacillus kefiranofaciens ZW3]
gi|333957141|gb|AEG39949.1| GTP-binding protein [Lactobacillus kefiranofaciens ZW3]
Length = 369
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 208/452 (46%), Gaps = 88/452 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG ++Q +PK GY P L+K R N
Sbjct: 6 ICIGCGAVLQSDDPKKAGYL--PKSALDKAR---------------------------TN 36
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
E ++V C RC LRHY ++ V + N DF L S + +++V+
Sbjct: 37 ENTDV-------YCQRCFRLRHYNEIMPVDLNN--DDF------LALLNSLAEKKALVVN 81
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF S + + V + +LV K DL P + ++
Sbjct: 82 VVDLFDFSNSLLSSLKRFVGNN-----------------DFILVGNKFDLFPKNSKQSKI 124
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+RQ A G+ K+ VSA K L +LI+ ++ + +V+ +G N GKSTL
Sbjct: 125 KDWIRQEANRMGLYP-KKIFLVSARKKLNLDTLIE-YINQQSQDKDVYFVGTTNVGKSTL 182
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + GD I +T + PGTTL R+E L L DTPG++ +
Sbjct: 183 INAIVDMM-----GD-----IQDLITTSRFPGTTLD--RIEIPLENGHFLIDTPGIMTES 230
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+TT L ++ +L++ K LKP TY++ G+++ +AGL R+D + ES TV+ +
Sbjct: 231 QLTTHLNAKDLELISPKKPLKPATYQLLPGNTLFLAGLGRIDYLKG--ESTSFTVYVARG 288
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+ +H KT NA EKH G L PP + ++ L +EF+ + S D+
Sbjct: 289 MYVHRTKTINADAFYEKHRGELLAPPASDDQLPALKG---QEFNTNYKS------DLLFG 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
G+G+ +V KG + +T G+ + +R AL+
Sbjct: 340 GIGFVTVP-KG-CVVKTYTPAGIGLGIRRALI 369
>gi|384266179|ref|YP_005421886.1| GTP-binding protein YqeH [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|380499532|emb|CCG50570.1| GTP-binding protein YqeH [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
Length = 366
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 209/455 (45%), Gaps = 96/455 (21%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
VC GCGV +Q + + GY P +L K EN
Sbjct: 5 VCIGCGVAIQTEDKQGLGY--APKASLTK-----------------------------EN 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFD---HTVGRKLMSASGARSV 199
V+C RC L++Y +++DV+ L D DF HT+G S+
Sbjct: 34 -----------VICQRCFRLKNYNEIQDVS----LTDDDFLNILHTIG-------DTDSL 71
Query: 200 VLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSP 259
++ VVD DF+GS+ + + V G P ++LV K D+LP S+
Sbjct: 72 IVKVVDIFDFNGSWINGLNRFV----------------GGNP-IILVGNKADILPKSVKR 114
Query: 260 TRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGK 319
R W+++ A+E G+ + + +SA + G+K +ID + R +V+ +G N GK
Sbjct: 115 ERLVQWMKREAKEYGLKPL-DVFLISASRGQGMKEVIDAIEHYREGR-DVYVVGCTNVGK 172
Query: 320 STLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLL 379
ST +N I K V E+NI+ T + PGTTL + + L + L+DTPG++
Sbjct: 173 STFINRIIKEVSG-------EENII---TTSQFPGTTLDAIEIP--LDDGSALYDTPGII 220
Query: 380 HPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWA 439
+ +Q+ + + + K++ KELKPRT+++ +++ GL R D S + +
Sbjct: 221 NHHQMAHYVDKRDLKVLTPKKELKPRTFQLNEKQTLYFGGLARFDY--VSGDKTAFVCYM 278
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
L +H K ENA + EKH G L PP G+ ++E + F + DI
Sbjct: 279 PNELMIHRTKLENADALYEKHAGELLTPP-GKDHLDEFPELTPHTFTIK-----EGKTDI 332
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +V+ + + + + +GV + +R +L+
Sbjct: 333 VFSGLGWVTVQ-QADKKITAYAPKGVHVFVRRSLI 366
>gi|116490944|ref|YP_810488.1| GTP-binding protein YqeH [Oenococcus oeni PSU-1]
gi|290890418|ref|ZP_06553493.1| hypothetical protein AWRIB429_0883 [Oenococcus oeni AWRIB429]
gi|419758907|ref|ZP_14285219.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB304]
gi|419857813|ref|ZP_14380516.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB202]
gi|421185344|ref|ZP_15642755.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB318]
gi|421188821|ref|ZP_15646153.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB419]
gi|421189610|ref|ZP_15646924.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB422]
gi|421190931|ref|ZP_15648215.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB548]
gi|421195410|ref|ZP_15652618.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB568]
gi|421197523|ref|ZP_15654698.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB576]
gi|116091669|gb|ABJ56823.1| Predicted GTPase [Oenococcus oeni PSU-1]
gi|290479814|gb|EFD88463.1| hypothetical protein AWRIB429_0883 [Oenococcus oeni AWRIB429]
gi|399904362|gb|EJN91818.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB304]
gi|399964154|gb|EJN98808.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB419]
gi|399964525|gb|EJN99166.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB318]
gi|399972700|gb|EJO06899.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB422]
gi|399973627|gb|EJO07792.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB548]
gi|399975132|gb|EJO09200.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB576]
gi|399975835|gb|EJO09870.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB568]
gi|410497284|gb|EKP88759.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB202]
Length = 385
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 205/439 (46%), Gaps = 88/439 (20%)
Query: 75 DEATPKLT---VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLK 131
D+ T L VC GCG Q T PGY N +K+R S+L
Sbjct: 6 DQVTQLLNDGIVCIGCGARFQSTKRGVPGYL-----NEHKLR-SYL-------------- 45
Query: 132 KGGLVVFEAENETSEVKKHEKPV--VCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRK 189
S + + P+ +C RC L++Y +++ V FD DH +
Sbjct: 46 -------------SSLNSVDDPINLLCERCFKLKNYNQIEPVA-------FDSDH-FQKI 84
Query: 190 LMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTK 249
L S S +++VL +VD D GS + + + GN P VVLV K
Sbjct: 85 LTSISDKKALVLYLVDLFDVGGSMINGLTRFI----------------GNNP-VVLVGNK 127
Query: 250 IDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNV 309
D+LP S+ + +W+ + A+ +GI K+ K +SA K + L++++ D + +
Sbjct: 128 FDILPKSVKKNKIANWLTKEAKNEGI-KVLKTVVLSADKGDSGQYLLEEISDYIDEYEEI 186
Query: 310 WAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQ 369
+ +G N GKSTL+N I K + +GRG S +T + PGTTL ++E L +
Sbjct: 187 FVVGVTNVGKSTLINQIIKQI-SGRG---------SVITTSRFPGTTLD--KIEIPLTEK 234
Query: 370 AKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESS 429
++ DTPG++H +Q+ + ++ K + NKE+K T ++ G +I +AGL +D S
Sbjct: 235 TRVIDTPGIIHDSQMAHFIDSKDFKYLLPNKEVKAGTLQLSKGQAIFLAGLGWIDFLNKS 294
Query: 430 VESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSG 489
I VT + + LH GK ENA + GR L+P + ++E + +KE +
Sbjct: 295 --KISVTAYFENNIELHRGKIENAEKLFSSQAGRLLKPTV----LKEYRELEKKEIKLKA 348
Query: 490 SSWDSSSVDIAAAGLGWFS 508
+ D A AGLGWF+
Sbjct: 349 NQ------DFAIAGLGWFT 361
>gi|443631866|ref|ZP_21116046.1| hypothetical protein BSI_11170 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347981|gb|ELS62038.1| hypothetical protein BSI_11170 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 366
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 194/388 (50%), Gaps = 62/388 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L++Y +++DV+ L D DF + L S+V+ +VD DF+GS+
Sbjct: 34 VICQRCFRLKNYNEIQDVS----LTDDDFLNI----LHGIGETDSLVVKIVDIFDFNGSW 85
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ ++V G P ++LV K D+LP SL R W+++ A+E
Sbjct: 86 INGLQRLV----------------GGNP-ILLVGNKADILPKSLKRERLIQWMKREAKEL 128
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ K + VSA + G+K +ID + + +V+ +G N GKST +N I K V
Sbjct: 129 GL-KPVDVFLVSAGRGQGIKEVIDAIEHYRNGK-DVYVVGCTNVGKSTFINRIIKEVS-- 184
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
GEE I T + PGTTL + + L + L+DTPG+++ +Q+ + +++
Sbjct: 185 ----GEEDII----TTSQFPGTTLDAIEIP--LDDGSALYDTPGIINHHQMAHYVNKKDL 234
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP---YLP----LH 446
K+++ KELKPRT+++ +++ GL R D YV+ SP Y+P +H
Sbjct: 235 KILSPKKELKPRTFQLNDQQTLYFGGLARFD---------YVSGERSPFICYMPNELMIH 285
Query: 447 MGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGW 506
K ENA + EKH G L PP G+ ++E + V F + DI +GLGW
Sbjct: 286 RTKLENADALYEKHAGELLTPP-GKDEMDEFPELVAHTFTIK-----DKKTDIVFSGLGW 339
Query: 507 FSVRLKGEAALGVWTYEGVDIVLRNALL 534
+V + + + +GV + +R +L+
Sbjct: 340 VTVH-DADKKVTAYAPKGVHVFVRRSLI 366
>gi|392429164|ref|YP_006470175.1| GTP-binding protein [Streptococcus intermedius JTH08]
gi|419776069|ref|ZP_14301992.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius SK54]
gi|383846277|gb|EID83676.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius SK54]
gi|391758310|dbj|BAM23927.1| GTP-binding protein [Streptococcus intermedius JTH08]
Length = 368
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 184/381 (48%), Gaps = 50/381 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
+ C RC LRHY ++ DV L D DF R L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEITDVQ----LTDDDF----LRLLHEVGDSNALVVNVVDIFDFNGSI 89
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V+ GN V+LV K D+LP S+ + W+ +RA E+
Sbjct: 90 IPGLPRFVA---------------GN--DVLLVGNKKDILPKSVKSNKVTQWLTERAHEE 132
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ I + SA +K L++ + R +V+ +G N GKSTL+NAI + +
Sbjct: 133 GLRPIDVV-LTSAQNKQAIKELMEKIEQYRKGR-DVYVVGVTNVGKSTLINAIIQEITG- 189
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
+K+I+ T + PGTTL ++E L + ++DTPG++H Q+ L+ +
Sbjct: 190 ------DKDII---TTSRFPGTTLD--KIEIPLDDGSHIYDTPGIIHRYQMAHYLSAKHL 238
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
K V+ KE+KP+TY++ ++ + GL R D + T + L LH K A
Sbjct: 239 KYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFVSGDKQGF--TAYFDNELKLHRTKLAGA 296
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
KH G L PP ++ + K V+ E + + +D+ +GLGW +R+ G
Sbjct: 297 GEFYNKHVGSLLTPP-SKQELPTFPKLVKHELKI------ETKIDVVFSGLGW--IRVVG 347
Query: 514 EAALGVWTYEGVDIVLRNALL 534
A + W EGV +V R A++
Sbjct: 348 PAQVAAWVPEGVAVVTRKAII 368
>gi|429505976|ref|YP_007187160.1| GTPase YqeH [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
gi|429487566|gb|AFZ91490.1| GTPase YqeH [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
Length = 366
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 209/455 (45%), Gaps = 96/455 (21%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
VC GCGV +Q + + GY P +L K EN
Sbjct: 5 VCIGCGVTIQTEDKQGLGY--APKASLTK-----------------------------EN 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFD---HTVGRKLMSASGARSV 199
V+C RC L++Y +++DV+ L D DF HT+G S+
Sbjct: 34 -----------VICQRCFRLKNYNEIQDVS----LTDDDFLNILHTIG-------DTDSL 71
Query: 200 VLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSP 259
++ VVD DF+GS+ + + V G P ++LV K D+LP S+
Sbjct: 72 IVKVVDIFDFNGSWINGLNRFV----------------GGNP-IILVGNKADILPKSVKR 114
Query: 260 TRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGK 319
R W+++ A+E G+ + + +SA + G+K +ID + R +V+ +G N GK
Sbjct: 115 ERLVQWMKREAKEYGLKPL-DVFLISASRGQGMKEVIDAIEHYREGR-DVYVVGCTNVGK 172
Query: 320 STLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLL 379
ST +N I K V E+NI+ T + PGTTL + + L + L+DTPG++
Sbjct: 173 STFINRIIKEVSG-------EENII---TTSQFPGTTLDAIEIP--LDDGSALYDTPGII 220
Query: 380 HPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWA 439
+ +Q+ + + + K++ KELKPRT+++ +++ GL R D S + +
Sbjct: 221 NHHQMAHYVDKRDLKVLTPKKELKPRTFQLNEKQTLYFGGLARFDY--VSGDKTAFVCYM 278
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
L +H K ENA + EKH G L PP G+ ++E + F + DI
Sbjct: 279 PNELMIHRTKLENADALYEKHAGELLTPP-GKDHLDEFPELTAHTFTIK-----EGKTDI 332
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +V+ + + + + +GV + +R +L+
Sbjct: 333 VFSGLGWVTVQ-QEDKKITAYAPKGVHVFVRRSLI 366
>gi|268319902|ref|YP_003293558.1| hypothetical protein FI9785_1431 [Lactobacillus johnsonii FI9785]
gi|262398277|emb|CAX67291.1| hypothetical protein predicted by Glimmer/Critica [Lactobacillus
johnsonii FI9785]
Length = 369
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 203/451 (45%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++QD +PK GY PS L K +S +NE
Sbjct: 7 CIGCGSILQDQDPKKSGYL--PSSALKKALESD------------------------DNE 40
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V C RC LRHY ++ V N DF L S S +++V+ V
Sbjct: 41 ----------VYCQRCFRLRHYNEIMPVEENN--DDF------LALLNSISQKKALVVNV 82
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF S + + + GN +LV K+DL P + ++ +
Sbjct: 83 VDLFDFSNSLISSIKRFIG---------------GN--EYILVGNKVDLFPKNSKESKIK 125
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ A +G+ K K+ VSA K L L+ + G++ +++ +G N GKSTL+
Sbjct: 126 DWMRQEANRNGL-KPEKIFLVSAAKKKNLDELMAFLAK-KGEKKDIYFVGTTNVGKSTLI 183
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + + K+++ T + PGTTL +++ L L DTPG+L+ NQ
Sbjct: 184 NAIINM-------NSDLKDVI---TTSKFPGTTLDEIKIP--LSNGNYLIDTPGILNANQ 231
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + L+ +E ++V K LKP TY++ G +I +AGL R D + S T++ + L
Sbjct: 232 LASHLSGKELEVVEPKKPLKPATYQLLPGQTIFLAGLGRFDYVDGP--SAGFTIYVARDL 289
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTENA EKH L PP E + LG + F S DI G
Sbjct: 290 YVHRTKTENADAFYEKHKDDLLLPPSKE---DNLGPLKGQTFSPKEKS------DILFGG 340
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+G+ + + +T EG+ + +R AL+
Sbjct: 341 VGFITT--PANVVVKAYTPEGIGLGIRRALI 369
>gi|321312052|ref|YP_004204339.1| GTPase YqeH [Bacillus subtilis BSn5]
gi|320018326|gb|ADV93312.1| GTPase YqeH [Bacillus subtilis BSn5]
Length = 366
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 194/388 (50%), Gaps = 62/388 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L++Y +++DV+ L D DF + L S+V+ +VD DF+GS+
Sbjct: 34 VICQRCFRLKNYNEIQDVS----LTDDDFLNI----LHGIGETDSLVVKIVDIFDFNGSW 85
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ ++V G P ++LV K D+LP SL R W+++ A+E
Sbjct: 86 INGLQRLV----------------GGNP-ILLVGNKADILPKSLKRERLIQWMKREAKEL 128
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ K + VSA + G++ +ID + + +V+ +G N GKST +N I K V
Sbjct: 129 GL-KPVDVFLVSAGRGQGIREVIDAIEHYRNGK-DVYVVGCTNVGKSTFINRIIKEVS-- 184
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
GEE I T + PGTTL + + L + L+DTPG+++ +Q+ + +++
Sbjct: 185 ----GEEDII----TTSQFPGTTLDAIEIP--LDDGSSLYDTPGIINNHQMAHYVNKKDL 234
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP---YLP----LH 446
K+++ KELKPRT+++ +++ GL R D YV+ SP Y+P +H
Sbjct: 235 KILSPKKELKPRTFQLNDQQTLYFGGLARFD---------YVSGERSPFICYMPNELMIH 285
Query: 447 MGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGW 506
K ENA + EKH G L PP G+ ++E + V F + DI +GLGW
Sbjct: 286 RTKLENADALYEKHAGELLTPP-GKDEMDEFPELVAHTFTIK-----DKKTDIVFSGLGW 339
Query: 507 FSVRLKGEAALGVWTYEGVDIVLRNALL 534
+V + + + +GV + +R +L+
Sbjct: 340 VTVH-DADKKVTAYAPKGVHVFIRRSLI 366
>gi|315038850|ref|YP_004032418.1| GTP-binding protein YqeH [Lactobacillus amylovorus GRL 1112]
gi|325957288|ref|YP_004292700.1| GTPase YqeH [Lactobacillus acidophilus 30SC]
gi|385818080|ref|YP_005854470.1| GTPase YqeH [Lactobacillus amylovorus GRL1118]
gi|312276983|gb|ADQ59623.1| GTP-binding protein YqeH [Lactobacillus amylovorus GRL 1112]
gi|325333853|gb|ADZ07761.1| GTPase YqeH [Lactobacillus acidophilus 30SC]
gi|327184018|gb|AEA32465.1| GTPase YqeH [Lactobacillus amylovorus GRL1118]
Length = 369
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 209/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG ++Q +PK GY P L+K R NE
Sbjct: 6 ICIGCGAVLQSDDPKKAGYL--PKSALDKAR--------NE------------------- 36
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
E +EV C RC LRHY ++ V + N DF L S S +++V+
Sbjct: 37 ENAEV-------YCQRCFRLRHYNEIMPVDLNN--DDF------LALLNSLSEKKALVVN 81
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF S + + V GN +LV K DL P + ++
Sbjct: 82 VVDLFDFSNSLLSSLKRFVG---------------GN--DFILVGNKFDLFPKNSRQSKI 124
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+RQ A G+ ++ VSA + L+SLI ++ + +V+ +G N GKSTL
Sbjct: 125 KDWMRQEANRMGLYP-KEIFLVSAKRKVNLESLIA-YINKQSQDKDVYFVGTTNVGKSTL 182
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + G+ +N++ T + PGTTL R+E L L DTPG++ N
Sbjct: 183 INAIIDMM-------GDIQNLI---TTSRFPGTTLD--RIEIPLENGHFLIDTPGIMTDN 230
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ T L ++ +L++ K LKP TY++ G+++ +AGL R+D + ES TV+ +
Sbjct: 231 QLATHLNAKDLELISPKKPLKPATYQLMPGNTLFLAGLGRIDYLKG--ESTSFTVYVARD 288
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEEL-GKWVRKEFHVSGSSWDSSSVDIAA 501
+ +H KT NA EKH G L PP + ++ L G+ R E+ D+
Sbjct: 289 MYVHRTKTANADAFYEKHVGELLAPPAKDDKLPALKGQEYRTEY----------KSDLLF 338
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
G+G+ +V + +T +G+ + +R AL+
Sbjct: 339 GGIGFVTV--PEGCVVKTYTPDGIGLGIRRALI 369
>gi|154686827|ref|YP_001421988.1| GTP-binding protein YqeH [Bacillus amyloliquefaciens FZB42]
gi|154352678|gb|ABS74757.1| YqeH [Bacillus amyloliquefaciens FZB42]
Length = 366
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 209/455 (45%), Gaps = 96/455 (21%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
VC GCGV +Q + + GY P +L K EN
Sbjct: 5 VCIGCGVTIQTEDKQGLGY--APKASLTK-----------------------------EN 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFD---HTVGRKLMSASGARSV 199
V+C RC L++Y +++DV+ L D DF HT+G S+
Sbjct: 34 -----------VICQRCFRLKNYNEIQDVS----LTDDDFLNILHTIG-------DTDSL 71
Query: 200 VLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSP 259
++ VVD DF+GS+ + + V G P ++LV K D+LP S+
Sbjct: 72 IVKVVDIFDFNGSWINGLNRFV----------------GGNP-IILVGNKADILPKSVKR 114
Query: 260 TRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGK 319
R W+++ A+E G+ + + +SA + G+K +ID + R +V+ +G N GK
Sbjct: 115 ERLVQWMKREAKEYGLKPL-DVFLISASRGQGMKEVIDAIEHYREGR-DVYVVGCTNVGK 172
Query: 320 STLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLL 379
ST +N I K V E+NI+ T + PGTTL + + L + L+DTPG++
Sbjct: 173 STFINRIIKEVSG-------EENII---TTSQFPGTTLDAIEIP--LDDGSALYDTPGII 220
Query: 380 HPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWA 439
+ +Q+ + + + K++ KELKPRT+++ +++ GL R D S + +
Sbjct: 221 NHHQMAHYVDKRDLKVLTPKKELKPRTFQLNEKQTLYFGGLARFDY--VSGDKTAFVCYM 278
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
L +H K ENA + EKH G L PP G+ ++E + F + DI
Sbjct: 279 PNELMIHRTKLENADDLYEKHAGELLTPP-GKDHLDEFPELTPHTFTIK-----EGKTDI 332
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +V+ + + + + +GV + +R +L+
Sbjct: 333 VFSGLGWVTVQ-QADKKITAYAPKGVHVFVRRSLI 366
>gi|304403895|ref|ZP_07385557.1| ribosome biogenesis GTPase YqeH [Paenibacillus curdlanolyticus YK9]
gi|304346873|gb|EFM12705.1| ribosome biogenesis GTPase YqeH [Paenibacillus curdlanolyticus YK9]
Length = 375
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 206/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q T+ + GY P+ +V
Sbjct: 13 CAGCGVKLQTTDKELSGYI--PASAAERV------------------------------- 39
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
P +C RC +++Y VT++ DF R L + S+V+ +
Sbjct: 40 ---------PAICQRCFRIKNYNDASTVTIDQ--DDF------LRLLGGIASTDSLVVHI 82
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS + + V G+ P V+LVV KIDLLP +++ R
Sbjct: 83 VDLFDFEGSVISGLQRFV----------------GSNP-VLLVVNKIDLLPKAVNYNRIR 125
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+WV+Q+A+E G+ K + SA +N G +++ + G+R +V+ +GA N GKSTL+
Sbjct: 126 NWVQQQAKEQGL-KTVDVVLCSAKRNIGFDRVVEAIEHFRGRR-DVYVVGATNVGKSTLI 183
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I + + ++ + LT + PGTTL V + L + DTPG+++ ++
Sbjct: 184 NRIIQ----------DYSDLDAELTTSRYPGTTLDAVHIP--LDDGKSIIDTPGIVYSHR 231
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+T + R + + +K +KP Y++ G ++ + L R D +S T++ S L
Sbjct: 232 MTELVPRSVLQAILPDKPIKPLVYQLNEGQTMFVGALARFDFVSGDRQSF--TLYISNGL 289
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHV-SGSSWDSSSVDIAAA 502
+H K E A + H G L PP E+ ++EL W R + G + D+ +
Sbjct: 290 EVHRTKLERAEELYANHKGVLLSPPSVEE-LDELPAWTRHSLRIPRGGDY-----DVFVS 343
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW V A + V+ +GV +++R++L+
Sbjct: 344 GLGWMQVNGTSGALVDVYVPKGVKVLVRDSLM 375
>gi|281490709|ref|YP_003352689.1| GTP-binding protein [Lactococcus lactis subsp. lactis KF147]
gi|281374478|gb|ADA63999.1| GTP-binding protein [Lactococcus lactis subsp. lactis KF147]
Length = 401
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 140/466 (30%), Positives = 210/466 (45%), Gaps = 85/466 (18%)
Query: 75 DEATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGG 134
+E T + C GCG +Q + G+ P+ L K +A +
Sbjct: 14 NENTMEDLYCIGCGAKIQTEDKNALGFL--PAGALKK-------KIAERDQME------- 57
Query: 135 LVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSAS 194
+A +E SE + + C RC LRHY ++ + L D DF R L
Sbjct: 58 --AVQAGDEGSEASIKTEDLYCQRCFRLRHYNEIAPTS----LTDADF----LRLLKEIG 107
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
++++ VVD DF+GS + K+ GN +++V K D+LP
Sbjct: 108 QHDALIVNVVDIFDFNGSLIPNLHKLTG---------------GN--DLLMVANKRDVLP 150
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAG-----KRG-N 308
SL + W+R++A + K V++ +N DDV +L +RG +
Sbjct: 151 KSLKVGKLTAWLREQAASRSLK--PKDILVTSAQNK------DDVAELMEAIEYYRRGRD 202
Query: 309 VWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPA 368
V+ +G N GKSTL+NAI KS G E I T + PGTTL ++E L
Sbjct: 203 VYVVGVTNVGKSTLINAIIKS------ASGSEDVI----TTSRFPGTTLD--KIEIPLDE 250
Query: 369 QAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEES 428
+ L DTPG++H Q+ L E+ K V+ KE+KP+TY++ ++ GL R D
Sbjct: 251 DSALIDTPGIIHRGQMAHYLEPEDLKYVSPRKEIKPKTYQLNPEQTLFFGGLARFDF--I 308
Query: 429 SVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVS 488
S E +T + + +H K E A EKH G L P + K VR+EF ++
Sbjct: 309 SGERQGMTAYFDNEINVHRTKLEGATEFYEKHKGELLAPALVG------AKLVRREFKIT 362
Query: 489 GSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
S DI +GLGW VR+ +A + W EGVD+V+R AL+
Sbjct: 363 DKS------DIVFSGLGW--VRVPQKAVVAAWVPEGVDVVVRKALI 400
>gi|315653638|ref|ZP_07906558.1| GTP-binding protein [Lactobacillus iners ATCC 55195]
gi|315489000|gb|EFU78642.1| GTP-binding protein [Lactobacillus iners ATCC 55195]
Length = 370
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 203/451 (45%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++QD + K GY P NK+
Sbjct: 8 CIGCGSILQDKDSKLSGYM--PHSAFNKM------------------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+++ + V C RC LRHY ++ V N DF R L S +++++ V
Sbjct: 35 ---IQEPDTSVYCQRCFRLRHYNEITPVNENN--DDF------LRLLNSLGNKKALIVNV 83
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+ S + + + + NE VLV K+DL P + ++ +
Sbjct: 84 VDLFDFNNSLITSLDRFIGN----NE-------------FVLVGNKVDLFPKNSKESKIK 126
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ A +G+ K+ +SA+K + LI+ + GK +++ +G N GKSTL+
Sbjct: 127 DWMRQEANRNGLFP-KKIFLLSAIKKRNIDELIN-YLATKGKNEDIYFVGTTNVGKSTLI 184
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI ++ E KN++ T + PGTTL +++ L L DTPG+L Q
Sbjct: 185 NAIIET-------RSEYKNLI---TTSKFPGTTLDSIKIP--LNEGHYLVDTPGILSKKQ 232
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ +RLT E +LV K+LKP TY++ G +I +AGL R+D + T++ + L
Sbjct: 233 MASRLTGSELELVAPKKQLKPATYQLLPGQTIFLAGLGRIDFIKGPASGF--TIYVARDL 290
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH KT NA KH L PP ++LG + + S S DI G
Sbjct: 291 YLHRTKTINADEFYLKHKSDLLNPPCDS---DDLGALKGQLYSTSEKS------DILFGG 341
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+G+ +V + +T EG+ + +R AL+
Sbjct: 342 VGFITV--PSGVVIKAYTPEGIGLGIRRALI 370
>gi|16079621|ref|NP_390445.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
168]
gi|221310492|ref|ZP_03592339.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
168]
gi|221314816|ref|ZP_03596621.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221319738|ref|ZP_03601032.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221324016|ref|ZP_03605310.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
SMY]
gi|418032254|ref|ZP_12670737.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|428280060|ref|YP_005561795.1| GTP-binding protein YqeH [Bacillus subtilis subsp. natto BEST195]
gi|430756354|ref|YP_007208893.1| hypothetical protein A7A1_0862 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|449095062|ref|YP_007427553.1| GTP-binding protein [Bacillus subtilis XF-1]
gi|452915399|ref|ZP_21964025.1| ribosome biogenesis GTPase YqeH [Bacillus subtilis MB73/2]
gi|1730981|sp|P54453.1|YQEH_BACSU RecName: Full=Uncharacterized protein YqeH
gi|1303788|dbj|BAA12444.1| YqeH [Bacillus subtilis]
gi|2635013|emb|CAB14509.1| GTPase involved in ribosome 30S assembly [Bacillus subtilis subsp.
subtilis str. 168]
gi|291485017|dbj|BAI86092.1| GTP-binding protein YqeH [Bacillus subtilis subsp. natto BEST195]
gi|351471117|gb|EHA31238.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|407959815|dbj|BAM53055.1| GTP-binding protein YqeH [Bacillus subtilis BEST7613]
gi|407965390|dbj|BAM58629.1| GTP-binding protein YqeH [Bacillus subtilis BEST7003]
gi|430020874|gb|AGA21480.1| Hypothetical protein YqeH [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|449028977|gb|AGE64216.1| GTP-binding protein [Bacillus subtilis XF-1]
gi|452115747|gb|EME06143.1| ribosome biogenesis GTPase YqeH [Bacillus subtilis MB73/2]
Length = 366
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 194/388 (50%), Gaps = 62/388 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L++Y +++DV+ L D DF + L S+V+ +VD DF+GS+
Sbjct: 34 VICQRCFRLKNYNEIQDVS----LTDDDFLNI----LHGIGETDSLVVKIVDIFDFNGSW 85
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ ++V G P ++LV K D+LP SL R W+++ A+E
Sbjct: 86 INGLQRLV----------------GGNP-ILLVGNKADILPKSLKRERLIQWMKREAKEL 128
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ K + VSA + G++ +ID + + +V+ +G N GKST +N I K V
Sbjct: 129 GL-KPVDVFLVSAGRGQGIREVIDAIEHYRNGK-DVYVVGCTNVGKSTFINRIIKEVS-- 184
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
GEE I T + PGTTL + + L + L+DTPG+++ +Q+ + +++
Sbjct: 185 ----GEEDII----TTSQFPGTTLDAIEIP--LDDGSSLYDTPGIINNHQMAHYVNKKDL 234
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP---YLP----LH 446
K+++ KELKPRT+++ +++ GL R D YV+ SP Y+P +H
Sbjct: 235 KILSPKKELKPRTFQLNDQQTLYFGGLARFD---------YVSGERSPFICYMPNELMIH 285
Query: 447 MGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGW 506
K ENA + EKH G L PP G+ ++E + V F + DI +GLGW
Sbjct: 286 RTKLENADALYEKHAGELLTPP-GKDEMDEFPELVAHTFTIK-----DKKTDIVFSGLGW 339
Query: 507 FSVRLKGEAALGVWTYEGVDIVLRNALL 534
+V + + + +GV + +R +L+
Sbjct: 340 VTVH-DADKKVTAYAPKGVHVFVRRSLI 366
>gi|354582184|ref|ZP_09001086.1| ribosome biogenesis GTPase YqeH [Paenibacillus lactis 154]
gi|353199583|gb|EHB65045.1| ribosome biogenesis GTPase YqeH [Paenibacillus lactis 154]
Length = 374
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 184/382 (48%), Gaps = 46/382 (12%)
Query: 153 PVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS 212
PV+C RC +++Y + V V D D + R L G ++V+ +VD DF+GS
Sbjct: 39 PVICQRCFRIKNYNEASSVAV-------DQDEFL-RLLGQIGGKNALVIHIVDLFDFEGS 90
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + V GN P V+L V K DLLP + + +WV+++ +E
Sbjct: 91 LISGLQRFV----------------GNNP-VILAVNKTDLLPKVTNWNKVLNWVQKQCKE 133
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ K + SA KN G + L++ V G R +V+ +GA N GKS+L+N + +
Sbjct: 134 HGL-KTEDIVLCSAKKNQGFERLLETVAYHRGDR-DVYVVGATNVGKSSLINRLIR---- 187
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
+ ++ LT + PGTTL +V + L + DTPG+++P + + ++RE+
Sbjct: 188 ------DYSDLEQELTTSRYPGTTLDMVHIP--LDDGRDIIDTPGIVYPWRYSEIVSRED 239
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
+ V LKP Y++ G ++ G R D + +S T + S L +H K E
Sbjct: 240 LREVMPENPLKPAVYQLNEGQTLFFGGFARFDFVQGVHQSF--TCFISGRLNIHRTKLER 297
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A T+ E+H G L PP R+ EL +W R E + S D+ +GLGW V
Sbjct: 298 ADTLFEEHAGELLSPPT-RDRLAELPEWTRHEIRIP----KGSRTDVFISGLGWIKVNGD 352
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
A + V +GV ++ R +L+
Sbjct: 353 QGALVAVHAPKGVKVLARPSLI 374
>gi|42519513|ref|NP_965443.1| GTP-binding protein YqeH [Lactobacillus johnsonii NCC 533]
gi|41583801|gb|AAS09409.1| hypothetical protein LJ_1637 [Lactobacillus johnsonii NCC 533]
Length = 369
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 203/451 (45%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++QD +PK GY PS L K +S +NE
Sbjct: 7 CIGCGSILQDQDPKKSGYL--PSSALKKALESD------------------------DNE 40
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V C RC LRHY ++ V N DF L S S +++V+ V
Sbjct: 41 ----------VYCQRCFRLRHYNEIMPVEENN--DDF------LALLNSISQKKALVVNV 82
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF S + + + GN +LV K+DL P + ++ +
Sbjct: 83 VDLFDFSNSLISSIKRFIG---------------GN--EYILVGNKVDLFPKNSKESKIK 125
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ A +G+ K K+ VSA K L L+ + G++ +++ +G N GKSTL+
Sbjct: 126 DWMRQEANRNGL-KPEKIFLVSAAKKKNLDELMAFLAK-KGEKKDIYFVGTTNVGKSTLI 183
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + + K+++ T + PGTTL +++ L L DTPG+L+ NQ
Sbjct: 184 NAIINM-------NSDLKDVI---TTSKFPGTTLDEIKIP--LSNGHYLIDTPGILNANQ 231
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + L+ +E ++V K LKP TY++ G +I +AGL R D + S T++ + L
Sbjct: 232 LASHLSGKELEVVEPKKPLKPATYQLLPGQTIFLAGLGRFDYVDGP--SAGFTIYVARDL 289
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTENA EKH L PP E + LG + F S DI G
Sbjct: 290 YVHRTKTENADVFYEKHKDDLLLPPSKE---DNLGPLKGQTFSPKEKS------DILFGG 340
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+G+ + + +T EG+ + +R AL+
Sbjct: 341 VGFITT--PANVVVKAYTPEGIGLGIRRALI 369
>gi|395243805|ref|ZP_10420784.1| Ribosome biogenesis GTPase YqeH [Lactobacillus hominis CRBIP
24.179]
gi|394483855|emb|CCI81792.1| Ribosome biogenesis GTPase YqeH [Lactobacillus hominis CRBIP
24.179]
Length = 370
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 136/451 (30%), Positives = 204/451 (45%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++QDT+PK GY PS L K +E
Sbjct: 8 CIGCGSVLQDTDPKEAGYL--PSSALKKA---------------------------LNDE 38
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
S+V C RC LRHY ++ V+ N DF L S + +++V+ V
Sbjct: 39 GSDV-------YCQRCFRLRHYNEIMPVSENN--DDF------LALLNSIADKKALVVNV 83
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF S + + + GN +LV K+DL P + T+ +
Sbjct: 84 VDLFDFSNSLISSLKRFIG---------------GN--EYILVGNKVDLFPKNSKETKIK 126
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ A +G+ K K+ VSA K L LI+ + GK+ +++ +G N GKSTL+
Sbjct: 127 DWMRQEANRNGL-KPEKIFLVSAAKKKNLDELINFIAK-KGKKKDIYFVGTTNVGKSTLI 184
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI E ++ +T + PGTTL +++ L L DTPG+L Q
Sbjct: 185 NAIL----------SERSDLKDLITTSKFPGTTLDEIKIP--LDNGHYLIDTPGILSKKQ 232
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + LT +E ++V K LKP TY++ G +I +AGL R D + S T++ + L
Sbjct: 233 LASHLTGKELEVVEPKKPLKPATYQLLPGQTIFLAGLGRFDYIDGP--SAGFTLYVARDL 290
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTENA EKH L PP EK ++LG + F S D S DI G
Sbjct: 291 YVHRTKTENADQFYEKHKKDLLLPP-SEK--DDLGLLKGQTF-----SPDVKS-DILFGG 341
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+G+ + + +T + + + +R AL+
Sbjct: 342 VGFITT--PANVVVKAYTPDAIGLGIRRALI 370
>gi|421730914|ref|ZP_16170040.1| GTPase YqeH [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|407075068|gb|EKE48055.1| GTPase YqeH [Bacillus amyloliquefaciens subsp. plantarum M27]
Length = 366
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 209/455 (45%), Gaps = 96/455 (21%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
VC GCGV +Q + + GY P +L K EN
Sbjct: 5 VCIGCGVTIQTEDKQGLGY--APKASLTK-----------------------------EN 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFD---HTVGRKLMSASGARSV 199
V+C RC L++Y +++DV+ L D DF HT+G S+
Sbjct: 34 -----------VICQRCFRLKNYNEIQDVS----LTDDDFLNILHTIG-------DTDSL 71
Query: 200 VLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSP 259
++ VVD DF+GS+ + + V G P ++LV K D+LP S+
Sbjct: 72 IVKVVDIFDFNGSWINGLNRFV----------------GGNP-IILVGNKADILPKSVKR 114
Query: 260 TRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGK 319
R W+++ A+E G+ + + +SA + G+K +ID + R +V+ +G N GK
Sbjct: 115 ERLVQWMKREAKEYGLKPL-DVFLISASRGQGMKEVIDAIEHYREGR-DVYVVGCTNVGK 172
Query: 320 STLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLL 379
ST +N I K V E+NI+ T + PGTTL + + L + L+DTPG++
Sbjct: 173 STFINRIIKEVSG-------EENII---TTSQFPGTTLDAIEIP--LDDGSALYDTPGII 220
Query: 380 HPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWA 439
+ +Q+ + + + K++ KELKPRT+++ +++ GL R D S + +
Sbjct: 221 NHHQMAHYVDKRDLKVLTPKKELKPRTFQLNEKQTLYFGGLARFDY--VSGDKTAFVCYM 278
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
L +H K ENA + +KH G L PP G+ ++E + F + DI
Sbjct: 279 PNELMIHRTKLENADALYDKHAGELLTPP-GKDHLDEFPELTAHTFTIK-----EGKTDI 332
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +V+ + + + + +GV + +R +L+
Sbjct: 333 VFSGLGWVTVQ-QADKKITAYAPKGVHVFVRRSLI 366
>gi|389853433|ref|YP_006355677.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris
NZ9000]
gi|300069855|gb|ADJ59255.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 401
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 211/466 (45%), Gaps = 85/466 (18%)
Query: 75 DEATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGG 134
+E T + C GCG +Q + G+ P+ L K + ++
Sbjct: 14 NENTMEDLYCIGCGAKIQTEDKNALGFL--PAGALKKKKA----------------ERDQ 55
Query: 135 LVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSAS 194
+ +A +E SE + + C RC LRHY ++ + L D DF R L
Sbjct: 56 MEAVQAGDEGSEAFVKNEDLYCQRCFRLRHYNEIAPTS----LTDADF----LRLLKEIG 107
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
++++ VVD DF+GS + K+ GN +++V K D+LP
Sbjct: 108 QHNALIVNVVDIFDFNGSLIPNLHKLTG---------------GN--DLLMVANKRDVLP 150
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAG-----KRG-N 308
SL + W+R++A G+ K +++ +N DDV +L +RG +
Sbjct: 151 KSLKVGKMTAWLREQAASRGLK--PKDILITSAQNK------DDVAELMEAIEHYRRGRD 202
Query: 309 VWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPA 368
V+ +G N GKSTL+NAI KS G E I T + PGTTL ++E L
Sbjct: 203 VYVVGVTNVGKSTLINAIIKS------ASGSEDVI----TTSRFPGTTLD--KIEIPLDE 250
Query: 369 QAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEES 428
+ L DTPG++H Q+ L E+ K V+ KE+ P+TY++ ++ GL R D
Sbjct: 251 DSALIDTPGIIHRGQMAHYLEPEDLKYVSPRKEINPKTYQLNPEQTLFFGGLARFDF--I 308
Query: 429 SVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVS 488
S E +T + + +H K E A EKH G L P + K VR+EF ++
Sbjct: 309 SGERQGMTAYFDNEINVHRTKLEGATEFYEKHKGELLAPALVG------AKLVRREFKIT 362
Query: 489 GSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
S DI +GLGW VR+ +A + W EGVD+V+R AL+
Sbjct: 363 DKS------DIVFSGLGW--VRVPQKAVVAAWVPEGVDVVVRKALI 400
>gi|407796155|ref|ZP_11143111.1| GTPase YqeH [Salimicrobium sp. MJ3]
gi|407019509|gb|EKE32225.1| GTPase YqeH [Salimicrobium sp. MJ3]
Length = 366
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 186/381 (48%), Gaps = 48/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L+HY +V+DV ++ L + S+V+ ++D DF+GS
Sbjct: 34 VICKRCFRLKHYNEVQDVDYDDD--------DFLEMLQQINDTDSLVVQLIDIFDFNGSL 85
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ ++ +GN P V+L K+DLLP S++ + E W+R+ A+E
Sbjct: 86 IPGLNRL----------------TGNNP-VILAANKMDLLPKSVNLNKVEKWLRREAKEA 128
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ + +H +SA N G+ L ++ R +V+ +G N GKSTL+N + ++
Sbjct: 129 GLL-VEDVHLISASTNQGIDELAK-AIEQKRSRKDVFVVGTTNVGKSTLINEL---INRS 183
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
G I +T + PGTTLG + + L + L+DTPG++ +Q+ ++ E+
Sbjct: 184 TG-------IKDAITTSYFPGTTLGFIDIP--LDDHSSLYDTPGVIQRHQLAHYVSDEDL 234
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
KL+ KE+K + Y++ ++ GL RMD + S + S +P+H K E A
Sbjct: 235 KLITPQKEIKAKIYQLNEEQTLFFGGLARMDFVKGEHSSF--VCYLSNRIPIHRTKMEKA 292
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ E G L PP E + +L +W R+ F + D+ +GLGW + +G
Sbjct: 293 GHITENRIGEMLVPP-DENSLSKLPQWKRQTFRIP-----EGKHDVVISGLGWIMIP-EG 345
Query: 514 EAALGVWTYEGVDIVLRNALL 534
E + + EGV I LR +L+
Sbjct: 346 EVTVHIHAPEGVKISLRESLI 366
>gi|227889535|ref|ZP_04007340.1| GTP-binding protein [Lactobacillus johnsonii ATCC 33200]
gi|227850013|gb|EEJ60099.1| GTP-binding protein [Lactobacillus johnsonii ATCC 33200]
Length = 369
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 203/451 (45%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++QD +PK GY PS L K +S +NE
Sbjct: 7 CIGCGSILQDQDPKKSGYL--PSSALKKALESD------------------------DNE 40
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V C RC LRHY ++ V N DF L S S +++V+ V
Sbjct: 41 ----------VYCQRCFRLRHYNEIMPVEENN--DDF------LALLNSISQKKALVVNV 82
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF S + + + GN +LV K+DL P + ++ +
Sbjct: 83 VDLFDFSNSLISSIKRFIG---------------GN--EYILVGNKVDLFPKNSKESKIK 125
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ A +G+ K K+ VSA K L L+ + G++ +++ +G N GKSTL+
Sbjct: 126 DWMRQEANRNGL-KPEKIFLVSAAKKKNLDELMAFLAK-KGEKKDIYFVGTTNVGKSTLI 183
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + + K+++ T + PGTTL +++ L L DTPG+L+ NQ
Sbjct: 184 NAIINM-------NSDLKDVI---TTSKFPGTTLDEIKIP--LSNGHYLIDTPGILNANQ 231
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + L+ +E ++V K LKP TY++ G +I +AGL R D + S T++ + L
Sbjct: 232 LASHLSGKELEVVEPKKPLKPATYQLLPGQTIFLAGLGRFDYVDGP--SAGFTIYVARDL 289
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTENA EKH L PP E + LG + F S DI G
Sbjct: 290 YVHRTKTENADAFYEKHKDDLLLPPSKE---DNLGPLKGQTFSPKEKS------DILFGG 340
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+G+ + + +T EG+ + +R AL+
Sbjct: 341 VGFITT--PANVVVKAYTPEGIGLGIRRALI 369
>gi|300173713|ref|YP_003772879.1| GTP-binding protein yqeH [Leuconostoc gasicomitatum LMG 18811]
gi|333447983|ref|ZP_08482925.1| GTPase YqeH [Leuconostoc inhae KCTC 3774]
gi|299888092|emb|CBL92060.1| GTP-binding protein yqeH [Leuconostoc gasicomitatum LMG 18811]
Length = 382
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 198/451 (43%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +MQ + GY P L K S
Sbjct: 21 CIGCGAVMQVVDSSKAGYL--PMSALKKSIDS---------------------------- 50
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ ++C RC LRHY +++ V L D DF R L S A+++++ V
Sbjct: 51 --------EELLCQRCFKLRHYNEIQPVE----LTDDDF----SRLLHQISDAKALIVYV 94
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D D GS ++A + ++N +++V K+DLLP L+ R +
Sbjct: 95 IDVFDVTGS---EIAGLPRFVGQDNP-------------ILVVANKVDLLPKLLNKNRLK 138
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+W++ + GI K + SA L L+D + + R +V+ +G N GKSTL+
Sbjct: 139 NWLQVELKAQGI-KPVDIFLTSATHPKNLDDLLDTIDNYREGR-DVYVVGVTNVGKSTLI 196
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I KS G G + +T + PGTTL R+E L +L DTPG++ +Q
Sbjct: 197 NQIIKS---GTG-------VQDLITTSRFPGTTLD--RIEIPLADGRQLIDTPGIVKRDQ 244
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
IT L ++ K E+KPRTY++ A +I I GL R D E E +T + L
Sbjct: 245 ITHVLADKDLKYALPKNEIKPRTYQLNAEQTIFIGGLARFDFELG--ERTPITAYFENNL 302
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A +KH G L P E + L +R EF+++ S DI AG
Sbjct: 303 SLHRTKLIGADDFYDKHAGELLTPSPQESTITNL---IRHEFNITEKS------DIVFAG 353
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW S+ + W +GV +++R A++
Sbjct: 354 LGWISI--PAGIKIAGWAPQGVSVLIRKAMI 382
>gi|62719448|gb|AAX93324.1| GTPase [Lactobacillus sanfranciscensis]
Length = 377
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 202/451 (44%), Gaps = 90/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+QDT+ GY +S L+ G L
Sbjct: 17 CIGCGALIQDTDKDKAGY-------------------TPKSAIEKGLESGELY------- 50
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
C RC LRHY +++ V V D +F H +G+ S+V+ V
Sbjct: 51 ------------CQRCFRLRHYNEIQPVDVS----DDEFLHLLGK----IGDTDSLVVYV 90
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD D +GS + + V GN P +++V K+DLLPSS ++ +
Sbjct: 91 VDIFDVNGSIIPGIQRFV----------------GNNP-ILVVGNKVDLLPSSFKESKIK 133
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ + GI I + VSA N + L++ V+ K +V+ +G N GKSTL+
Sbjct: 134 DWLRQMMNKAGIKPI-DIELVSAKTNRSVDDLLE-VIKKYQKNRDVYVVGVTNVGKSTLI 191
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I G+E+ I T + PGTTL ++++ L L DTPG++H +Q
Sbjct: 192 NQIIHQ------ASGQEQVI----TTSKFPGTTLDMIKIP--LDDGHDLIDTPGVIHASQ 239
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ ++ K V+ K +KP+ Y++ G ++ + + R D + V V + L
Sbjct: 240 MAHYLSPKDLKYVSPQKRIKPKVYQLNDGQTLFLGAIGRFDYVKGPKTGFTVNVDNN--L 297
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTENA + G L P+G++ V L R EF V +S D+ G
Sbjct: 298 MIHRTKTENADEFLINMPGEXLNXPLGKENVVPLQ---RHEFKVEDTS------DLVIEG 348
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V KG G W +GV +++R A+
Sbjct: 349 LGWVTVP-KGSIIAG-WAPKGVSVLIRKAMF 377
>gi|398311510|ref|ZP_10514984.1| GTPase YqeH [Bacillus mojavensis RO-H-1]
Length = 366
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 190/381 (49%), Gaps = 48/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L++Y +++DV+ L D DF + L S+V+ +VD DF+GS+
Sbjct: 34 VICQRCFRLKNYNEIQDVS----LTDDDFLNI----LHGIGETDSLVVKIVDIFDFNGSW 85
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ ++V G P ++LV K D+LP SL R W+++ A+E
Sbjct: 86 INGLQRLV----------------GGNP-ILLVGNKADILPKSLKRERLIQWMKREAKEL 128
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ I + VSA + G++ +ID + + +V+ +G N GKST +N I K V
Sbjct: 129 GLKPI-DVFLVSAGRGQGIREVIDAIEHYRNGK-DVYVVGCTNVGKSTFINRIIKEVSG- 185
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
E NI+ T + PGTTL + + L + L+DTPG+++ +Q+ + +++
Sbjct: 186 ------EDNII---TTSQFPGTTLDAIEIP--LDDGSALYDTPGIINHHQMAHYVNKKDL 234
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
K+++ KELKPRT+++ +++ GL R D S E + L +H K ENA
Sbjct: 235 KVLSPKKELKPRTFQLNDQQTLYFGGLARFDY--VSGERAAFVCYMPNELMIHRTKLENA 292
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ EKH G L PP G+ ++E + V F + DI +GLGW +V
Sbjct: 293 DALYEKHAGELLTPP-GKDDMDEFPELVAHTF-----TMKEQKTDIVFSGLGWVTVH-DA 345
Query: 514 EAALGVWTYEGVDIVLRNALL 534
+ + + +GV + +R +L+
Sbjct: 346 DKKITAYAPKGVHVFVRRSLI 366
>gi|381182528|ref|ZP_09891330.1| GTPase YqeH [Listeriaceae bacterium TTU M1-001]
gi|380317578|gb|EIA20895.1| GTPase YqeH [Listeriaceae bacterium TTU M1-001]
Length = 366
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 205/452 (45%), Gaps = 93/452 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q + PGY P +L K
Sbjct: 7 CIGCGAIIQSDDKSKPGY--APKSSLEK-------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGA-RSVVLM 202
+ V+C RC L+HY +++DV+ L D DF K+++ G+ +++++
Sbjct: 33 --------EQVICQRCFRLKHYNEIQDVS----LTDDDF-----LKILNDLGSQKALIVY 75
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DFDGS+ + + V GN P V+LV K DLLP SL +
Sbjct: 76 VVDIFDFDGSWLPGLHRFV----------------GNNP-VLLVGNKADLLPKSLKRDKL 118
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
++R RA++ G+ + T + +SA K +G +SL++ + +L +V+ +G N GKSTL
Sbjct: 119 TRYMRTRAKDLGL-RATDVALISAEKGYGFESLMEQIEELRDG-ADVFVVGCTNVGKSTL 176
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K E N++ T + PGTTL ++E L L DTPG+++ +
Sbjct: 177 INRIIKFATG-------ENNVI---TTSQFPGTTLD--KIEIPLEGNRVLVDTPGIINHH 224
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ + + KL+ KE+KP Y++ ++ L R+D E S V+ S
Sbjct: 225 QMAHFIGPKTLKLITPKKEIKPVVYQLNQSQTLFFGALARLDFTEGERSSF--IVYMSNQ 282
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L H K E A + E G L PP E+ V +L + V +F + DI +
Sbjct: 283 LEPHRTKLEKANHLYETQRGLILNPP-SEEDVADLPELVPHQFVI------REKADIVFS 335
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW V G + W +GV++ +R L+
Sbjct: 336 GLGWVCVP-SGHVKVTAWVPKGVNVTIREPLI 366
>gi|15672203|ref|NP_266377.1| GTP-binding protein YqeH [Lactococcus lactis subsp. lactis Il1403]
gi|12723078|gb|AAK04319.1|AE006260_2 GTP-binding protein [Lactococcus lactis subsp. lactis Il1403]
Length = 381
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 139/457 (30%), Positives = 205/457 (44%), Gaps = 85/457 (18%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q G+ P+ L K +A + +A +E
Sbjct: 3 CIGCGAKIQTEAKNALGFL--PAGALKK-------KIAERDQME---------AVQAGDE 44
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
SE + + C RC LRHY ++ + L D DF R L ++++ V
Sbjct: 45 GSEASIKTEDLYCQRCFRLRHYNEIAPTS----LTDADF----LRLLKEIGQHDALIVNV 96
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS + K+ GN +++V K D+LP SL +
Sbjct: 97 VDIFDFNGSLIPNLHKLTG---------------GN--DLLMVANKRDVLPKSLKVGKLT 139
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAG-----KRG-NVWAIGAQNA 317
W+R++A + K V++ +N DDV +L +RG +V+ +G N
Sbjct: 140 AWLREQAASRSLK--PKDILVTSAQNK------DDVAELMEAIEYYRRGRDVYVVGVTNV 191
Query: 318 GKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPG 377
GKSTL+NAI KS G E I T + PGTTL ++E L + L DTPG
Sbjct: 192 GKSTLINAIIKS------ASGSEDVI----TTSRFPGTTLD--KIEIPLDEDSALIDTPG 239
Query: 378 LLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTV 437
++H QI L E+ K V+ KE+KP+TY++ ++ GL R D S E +T
Sbjct: 240 IIHRGQIAHYLEPEDLKYVSPRKEIKPKTYQLDPEQTLFFGGLARFDF--ISGERQGMTA 297
Query: 438 WASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSV 497
+ + +H K E A EKH G L P + K VR+EF ++ S
Sbjct: 298 YFDNEINVHRTKLEGATEFYEKHKGELLAPALVG------AKLVRREFKITDKS------ 345
Query: 498 DIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
DI +GLGW VR+ +A + W EGVD+V+R AL+
Sbjct: 346 DIVFSGLGW--VRVPQKAVVAAWVPEGVDVVVRKALI 380
>gi|125623108|ref|YP_001031591.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris
MG1363]
gi|124491916|emb|CAL96837.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
MG1363]
Length = 381
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 136/457 (29%), Positives = 207/457 (45%), Gaps = 85/457 (18%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q + G+ P+ L K + ++ + +A +E
Sbjct: 3 CIGCGAKIQTEDKNALGFL--PAGALKKKKA----------------ERDQMEAVQAGDE 44
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
SE + + C RC LRHY ++ + L D DF R L ++++ V
Sbjct: 45 GSEAFVKNEDLYCQRCFRLRHYNEIAPTS----LTDADF----LRLLKEIGQHNALIVNV 96
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS + K+ GN +++V K D+LP SL +
Sbjct: 97 VDIFDFNGSLIPNLHKLTG---------------GN--DLLMVANKRDVLPKSLKVGKMT 139
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAG-----KRG-NVWAIGAQNA 317
W+R++A G+ K +++ +N DDV +L +RG +V+ +G N
Sbjct: 140 AWLREQAASRGLK--PKDILITSAQNK------DDVAELMEAIEHYRRGRDVYVVGVTNV 191
Query: 318 GKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPG 377
GKSTL+NAI KS G E I T + PGTTL ++E L + L DTPG
Sbjct: 192 GKSTLINAIIKS------ASGSEDVI----TTSRFPGTTLD--KIEIPLDEDSALIDTPG 239
Query: 378 LLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTV 437
++H Q+ L E+ K V+ KE+ P+TY++ ++ GL R D S E +T
Sbjct: 240 IIHRGQMAHYLEPEDLKYVSPRKEINPKTYQLNPEQTLFFGGLARFDF--ISGERQGMTA 297
Query: 438 WASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSV 497
+ + +H K E A EKH G L P + K VR+EF ++ S
Sbjct: 298 YFDNEINVHRTKLEGATEFYEKHKGELLAPALVG------AKLVRREFKITDKS------ 345
Query: 498 DIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
DI +GLGW VR+ +A + W EGVD+V+R AL+
Sbjct: 346 DIVFSGLGW--VRVPQKAVVAAWVPEGVDVVVRKALI 380
>gi|407718715|ref|YP_006796120.1| GTPase YqeH [Leuconostoc carnosum JB16]
gi|407242471|gb|AFT82121.1| GTPase YqeH [Leuconostoc carnosum JB16]
Length = 381
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 197/451 (43%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG LMQ T P++ GY P L K A +SE
Sbjct: 20 CVGCGALMQITEPQNAGYL--PLSALKK---------AIDSE------------------ 50
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ C RC LRHY +++ V L D DF L S +S+++ V
Sbjct: 51 ---------ELFCQRCFRLRHYNEIQPVE----LTDDDF----ADLLHQISDTKSLIVYV 93
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D D GS + + V G +++V KIDLLP L+ R +
Sbjct: 94 MDVFDVTGSEISGLPRFV----------------GQDNPILVVANKIDLLPKLLNKRRLK 137
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+W++ + GI + SA L L++ + DL R +V+ +G N GKSTL+
Sbjct: 138 NWLQAELKSQGIQP-ADIFLTSATHPKNLDDLLETIDDLRQDR-DVYVVGVTNVGKSTLI 195
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I KS R G I +T + PGTTL R+ L L DTPG++ +Q
Sbjct: 196 NQIIKS----RTG------IQDLITTSRFPGTTLD--RIVIPLSDGKDLIDTPGIIKRDQ 243
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ ++ K E+KPRTY++ ++ I GL R D E S E +T + L
Sbjct: 244 MAYVLSNKDLKYALPKNEIKPRTYQLNPEQTLFIGGLARFDFE--SGERTAITAYFENNL 301
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A + +KH G LQP EL ++ EF+V+ S DI +G
Sbjct: 302 KLHRTKLAGADELYDKHVGELLQPAPSGISTHEL---IKHEFNVTEKS------DIVFSG 352
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V + + W +GV +++R A++
Sbjct: 353 LGWMTV--PADIKVSGWAPKGVSVLIRKAMI 381
>gi|350266771|ref|YP_004878078.1| hypothetical protein GYO_2837 [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599658|gb|AEP87446.1| YqeH [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 366
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 195/388 (50%), Gaps = 62/388 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L++Y +++DV+ L D DF + L S+V+ +VD DF+GS+
Sbjct: 34 VICQRCFRLKNYNEIQDVS----LTDDDFLNI----LHGIGETDSLVVKIVDIFDFNGSW 85
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ ++V G P ++LV K D+LP SL R W+++ A+E
Sbjct: 86 INGLQRLV----------------GGNP-ILLVGNKADILPKSLKRERLIQWMKREAKEL 128
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ K + VSA + G++ +ID + + +V+ +G N GKST +N + K V
Sbjct: 129 GL-KPVDVFLVSAGRGQGIREVIDAIEHYRNGK-DVYVVGCTNVGKSTFINRVIKEVS-- 184
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
GEE I T + PGTTL + + L + L+DTPG+++ +Q+ + +++
Sbjct: 185 ----GEEDII----TTSQFPGTTLDAIEIP--LDDGSALYDTPGIINHHQMAHYVNKKDL 234
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP---YLP----LH 446
K+++ KELKPRT+++ +++ GL R D YV+ SP Y+P +H
Sbjct: 235 KILSPKKELKPRTFQLNDQQTLYFGGLARFD---------YVSGERSPFICYMPNELMIH 285
Query: 447 MGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGW 506
K ENA + EKH G L PP G+ ++E + V F + + DI +GLGW
Sbjct: 286 RTKLENADALYEKHAGELLTPP-GKDEMDEFPELVAHTFTIK-----DTKTDIVFSGLGW 339
Query: 507 FSVRLKGEAALGVWTYEGVDIVLRNALL 534
+V + + + +GV + +R +L+
Sbjct: 340 VTVH-DADKKVTAYAPKGVHVFVRRSLI 366
>gi|58337796|ref|YP_194381.1| GTP-binding protein YqeH [Lactobacillus acidophilus NCFM]
gi|227904446|ref|ZP_04022251.1| GTP-binding protein [Lactobacillus acidophilus ATCC 4796]
gi|58255113|gb|AAV43350.1| GTP-binding protein [Lactobacillus acidophilus NCFM]
gi|227867821|gb|EEJ75242.1| GTP-binding protein [Lactobacillus acidophilus ATCC 4796]
Length = 369
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 206/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG ++Q +PK GY P L+K ++ E
Sbjct: 6 ICVGCGAILQSDDPKKAGYL--PKSALDKAKR--------------------------EE 37
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
T V C RC LRHY ++ V + N DF L S S +++V+
Sbjct: 38 NTD--------VYCQRCFRLRHYNEIMPVDLNN--DDF------LALLNSLSEKKALVVN 81
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF S + + V + +LV K DL P + ++
Sbjct: 82 VVDLFDFSNSLLSSLKRFVGNN-----------------DFILVGNKFDLFPKNSKQSKI 124
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+RQ A G+ + VSA K L+SLI + D + + +V+ +G N GKSTL
Sbjct: 125 KDWMRQEANRMGLYP-KDIFLVSAKKKVNLESLISYINDHSQDK-DVYFVGTTNVGKSTL 182
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + GD I +T + PGTTL ++E L L DTPG++ N
Sbjct: 183 INAIIDMM-----GD-----IQDLITTSRFPGTTLD--QIEIPLENGHFLIDTPGIMTDN 230
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ T L ++ +LV+ K LKP TY++ G+++ +AGL R+D + ES TV+ +
Sbjct: 231 QLATHLNAKDLELVSPKKPLKPATYQLLPGNTLFLAGLGRIDFLKG--ESTSFTVYVARD 288
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEEL-GKWVRKEFHVSGSSWDSSSVDIAA 501
+ +H KT NA EKH G L PP + ++ L GK R ++ D+
Sbjct: 289 MYVHRTKTANADAFYEKHKGELLTPPSADDQMAPLKGKEFRTDY----------KSDLLF 338
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
G+G+ +V KG + +T +G+ + +R AL+
Sbjct: 339 GGIGFVTVP-KG-CVVKTYTPDGIGLGIRRALI 369
>gi|365157946|ref|ZP_09354190.1| ribosome biogenesis GTPase YqeH [Bacillus smithii 7_3_47FAA]
gi|363622356|gb|EHL73522.1| ribosome biogenesis GTPase YqeH [Bacillus smithii 7_3_47FAA]
Length = 368
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 214/455 (47%), Gaps = 98/455 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q +P+ GY P L K
Sbjct: 8 CTGCGVKIQTEDPEKVGY--TPPSALQK-------------------------------- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFD---HTVGRKLMSASGARSVV 200
+ VVC RC L+HY +++DV+ L D DF HT+G +S++
Sbjct: 34 --------EQVVCQRCFRLKHYNEIQDVS----LTDDDFLKILHTLGE-------TKSLI 74
Query: 201 LMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPT 260
+ +VD DF+GS+ + + V GN P V+L+ K DLLP SL
Sbjct: 75 VKIVDIFDFNGSWLPGLPRFV----------------GNNP-VLLIGNKEDLLPKSLKRE 117
Query: 261 RFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDL-AGKRGNVWAIGAQNAGK 319
R +W+++ A + G+ I + VSA K ++ ++ + AGK +V+ +G N GK
Sbjct: 118 RLINWMKKEAEKLGLRPIDVI-LVSASKGHFIREAMEMIEHYRAGK--DVYVVGCTNVGK 174
Query: 320 STLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLL 379
ST +N I K ++G G+ +T + PGTTL ++E L + L DTPG++
Sbjct: 175 STFINRILK--ESGESGE--------LITTSHFPGTTLD--KIEIPLEDGSALIDTPGII 222
Query: 380 HPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWA 439
+ +Q+ + + + K++ KE+KP+ Y++ ++ GL R+D + S+ +
Sbjct: 223 NHHQMAHFVDKRDLKIIMPKKEIKPKVYQLNEKQTLFFGGLSRLDYLKGGRRSL--VCYM 280
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
L +H K E A ++ EKH G L PP E+++++ +R EF ++ + DI
Sbjct: 281 PNELQIHRTKLEKADSLYEKHVGEMLVPP-REEQLDDFPPLIRHEFKIT-----DAKTDI 334
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +V G A + + +GV +++R +L+
Sbjct: 335 VFSGLGWVTVHEPG-AVVAAYVPKGVSVLIRKSLI 368
>gi|317128279|ref|YP_004094561.1| ribosome biogenesis GTPase YqeH [Bacillus cellulosilyticus DSM
2522]
gi|315473227|gb|ADU29830.1| ribosome biogenesis GTPase YqeH [Bacillus cellulosilyticus DSM
2522]
Length = 372
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 214/457 (46%), Gaps = 99/457 (21%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG+ +Q P + GY KS L
Sbjct: 10 ICSGCGISIQTEEPNNLGY----------APKSAL------------------------- 34
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVL 201
T EV ++C RC L+HY +V+DV L D DF K+++ G + ++++
Sbjct: 35 -TREV------IICQRCFKLKHYNEVQDVP----LTDDDF-----LKILNELGKKNALIV 78
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
VVD DFDGS+ + + + V GN P ++LV K+DLLP S+ +
Sbjct: 79 KVVDIFDFDGSWLQGLPRFV----------------GNNP-ILLVGNKVDLLPKSVKRNK 121
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGL---KSLIDDVVDLAGKRG-NVWAIGAQNA 317
+W++ ++ G+ K +H +SA G+ SLID + G +V+ +G+ N
Sbjct: 122 LVNWMKWASKNYGL-KPADIHLMSAETGEGVMETASLID-----KWREGRDVYVVGSTNV 175
Query: 318 GKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPG 377
GKST +N + K G D E +T + +PGTTL ++ + L A LFDTPG
Sbjct: 176 GKSTFINRLLKEF----GADDE-----FLITTSNIPGTTLDMIDIP--LDDGASLFDTPG 224
Query: 378 LLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTV 437
+++ +Q+ RL + E K+++ KE+KP +++ ++ GL R+D + S
Sbjct: 225 IINHHQMAHRLNKNELKVISPRKEVKPTVFQLNDQQTLFFGGLARLDFLQGEGRSF--VC 282
Query: 438 WASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSV 497
+ S L +H K E A + E H G L PP E V+ + V+KE+ ++
Sbjct: 283 YFSNELNIHRTKLEKADQLFENHLGELLTPPFKE-NVDSFPELVKKEWKLT-----EEKQ 336
Query: 498 DIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
DI +GLGW +V KG A + + +GV + +R ++
Sbjct: 337 DIVISGLGWVTVHGKG-AQIRTFAPKGVHVSIRPSIF 372
>gi|260103146|ref|ZP_05753383.1| GTP-binding protein [Lactobacillus helveticus DSM 20075]
gi|417009774|ref|ZP_11945910.1| GTPase YqeH [Lactobacillus helveticus MTCC 5463]
gi|260083056|gb|EEW67176.1| GTP-binding protein [Lactobacillus helveticus DSM 20075]
gi|328464795|gb|EGF36110.1| GTPase YqeH [Lactobacillus helveticus MTCC 5463]
Length = 369
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 209/453 (46%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG ++Q +P+ GY L KG L +A+N
Sbjct: 6 ICIGCGAVLQSDDPQKAGY----------------------------LPKGALE--KAKN 35
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
E V C RC LRHY ++ V + N DF L S + +++++
Sbjct: 36 E------ENTDVYCQRCFKLRHYNEIMPVDLNN--DDF------LALLNSLAEKKALIVN 81
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF S + + V + +LV K DL P + ++
Sbjct: 82 VVDLFDFSNSLLSSLKRFVGNN-----------------DFILVGNKFDLFPKNSKQSKI 124
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+RQ A G+ + VSA K L+SLI + D + + +V+ +G N GKSTL
Sbjct: 125 KDWMRQEANRMGLYP-KDIFLVSAKKKLNLESLISYINDQSQDK-DVYFVGTTNVGKSTL 182
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + G+ +N++ T + PGTTL ++E L L DTPG++ N
Sbjct: 183 INAIIDMM-------GDIQNLI---TTSRFPGTTLD--QIEIPLENGHFLIDTPGIMTDN 230
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ T L ++ +L++ K LKP TY++ G+++ +AGL R+D + ES TV+ +
Sbjct: 231 QLATHLNAKDLELISPKKPLKPATYQLLPGNTLFLAGLGRIDYLKG--ESTSFTVYVARN 288
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEEL-GKWVRKEFHVSGSSWDSSSVDIAA 501
+ +H KT NA EKH G L PP + ++ L GK + EF D+
Sbjct: 289 MYVHRTKTTNADAFYEKHKGELLAPPSPDDQMAPLKGKEFKTEF----------KSDLLF 338
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
G+G+ +V KG + +T +G+ + +R AL+
Sbjct: 339 GGIGFVTVP-KG-CLVKTYTPDGIGLGIRRALI 369
>gi|222152534|ref|YP_002561709.1| GTP-binding protein YqeH [Streptococcus uberis 0140J]
gi|222113345|emb|CAR40947.1| GTP-binding protein [Streptococcus uberis 0140J]
Length = 372
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 189/388 (48%), Gaps = 60/388 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
+ C RC LRHY ++ DV + D + L + ++V+ VVD DF+GS
Sbjct: 38 LYCQRCFRLRHYNEITDVHIT--------DDEFLKLLHEVGDSDALVVNVVDIFDFNGSI 89
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+++ V+ GN V+LV K D+LP S+ ++ W+ +RA E+
Sbjct: 90 IPGLSRFVA---------------GN--DVLLVGNKKDILPKSVKDSKVTQWLIERAYEE 132
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ + + SA + +K LI + L R +V+ +G N GKSTL+NAI + +
Sbjct: 133 GLRPV-DVFLTSAQNKYAIKELISRIDQLRKGR-DVYVVGVTNVGKSTLINAIIQEITG- 189
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
+K+I+ T + PGTTL ++E L + +FDTPG++H +Q+ L+ ++
Sbjct: 190 ------DKDII---TTSRFPGTTLD--KIEIPLDDGSFIFDTPGIIHRHQMAHYLSDKDL 238
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
K V+ KE+KP+TY++ ++ + GL R D S E T + L +H K E A
Sbjct: 239 KYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--VSGEKQGFTAYFDNNLKIHRTKLEGA 296
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWD---SSSVDIAAAGLGWFSVR 510
+KH G L PP + KE SS+D +S +D+ +GLGW +R
Sbjct: 297 SDFYQKHLGSLLLPP----------NHIDKESFPKLSSFDFTINSKMDLVFSGLGW--IR 344
Query: 511 LKGE----AALGVWTYEGVDIVLRNALL 534
+ G + W EGV ++ R A++
Sbjct: 345 INGSEDKPVKITAWAPEGVAVLTRKAII 372
>gi|296333274|ref|ZP_06875727.1| GTP-binding protein YqeH [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675222|ref|YP_003866894.1| ribosome 30S assembly GTPase [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296149472|gb|EFG90368.1| GTP-binding protein YqeH [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413466|gb|ADM38585.1| GTPase involved in ribosome 30S assembly [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 366
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 195/388 (50%), Gaps = 62/388 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L++Y +++DV+ L D DF + L S+V+ +VD DF+GS+
Sbjct: 34 VICQRCFRLKNYNEIQDVS----LTDDDFLNI----LHGIGETDSLVVKIVDIFDFNGSW 85
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ ++V G P ++LV K D+LP SL R W+++ A+E
Sbjct: 86 INGLQRLV----------------GGNP-ILLVGNKADILPKSLKRERLIQWMKREAKEL 128
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ K + VSA + G++ +ID + + +V+ +G N GKST +N + K V
Sbjct: 129 GL-KPVDVFLVSAGRGQGIREVIDAIEHYRNGK-DVYVVGCTNVGKSTFINRVIKEVS-- 184
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
GEE I T + PGTTL + + L + L+DTPG+++ +Q+ + +++
Sbjct: 185 ----GEEDII----TTSQFPGTTLDAIEIP--LDDGSALYDTPGIINHHQMAHYVNKKDL 234
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP---YLP----LH 446
K+++ KELKPRT+++ +++ GL R D Y++ SP Y+P +H
Sbjct: 235 KILSPKKELKPRTFQLNDQQTLYFGGLARFD---------YISGERSPFICYMPNELMIH 285
Query: 447 MGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGW 506
K ENA + EKH G L PP G+ ++E + V F + + DI +GLGW
Sbjct: 286 RTKLENADALYEKHAGELLTPP-GKDEMDEFPELVAHTFTIK-----DTKTDIVFSGLGW 339
Query: 507 FSVRLKGEAALGVWTYEGVDIVLRNALL 534
+V + + + +GV + +R +L+
Sbjct: 340 VTVH-DADKKVTAYAPKGVHVFVRRSLI 366
>gi|386759166|ref|YP_006232382.1| hypothetical protein MY9_2593 [Bacillus sp. JS]
gi|384932448|gb|AFI29126.1| hypothetical protein MY9_2593 [Bacillus sp. JS]
Length = 366
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 194/388 (50%), Gaps = 62/388 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L++Y +++DV+ L D DF + L S+V+ +VD DF+GS+
Sbjct: 34 VICQRCFRLKNYNEIQDVS----LTDDDFLNI----LHGIGETDSLVVKIVDIFDFNGSW 85
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ ++V G P ++LV K D+LP SL R W+++ A+E
Sbjct: 86 INGLQRLV----------------GGNP-ILLVGNKADILPKSLKRERLIQWMKREAKEL 128
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ K + VSA + G+K +ID + + +V+ +G N GKST +N I K V
Sbjct: 129 GL-KPVDVFLVSAGRGQGIKEVIDAIEHYRNGK-DVYVVGCTNVGKSTFINRIIKEVS-- 184
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
GEE I T + PGTTL + + L + L+DTPG+++ +Q+ + +++
Sbjct: 185 ----GEEDII----TTSQFPGTTLDAIEIP--LDDGSALYDTPGIINNHQMAHYVNKKDL 234
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP---YLP----LH 446
K+++ KELKPRT+++ +++ GL R D YV+ SP Y+P +H
Sbjct: 235 KILSPKKELKPRTFQLNDQQTLYFGGLARFD---------YVSGERSPFICYMPNELMIH 285
Query: 447 MGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGW 506
K +NA + EKH G L PP G+ ++E + V F + DI +GLGW
Sbjct: 286 RTKLKNADALYEKHAGELLTPP-GKDEMDEFPELVAHTFTIK-----DKKTDIVFSGLGW 339
Query: 507 FSVRLKGEAALGVWTYEGVDIVLRNALL 534
+V + + + +GV + +R +L+
Sbjct: 340 VTVH-DADKKVTAYAPKGVHVFVRRSLI 366
>gi|385826308|ref|YP_005862650.1| hypothetical protein [Lactobacillus johnsonii DPC 6026]
gi|417837997|ref|ZP_12484235.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus johnsonii pf01]
gi|329667752|gb|AEB93700.1| hypothetical protein LJP_1378c [Lactobacillus johnsonii DPC 6026]
gi|338761540|gb|EGP12809.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus johnsonii pf01]
Length = 369
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 203/451 (45%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++QD +PK GY PS L + +S +NE
Sbjct: 7 CIGCGSILQDQDPKKSGYL--PSSALKRALESD------------------------DNE 40
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V C RC LRHY ++ V N DF L S S +++V+ V
Sbjct: 41 ----------VYCQRCFRLRHYNEIMPVEENN--DDF------LALLNSISQKKALVVNV 82
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF S + + + GN +LV K+DL P + ++ +
Sbjct: 83 VDLFDFSNSLISSIKRFIG---------------GN--EYILVGNKVDLFPKNSKESKIK 125
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ A +G+ K K+ VSA K L L+ + G++ +++ +G N GKSTL+
Sbjct: 126 DWMRQEANRNGL-KPEKIFLVSAAKKKNLDELMAFLAK-KGEKKDIYFVGTTNVGKSTLI 183
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + + K+++ T + PGTTL +++ L L DTPG+L+ NQ
Sbjct: 184 NAIINM-------NSDLKDVI---TTSKFPGTTLDEIKIP--LSNGHYLIDTPGILNANQ 231
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + L+ +E ++V K LKP TY++ G +I +AGL R D + S T++ + L
Sbjct: 232 LASHLSGKELEVVEPKKPLKPATYQLLPGQTIFLAGLGRFDYVDGP--SAGFTIYVARDL 289
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTENA EKH L PP E + LG + F S DI G
Sbjct: 290 YVHRTKTENADAFYEKHKDDLLLPPSKE---DNLGPLKGQTFSPKEKS------DILFGG 340
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+G+ + + +T EG+ + +R AL+
Sbjct: 341 VGFITT--PANVVVKAYTPEGIGLGIRRALI 369
>gi|319651635|ref|ZP_08005762.1| GTP-binding protein [Bacillus sp. 2_A_57_CT2]
gi|317396702|gb|EFV77413.1| GTP-binding protein [Bacillus sp. 2_A_57_CT2]
Length = 368
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 207/453 (45%), Gaps = 92/453 (20%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
VC GCGV +Q NP GY P L K
Sbjct: 7 VCIGCGVKVQTENPDELGY--APHSALQK------------------------------- 33
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
+ ++C RC L+HY +V+DV+ L D DF K+++ G + ++++
Sbjct: 34 ---------ETIICQRCFRLKHYNEVQDVS----LTDDDF-----LKILNEIGQSDALIV 75
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
+VD DF+GS+ + + V + +++LV K+DLLP S+ +
Sbjct: 76 KIVDIFDFNGSWLPGLHRFVGNN-----------------KILLVGNKVDLLPKSVKTNK 118
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
+W++Q +++ G+ K +++ SA K + + I +D + +V+ +G N GKST
Sbjct: 119 LINWMKQESKQLGL-KPEEVYLASAAKGYSINE-IAAAIDHYREGKDVYVVGCTNVGKST 176
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
+N I K V G+G+ +T + PGTTL I+ + L L DTPG+++
Sbjct: 177 FINRILKEVT----GEGDV------ITTSHFPGTTLDIIEIP--LSDGKALVDTPGIINH 224
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ + + + K++ KE+KP+ Y++ ++ GL R D S S
Sbjct: 225 HQMAHYVDKRDLKVITPKKEIKPKVYQLNEAQTLFFGGLARFDYIAGGRRSF--VCHFSN 282
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L +H KTE A + H G L PP E+++E + V+ EF + DI
Sbjct: 283 ELTIHRTKTEKADELYRNHAGEMLTPP-REEQMETFPELVKHEFTIK-----EPKTDIVF 336
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +V +G A + + +GV ++R +L+
Sbjct: 337 SGLGWITVN-EGGAKVAAYVPKGVHAMIRKSLI 368
>gi|403237575|ref|ZP_10916161.1| GTPase YqeH [Bacillus sp. 10403023]
Length = 369
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 194/382 (50%), Gaps = 49/382 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGA-RSVVLMVVDAADFDGS 212
V+C RC L+HY +V+DV+ L D DF K++ G+ S+++ +VD DF+GS
Sbjct: 36 VICQRCFKLKHYNEVQDVS----LTDDDF-----LKILHGIGSTNSLIVKIVDIFDFNGS 86
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + + V D ++LV K+DLLP S+ + +W+++ +RE
Sbjct: 87 WLPGLHRFVGDNT-----------------ILLVGNKVDLLPKSVKQKKLINWMKESSRE 129
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ K + +SA K G+K + + + + +V+ +G N GKST +N + K
Sbjct: 130 LGL-KPVDVFLISAEKGTGIKEVAEAIEHYRFGK-DVYVVGCTNVGKSTFINRLIKEFS- 186
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
GE+++ + T + PGTTL I+ + L + LFDTPG+++ +Q+ +++++
Sbjct: 187 -----GEKEDFI---TTSHFPGTTLDIIDIP--LDEEHSLFDTPGIINHHQMAHFVSKQD 236
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K++ KE+KP+ +++ ++ GL R D + +S S L +H K EN
Sbjct: 237 LKVITPKKEIKPKVFQLNEQQTLFFGGLARFDFVTGNRQSF--VCHFSNLLNIHRTKLEN 294
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A + + H G L PP GE ++E + EF + + DI +GLGW ++ +
Sbjct: 295 ADELYQNHKGELLNPP-GESELDEFPPLIAHEFMIK-----EAKTDIVFSGLGWVTIN-E 347
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
+ + +GV +++R +L+
Sbjct: 348 PQTKIVAHVPKGVGVMVRKSLI 369
>gi|89100814|ref|ZP_01173666.1| GTP-binding protein [Bacillus sp. NRRL B-14911]
gi|89084460|gb|EAR63609.1| GTP-binding protein [Bacillus sp. NRRL B-14911]
Length = 367
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 208/453 (45%), Gaps = 92/453 (20%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
VC GCGV +Q NP+ GY P L K
Sbjct: 6 VCIGCGVKVQTENPEELGY--APKSALEK------------------------------- 32
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
+ +VC RC L+HY +V+DV+ L D DF K+++ G + ++++
Sbjct: 33 ---------EAIVCQRCFRLKHYNEVQDVS----LTDDDF-----LKILNEIGRSDALIV 74
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
+VD DF+GS+ + + + +V+LV K DLLP S+ +
Sbjct: 75 KIVDIFDFNGSWLPGLHRFTGNN-----------------KVLLVGNKADLLPKSVKRNK 117
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
+W++Q ++ G+ + + VSA K ++ + +D + +V+ +G N GKST
Sbjct: 118 LINWMKQESKNLGL-RPEDVFLVSAAKGQSIQE-VASAIDEYREGKDVYVVGCTNVGKST 175
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
+N I K V G+G+ +T + PGTTL I+ + L L DTPG+++
Sbjct: 176 FINRILKEVT----GEGD------IITTSHFPGTTLDIIEIP--LEDGKALVDTPGIINH 223
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ + + + K++ KE+KP+ Y++ G ++ GL R D S ++ V S
Sbjct: 224 HQMAHFVDKRDFKVIMPKKEIKPKVYQLNEGQTLFFGGLARFDFISGSRQAFICHV--SN 281
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
+ +H K ENA + EKH G L PP E +++E + VR EF V DI
Sbjct: 282 EINIHRTKLENADELYEKHAGEMLTPPRPE-QMDEFPELVRHEFTVK-----EGKTDIVI 335
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +V G + + +GV ++R +L+
Sbjct: 336 SGLGWVTVSEPG-TKVAAYVPKGVQAMVRKSLI 367
>gi|238853781|ref|ZP_04644147.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri 202-4]
gi|420147894|ref|ZP_14655168.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gasseri CECT 5714]
gi|238833590|gb|EEQ25861.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri 202-4]
gi|398400562|gb|EJN54109.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gasseri CECT 5714]
Length = 369
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 205/453 (45%), Gaps = 92/453 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++QD +PK GY P+ L K S +NE
Sbjct: 7 CIGCGSILQDQDPKKSGYL--PTSALKKALTSD------------------------DNE 40
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V C RC LRHY ++ V N DF L S S +++V+ V
Sbjct: 41 ----------VYCQRCFRLRHYNEIMPVEENN--DDF------LALLNSISQKKALVVNV 82
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF S + + + GN +LV K+DL P + ++ +
Sbjct: 83 VDLFDFSNSLISSIKRFIG---------------GN--EYILVGNKVDLFPKNSKESKIK 125
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLA--GKRGNVWAIGAQNAGKST 321
W+RQ A +G+ K K+ VSA K K+L D + LA G++ +++ +G N GKST
Sbjct: 126 DWMRQEANRNGL-KPEKIFLVSAAKK---KNLADLMAFLAKKGEKKDIYFVGTTNVGKST 181
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + + K+++ T + PGTTL +++ L L DTPG+L+
Sbjct: 182 LINAIINM-------NSDLKDVI---TTSKFPGTTLDEIKIP--LSNGHYLIDTPGILNA 229
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
NQ+ + L+ +E ++V K LKP TY++ G +I +AGL R D + T++ +
Sbjct: 230 NQLASHLSGKELEVVEPKKPLKPATYQLLPGQTIFLAGLGRFDYVDGPSSGF--TIYVAR 287
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L +H KTENA T EKH L PP + + LG + F S DI
Sbjct: 288 DLYVHRTKTENADTFYEKHKDDLLLPP---SKDDCLGPLKGQTFSPKEKS------DILF 338
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
G+G+ + + +T EG+ + +R AL+
Sbjct: 339 GGVGFITT--PANVVVKAYTPEGIGLGIRRALI 369
>gi|456011614|gb|EMF45351.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Planococcus halocryophilus Or1]
Length = 367
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 197/391 (50%), Gaps = 52/391 (13%)
Query: 145 SEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARS-VVLMV 203
S ++K E ++C RC L++Y +++ V+ L D DF ++++ G R +++ +
Sbjct: 28 SSLEKDE--IICQRCFRLKNYNELQPVS----LTDDDF-----LRILNGLGERDGLIVKI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V + ++L+ K DLLP S+ +
Sbjct: 77 VDIFDFNGSWLPGLHRFVGNN-----------------DILLIANKADLLPKSVKQHKLI 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
HW++Q AR+ G+ I L VSA + G+ ++ ++ K +V+ +G N GKST +
Sbjct: 120 HWMKQEARKLGLQPIDVLT-VSAHRGTGVPEAME-AIEKYRKGKDVYVVGCTNVGKSTFI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + K G+ I T + PGTTL ++ + L + LFDTPG+++ +Q
Sbjct: 178 NRVIKQ------ATGQSDVI----TTSHFPGTTLDMIEIP--LDDERSLFDTPGIINHHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L + K + KE+KPR +++ A ++ I GL R D + S TV + L
Sbjct: 226 LAHHLKTADLKQIMPKKEIKPRVFQLNAEQTLFIGGLARFDFIKGERSSF--TVHIANDL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K +NA + +H G L PP E + ++ + VR EF S + DI +G
Sbjct: 284 PIHRTKLDNADALYAQHLGDMLAPPSAEYK-DDFPELVRHEF-----SIKDAKTDIVFSG 337
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +++ G A + +GV+++LR +L+
Sbjct: 338 LGWITIQ-HGNAVVAAHAPKGVEVLLRPSLI 367
>gi|333397000|ref|ZP_08478813.1| GTPase YqeH [Leuconostoc gelidum KCTC 3527]
gi|406600387|ref|YP_006745733.1| GTPase YqeH [Leuconostoc gelidum JB7]
gi|406371922|gb|AFS40847.1| GTPase YqeH [Leuconostoc gelidum JB7]
Length = 382
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 198/451 (43%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +MQ + GY P L K S
Sbjct: 21 CIGCGAVMQVIDSSKAGYL--PMSALKKSINS---------------------------- 50
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ ++C RC LRHY +++ V L D DF R L S A+++++ V
Sbjct: 51 --------EELLCQRCFRLRHYNEIQPVE----LTDDDF----SRLLHQISDAKALIVYV 94
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D D GS ++A + ++N +++V K+DLLP L+ R +
Sbjct: 95 IDVFDVTGS---EIAGLPRFVGQDNP-------------ILVVANKVDLLPKLLNKNRLK 138
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+W++ + GI K + SA L L+D +D + +V+ +G N GKSTL+
Sbjct: 139 NWLQAELKAQGI-KPVDIFLTSATHPQNLDDLLD-TIDNHREGRDVYVVGVTNVGKSTLI 196
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I KS G G + I T + PGTTL R+E L +L DTPG++ +Q
Sbjct: 197 NQIIKS------GTGVQDLI----TTSRFPGTTLD--RIEIPLADGKQLIDTPGIVKRDQ 244
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
IT L ++ K E+KPRTY++ A +I I GL R D E E +T + L
Sbjct: 245 ITHVLADKDLKYALPKNEIKPRTYQLNAEQTIFIGGLARFDFELG--ERSPITAYFENNL 302
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A +KH G L P E + L +R EF+++ S DI AG
Sbjct: 303 SLHRTKLIGADDFYDKHAGELLTPSPQEATMTNL---IRHEFNITEKS------DIVFAG 353
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW S+ + W +GV +++R A++
Sbjct: 354 LGWISI--PAGIKIAGWAPQGVSVLIRKAMI 382
>gi|229019560|ref|ZP_04176376.1| hypothetical protein bcere0030_40630 [Bacillus cereus AH1273]
gi|229025801|ref|ZP_04182200.1| hypothetical protein bcere0029_40920 [Bacillus cereus AH1272]
gi|423389347|ref|ZP_17366573.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1X1-3]
gi|423417740|ref|ZP_17394829.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3X2-1]
gi|228735509|gb|EEL86105.1| hypothetical protein bcere0029_40920 [Bacillus cereus AH1272]
gi|228741726|gb|EEL91910.1| hypothetical protein bcere0030_40630 [Bacillus cereus AH1273]
gi|401106911|gb|EJQ14868.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3X2-1]
gi|401641438|gb|EJS59155.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1X1-3]
Length = 368
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 205/451 (45%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q N GY P+ +L K
Sbjct: 7 CIGCGVEIQTENKNEVGY--APASSLEK-------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L+HY +++DV+ L D DF R L + ++V+ +
Sbjct: 33 --------EQVICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGQSDALVVKI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V + +V+LV K DL+P S+ + +
Sbjct: 77 VDIFDFNGSWLPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
HW+R A++ G+ K + +SA K G+ L D ++ + +V+ +G N GKST +
Sbjct: 120 HWMRYSAKQLGL-KPEDVFLISAAKGQGITELAD-AIEYYREGKDVYVVGCTNVGKSTFI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + K E +N++ T + PGTTL ++ + L ++ LFDTPG+++ +Q
Sbjct: 178 NRMIKEFS------DETENVI---TTSHFPGTTLDLIDIP--LDEESSLFDTPGIINHHQ 226
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + ++ KL+ E+KP +++ ++ GL R D + T S L
Sbjct: 227 MAHYVGKQSLKLITPTTEIKPMVFQLNEEQTLFFGGLARFDYVSGGRRAF--TCHFSNRL 284
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A + E+H G L PP E+ +E + ++V+ EF++ D+ +G
Sbjct: 285 TIHRTKLEKADELYERHAGELLNPPTPEE-LENMPEFVKYEFNIR-----EPKTDVVFSG 338
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V G A + +GV + LR +L+
Sbjct: 339 LGWVTVNESG-AKIVAHVPKGVSVSLRKSLI 368
>gi|385813393|ref|YP_005849786.1| Ribosome biogenesis GTPase YqeH [Lactobacillus helveticus H10]
gi|323466112|gb|ADX69799.1| Ribosome biogenesis GTPase YqeH [Lactobacillus helveticus H10]
Length = 369
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 130/453 (28%), Positives = 207/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG ++Q +P+ GY P L K A+N
Sbjct: 6 ICIGCGAVLQSDDPQKAGYL--PKSALEK----------------------------AKN 35
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
E V C RC LRHY ++ V + N DF L S + +++++
Sbjct: 36 E------ENTDVYCQRCFKLRHYNEIMPVDLNN--DDF------LALLNSLAEKKALIVN 81
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF S + + V + +LV K DL P + ++
Sbjct: 82 VVDLFDFSNSLLSSLKRFVGNN-----------------DFILVGNKFDLFPKNSKQSKI 124
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+RQ A G+ + VSA K L+SLI + D + + +V+ +G N GKSTL
Sbjct: 125 KDWMRQEANRMGLYP-KDIFLVSAKKKLNLESLISYINDQSQDK-DVYFVGTTNVGKSTL 182
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + G+ +N++ T + PGTTL ++E L L DTPG++ N
Sbjct: 183 INAIIDMM-------GDIQNLI---TTSRFPGTTLD--QIEIPLENGHFLIDTPGIMTDN 230
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ T L ++ +L++ K LKP TY++ G+++ +AGL R+D + ES TV+ +
Sbjct: 231 QLATHLNAKDLELISPKKPLKPATYQLLPGNTLFLAGLGRIDYLKG--ESTSFTVYVARN 288
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEEL-GKWVRKEFHVSGSSWDSSSVDIAA 501
+ +H KT NA EKH G L PP + ++ L GK + EF D+
Sbjct: 289 MYVHRTKTTNADAFYEKHKGELLAPPSPDDQMALLKGKEFKTEF----------KSDLLF 338
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
G+G+ +V KG + +T +G+ + +R AL+
Sbjct: 339 GGIGFVTVP-KG-CLVKTYTPDGIGLGIRRALI 369
>gi|161507853|ref|YP_001577817.1| GTP-binding protein YqeH [Lactobacillus helveticus DPC 4571]
gi|160348842|gb|ABX27516.1| GTP-binding protein [Lactobacillus helveticus DPC 4571]
Length = 369
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 207/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG ++Q +P+ GY P L K A+N
Sbjct: 6 ICIGCGAVLQSDDPQKAGYL--PKSALEK----------------------------AKN 35
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
E V C RC LRHY ++ V + N DF L S + +++++
Sbjct: 36 E------ENTDVYCQRCFKLRHYNEIMPVDLNN--DDF------LALLNSLAEKKALIVN 81
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF S + + V + +LV K DL P + ++
Sbjct: 82 VVDLFDFSNSLLSSLKRFVGNN-----------------DFILVGNKFDLFPKNSKQSKI 124
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+RQ A G+ + VSA K L+SLI + D + + +V+ +G N GKSTL
Sbjct: 125 KDWMRQEANRMGLYP-KDIFLVSAKKKLNLESLISYINDQSQDK-DVYFVGTTNVGKSTL 182
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + G+ +N++ T + PGTTL ++E L L DTPG++ N
Sbjct: 183 INAIIDMM-------GDIQNLI---TTSRFPGTTLD--QIEIPLENGHFLIDTPGIMTDN 230
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ T L ++ +L++ K LKP TY++ G+++ +AGL R+D + ES T++ +
Sbjct: 231 QLATHLNAKDLELISPKKPLKPATYQLLPGNTLFLAGLGRIDYLKG--ESTSFTIYVARN 288
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEEL-GKWVRKEFHVSGSSWDSSSVDIAA 501
+ +H KT NA EKH G L PP + ++ L GK + EF D+
Sbjct: 289 MYVHRTKTTNADAFYEKHKGELLAPPSPDDQMAPLKGKEFKTEF----------KSDLLF 338
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
G+G+ +V KG + +T +G+ + +R AL+
Sbjct: 339 GGIGFVTVP-KG-CLVKTYTPDGIGLGIRRALI 369
>gi|260663501|ref|ZP_05864391.1| ribosome biogenesis GTPase YqeH [Lactobacillus fermentum 28-3-CHN]
gi|260552042|gb|EEX25095.1| ribosome biogenesis GTPase YqeH [Lactobacillus fermentum 28-3-CHN]
Length = 374
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 203/453 (44%), Gaps = 92/453 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q + GY P+ LNK GL E
Sbjct: 12 CIGCGAVIQTEDKDALGY--TPASALNK----------------------GL-------E 40
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ V+ L D DF R L A ++++ V
Sbjct: 41 TGEL-------YCQRCFRLRHYNEIAPVS----LTDDDF----LRLLSHIREANALIVYV 85
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS + + V G P V+LV K DLLP SL ++
Sbjct: 86 VDIFDFNGSIIPGLHRFV----------------GKNP-VLLVGNKEDLLPRSLRRSKLT 128
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ+A + GI + VSA KN ++ L+ + R +V+ +G N GKSTL+
Sbjct: 129 DWLRQQANQAGIRPLMTT-LVSAKKNHQVEELLATIEKYRQGR-DVYVVGVTNVGKSTLI 186
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K + + +T + PGTTL ++E L +L DTPG++H Q
Sbjct: 187 NQIIK----------QRTGVEDLITTSRFPGTTLD--KIEIPLEDGHELVDTPGIIHQEQ 234
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L E+ +LV KE+KP+TY++ +I + G+ R D + + T + L
Sbjct: 235 MAHVLPAEDLRLVAPQKEIKPKTYQLDEQQTIFLGGIARFDYLKGPRAGL--TAYFDNNL 292
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
PLH K NA EKH G L PP + +++ R EF ++ S D+ G
Sbjct: 293 PLHRTKLANADAFYEKHLGGLLVPP-HQNEIDQFPPLERFEFAITEKS------DLVFEG 345
Query: 504 LGWFSVRLKGEAALGV--WTYEGVDIVLRNALL 534
LGW +V A L V W +GV +++R A++
Sbjct: 346 LGWITV----PAGLVVAGWAPKGVGVLVRRAMI 374
>gi|184155783|ref|YP_001844123.1| GTP-binding protein YqeH [Lactobacillus fermentum IFO 3956]
gi|227515625|ref|ZP_03945674.1| GTP-binding protein [Lactobacillus fermentum ATCC 14931]
gi|385812532|ref|YP_005848923.1| GTP-binding protein [Lactobacillus fermentum CECT 5716]
gi|183227127|dbj|BAG27643.1| GTPase [Lactobacillus fermentum IFO 3956]
gi|227086055|gb|EEI21367.1| GTP-binding protein [Lactobacillus fermentum ATCC 14931]
gi|299783429|gb|ADJ41427.1| GTP-binding protein [Lactobacillus fermentum CECT 5716]
Length = 374
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 203/453 (44%), Gaps = 92/453 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q + GY P+ LNK GL E
Sbjct: 12 CIGCGAVIQTEDKDALGY--TPASALNK----------------------GL-------E 40
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ V+ L D DF R L A ++++ V
Sbjct: 41 TGEL-------YCQRCFRLRHYNEIAPVS----LTDDDF----LRLLSHIREANALIVYV 85
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS + + V G P V+LV K DLLP SL ++
Sbjct: 86 VDIFDFNGSIIPGLHRFV----------------GKNP-VLLVGNKEDLLPRSLRRSKLT 128
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ+A + GI + VSA KN ++ L+ + R +V+ +G N GKSTL+
Sbjct: 129 DWLRQQANQAGIRPLMTT-LVSAKKNHQVEELLATIEKYRQGR-DVYVVGVTNVGKSTLI 186
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K + + +T + PGTTL ++E L +L DTPG++H Q
Sbjct: 187 NQIIK----------QRTGVEDLITTSRFPGTTLD--KIEIPLDDGHELVDTPGIIHQEQ 234
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L E+ +LV KE+KP+TY++ +I + G+ R D + + T + L
Sbjct: 235 MAHVLPAEDLRLVAPQKEIKPKTYQLDEQQTIFLGGIARFDYLKGPRAGL--TAYFDNNL 292
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
PLH K NA EKH G L PP + +++ R EF ++ S D+ G
Sbjct: 293 PLHRTKLANADAFYEKHLGGLLVPP-HQNEIDQFPPLERFEFAITEKS------DLVFEG 345
Query: 504 LGWFSVRLKGEAALGV--WTYEGVDIVLRNALL 534
LGW +V A L V W +GV +++R A++
Sbjct: 346 LGWITV----PAGLVVAGWAPKGVGVLVRRAMI 374
>gi|228993078|ref|ZP_04153001.1| hypothetical protein bpmyx0001_38150 [Bacillus pseudomycoides DSM
12442]
gi|228999128|ref|ZP_04158710.1| hypothetical protein bmyco0003_36850 [Bacillus mycoides Rock3-17]
gi|229006676|ref|ZP_04164310.1| hypothetical protein bmyco0002_35780 [Bacillus mycoides Rock1-4]
gi|228754537|gb|EEM03948.1| hypothetical protein bmyco0002_35780 [Bacillus mycoides Rock1-4]
gi|228760745|gb|EEM09709.1| hypothetical protein bmyco0003_36850 [Bacillus mycoides Rock3-17]
gi|228766726|gb|EEM15366.1| hypothetical protein bpmyx0001_38150 [Bacillus pseudomycoides DSM
12442]
Length = 368
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 195/391 (49%), Gaps = 49/391 (12%)
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
TS ++K + V+C RC L++Y +++DV+ L D DF R L + ++V+ +
Sbjct: 27 TSSLEKEQ--VICQRCFRLKNYNEIQDVS----LTDDDFL----RILNGIGQSDALVVKI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V + +V+LV K DL+P S+ + +
Sbjct: 77 VDIFDFNGSWLPGLHRFVGNN-----------------KVLLVGNKSDLIPKSVKHDKVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
HW+R A++ G+ K + +SA K G++ L + + G + +V+ +G N GKST +
Sbjct: 120 HWMRYSAKQLGL-KPEDVFLISAAKGQGIRELAEAIEQYRGGK-DVYVVGCTNVGKSTFI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + K E +N++ T + PGTTL ++ + L + L+DTPG+++ +Q
Sbjct: 178 NRMIKEFSE------ETENVI---TTSHFPGTTLDLIDIP--LDETSSLYDTPGIINHHQ 226
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + ++ KL+ KE+KP +++ ++ GL R D + T S L
Sbjct: 227 MAHYVGKQSLKLITPTKEIKPMVFQLNEEQTLFFGGLARFDYISGGRRAF--TCHLSNRL 284
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + EKH G L PP E+ +E + V+ EF++ D+ +G
Sbjct: 285 PIHRTKLEKADELYEKHAGELLNPPTPEE-LENMPGLVKYEFNIR-----EPKTDVVFSG 338
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V G A + +GV + LR +L+
Sbjct: 339 LGWVTVNEPG-AKIVAHVPKGVSVSLRKSLI 368
>gi|398307026|ref|ZP_10510612.1| GTPase YqeH [Bacillus vallismortis DV1-F-3]
Length = 366
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 189/381 (49%), Gaps = 48/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L++Y +++DV+ L D DF + L S+V+ +VD DF+GS+
Sbjct: 34 VICQRCFRLKNYNEIQDVS----LTDDDFLNI----LHGIGETDSLVVKIVDIFDFNGSW 85
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ ++V G P V+LV K D+LP SL R W+++ A+E
Sbjct: 86 INGLQRLV----------------GGNP-VLLVGNKADILPKSLKRERLIQWMKREAKEL 128
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ K + VSA + G++ +ID + + +V+ +G N GKST +N I K V
Sbjct: 129 GL-KPVDVFLVSAGRGQGIREVIDAIEHYRNDK-DVYVVGCTNVGKSTFINRIIKEVS-- 184
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
GEE I T + PGTTL + + L + L+DTPG+++ +Q+ + +++
Sbjct: 185 ----GEEDII----TTSQFPGTTLDAIEIP--LDDGSALYDTPGIINHHQMAHYVNKKDL 234
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
K+++ KELKPRT+++ +++ GL R D S E + L +H K ENA
Sbjct: 235 KILSPKKELKPRTFQLNDQQTLYFGGLARFDY--VSGERAPFICYMPNELMIHRTKLENA 292
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ EKH G L PP G+ + E + V F + DI +GLGW +V
Sbjct: 293 DALYEKHAGELLTPP-GKDEMGEFPELVAHTFTIK-----DKKTDIVFSGLGWVTVH-DA 345
Query: 514 EAALGVWTYEGVDIVLRNALL 534
+ + + +GV + +R +L+
Sbjct: 346 DKKVTAYAPKGVHVFVRRSLI 366
>gi|312110147|ref|YP_003988463.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. Y4.1MC1]
gi|311215248|gb|ADP73852.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. Y4.1MC1]
Length = 367
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 204/406 (50%), Gaps = 59/406 (14%)
Query: 137 VFEAENET-------SEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRK 189
+ ++E+ET S ++K E V+C RC L+HY +V+DV L D DF +
Sbjct: 13 IIQSEDETKPGYAPKSVLEKEE--VICQRCFRLKHYNEVQDVE----LTDDDF----LKI 62
Query: 190 LMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTK 249
L S + ++V+ +VD DF+GS+ + + V++ ++LV K
Sbjct: 63 LHSIGQSEALVVKIVDIFDFNGSWLPGLHRFVANNP-----------------ILLVGNK 105
Query: 250 IDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVD-LAGKRGN 308
DLLP S+ T+ HW+ Q A + G+ K + VSAVK G+ ++ + GK N
Sbjct: 106 ADLLPKSVKYTKLIHWMAQMANDLGL-KPVDICLVSAVKGIGIAKAMEAIEKHRLGK--N 162
Query: 309 VWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPA 368
V+ +G N GKST +N I + G+G N++ T + PGTTL I+ + L
Sbjct: 163 VYVVGCTNVGKSTFINRIIQET-TGKG------NVI---TTSYFPGTTLDIIEIP--LDD 210
Query: 369 QAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEES 428
A L+DTPG+++ +Q+ + +++ K++ +E+ P+ Y++ ++ GL R+D +
Sbjct: 211 GAALYDTPGIINHHQMAHFVDKKDLKIITPKREIHPKVYQLNEQQTLFFGGLARLDYIKG 270
Query: 429 SVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVS 488
S +V +A+ LP+H K E A + K FG L PP + +++ V F +
Sbjct: 271 GRRS-FVCYFANE-LPIHRTKLEKADALYAKQFGELLSPP-SKHYIDQFPPLVAHTFTIK 327
Query: 489 GSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
DI +GLGW + G A + + +GVDI++R +L+
Sbjct: 328 -----ERKTDIVFSGLGWVTCNEPG-AQVVAYAPKGVDILIRKSLI 367
>gi|390631126|ref|ZP_10259093.1| Ribosome biogenesis GTPase YqeH [Weissella confusa LBAE C39-2]
gi|390483686|emb|CCF31441.1| Ribosome biogenesis GTPase YqeH [Weissella confusa LBAE C39-2]
Length = 380
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 183/382 (47%), Gaps = 51/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMS-ASGARSVVLMVVDAADFDGS 212
V+C RC LRHY +++ V L D DF R L++ S S+V+ V+D DF GS
Sbjct: 49 VLCQRCFRLRHYNEIQPVD----LTDDDF-----RLLLNEISATDSLVVYVMDVFDFSGS 99
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + V GN P V+LV K+D+LP SL ++ + W+RQ+A
Sbjct: 100 LIPGLHRFV----------------GNNP-VLLVGNKVDVLPKSLKRSKIKDWMRQQANI 142
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + + S + +L+D + R +V+ +G N GKSTL+N I K
Sbjct: 143 AGLRPV-DVQLTSGKSGDDVPALMDMIEKYREGR-SVYVVGVTNVGKSTLINQIIKD--- 197
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
G+ K+++ T + PGTTL R+E L + DTPG++H +Q+ LT ++
Sbjct: 198 ---ATGDNKDVI---TTSRFPGTTLD--RIEIPLDDDTFIIDTPGIIHQDQMAHYLTPKD 249
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KELKP+TY++ ++ + L R D + E +T + L +H K E
Sbjct: 250 LKYVSPQKELKPKTYQLNPQQTLFMGALARFDFIQG--EKAGITAYFENNLMIHRTKLEK 307
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A KH G L PP E ++ L R EF V + DI GLGW +V
Sbjct: 308 ADEFYSKHAGELLLPPTTEN-LDMLPPLQRHEFKV------TEKTDIVIDGLGWITV--P 358
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
+ W EGV ++ R A++
Sbjct: 359 ANTVVAGWAPEGVSVLTRRAMI 380
>gi|392989973|ref|YP_006488566.1| GTPase YqeH [Enterococcus hirae ATCC 9790]
gi|392337393|gb|AFM71675.1| GTPase YqeH [Enterococcus hirae ATCC 9790]
Length = 369
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 207/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q +P GY P L K GL E
Sbjct: 7 CIGCGATIQTDHPNELGY--TPKAALEK----------------------GL-------E 35
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
+ EV C RC LRHY +++DV+ L D DF +L++ G ++++
Sbjct: 36 SGEV-------YCQRCFRLRHYNEIQDVS----LTDDDF-----LRLLNELGQEDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + V GN P V+LV K+D+LP SL +
Sbjct: 80 VVDIFDFNGSLIPGLHRFV----------------GNNP-VLLVGNKVDILPKSLKKPKM 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+++RA E G+ + L SA K +++L+ + + R +V+ +G N GKSTL
Sbjct: 123 IQWMKERAHEAGLRPVEVL-LTSAKKANEMENLLKKIEEYREGR-DVYIVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K+ AG + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIKNT-AG---------VKDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ +++ KE+KP+ Y++ G ++ + GL R D S + S
Sbjct: 229 QMAHYLGKKDLRIIAPTKEIKPKGYQLNEGQTLFLGGLARFDFISGQRGSF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+ +H K A KH G LQPP ++ V E + VR EF V DI A
Sbjct: 287 VTIHRTKLAKADEFYVKHVGGLLQPPRPDE-VNEFPELVRFEFSV------KEKTDIVFA 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +V A + W +GV+++ R AL+
Sbjct: 340 GLGWITV--TQPAVVAGWAPKGVNVMKRKALI 369
>gi|433444333|ref|ZP_20409252.1| ribosome biogenesis GTPase YqeH [Anoxybacillus flavithermus
TNO-09.006]
gi|432001625|gb|ELK22498.1| ribosome biogenesis GTPase YqeH [Anoxybacillus flavithermus
TNO-09.006]
Length = 367
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 189/382 (49%), Gaps = 48/382 (12%)
Query: 153 PVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS 212
P++C RC L+HY +V+DV+ L D DF + L A +V+ +VD DF+GS
Sbjct: 34 PIICQRCFRLKHYNEVQDVS----LTDDDFLNI----LHGIGQADGLVVKIVDIFDFNGS 85
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + + V GK V+LV K+DLLP S+ + W++Q ARE
Sbjct: 86 WLPGLHRFV-------------GKKD----VLLVGNKVDLLPKSVKHEKVTRWMKQTARE 128
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + VSA K +G+K ++ +D +V+ +G N GKST +N I K
Sbjct: 129 LGLQP-RDVFLVSAHKGYGMKEVMT-AIDEYRNGKDVYVVGCTNVGKSTFINRIIKEA-T 185
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
G+G N++ T + PGTTL ++ + L + L+DTPG+++ +Q+ + +++
Sbjct: 186 GKG------NVI---TTSYFPGTTLDMIEIP--LDDGSALYDTPGIINHHQMAHFVDKKD 234
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K++ KE+KP+ Y++ ++ GL R+D + S L +H K E+
Sbjct: 235 LKVITPKKEIKPKVYQLNEQQTLFFGGLARLDYVSGGRRPF--VCYMSNELFIHRTKREH 292
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A + E+H G LQPP + E+L V F + DI +GLGW +
Sbjct: 293 ADELYERHLGELLQPP-RKSYCEQLPPLVAHHF-----TLKEPKTDIVFSGLGWVTCHEP 346
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
G A + + +GV ++LR +L+
Sbjct: 347 G-AQVIAYAPKGVGVMLRKSLI 367
>gi|251798007|ref|YP_003012738.1| nitric-oxide synthase [Paenibacillus sp. JDR-2]
gi|247545633|gb|ACT02652.1| Nitric-oxide synthase [Paenibacillus sp. JDR-2]
Length = 374
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 204/451 (45%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q +P+ GY P L++
Sbjct: 12 CAGCGVKLQTEHPEESGYL--PEAALSR-------------------------------- 37
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+PV+C RC +R+Y + +TV+ DF R L S S+V+ +
Sbjct: 38 --------EPVICQRCFRIRNYNEASSITVDQ--DDF------LRLLGSIGSTDSLVVHI 81
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS + + V GN P VVLVV K+DLLP S++ R
Sbjct: 82 VDLFDFEGSLISGLQRFV----------------GNNP-VVLVVNKVDLLPRSVNLNRLR 124
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+WV+++A+ +G+ + + SA +N G + +I + ++ K +V+ +GA N GKSTL+
Sbjct: 125 NWVQKQAKAEGL-RTVDIVLCSAKRNIGFEHVI-EAIERHRKDRDVYVVGATNVGKSTLI 182
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + + ++ LT + PGTTL V + L + DTPG+++P +
Sbjct: 183 NRLIH----------DYSDMERELTTSRYPGTTLDAVHIP--LDDGKSIIDTPGIVYPTR 230
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+T + R + + +K +KP Y++ S+ I L+R D E +S T + S L
Sbjct: 231 MTEIVPRGFLQALLPDKPIKPLVYQLNDQQSLFINSLVRFDFVEGERQSF--TFYISNAL 288
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A + H G L P E+ ++E+ W R + + DI +G
Sbjct: 289 HVHRTKLERAEELYADHRGELLGGPSREE-LDEMPAWTRHSIRIP----RGAKKDIFVSG 343
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GW A + ++ +G+ ++LR++L+
Sbjct: 344 MGWIQANGTSGAIVDIYAPKGIKVLLRDSLV 374
>gi|452818888|gb|EME26038.1| GTP-binding protein [Galdieria sulphuraria]
Length = 479
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/509 (25%), Positives = 220/509 (43%), Gaps = 100/509 (19%)
Query: 63 SSSLALTRDGNYDEATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVAN 122
SSS L ++ + + CPGCG L+Q T+ GY P
Sbjct: 20 SSSETLRGSFSFKKKVQHGSRCPGCGCLLQTTDKDSFGYV--PE---------------- 61
Query: 123 ESEFSNSLKKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKD------VTVENL 176
+ E++ T+ +C RC L HYGK+ + T+E L
Sbjct: 62 --------------IVESKARTA---------LCKRCFQLIHYGKLDEKLRLPAATMEEL 98
Query: 177 LPDFDFDHTVGRKLM----SASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAW 232
+ + +KL S S + ++L+V+D D GS + +++
Sbjct: 99 VEAVTGTAGIVQKLKTLFSSLSKEKFLILLVLDIFDLCGSLFSGIQNCLANAD------- 151
Query: 233 KEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGL 292
+++ V KIDLLPS + + +++ + G+ I + FVS G+
Sbjct: 152 ----------LIICVNKIDLLPS-VDCQKLVPYIKDTMQRKGLENIQSVRFVSCKTGRGI 200
Query: 293 KSLIDDVVDLA-GKRGNVWAIGAQNAGKSTLLNAIA-----------------------K 328
+SL +++ + GKR V+ +G N GKS++LN + K
Sbjct: 201 QSLRRELLHIPRGKR--VFVVGVANVGKSSILNQLKLSFRDEVKYRSRRELNHKMKKAPK 258
Query: 329 SVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRL 388
++ + D E+ +T + VPGTTL + V+ + K++DTPGL N ++ L
Sbjct: 259 TLTESQLKDIEKSAEEVPITTSVVPGTTLEVFPVK--IGKGYKIYDTPGLFLNNHLSHLL 316
Query: 389 TREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMG 448
+ EE KLV K +KP +R + G + + GL R+ E + +V V+AS + +H+
Sbjct: 317 STEELKLVIPQKSIKPICFRFQEGQHLFLGGLARIHFVEG--KPFHVVVYASSEVSIHIS 374
Query: 449 KTENACTMVEKHFGRQLQPPIGEKRVEELG-KWVRKEFHVSGSSWDSSSVDIAAAGLGWF 507
A + H + L+PP+ + + ++ +W F + G W S+ DIA AGLGW
Sbjct: 375 SCREAEQFLSSHMSQLLKPPLDKNWIHQMAIQWETNRFSIQGKGWKESAGDIAIAGLGWI 434
Query: 508 SVRLKGEAALGVWTYEGVDIVLRNALLPY 536
S G+ + G+ + LR+ LLP+
Sbjct: 435 SFVGCGKMEVDCIVPRGIRLELRDPLLPH 463
>gi|152976765|ref|YP_001376282.1| GTP-binding protein YqeH [Bacillus cytotoxicus NVH 391-98]
gi|152025517|gb|ABS23287.1| Nitric-oxide synthase [Bacillus cytotoxicus NVH 391-98]
Length = 368
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 207/451 (45%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q N GY P+ +L K
Sbjct: 7 CIGCGVEIQTENKSEVGY--APASSLQK-------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L++Y +++DV+ L D DF R L + ++V+ +
Sbjct: 33 --------EQVICQRCFRLKNYNEIQDVS----LTDDDF----LRILNGIGQSEALVVKI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V + +V+LV K DL+P S+ + +
Sbjct: 77 VDIFDFNGSWLPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKMK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
HW+R A++ G+ K + +SA K G++ L + + + +V+ +G N GKST +
Sbjct: 120 HWMRYSAKQLGL-KAEDVFLISAAKGQGIQELAEAIEKYRNGK-DVYVVGCTNVGKSTFI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + K E +N++ T + PGTTL ++ + L + L+DTPG+++ +Q
Sbjct: 178 NRMIKEFSE------ETENVI---TTSHFPGTTLDLIDIP--LDDTSSLYDTPGIINHHQ 226
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + ++ K++ KE+KP +++ ++ +GL R D S T + S L
Sbjct: 227 MAHYVGKQSLKIITPTKEIKPMVFQLNEEQTLFFSGLARFDYVSGGRRSF--TCYFSNRL 284
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A + EKH G L PP E+ +E + ++V+ EF++ D+ +G
Sbjct: 285 TIHRTKLEKADQLHEKHAGELLNPPTPEE-LESMPEFVKYEFNIR-----EPKTDVVFSG 338
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V G A + +GV + LR +L+
Sbjct: 339 LGWVTVNEPG-AKIVAHIPKGVSVSLRKSLI 368
>gi|329925908|ref|ZP_08280618.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. HGF5]
gi|328939559|gb|EGG35908.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. HGF5]
Length = 375
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 186/382 (48%), Gaps = 46/382 (12%)
Query: 153 PVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS 212
PV+C RC +++Y + V V D D + R L G ++V+ +VD DF+GS
Sbjct: 40 PVICQRCFRIKNYNEASSVAV-------DQDEFL-RLLGQIGGKNALVIHIVDLFDFEGS 91
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + V GN P V+L V K DLLP + + +WV+++ +E
Sbjct: 92 LISGLQRFV----------------GNNP-VILAVNKTDLLPKVTNWNKVLNWVQKQCKE 134
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + ++ SA KN G + L++ V G R +V+ +GA N GKS+L+N + +
Sbjct: 135 HGL-RTEEIVLCSAKKNQGFERLLETVAHYRGDR-DVYVVGATNVGKSSLINRLIR---- 188
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
+ ++ LT + PGTTL +V + L + DTPG+++P + + ++RE+
Sbjct: 189 ------DYSDLDQELTVSRYPGTTLDMVNIP--LDDGRYIIDTPGIVYPWRYSELVSRED 240
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
V LKP Y++ G ++ G R D + +S T + S L +H K E
Sbjct: 241 LGTVMPENPLKPMVYQLNEGQTLFFGGFARFDFLQGEHQSF--TCFISGRLGIHRTKLER 298
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A ++ +H G L PP E R+EEL +W R E + + D+ +G+GW + +
Sbjct: 299 ADSLFAEHAGELLSPPTKE-RLEELPEWTRHEIRIP----KGARQDVFISGIGWIKINGE 353
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
A + V +G+ ++ R +L+
Sbjct: 354 HGALVAVHVPKGIKVLSRPSLI 375
>gi|404328442|ref|ZP_10968890.1| GTPase YqeH [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 366
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 202/387 (52%), Gaps = 53/387 (13%)
Query: 149 KHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLMVVDAA 207
+H+ PV+C RC L+HY +V+DV + DF KL+S SG + +V+ +VD
Sbjct: 30 RHD-PVICRRCFRLQHYNEVQDVPMTG--DDF-------LKLLSQISGRKGLVVYLVDIF 79
Query: 208 DFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVR 267
DF GS+ + + V GN P V++V K+DLLP S +P + W+R
Sbjct: 80 DFSGSWVPGLQRFV----------------GNNP-VLMVGNKLDLLPKSTNPNKLTSWLR 122
Query: 268 QRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIA 327
+ A+E G+ + L +SA KN G+ +I+++ D K +++ +G N GKST +N +
Sbjct: 123 RSAKELGLRPLDVL-LMSAEKNMGIDQVIEEMNDYR-KGKDIYVVGVTNVGKSTFINHLI 180
Query: 328 KSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR 387
++V G+++ + T + PGTTL + + L L+DTPG+++ +Q
Sbjct: 181 RAV-------GQQEGTI---TTSHFPGTTLDFIGIP--LDDGQMLYDTPGIVNLHQAAHF 228
Query: 388 LTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHM 447
++ ++ + V +E+KP +++ G ++ + G+ R+D S+ V+ S L +H
Sbjct: 229 ISEKDYRQVMPTREIKPVVFQLNEGQTLFLGGMGRIDYIGPGRRSL--IVYTSNRLTVHR 286
Query: 448 GKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWF 507
+T++A + + +G+ L PP + + EL + +F D + DI +GLGW
Sbjct: 287 TRTDHADDLFHRQYGQLLSPPSRTRGLPELKSY---DFRT-----DGLNTDIVFSGLGWV 338
Query: 508 SVRLKGEAALGVWTYEGVDIVLRNALL 534
+V+ +G A + V+ E + + R +++
Sbjct: 339 TVKGRG-AQIHVFAPESISVSRRTSII 364
>gi|373859118|ref|ZP_09601850.1| ribosome biogenesis GTPase YqeH [Bacillus sp. 1NLA3E]
gi|372451209|gb|EHP24688.1| ribosome biogenesis GTPase YqeH [Bacillus sp. 1NLA3E]
Length = 367
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 200/453 (44%), Gaps = 92/453 (20%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
VC GCGV +Q P G+ P L K
Sbjct: 6 VCIGCGVKIQTEQPDELGF--APKSALEK------------------------------- 32
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVL 201
+ ++C RC L++Y +V+DV L D DF K+++ G + ++++
Sbjct: 33 ---------ETIICQRCFRLKNYNEVQDVH----LTDDDF-----LKILNEIGTKDALIV 74
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
+VD DF+GS+ + + V + +++L+ K+DLLP S+ P +
Sbjct: 75 KIVDIFDFNGSWLPGLHRFVGNN-----------------KILLIGNKVDLLPKSVKPAK 117
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
HW++ A+E G+ K + VSA + ++ + ++ +V+ +G N GKST
Sbjct: 118 LIHWMKHEAKEQGL-KPEDVFLVSAARGQFIQEAVA-AIEKHRDGKDVYVVGCTNVGKST 175
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
+N + K G E+ SH PGTTL I+ + L L DTPG+++
Sbjct: 176 FINRVIKEFSGG-----EDVITTSHF-----PGTTLDIIEIP--LSDGKALIDTPGIINH 223
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ + + + K + KE+KP+ Y++ G ++ GL R D S + S
Sbjct: 224 HQMAHFIDKRDLKFITPKKEIKPKIYQVNEGQTLFFGGLARFDYLSGGRRSF--VCYISN 281
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L +H K E A + + H G L PP E ++E + VR EF + D+
Sbjct: 282 ELGIHRTKIEKADELYQNHVGEMLTPPRKEG-LDEFPELVRHEFMIK-----EGKTDVVF 335
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW ++ G A + + +GV +++R +L+
Sbjct: 336 SGLGWVTINDPG-AKVAAYVPKGVQVMIRKSLI 367
>gi|403514618|ref|YP_006655438.1| GTPase YqeH [Lactobacillus helveticus R0052]
gi|403080056|gb|AFR21634.1| GTPase YqeH [Lactobacillus helveticus R0052]
Length = 369
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 204/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG ++Q +P+ GY P L K A+N
Sbjct: 6 ICIGCGAVLQSDDPQKAGYL--PKSALEK----------------------------AKN 35
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
E V C RC LRHY ++ V + N DF L S + +++++
Sbjct: 36 E------ENTDVYCQRCFKLRHYNEIMPVDLNN--DDF------LALLNSLAEKKALIVN 81
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF S + + V + +LV K DL P + ++
Sbjct: 82 VVDLFDFSNSLLSSLKRFVGNN-----------------DFILVGNKFDLFPKNSKQSKI 124
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+RQ A G+ + VSA K L+SLI + D + + +V+ +G N GKSTL
Sbjct: 125 KDWMRQEANRMGLYP-KDIFLVSAKKKLNLESLISYINDQSQDK-DVYFVGTTNVGKSTL 182
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + NI + +T + PGTTL ++E L L DTPG++ N
Sbjct: 183 INAIIDMM----------GNIQNLITTSRFPGTTLD--QIEIPLENGHFLIDTPGIMTDN 230
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ T L ++ +L++ K LKP TY++ G+++ + GL R+D + ES TV+ +
Sbjct: 231 QLATHLNAKDLELISPKKPLKPATYQLLPGNTLFLVGLGRIDYLKG--ESTSFTVYVARN 288
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEEL-GKWVRKEFHVSGSSWDSSSVDIAA 501
+ +H KT NA EKH G L PP + ++ L GK + EF D+
Sbjct: 289 MYVHRTKTTNADAFYEKHKGELLTPPSPDDQMAPLKGKEFKTEF----------KSDLLF 338
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
G+G+ +V KG + +T +G+ + +R AL+
Sbjct: 339 GGIGFVTVP-KG-CLVKTYTPDGIGLGIRRALI 369
>gi|422415992|ref|ZP_16492949.1| ribosome biogenesis GTPase YqeH [Listeria innocua FSL J1-023]
gi|313623708|gb|EFR93856.1| ribosome biogenesis GTPase YqeH [Listeria innocua FSL J1-023]
Length = 366
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 204/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY P +LN NE
Sbjct: 7 CIGCGAIIQTEDPDKIGY--APKSSLN-----------NEQ------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L+HY +++DV L D DF R L S +++++ V
Sbjct: 35 ----------VICKRCFRLKHYNEIQDVA----LTDDDF----LRILNQISSKQALIVYV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS+ + + +G+ P V+LV K D+LP SL +
Sbjct: 77 VDIFDFDGSWLPGLPRF----------------AGSNP-VLLVGNKEDVLPKSLKRDKLT 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
RA+E G++ T + VSA K G +L++ + +L + +V+ +G N GKSTL+
Sbjct: 120 RXXXTRAKEQGLAA-TDVVLVSAEKGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K E N++ T + PGTTL ++E L L DTPG+++ +Q
Sbjct: 178 NRIIKQASG-------ENNVI---TTSQFPGTTLD--KIEIPLADGNVLVDTPGIINHHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + K + KE+KP +++ ++ + L R+D +S+ V+ S L
Sbjct: 226 MAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + EK G LQPP E+ ++ L K V F V + DI +G
Sbjct: 284 PIHRTKLEKADALYEKQAGFVLQPPT-EEGMKTLPKLVPYTFTVKDKA------DIVFSG 336
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW ++ +G A + W EGV +R +L+
Sbjct: 337 LGWVTIP-EGGAKVTAWVPEGVSATIRTSLV 366
>gi|313884889|ref|ZP_07818641.1| ribosome biogenesis GTPase YqeH [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619580|gb|EFR31017.1| ribosome biogenesis GTPase YqeH [Eremococcus coleocola
ACS-139-V-Col8]
Length = 375
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/453 (28%), Positives = 199/453 (43%), Gaps = 93/453 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q +P+ PGY +S + L KG
Sbjct: 14 CIGCGAYIQTDHPELPGY-------------------TPQSAYEKGLTKG---------- 44
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVK--DVTVENLLPDFDFDHTVGRKLMSASGARSVVL 201
C RC LRHY +++ DV+ L D +G+ + V
Sbjct: 45 ---------EFYCQRCFRLRHYNEIQNFDVSEYFFLEQLD---KIGQD------EEAFVF 86
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
+VD D +GS + + +GN P +LV KIDLLP S+ R
Sbjct: 87 HLVDIFDLEGSLLTGLNRF----------------TGNKP-FILVANKIDLLPKSVKLGR 129
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
+ W+ QR + + +SA K L LI+ + D + N++ +G N GKS+
Sbjct: 130 IQSWLTQRFHALDLYP-QDVILLSAKKGASLDQLIEVIQDKI-QNHNIYTVGVTNVGKSS 187
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
++N + K + GE N++ T + +PGTTL + + L L DTPG++
Sbjct: 188 VINHVLKDL-------GEADNLI---TTSAMPGTTLEFIELP--LTEDHALIDTPGIIRS 235
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
QIT L RE K+V +K +KPR++++ +G +I AGL R+D E S T + S
Sbjct: 236 QQITHYLDREGIKVVLPDKMIKPRSFQLDSGQTIFFAGLGRLDFERGDKTSF--TFYVSN 293
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L LH KTE A ++ H G+ L PP + ++ K +H+ ++ D+A
Sbjct: 294 NLLLHRTKTEKADQLLADHQGQLLSPPQAKDQLPAF-----KTYHIQL----QANQDLAI 344
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
AGLGW +V +L + +GV +R A++
Sbjct: 345 AGLGWVTV--NQAVSLSLQLPQGVTYAVRPAMI 375
>gi|157931839|gb|ABW04999.1| GTP-binding protein [Lactobacillus reuteri]
Length = 375
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/442 (28%), Positives = 194/442 (43%), Gaps = 88/442 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY + ++L++G E
Sbjct: 13 CIGCGSIIQTEDPNGLGYTPK-----------------------SALERG--------KE 41
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ C RC LRHY ++ V+ L D DF R L A ++++ V
Sbjct: 42 TGEL-------YCQRCFRLRHYNEIAPVS----LTDDDF----LRLLNQIRDANALIVYV 86
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS + + V D V+LV K DLLP SL +
Sbjct: 87 VDVFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKEDLLPRSLRRPKLT 129
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ+A G+ I + VSA KN + L+D V++ +V+ +G N GKSTL+
Sbjct: 130 DWIRQQANIAGLRPIDTV-LVSAKKNHQIDHLLD-VIEKYRHNRDVYVVGVTNVGKSTLI 187
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K + + +T + PGTTL ++E L L DTPG++H Q
Sbjct: 188 NQIIK----------QRTGVKELITTSRFPGTTLD--KIEIPLDDGHVLVDTPGIIHQEQ 235
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ ++ K+V KE+KP+TY++ G ++ + G+ R D E + + L
Sbjct: 236 MAHVLSPKDLKIVAPQKEIKPKTYQLNDGQTLFLGGVARFDYLHG--ERAGMVAYFDNNL 293
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K NA KH G L PP +++ + R EFH++ S DI G
Sbjct: 294 PIHRTKLSNADNFYAKHLGDLLTPPTSDEK-DGFPPLERYEFHITEKS------DIVFEG 346
Query: 504 LGWFSVRLKGEAALGVWTYEGV 525
+GW + K G W +GV
Sbjct: 347 VGWITGPAKTTG--GAWVPKGV 366
>gi|339448445|ref|ZP_08652001.1| GTPase YqeH [Lactobacillus fructivorans KCTC 3543]
Length = 372
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 142/465 (30%), Positives = 210/465 (45%), Gaps = 97/465 (20%)
Query: 73 NYDEATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKK 132
N DE+ L C GCG +QDT+P GY
Sbjct: 2 NNDESKEPL-YCIGCGAEIQDTDPDAVGY------------------------------- 29
Query: 133 GGLVVFEAENETSEVKK--HEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKL 190
TS +KK + C RC LRHY +++ V N D + KL
Sbjct: 30 ---------TPTSAIKKGIDSGKLYCQRCFKLRHYNQIEPSRVSN-------DEFL--KL 71
Query: 191 MSA-SGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTK 249
+S S S+V+ VVD D DGS + + V G P ++LV K
Sbjct: 72 LSKISETNSLVVYVVDVFDVDGSMIPGIQRFV----------------GKNP-IILVGNK 114
Query: 250 IDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNV 309
DLLPSS + + + W+RQ A ++GI I + VSA N + L+ + + R NV
Sbjct: 115 SDLLPSSFNHNKVKDWLRQMANKNGIRPI-DIELVSAKTNQSVDDLLKAISNHQKGR-NV 172
Query: 310 WAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQ 369
+ +G N GKSTL+N I + EK ++ T + PGTTL ++++ L
Sbjct: 173 YVVGVTNVGKSTLINQIIQQSTG-------EKQVI---TTSKFPGTTLDLIKIP--LEDG 220
Query: 370 AKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESS 429
+L DTPG++H Q+ L ++ K V+ K +KP+TY++ G ++ + + R D S
Sbjct: 221 RELIDTPGVIHEGQMAHYLGSKDLKYVSPQKRIKPKTYQLDPGQTLFLGAIGRFDF--IS 278
Query: 430 VESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSG 489
E TV+A L +H K ENA +KH G L PP G+ V EL ++ EF V+
Sbjct: 279 GERHGFTVYADNNLMIHRTKLENADEFFDKHAGELLTPPTGKDNVIELQRY---EFKVTD 335
Query: 490 SSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
S D+ GLGW +V KG G + +GV +++R A+
Sbjct: 336 RS------DLVIEGLGWITVP-KGSTVAG-YAPKGVSVLIRKAMF 372
>gi|229175010|ref|ZP_04302529.1| hypothetical protein bcere0006_40930 [Bacillus cereus MM3]
gi|423457416|ref|ZP_17434213.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5X2-1]
gi|228608471|gb|EEK65774.1| hypothetical protein bcere0006_40930 [Bacillus cereus MM3]
gi|401147800|gb|EJQ55293.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5X2-1]
Length = 368
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 195/391 (49%), Gaps = 49/391 (12%)
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
TS ++K + V+C RC L+HY +++DV+ L D DF R L + ++V+ +
Sbjct: 27 TSSLEKEQ--VICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGKSDALVVKI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V + +V+LV K DL+P S+ + +
Sbjct: 77 VDIFDFNGSWLPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
HW+R A++ G+ K + +SA K G+ L D + G + +V+ +G N GKST +
Sbjct: 120 HWMRYSAKQLGL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + K E +N++ T + PGTTL ++ + L ++ L+DTPG+++ +Q
Sbjct: 178 NRMIKEFS------DETENVI---TTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQ 226
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + +E KL+ KE+KP +++ ++ +GL R D + T S L
Sbjct: 227 MAHYVGKESLKLITPTKEIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRL 284
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A + + H G L PP E+ +E + + V+ EF++ D+ +G
Sbjct: 285 TIHRTKLEKADELYKNHAGDLLSPPTPEE-LENMPELVKYEFNIR-----EPKTDVVFSG 338
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V G A + +GV + LR +L+
Sbjct: 339 LGWVTVNESG-AKIVAHVPKGVSVSLRKSLI 368
>gi|295693368|ref|YP_003601978.1| GTP-binding protein [Lactobacillus crispatus ST1]
gi|295031474|emb|CBL50953.1| GTP-binding protein [Lactobacillus crispatus ST1]
Length = 369
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 203/453 (44%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG ++Q +PK GY P L+K + +E
Sbjct: 6 ICIGCGAVLQSDDPKKAGYL--PKSALDKAK--------------------------SEE 37
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
T V C RC LRHY ++ V + N DF L S S +++V+
Sbjct: 38 NTD--------VYCQRCFRLRHYNEIMPVDLNN--DDF------LALLNSLSEKKALVVN 81
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF S + + V + +LV K DL P + ++
Sbjct: 82 VVDLFDFSNSLLSSLKRFVGNN-----------------DFILVGNKFDLFPKNSRQSKI 124
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+RQ A G+ ++ VSA + L+SLI ++ + +V+ +G N GKSTL
Sbjct: 125 KDWMRQEANRMGLYP-KEIFLVSAKRKVNLESLIA-YINKQSQDKDVYFVGTTNVGKSTL 182
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + GD I +T + PGTTL R+E L L DTPG++ N
Sbjct: 183 INAIIDMM-----GD-----IQDLITTSRFPGTTLD--RIEIPLENGHFLIDTPGIMTDN 230
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ T L + +L++ K LKP TY++ G+++ +AGL R+D + ES TV+ +
Sbjct: 231 QLATHLNAKNLELISPKKPLKPATYQLMPGNTLFLAGLGRIDYLKG--ESTSFTVYVARG 288
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEEL-GKWVRKEFHVSGSSWDSSSVDIAA 501
+ +H KT NA EKH G L PP + ++ L G+ R E+ D+
Sbjct: 289 MYVHRTKTANADAFYEKHVGELLAPPAKDDKLPALKGQEYRTEY----------KSDLLF 338
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
G+G+ +V + +T +G+ + +R AL+
Sbjct: 339 GGIGFVTV--PEGCVVKTYTPDGIGLGIRRALI 369
>gi|169829302|ref|YP_001699460.1| GTP-binding protein YqeH [Lysinibacillus sphaericus C3-41]
gi|168993790|gb|ACA41330.1| Hypothetical yqeH protein [Lysinibacillus sphaericus C3-41]
Length = 367
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 188/381 (49%), Gaps = 48/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L++Y +++ V+ L D DF R L + +++ +VD DF+GS+
Sbjct: 35 VICQRCFRLKNYNEIQPVS----LTDDDF----LRILNGLGTQQGLIVKIVDIFDFNGSW 86
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V G P V+L+ K DLLP S+ P + +W+++ A+
Sbjct: 87 LPGLHRFV----------------GKNP-VLLIANKADLLPKSVKPKKVINWLKREAKAL 129
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ + L VSA K G+ ++ +D + NV+ +G N GKST +N I K
Sbjct: 130 GLQPVDVL-LVSAHKGKGMAEAME-AIDEYRQGQNVYVVGCTNVGKSTFINRIIKQAT-- 185
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
G+GE +T + PGTTL ++ + L + LFDTPG+++ +Q+ + E
Sbjct: 186 --GEGEV------ITTSHFPGTTLDMIEIP--LDDGSALFDTPGIINHHQMAHHIDSSEL 235
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
K + KE+KP+ Y+ AG ++ I L R D + + T+ + LP+H K E A
Sbjct: 236 KYIMPKKEIKPKVYQQNAGQTLFIGALARFDFIQGDRSAF--TIHVANDLPIHRTKLEKA 293
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
T+ +H G L PP E +++L VR EF S + D+ +GLGW +V+
Sbjct: 294 DTLYTEHKGDLLAPPTAE-FIDQLPPLVRHEF-----SIKEAKTDVVFSGLGWITVQ-HA 346
Query: 514 EAALGVWTYEGVDIVLRNALL 534
+ + +GV + +R +L+
Sbjct: 347 NVVVAAYAPKGVQVSIRPSLI 367
>gi|227892823|ref|ZP_04010628.1| GTP-binding protein [Lactobacillus ultunensis DSM 16047]
gi|227865325|gb|EEJ72746.1| GTP-binding protein [Lactobacillus ultunensis DSM 16047]
Length = 369
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 206/452 (45%), Gaps = 88/452 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q +PK GY P L K A+N
Sbjct: 6 ICIGCGATLQSDDPKKAGYL--PKSALEK----------------------------AKN 35
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
E V C RC LRHY ++ V + N DF L S S +++V+
Sbjct: 36 E------ENTDVYCQRCFRLRHYNEIMPVDLNN--DDF------LALLNSLSEKKALVVN 81
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF S + + V GK+ +LV K DL P + ++
Sbjct: 82 VVDLFDFSNSLLSSLKRFV-------------GKND----FILVGNKFDLFPKNSKQSKI 124
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+RQ+A G+ ++ VSA K L+ LI ++ + +V+ +G N GKSTL
Sbjct: 125 KDWMRQKANRMGLFP-KEIFLVSAKKKLNLEKLIA-YINKQSQDKDVYFVGTTNVGKSTL 182
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + GD I +T + PGTTL ++E L + L DTPG++ N
Sbjct: 183 INAIIDMM-----GD-----IQDLITTSRFPGTTLD--QIEIPLDSGHFLIDTPGIMTDN 230
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ T L ++ +L++ K LKP TY++ G+++ +AGL R+D + ES TV+ +
Sbjct: 231 QLATHLNAKDLELISPKKPLKPATYQLLPGNTLFLAGLGRIDYLKG--ESTSFTVYVARG 288
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+ +H KT NA EKH G L PP + +E+ +EF S D+
Sbjct: 289 MYVHRTKTTNADAFYEKHKGELLAPPAKD---DEMASLKGQEFKTEYKS------DLLFG 339
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
G+G+ +V KG + +T +G+ + +R AL+
Sbjct: 340 GIGFVTVP-KG-CVVKTYTPDGIGLGIRRALI 369
>gi|229117833|ref|ZP_04247197.1| hypothetical protein bcere0017_41040 [Bacillus cereus Rock1-3]
gi|423377807|ref|ZP_17355091.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1O-2]
gi|423547638|ref|ZP_17523996.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB5-5]
gi|423622577|ref|ZP_17598355.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD148]
gi|228665630|gb|EEL21108.1| hypothetical protein bcere0017_41040 [Bacillus cereus Rock1-3]
gi|401179359|gb|EJQ86532.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB5-5]
gi|401260697|gb|EJR66865.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD148]
gi|401636073|gb|EJS53827.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1O-2]
Length = 368
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 205/451 (45%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q N GY P+ +L K
Sbjct: 7 CIGCGVEIQTENKNEVGY--APASSLEK-------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L+HY +++DV+ L D DF R L + ++V+ +
Sbjct: 33 --------EQVICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGRSDALVVKI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V + +V+LV K+DL+P S+ + +
Sbjct: 77 VDIFDFNGSWLPGLHRFVGNN-----------------KVLLVGNKVDLIPKSVKHDKVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
HW+R A++ G+ K + +SA K G+ L D ++ +V+ +G N GKST +
Sbjct: 120 HWMRYSAKQLGL-KPEDVFLISAAKGQGIAELAD-AIEYYRDGKDVYVVGCTNVGKSTFI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + K E +N++ T + PGTTL ++ + L ++ L+DTPG+++ +Q
Sbjct: 178 NRMIKEFS------DETENVI---TTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQ 226
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + +E KL+ KE+KP +++ ++ +GL R D + T S L
Sbjct: 227 MAHYVGKESLKLITPTKEIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRL 284
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A + + H G L PP E+ +E + + V+ EF++ D+ +G
Sbjct: 285 TIHRTKLEKADELYKNHAGDLLSPPTPEE-LENMPELVKYEFNIR-----EPKTDVVFSG 338
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V G A + +GV + LR +L+
Sbjct: 339 LGWVTVNESG-AKIVAHVPKGVSVSLRKSLI 368
>gi|335429482|ref|ZP_08556380.1| GTPase YqeH [Haloplasma contractile SSD-17B]
gi|334889492|gb|EGM27777.1| GTPase YqeH [Haloplasma contractile SSD-17B]
Length = 369
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 203/451 (45%), Gaps = 87/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGVL+Q + PG+
Sbjct: 6 CIGCGVLIQTEHKDKPGF----------------------------------------TP 25
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
S ++K + + C RC L+HY V+DV + N DF + L S ++++ V
Sbjct: 26 KSSLEKKDNDIFCKRCFRLKHYNDVQDVGLSN--DDF------LKILNEVSKEDALIVKV 77
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D AD GS + +++ D +++V K DLLP ++ +
Sbjct: 78 IDLADLTGSILTGINRLIGDND-----------------LLIVGNKRDLLPKPINDNKII 120
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+W++Q +E G+ + + VSA K G++ L++ ++ + NV+ +G+ N GKSTL+
Sbjct: 121 NWMKQSLKEYGMKPVDYV-LVSANKGIGVEELLN-TIETHRRNRNVYVVGSTNVGKSTLI 178
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI K EEK+ ++T + PGTTLGI+ + L + + DTPG+++ +Q
Sbjct: 179 NAIIKRFTE------EEKD---YITTSYFPGTTLGIIEIP--LTDEHNIIDTPGIINKHQ 227
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
L ++ + E+KP+ Y++ ++ GL R D E+ S +V +A+ +
Sbjct: 228 YAHYLDQKSLTHITPKNEIKPKVYQLNNEQTLFFDGLARFDFEDGPRSS-FVCYFANQ-V 285
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A + E H G+ L PP E+ + LG + R+ F S D+ +G
Sbjct: 286 NIHRTKLEKADQLFENHLGKMLTPPTTEE-YKRLGGYRRQHFKTP-----SYKCDLVISG 339
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GW ++ + + + + V + +R +L+
Sbjct: 340 YGWITID-QPNIKIAIHAPKNVGVFIRRSLI 369
>gi|241894958|ref|ZP_04782254.1| GTP-binding protein [Weissella paramesenteroides ATCC 33313]
gi|241871676|gb|EER75427.1| GTP-binding protein [Weissella paramesenteroides ATCC 33313]
Length = 380
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 192/451 (42%), Gaps = 87/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+Q N GY + S LK FE +
Sbjct: 17 CIGCGALIQTDNKDEIGY----------------------TPMSALLKS-----FENDE- 48
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V C RC LRHY +++ V L D DF R L + S+V+ V
Sbjct: 49 ----------VFCQRCFRLRHYNEIQPVN----LTDDDF----RRLLEQIADTDSLVVYV 90
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF GS + + V + V+LV K+D+LP SL T+ +
Sbjct: 91 MDVFDFSGSLIPGLHRFVGNND-----------------VLLVGNKVDVLPRSLKRTKIK 133
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ+A G+ I + S + +L+D + R +V+ +G N GKSTL+
Sbjct: 134 DWMRQQANIAGLRPI-DIALTSGKNGDAIANLLDLIAKYRKGR-SVYVVGVTNVGKSTLI 191
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K V R +T + PGTTL R+E L + + DTPG++H +Q
Sbjct: 192 NQIIKEVTGDR---------TDVITTSRFPGTTLD--RIEIPLDDDSNIIDTPGIIHQDQ 240
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L ++ K V+ KE+KP+T+++ A ++ + L R D + I T + L
Sbjct: 241 MAHYLGVKDLKYVSPQKEIKPKTFQLNAEQTLFMGALARFDYIQGDRTGI--TAYFENNL 298
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K NA KH G L PP E +++L R EF + DI G
Sbjct: 299 LIHRTKLANADAFYNKHAGELLAPPTTEN-LDKLPPLQRHEFKT------TEKTDIVIDG 351
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V + W +GV ++ R A++
Sbjct: 352 LGWLTV--PANTVVAGWAPKGVSVLTRRAMI 380
>gi|424739106|ref|ZP_18167528.1| GTP-binding protein YqeH [Lysinibacillus fusiformis ZB2]
gi|422946971|gb|EKU41373.1| GTP-binding protein YqeH [Lysinibacillus fusiformis ZB2]
Length = 367
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 188/381 (49%), Gaps = 48/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L++Y +++ V+ L D DF R L + +++ +VD DF+GS+
Sbjct: 35 VICQRCFRLKNYNEIQPVS----LTDDDF----LRILNGLGTQQGLIVKIVDIFDFNGSW 86
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V G P V+L+ K DLLP S+ P + +W+++ A+
Sbjct: 87 LPGLHRFV----------------GKNP-VLLIANKADLLPKSVKPKKVINWLKREAKAL 129
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ + L VSA K G+ ++ +D K NV+ +G N GKST +N I K
Sbjct: 130 GLQPVDVL-LVSAHKGKGMAEAME-AIDAYRKGQNVYVVGCTNVGKSTFINRIIKQAT-- 185
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
G+GE +T + PGTTL ++ + L + L+DTPG+++ +Q+ + E
Sbjct: 186 --GEGEV------ITTSHFPGTTLDMIDIP--LDDGSALYDTPGIINHHQMAHHIDSSEL 235
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
K + KE+KP+ Y+ AG ++ I L R D + + T+ + LP+H K E A
Sbjct: 236 KYIMPKKEIKPKVYQQNAGQTLFIGALARFDFIQGDRSAF--TIHVANDLPIHRTKLEKA 293
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ E+H G L PP + +++L VR EF S + D+ +GLGW +V+
Sbjct: 294 DALYEEHKGELLAPPTAD-FIDQLPPLVRHEF-----SIKEAKTDVVFSGLGWITVQ-HA 346
Query: 514 EAALGVWTYEGVDIVLRNALL 534
+ + +GV + +R +L+
Sbjct: 347 NVVVAAYAPKGVQVSIRPSLI 367
>gi|229086906|ref|ZP_04219065.1| hypothetical protein bcere0022_34800 [Bacillus cereus Rock3-44]
gi|228696416|gb|EEL49242.1| hypothetical protein bcere0022_34800 [Bacillus cereus Rock3-44]
Length = 368
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 189/381 (49%), Gaps = 47/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L++Y +++DV+ L D DF R L + ++V+ +VD DF+GS+
Sbjct: 35 VICQRCFRLKNYNEIQDVS----LTDDDFL----RILNGIGQSDALVVKIVDIFDFNGSW 86
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V + +V+LV K DL+P S+ + +HW+R A++
Sbjct: 87 LPGLHRFVGNN-----------------KVLLVGNKSDLIPKSVKHDKVKHWMRYSAKQL 129
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ K + +SA K G++ L + + + +V+ +G N GKST +N + K
Sbjct: 130 GL-KPEGIFLISAAKGQGIRELAEAIEQYRDGK-DVYVVGCTNVGKSTFINRMIKEFSE- 186
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
E +N++ T + PGTTL ++ + L ++ L+DTPG+++ +Q+ + ++
Sbjct: 187 -----ETENVI---TTSHFPGTTLDLIDIP--LDEKSSLYDTPGIINHHQMAHYVGKQSL 236
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
KL+ KE+KP +++ ++ GL R D + T S LP+H K E A
Sbjct: 237 KLITPTKEIKPMVFQLNEEQTLFFGGLARFDYISGGRRAF--TCHFSNRLPIHRTKLEKA 294
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ EKH G L PP E+ +E + V+ EF++ D+ +GLGW +V G
Sbjct: 295 DELYEKHAGELLNPPTPEE-IENMPGLVKYEFNIR-----EPKTDVVFSGLGWVTVNESG 348
Query: 514 EAALGVWTYEGVDIVLRNALL 534
A + +GV + LR +L+
Sbjct: 349 -AKIVAHVPKGVSVSLRKSLI 368
>gi|66812700|ref|XP_640529.1| hypothetical protein DDB_G0281603 [Dictyostelium discoideum AX4]
gi|60468560|gb|EAL66563.1| hypothetical protein DDB_G0281603 [Dictyostelium discoideum AX4]
Length = 650
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 202/427 (47%), Gaps = 81/427 (18%)
Query: 80 KLTVCPGCGVLMQDTNPKHPGYF-----IRPSQNLN-----KVRKSHLVHVANES--EFS 127
KL C GCG +Q +PK PGY I+ + LN K+ S + ++S E+
Sbjct: 122 KLPRCTGCGSTLQTKSPKEPGYLPESIAIKHIEQLNEEKIEKIENSKPIEEQDKSGEEYF 181
Query: 128 NSLKKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVG 187
NS KK+ + VC RCH L++YG+V V + P F +
Sbjct: 182 NSF-------------YIIKKKNNEKKVCQRCHILKNYGRVAPVAI----PIEKFKDNLS 224
Query: 188 RKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVV 247
+ +V+ VVD DF+G+F +++ G P V++V
Sbjct: 225 Q----LKDLNCLVVKVVDLMDFNGTFIEDFREII----------------GRNP-VIVVG 263
Query: 248 TKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG 307
K+DLLP + R E W+R A++ G++ I+ + +S+ G+K I ++ L R
Sbjct: 264 NKMDLLPDDIHKDRIEQWIRTEAKKRGLNHISHVKLISSASGDGMKQFIIELEKLRKSR- 322
Query: 308 NVWAIGAQNAGKSTLLNAIAK-----------------------SVDAGRGGDGEE--KN 342
+V+ +G N GKST +N + K ++ + D E+ K+
Sbjct: 323 DVFIVGCSNVGKSTFVNTLIKEYNNRVEFTTNEKLESKKQSEPLTIQEQKDLDREKLLKS 382
Query: 343 IVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKEL 402
+ S +T + +PGTTL ++ + L + LFDTPG+ +P Q+ LT +E K V +K +
Sbjct: 383 LQSKITTSVLPGTTLNLLSLP--LWDNSTLFDTPGIDNPRQMIKNLTIDELKQVIPSKRI 440
Query: 403 KPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFG 462
KP+ + G S+ I GL+R+D + S ++ ++ S +PLH+ T+ A ++++H G
Sbjct: 441 KPQLAHMIEGKSLFIGGLVRIDYDGPL--STFM-IYTSNSIPLHITSTQKANFILKRHQG 497
Query: 463 RQLQPPI 469
L PPI
Sbjct: 498 SFLTPPI 504
>gi|299535723|ref|ZP_07049044.1| GTP-binding protein YqeH [Lysinibacillus fusiformis ZC1]
gi|298728923|gb|EFI69477.1| GTP-binding protein YqeH [Lysinibacillus fusiformis ZC1]
Length = 367
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 188/381 (49%), Gaps = 48/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L++Y +++ V+ L D DF R L + +++ +VD DF+GS+
Sbjct: 35 VICQRCFRLKNYNEIQPVS----LTDDDF----LRILNGLGTQQGLIVKIVDIFDFNGSW 86
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V G P V+L+ K DLLP S+ P + +W+++ A+
Sbjct: 87 LPGLHRFV----------------GKNP-VLLIANKADLLPKSVKPKKVINWLKREAKAL 129
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ + L VSA K G+ ++ +D K NV+ +G N GKST +N I K
Sbjct: 130 GLQPVDVL-LVSAHKGKGMAEAME-AIDEYRKGQNVYVVGCTNVGKSTFINRIIKQAT-- 185
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
G+GE +T + PGTTL ++ + L + L+DTPG+++ +Q+ + E
Sbjct: 186 --GEGEV------ITTSHFPGTTLDMIDIP--LDDGSALYDTPGIINHHQMAHHIDSSEL 235
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
K + KE+KP+ Y+ AG ++ I L R D + + T+ + LP+H K E A
Sbjct: 236 KYIMPKKEIKPKVYQQNAGQTLFIGALARFDFIQGDRSAF--TIHVANDLPIHRTKLEKA 293
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ E+H G L PP + +++L VR EF S + D+ +GLGW +V+
Sbjct: 294 DALYEEHKGELLAPPTAD-FIDQLPPLVRHEF-----SIKEAKTDVVFSGLGWITVQ-HA 346
Query: 514 EAALGVWTYEGVDIVLRNALL 534
+ + +GV + +R +L+
Sbjct: 347 NVVVAAYAPKGVQVSIRPSLI 367
>gi|163942091|ref|YP_001646975.1| GTP-binding protein YqeH [Bacillus weihenstephanensis KBAB4]
gi|229013556|ref|ZP_04170689.1| hypothetical protein bmyco0001_39650 [Bacillus mycoides DSM 2048]
gi|229062034|ref|ZP_04199359.1| hypothetical protein bcere0026_41060 [Bacillus cereus AH603]
gi|229135161|ref|ZP_04263961.1| hypothetical protein bcere0014_40630 [Bacillus cereus BDRD-ST196]
gi|229169083|ref|ZP_04296798.1| hypothetical protein bcere0007_40350 [Bacillus cereus AH621]
gi|423368386|ref|ZP_17345818.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD142]
gi|423489519|ref|ZP_17466201.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BtB2-4]
gi|423495242|ref|ZP_17471886.1| ribosome biogenesis GTPase YqeH [Bacillus cereus CER057]
gi|423497964|ref|ZP_17474581.1| ribosome biogenesis GTPase YqeH [Bacillus cereus CER074]
gi|423512449|ref|ZP_17488980.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA2-1]
gi|423519035|ref|ZP_17495516.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA2-4]
gi|423591669|ref|ZP_17567700.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD048]
gi|423660820|ref|ZP_17635989.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM022]
gi|423669921|ref|ZP_17644950.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM034]
gi|423673875|ref|ZP_17648814.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM062]
gi|163864288|gb|ABY45347.1| Nitric-oxide synthase [Bacillus weihenstephanensis KBAB4]
gi|228614311|gb|EEK71421.1| hypothetical protein bcere0007_40350 [Bacillus cereus AH621]
gi|228648289|gb|EEL04324.1| hypothetical protein bcere0014_40630 [Bacillus cereus BDRD-ST196]
gi|228717186|gb|EEL68861.1| hypothetical protein bcere0026_41060 [Bacillus cereus AH603]
gi|228747716|gb|EEL97586.1| hypothetical protein bmyco0001_39650 [Bacillus mycoides DSM 2048]
gi|401080713|gb|EJP88997.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD142]
gi|401151335|gb|EJQ58787.1| ribosome biogenesis GTPase YqeH [Bacillus cereus CER057]
gi|401160090|gb|EJQ67469.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA2-4]
gi|401161251|gb|EJQ68618.1| ribosome biogenesis GTPase YqeH [Bacillus cereus CER074]
gi|401231802|gb|EJR38304.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD048]
gi|401299048|gb|EJS04648.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM034]
gi|401300861|gb|EJS06450.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM022]
gi|401310241|gb|EJS15566.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM062]
gi|402431755|gb|EJV63819.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BtB2-4]
gi|402449420|gb|EJV81257.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA2-1]
Length = 368
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 188/381 (49%), Gaps = 47/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L+HY +++DV+ L D DF R L + ++V+ +VD DF+GS+
Sbjct: 35 VICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGQSDALVVKIVDIFDFNGSW 86
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V + +V+LV K DL+P S+ + +HW+R A++
Sbjct: 87 LPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAKQL 129
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ K + +SA K G+ L D ++ + +V+ +G N GKST +N + K
Sbjct: 130 GL-KPEDVFLISAAKGQGIAELAD-AIEHYREGKDVYVVGCTNVGKSTFINRMIKEFS-- 185
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
E +N++ T + PGTTL ++ + L + L+DTPG+++ +Q+ + ++
Sbjct: 186 ----DETENVI---TTSHFPGTTLDLIDIP--LDETSSLYDTPGIINHHQMAHYVGKQSL 236
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
KL+ E+KP +++ ++ GL R D + T S L +H K E A
Sbjct: 237 KLITPTTEVKPMVFQLNEEQTLFFGGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKA 294
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ EKH G L PP E+ +E + K+V+ EF++ D+ +GLGW +V G
Sbjct: 295 DELYEKHAGELLNPPTPEE-LENMPKFVKYEFNIR-----EPKTDVVFSGLGWVTVNESG 348
Query: 514 EAALGVWTYEGVDIVLRNALL 534
A + +GV + LR +L+
Sbjct: 349 -AKIVAHVPKGVSVSLRKSLI 368
>gi|423400818|ref|ZP_17377991.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-2]
gi|423478477|ref|ZP_17455192.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6X1-1]
gi|401653808|gb|EJS71351.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-2]
gi|402428639|gb|EJV60736.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6X1-1]
Length = 368
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 189/381 (49%), Gaps = 47/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L+HY +++DV+ L D DF R L + ++V+ +VD DF+GS+
Sbjct: 35 VICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGKSDALVVKIVDIFDFNGSW 86
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V + +V+LV K DL+P S+ + +HW+R A++
Sbjct: 87 LPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAKQL 129
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ K + +SA K G+ L D + G + +V+ +G N GKST +N + K
Sbjct: 130 GL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFINRMIKEFS-- 185
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
E +N++ T + PGTTL ++ + L ++ L+DTPG+++ +Q+ + +E
Sbjct: 186 ----DETENVI---TTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQMAHYVGKESL 236
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
KL+ KE+KP +++ ++ +GL R D + T S L +H K E A
Sbjct: 237 KLITPTKEIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKA 294
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ + H G L PP E+ +E + + V+ EF++ D+ +GLGW +V G
Sbjct: 295 DELYKNHAGDLLSPPTPEE-LENMPELVKYEFNIR-----EPKTDVVFSGLGWVTVNEPG 348
Query: 514 EAALGVWTYEGVDIVLRNALL 534
A + +GV + LR +L+
Sbjct: 349 -AKIVAHVPKGVSVSLRKSLI 368
>gi|375088310|ref|ZP_09734650.1| ribosome biogenesis GTPase YqeH [Dolosigranulum pigrum ATCC 51524]
gi|374562348|gb|EHR33678.1| ribosome biogenesis GTPase YqeH [Dolosigranulum pigrum ATCC 51524]
Length = 372
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 196/452 (43%), Gaps = 87/452 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q N GY P+ L EN
Sbjct: 8 ICIGCGATIQSDNKDKMGYV--PASAL-------------------------------EN 34
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
++E + C RC LRHY +V DV L DF + L + + R++++
Sbjct: 35 ------RNEDDLYCKRCFRLRHYNEVSDVE----LTSDDFLNM----LNNINDQRALIVN 80
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
+VD DF+GS + + +GN P V++V K+DLLP SL
Sbjct: 81 IVDIIDFNGSVITGIERF----------------AGNNP-VMIVGNKVDLLPKSLKHNHI 123
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +R E G+ + + +SAVK + L+D + + G R +V+ +G N GKSTL
Sbjct: 124 RQWLTERVHELGLRPV-DISLISAVKRDSVGQLLDKIEKIRGNR-DVYVVGTTNVGKSTL 181
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K R +T + +PGTTLG ++E L L DTPG+
Sbjct: 182 INQIVKLATDQR----------DLITTSYIPGTTLG--KIEIPLDDGHVLVDTPGIFQSG 229
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L+ +E ++ K +KP TY++ ++ + G+ R D + + +V V+AS
Sbjct: 230 QMAHVLSHKEMSIITPKKTIKPVTYQLNEKQTLFLGGVARFDYKGGAGRQSFV-VYASNA 288
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K E A + + G+ PP+ E E L + F + G S DI +
Sbjct: 289 LDIHRTKLEKADALYQAQKGKMFTPPLPEN-AEHLPDMKQYHFKLDGPS------DIVFS 341
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW V G +GVD+ +R ++
Sbjct: 342 GLGWVKVNASNVDVSG-HAPKGVDVFVRKPMI 372
>gi|377809846|ref|YP_005005067.1| ribosome biogenesis GTPase YqeH [Pediococcus claussenii ATCC
BAA-344]
gi|361056587|gb|AEV95391.1| ribosome biogenesis GTPase YqeH [Pediococcus claussenii ATCC
BAA-344]
Length = 371
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 127/453 (28%), Positives = 193/453 (42%), Gaps = 91/453 (20%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
VC GCG +Q +NP GY ES L+ G L
Sbjct: 9 VCIGCGAHIQTSNPDELGY-------------------TPESALRKGLESGELY------ 43
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVL 201
C RC LRHY ++ V L D DF R+L+S S S+++
Sbjct: 44 -------------CQRCFRLRHYNEIAPVN----LTDDDF-----RRLLSQISETDSLIV 81
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V+D D +GS + + + D V+LV K D+LP SL R
Sbjct: 82 YVMDLFDVNGSLIPGLHRFIGDN-----------------EVLLVGNKEDILPKSLKRPR 124
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
+ W+RQ+A +GI I + +++ KN + + + ++ +V+ +G N GKST
Sbjct: 125 MKEWLRQQAFANGIRPIDVV--LTSAKNRHEVNNLFEAIEKYRNGKDVYVVGVTNVGKST 182
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+N + +I +T + PGTTL ++E ++ L DTPG++H
Sbjct: 183 LINQLIAI----------RNDIKDLITTSRFPGTTLD--KIEIPFDEESSLIDTPGIVHR 230
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
Q+ L E+ K K +KPR +++ ++ + L R D + S+ V +
Sbjct: 231 EQMAHVLEPEDLKYAAPQKTIKPRVFQLNGDQTLFMGALARFDYQRSNGP---VVAYFEN 287
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L +H K ENA EKH G L PP E+L K ++ F VS S DI
Sbjct: 288 NLNIHRTKLENADQFYEKHAGELLTPPTN-GNFEKLPKLIKHNFSVSEKS------DIVF 340
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW SV A + W EG+ ++ R A++
Sbjct: 341 EGLGWISV--PAGAIITGWAPEGISVITRKAMI 371
>gi|408411085|ref|ZP_11182268.1| Ribosome biogenesis GTPase YqeH [Lactobacillus sp. 66c]
gi|409349111|ref|ZP_11232656.1| Ribosome biogenesis GTPase YqeH [Lactobacillus equicursoris CIP
110162]
gi|407874748|emb|CCK84074.1| Ribosome biogenesis GTPase YqeH [Lactobacillus sp. 66c]
gi|407878383|emb|CCK84714.1| Ribosome biogenesis GTPase YqeH [Lactobacillus equicursoris CIP
110162]
Length = 369
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 203/451 (45%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q + PGY P L KV + ENE
Sbjct: 7 CIGCGASLQSEDKSLPGYL--PQSALQKV-------------------------LDGENE 39
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V C RC LRHY ++ V ++N DF L S S +++++ V
Sbjct: 40 E---------VYCQRCFRLRHYNEIMPVALDN--DDF------LALLNSLSSKKALIVNV 82
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF S + + V +N+ +LV K DL P + ++ +
Sbjct: 83 VDLFDFSNSLIASLKRFVG----QND-------------FILVGNKFDLFPKNSKESKIK 125
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ A G+ ++ +SA K L LI ++ + +V+ +G N GKSTL+
Sbjct: 126 DWMRQEANRMGLYP-KEIFLISAAKKKNLDDLIK-YLNANSQDQDVYFVGTTNVGKSTLI 183
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + G+ ++++ T + PGTTL ++E L L DTPG+L Q
Sbjct: 184 NAIIDKM-------GDVQDLI---TTSRFPGTTLD--KIEIPLDNGHFLVDTPGILTKKQ 231
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ +RL+ +E LV+ K LKP TY++ G++I +AGL R+D + S TV+AS +
Sbjct: 232 LASRLSVKELDLVSPKKPLKPATYQLLPGNTIFLAGLGRIDYLQGPSTSF--TVYASRSM 289
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTE A KH G L PP E ++L +E+H+ S D+ AG
Sbjct: 290 YVHRTKTEKADEFYAKHVGELLTPPSAE---DDLPPLKGQEYHIKYRS------DVLFAG 340
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+G+ +V + +T G+ + R AL+
Sbjct: 341 VGFITV--PEGCVIKAYTPGGIGLGTRRALI 369
>gi|423483918|ref|ZP_17460608.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6X1-2]
gi|401141469|gb|EJQ49024.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6X1-2]
Length = 368
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 204/451 (45%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q N GY P+ +L K
Sbjct: 7 CIGCGVEIQTENKNEVGY--APASSLEK-------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L+HY +++DV+ L D DF R L + ++V+ +
Sbjct: 33 --------EQVICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGQSDALVVKI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V + +V+LV K DL+P S+ + +
Sbjct: 77 VDIFDFNGSWLPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
HW+R A++ G+ K + +SA K G+ L D ++ + +V+ +G N GKST +
Sbjct: 120 HWMRYSAKQLGL-KPEDVFLISAAKGQGITELAD-AIEYYREGKDVYVVGCTNVGKSTFI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + K E +N++ T + PGTTL ++ + L + L+DTPG+++ +Q
Sbjct: 178 NRMIKEFS------DETENVI---TTSHFPGTTLDLIDIP--LDETSSLYDTPGIINHHQ 226
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + ++ KL+ E+KP +++ ++ GL R D + T S L
Sbjct: 227 MAHYVGKQSLKLITPTTEVKPMVFQLNEEQTLFFGGLARFDYVSGGRRAF--TCHFSNRL 284
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A + E+H G L PP E+ +E + ++V+ EF++ D+ +G
Sbjct: 285 TIHRTKLEKADELYERHAGELLNPPTPEE-LENMPEFVKYEFNIR-----EPKTDVVFSG 338
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V G A + +GV + LR +L+
Sbjct: 339 LGWVTVNESG-AKIVAHVPKGVSVSLRKSLI 368
>gi|336234611|ref|YP_004587227.1| ribosome biogenesis GTPase YqeH [Geobacillus thermoglucosidasius
C56-YS93]
gi|423719182|ref|ZP_17693364.1| ribosome biogenesis GTPase yqeH [Geobacillus thermoglucosidans
TNO-09.020]
gi|335361466|gb|AEH47146.1| ribosome biogenesis GTPase YqeH [Geobacillus thermoglucosidasius
C56-YS93]
gi|383368085|gb|EID45360.1| ribosome biogenesis GTPase yqeH [Geobacillus thermoglucosidans
TNO-09.020]
Length = 367
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 203/406 (50%), Gaps = 59/406 (14%)
Query: 137 VFEAENET-------SEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRK 189
+ ++E+ET S ++K E V+C RC L+HY +V+DV L D DF +
Sbjct: 13 IIQSEDETKPGYAPKSVLEKEE--VICQRCFRLKHYNEVQDVE----LTDDDF----LKI 62
Query: 190 LMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTK 249
L S + ++V+ +VD DF+GS+ + + V++ ++LV K
Sbjct: 63 LHSIGQSEALVVKIVDIFDFNGSWLPGLHRFVANNP-----------------ILLVGNK 105
Query: 250 IDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVD-LAGKRGN 308
DLLP S+ + HW+ Q A + G+ K + VSAVK G+ ++ + GK N
Sbjct: 106 ADLLPKSVKYPKLIHWMAQMANDLGL-KPVDICLVSAVKGIGIAKAMEAIEKHRLGK--N 162
Query: 309 VWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPA 368
V+ +G N GKST +N I + G+G N++ T + PGTTL I+ + L
Sbjct: 163 VYVVGCTNVGKSTFINRIIQET-TGKG------NVI---TTSYFPGTTLDIIEIP--LDD 210
Query: 369 QAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEES 428
A L+DTPG+++ +Q+ + +++ K++ +E+ P+ Y++ ++ GL R+D +
Sbjct: 211 GAALYDTPGIINHHQMAHFVDKKDLKIITPKREIHPKVYQLNEQQTLFFGGLARLDYIKG 270
Query: 429 SVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVS 488
S +V +A+ LP+H K E A + K FG L PP + +++ V F +
Sbjct: 271 GRRS-FVCYFANE-LPIHRTKLEKADALYAKQFGELLSPP-SKHYIDQFPPLVAHTFTIK 327
Query: 489 GSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
DI +GLGW + G A + + +GVDI++R +L+
Sbjct: 328 -----ERKTDIVFSGLGWVTCNEPG-AQVVAYAPKGVDILIRKSLI 367
>gi|421193547|ref|ZP_15650793.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB553]
gi|399971706|gb|EJO05945.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB553]
Length = 385
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 204/439 (46%), Gaps = 88/439 (20%)
Query: 75 DEATPKLT---VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLK 131
D+ T L VC GCG Q T PGY N +K+R S+L
Sbjct: 6 DQVTQLLNDGIVCIGCGARFQSTKRGVPGYL-----NEHKLR-SYL-------------- 45
Query: 132 KGGLVVFEAENETSEVKKHEKPV--VCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRK 189
S + + P+ +C RC L++Y +++ V FD DH +
Sbjct: 46 -------------SSLNSVDDPINLLCERCFKLKNYNQIEPVA-------FDSDH-FQKI 84
Query: 190 LMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTK 249
L S S +++VL +VD D GS + + + GN P VVLV K
Sbjct: 85 LTSISDKKALVLYLVDLFDVGGSMINGLTRFI----------------GNNP-VVLVGNK 127
Query: 250 IDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNV 309
D+LP S+ + + + + A+ +GI K+ K +SA K + L++++ D + +
Sbjct: 128 FDILPKSVKKNKIANRLTKEAKNEGI-KVLKTVVLSADKGDSGQYLLEEISDYIDEYEEI 186
Query: 310 WAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQ 369
+ +G N GKSTL+N I K + +GRG S +T + PGTTL ++E L +
Sbjct: 187 FVVGVTNVGKSTLINQIIKQI-SGRG---------SVITTSRFPGTTLD--KIEIPLTEK 234
Query: 370 AKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESS 429
++ DTPG++H +Q+ + ++ K + NKE+K T ++ G +I +AGL +D S
Sbjct: 235 TRVIDTPGIIHDSQMAHFIDSKDFKYLLPNKEVKAGTLQLSKGQAIFLAGLGWIDFLNKS 294
Query: 430 VESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSG 489
I VT + + LH GK ENA + GR L+P + ++E + +KE +
Sbjct: 295 --KISVTAYFENNIELHRGKIENAEKLFSSQAGRLLKPTV----LKEYRELEKKEIKLKA 348
Query: 490 SSWDSSSVDIAAAGLGWFS 508
+ D A AGLGWF+
Sbjct: 349 NQ------DFAIAGLGWFT 361
>gi|418325685|ref|ZP_12936891.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU071]
gi|365228287|gb|EHM69472.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU071]
Length = 366
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 205/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q N + PGY P N+
Sbjct: 7 CIGCGAPLQSENKEAPGYV--PEHNM---------------------------------- 30
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L++Y +V+DV +E+ DF + L S + +++ V
Sbjct: 31 ------FREDVICRRCFRLKNYNEVQDVGMESE----DFLNL----LTGLSEKKGIIVNV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GSF + ++V GN +++LV KIDLLP ++ R +
Sbjct: 77 VDVFDFEGSFINAIQRIV----------------GN-KKIILVANKIDLLPKQINQRRVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R+ AR+ G+ + +SA K WG+ L+ + + K +V+ +G N GKSTL+
Sbjct: 120 EWLRKSARKYGLEA-EDVVLISANKGWGIDELLQSINHVRNK-DDVYIVGTTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N K ++ G EK++V T + PGTTL ++ + L ++ +FDTPG++ +Q
Sbjct: 178 N---KLIEQSVG----EKDVV---TTSRFPGTTLDMIDIP--LDEKSFMFDTPGIIQSHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+T ++ E K++ E+K R Y++ ++ GL R+D + + S L
Sbjct: 226 MTNYVSENELKIIIPKNEIKQRVYQLNEKQTLFFGGLARIDYVSGGKRPL--VCFFSNDL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTE A + + G L PP +E ++ + + DI +G
Sbjct: 284 NIHRTKTEKANDLWKSQLGALLSPP------QEAQQFNLNDVKAVRLETGKTKRDIMISG 337
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LG+ ++ A + V + VD++LRN++L
Sbjct: 338 LGFITI--DAGAKVIVRVPKHVDVILRNSIL 366
>gi|229031986|ref|ZP_04187971.1| hypothetical protein bcere0028_40310 [Bacillus cereus AH1271]
gi|228729341|gb|EEL80333.1| hypothetical protein bcere0028_40310 [Bacillus cereus AH1271]
Length = 368
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 188/381 (49%), Gaps = 47/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L+HY +++DV+ L D DF R L + ++V+ +VD DF+GS+
Sbjct: 35 VICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGKSDALVVKIVDIFDFNGSW 86
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V + +V+LV K DL+P S+ + +HW+R A++
Sbjct: 87 LPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAKQL 129
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ K + +SA K G+ L D + G + +V+ +G N GKST +N + K
Sbjct: 130 GL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFINRMIKEFS-- 185
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
E +N++ T + PGTTL ++ + L ++ L+DTPG+++ +Q+ + +E
Sbjct: 186 ----DETENVI---TTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQMAHYVGKESL 236
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
KL+ KE+KP +++ ++ +GL R D + T S L +H K E A
Sbjct: 237 KLITPTKEIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKA 294
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ + H G L PP E+ +E + V+ EF++ D+ +GLGW +V G
Sbjct: 295 DELYKNHAGDLLSPPTPEE-LENMPDLVKYEFNIR-----EPKTDVVFSGLGWVTVNESG 348
Query: 514 EAALGVWTYEGVDIVLRNALL 534
A + +GV + LR +L+
Sbjct: 349 -AKIVAHVPKGVSVSLRKSLI 368
>gi|341821188|emb|CCC57532.1| GTP-binding protein [Weissella thailandensis fsh4-2]
Length = 380
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 199/451 (44%), Gaps = 87/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+Q N GY + S LK FE +
Sbjct: 17 CIGCGALIQTDNKNEIGY----------------------TPMSALLKS-----FENDE- 48
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V C RC LRHY +++ V L D DF R L + S+V+ V
Sbjct: 49 ----------VFCQRCFRLRHYNEIQPVN----LTDDDF----RRLLEQIADTNSLVVYV 90
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF GS + + V + V+LV K+D+LP SL T+ +
Sbjct: 91 MDVFDFSGSLIPGLHRFVGNN-----------------DVLLVGNKVDVLPRSLKRTKIK 133
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ+A G+ + +++ KN + + D+++ +V+ +G N GKSTL+
Sbjct: 134 DWMRQQANIAGLRPLDVA--LTSGKNGDAIAHLLDLIEKYRHGRSVYVVGVTNVGKSTLI 191
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K V G+ +++ T + PGTTL R+E L ++ + DTPG++H +Q
Sbjct: 192 NQIIKEVT------GDRDDVI---TTSRFPGTTLD--RIEIPLDDESNIVDTPGIIHQDQ 240
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ + K V+ KE+KP T+++ AG ++ + L R D + I T + L
Sbjct: 241 MAHYLSAADLKYVSPQKEIKPTTFQLNAGQTLFMGALARFDYIQGDRAGI--TAYFENNL 298
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K NA +KH G L PP ++EL R EF + DI G
Sbjct: 299 LIHRTKLANADNFYDKHAGDLLAPPTAAG-LDELPPLQRHEFKTIVKT------DIVIDG 351
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V + + W +GV ++ R A++
Sbjct: 352 LGWITV--PADTVVAGWAPKGVSVLTRRAMI 380
>gi|228923088|ref|ZP_04086380.1| hypothetical protein bthur0011_40680 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|423582543|ref|ZP_17558654.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD014]
gi|228836586|gb|EEM81935.1| hypothetical protein bthur0011_40680 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|401213422|gb|EJR20163.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD014]
Length = 368
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 205/451 (45%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q N GY P+ +L K
Sbjct: 7 CIGCGVEIQTENKNEVGY--APASSLEK-------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L+HY +++DV+ L D DF R L + ++V+ +
Sbjct: 33 --------EQVICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGKSDALVVKI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V + +V+LV K DL+P S+ + +
Sbjct: 77 VDIFDFNGSWLPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
HW+R A++ G+ K + +SA K G+ L D + G + +V+ +G N GKST +
Sbjct: 120 HWMRYSAKQLGL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + K E +N++ T + PGTTL ++ + L ++ L+DTPG+++ +Q
Sbjct: 178 NRMIKEFS------DETENVI---TTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQ 226
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + ++ KL+ KE+KP +++ ++ +GL R D + T S L
Sbjct: 227 MAHYVGKQSLKLITPTKEIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRL 284
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A + + H G L PP E+ +E + + V+ EF++ D+ +G
Sbjct: 285 TIHRTKLEKADELYKNHAGDLLSPPTPEE-LENMPELVKYEFNIR-----EPKTDVVFSG 338
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V G A + +GV + LR +L+
Sbjct: 339 LGWVTVNEPG-AKIVAHVPKGVSVSLRKSLI 368
>gi|229104967|ref|ZP_04235623.1| hypothetical protein bcere0019_41050 [Bacillus cereus Rock3-28]
gi|423615323|ref|ZP_17591157.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD115]
gi|228678461|gb|EEL32682.1| hypothetical protein bcere0019_41050 [Bacillus cereus Rock3-28]
gi|401261002|gb|EJR67169.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD115]
Length = 368
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 204/451 (45%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q N GY P+ +L K
Sbjct: 7 CIGCGVEIQTENKNEVGY--APASSLEK-------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L+HY +++DV+ L D DF R L + ++V+ +
Sbjct: 33 --------EQVICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGKSDALVVKI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V + +V+LV K DL+P S+ + +
Sbjct: 77 VDIFDFNGSWLPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
HW+R A++ G+ K + +SA K G+ L D ++ +V+ +G N GKST +
Sbjct: 120 HWMRYSAKQLGL-KPEDVFLISAAKGQGIAELAD-AIEYYRDGKDVYVVGCTNVGKSTFI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + K E +N++ T + PGTTL ++ + L ++ L+DTPG+++ +Q
Sbjct: 178 NRMIKEFS------DETENVI---TTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQ 226
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + +E KL+ KE+KP +++ ++ +GL R D + T S L
Sbjct: 227 MAHYVGKESLKLITPTKEIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRL 284
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A + + H G L PP E+ +E + + V+ EF++ D+ +G
Sbjct: 285 TIHRTKLEKADELYKNHAGDLLSPPTPEE-LENMPELVKYEFNIR-----EPKTDVVFSG 338
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V G A + +GV + LR +L+
Sbjct: 339 LGWVTVNESG-AKIVAHVPKGVSVSLRKSLI 368
>gi|149183162|ref|ZP_01861611.1| YqeH [Bacillus sp. SG-1]
gi|148849145|gb|EDL63346.1| YqeH [Bacillus sp. SG-1]
Length = 371
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 196/394 (49%), Gaps = 58/394 (14%)
Query: 145 SEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMV 203
S ++K E +VC RC L+HY +V+DV+ L D DF K+++ G +++ V
Sbjct: 32 SSLEKEE--IVCQRCFRLKHYNEVQDVS----LTDDDF-----LKILNEIGKGEGLIVKV 80
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V GN P V+L+ K+DLLP S+ P++
Sbjct: 81 VDIFDFNGSWLPGLHRFV----------------GNNP-VLLIGNKVDLLPKSVKPSKLI 123
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+W++ +A++ G+ K + +SA K ++ ++ + R +V+ +G N GKST +
Sbjct: 124 NWMKFQAKQLGL-KPVDVKLMSAEKGQYIEEAVEAIEQYRDGR-SVYVVGCTNVGKSTFI 181
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + V EK+I+ T + PGTTL ++ + L L DTPG+++ +Q
Sbjct: 182 NRVIHHVTG-------EKDII---TTSHFPGTTLDMIEIP--LDDGEALIDTPGIINHHQ 229
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + + + K + KE+KP+ +++ G ++ GL R D S + S L
Sbjct: 230 MAHYVDKRDLKYITPKKEIKPKVFQLNEGQTLFFGGLSRFDYLSGGRRSF--VCYLSNEL 287
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKW---VRKEFHVSGSSWDSSSVDIA 500
+H K + A + E H G LQPP R +++G++ VR EF V DI
Sbjct: 288 NIHRTKVDKADELYENHAGVMLQPP----RKDDMGEFPELVRHEFRVK-----EGKTDIV 338
Query: 501 AAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW ++ G A + +GV + LR +L+
Sbjct: 339 FSGLGWVTINDPG-ATIAAHVPKGVSVFLRKSLI 371
>gi|423612546|ref|ZP_17588407.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD107]
gi|401246135|gb|EJR52487.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD107]
Length = 368
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 204/451 (45%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q N GY P+ +L K
Sbjct: 7 CIGCGVEIQTENKNEVGY--APASSLEK-------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L+HY +++DV+ L D DF R L + ++V+ +
Sbjct: 33 --------EQVICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGQSDALVVKI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V + +V+LV K DL+P S+ + +
Sbjct: 77 VDIFDFNGSWLPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
HW+R A++ G+ K + +SA K G+ L + + G + +V+ +G N GKST +
Sbjct: 120 HWMRYSAKQLGL-KPEDVFLISAAKGQGIAELAEAIEYYRGGK-DVYVVGCTNVGKSTFI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + K E +N++ T + PGTTL ++ + L + L+DTPG+++ +Q
Sbjct: 178 NRMIKEFS------DETENVI---TTSHFPGTTLDLIDIP--LDEASSLYDTPGIINHHQ 226
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + ++ KL+ E+KP +++ ++ GL R D + T S L
Sbjct: 227 MAHYVGKQSLKLITPTTEIKPMVFQLNEEQTLFFGGLARFDYVSGGRRAF--TCHFSNRL 284
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A + E+H G L PP E+ +E + ++V+ EF++ D+ +G
Sbjct: 285 TIHRTKLEKADELYERHAGELLNPPTPEE-LENMPEFVKYEFNIR-----EPKTDVVFSG 338
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V G A + +GV + LR +L+
Sbjct: 339 LGWVTVNESG-AKIVAHVPKGVSVSLRKSLI 368
>gi|332638513|ref|ZP_08417376.1| GTPase YqeH [Weissella cibaria KACC 11862]
Length = 380
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 181/382 (47%), Gaps = 51/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMS-ASGARSVVLMVVDAADFDGS 212
V+C RC LRHY +++ V L D DF R L++ S S+V+ V+D DF GS
Sbjct: 49 VLCQRCFRLRHYNEIQPVD----LTDDDF-----RLLLNEISTTDSLVVYVMDVFDFSGS 99
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + V G P V+LV K+D+LP SL ++ + W+RQ+A
Sbjct: 100 LIPGLHRFV----------------GKNP-VLLVGNKVDVLPKSLKRSKIKDWMRQQANV 142
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ I + S + L+D + R +V+ +G N GKSTL+N I K
Sbjct: 143 AGLRPI-DVMLTSGKSGDDVPELLDMIEKYREGR-SVYVVGVTNVGKSTLINQIIKD--- 197
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
G+ K+++ T + PGTTL R+E L + DTPG++H +Q+ LT ++
Sbjct: 198 ---ATGDSKDVI---TTSRFPGTTLD--RIEIPLDDDTFIIDTPGIIHQDQMAHYLTPKD 249
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V+ KELKP+TY++ ++ + L R D + E +T + L +H K E
Sbjct: 250 LKYVSPQKELKPKTYQLNPEQTLFMGALARFDFIQG--EKAGITAYFENNLMIHRTKLEK 307
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A KH G L PP E ++ L R EF V + DI GLGW +V
Sbjct: 308 ADEFYSKHAGELLMPPTTEN-LDMLPPLQRHEFKV------TEKTDIVIDGLGWITV--P 358
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
+ W EGV ++ R A++
Sbjct: 359 ANTVVAGWAPEGVSVLTRRAMI 380
>gi|229076010|ref|ZP_04208983.1| hypothetical protein bcere0024_40490 [Bacillus cereus Rock4-18]
gi|229098807|ref|ZP_04229745.1| hypothetical protein bcere0020_40330 [Bacillus cereus Rock3-29]
gi|407706863|ref|YP_006830448.1| stage IV sporulation protein FA [Bacillus thuringiensis MC28]
gi|423440915|ref|ZP_17417821.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4X2-1]
gi|423448917|ref|ZP_17425796.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5O-1]
gi|423463980|ref|ZP_17440748.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6O-1]
gi|423533343|ref|ZP_17509761.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB2-9]
gi|423541402|ref|ZP_17517793.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB4-10]
gi|228684651|gb|EEL38591.1| hypothetical protein bcere0020_40330 [Bacillus cereus Rock3-29]
gi|228707122|gb|EEL59322.1| hypothetical protein bcere0024_40490 [Bacillus cereus Rock4-18]
gi|401129511|gb|EJQ37194.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5O-1]
gi|401172590|gb|EJQ79811.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB4-10]
gi|402417576|gb|EJV49876.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4X2-1]
gi|402420247|gb|EJV52518.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6O-1]
gi|402463562|gb|EJV95262.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB2-9]
gi|407384548|gb|AFU15049.1| Yqeh Gtpase [Bacillus thuringiensis MC28]
Length = 368
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 204/451 (45%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q N GY P+ +L K
Sbjct: 7 CIGCGVEIQTENKNEVGY--APASSLEK-------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L+HY +++DV+ L D DF R L + ++V+ +
Sbjct: 33 --------EQVICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGRSDALVVKI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V + +V+LV K DL+P S+ + +
Sbjct: 77 VDIFDFNGSWLPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
HW+R A++ G+ K + +SA K G+ L D ++ +V+ +G N GKST +
Sbjct: 120 HWMRYSAKQLGL-KPEDVFLISAAKGQGIAELAD-AIEYYRDGKDVYVVGCTNVGKSTFI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + K E +N++ T + PGTTL ++ + L ++ L+DTPG+++ +Q
Sbjct: 178 NRMIKEFS------DETENVI---TTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQ 226
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + +E KL+ KE+KP +++ ++ +GL R D + T S L
Sbjct: 227 MAHYVGKESLKLITPTKEIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRL 284
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A + + H G L PP E+ +E + + V+ EF++ D+ +G
Sbjct: 285 TIHRTKLEKADELYKNHAGDLLSPPTPEE-LENMPELVKYEFNIR-----EPKTDVVFSG 338
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V G A + +GV + LR +L+
Sbjct: 339 LGWVTVNESG-AKIVAHVPKGVSVSLRKSLI 368
>gi|326803787|ref|YP_004321605.1| ribosome biogenesis GTPase YqeH [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650122|gb|AEA00305.1| ribosome biogenesis GTPase YqeH [Aerococcus urinae
ACS-120-V-Col10a]
Length = 370
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/457 (25%), Positives = 199/457 (43%), Gaps = 88/457 (19%)
Query: 78 TPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVV 137
T ++ C GCG +Q PK GY +S + ++ G L
Sbjct: 2 TEEVLYCIGCGASLQTDQPKERGY-------------------TPKSAYDKGVESGDLY- 41
Query: 138 FEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR 197
C RC LRHY +++ V + P + L S
Sbjct: 42 ------------------CQRCFKLRHYNQLEKV---QMTP-----AEFRQILHEISEDD 75
Query: 198 SVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSL 257
++++ V+D D + + ++V + +V V K+DLLPS +
Sbjct: 76 ALIVNVIDIFDVQSTIIPALERLVGNN-----------------DIVFVANKVDLLPSDV 118
Query: 258 SPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNA 317
++ E W+R+ ++ G K + SAVKN + L +D K NV+ +G N
Sbjct: 119 KSSKIEAWLRKYLKDQGF-KARNVFLTSAVKNKAIDDLFS-FIDQHRKGRNVYIVGVSNV 176
Query: 318 GKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPG 377
GKSTL+N++ ++ G +++ T + PGTTL ++++ + L DTPG
Sbjct: 177 GKSTLINSMLRA-------QGFSDSVI---TTSQFPGTTLDLIKIP--FDEASDLIDTPG 224
Query: 378 LLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTV 437
+L +Q+TT L + + + K +KPRT+++ G S+ + G+ R D E + + VTV
Sbjct: 225 ILKDSQMTTLLDYKSIEQILPQKRIKPRTFQLNPGQSLFLGGMARFDYLEGAKQG--VTV 282
Query: 438 WASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSV 497
+ S + +H KTE + + KH G L PP VE V + + +
Sbjct: 283 YLSNQVDIHRRKTEGSDEFLAKHQGDLLTPP-SASEVERFPDLVSQVYTI------KEPC 335
Query: 498 DIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
D+ AGLGW S++ G+ A ++ + VDI R L+
Sbjct: 336 DLVIAGLGWLSIKKPGKVA--IYAPKAVDIFQRKPLI 370
>gi|331701565|ref|YP_004398524.1| ribosome biogenesis GTPase YqeH [Lactobacillus buchneri NRRL
B-30929]
gi|329128908|gb|AEB73461.1| ribosome biogenesis GTPase YqeH [Lactobacillus buchneri NRRL
B-30929]
Length = 378
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 198/451 (43%), Gaps = 87/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T+ GY ES L+ G
Sbjct: 15 CVGCGAAVQTTDKNALGY-------------------TPESALKKGLENG---------- 45
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V C RC LRHY ++ V+ L D DF + L S S S+++ V
Sbjct: 46 ---------EVYCQRCFRLRHYNEIAPVS----LSDDDF----LKLLTSISDTDSLIVYV 88
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD D +GS + + V GN P V+LV K+D+LP +L + +
Sbjct: 89 VDIFDVNGSLIPGLHRFV----------------GNNP-VLLVGNKLDILPKALKHNKVK 131
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ+A GI I + +SA N+ + L+D + + +V+ +G N GKSTL+
Sbjct: 132 DWLRQQANAAGIRPI-DVELISAKTNFDIDRLLDQIEKYRQGK-DVYVVGVTNVGKSTLI 189
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N+I + + I +T + PGTTL R++ L L DTPG++ P Q
Sbjct: 190 NSIVR----------QSTGIKELITTSRFPGTTLD--RIDIPLNDGHNLVDTPGIIQPEQ 237
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ +E LV K +KP+ Y++ G ++ G+ R D + TV+A L
Sbjct: 238 MAHHLSGKELNLVTPQKTIKPKGYQLNPGQTLFFGGVARFDYNSGEKRHGF-TVYAENNL 296
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K ENA H G L PP +++ + + E H S+ S D+ G
Sbjct: 297 FIHRTKLENADEFYATHVGSFLTPPTEDQKAD----FPALEPHAFKSTEKS---DLVIEG 349
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V +G + G W +GV +++R A++
Sbjct: 350 LGWVTVP-EGVSVTG-WAPKGVSVLMRPAMI 378
>gi|423598348|ref|ZP_17574348.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD078]
gi|401236618|gb|EJR43075.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD078]
Length = 368
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 188/381 (49%), Gaps = 47/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L+HY +++DV+ L D DF R L + ++V+ +VD DF+GS+
Sbjct: 35 VICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGQSDALVVKIVDIFDFNGSW 86
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V + +V+LV K DL+P S+ + +HW+R A++
Sbjct: 87 LPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAKQL 129
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ K + +SA K G+ L D ++ + +V+ +G N GKST +N + K
Sbjct: 130 GL-KPEDVFLISAAKGQGIAELAD-AIEHYREGKDVYVVGCTNVGKSTFINRMIKEFS-- 185
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
E +N++ T + PGTTL ++ + L + L+DTPG+++ +Q+ + ++
Sbjct: 186 ----DETENVI---TTSHFPGTTLDLIDIP--LDETSSLYDTPGIINHHQMAHYVGKQSL 236
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
KL+ E+KP +++ ++ GL R D + T S L +H K E A
Sbjct: 237 KLITPTTEVKPMVFQLNEEQTLFFGGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKA 294
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ EKH G L PP E+ +E + K+V+ EF++ D+ +GLGW +V G
Sbjct: 295 DELHEKHAGELLNPPTPEE-LENMPKFVKYEFNIR-----EPKTDVVFSGLGWVTVNESG 348
Query: 514 EAALGVWTYEGVDIVLRNALL 534
A + +GV + LR +L+
Sbjct: 349 -AKIVAHVPKGVSVSLRKSLI 368
>gi|222097780|ref|YP_002531837.1| GTP-binding protein yqeh [Bacillus cereus Q1]
gi|221241838|gb|ACM14548.1| GTP-binding protein [Bacillus cereus Q1]
Length = 347
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 189/381 (49%), Gaps = 47/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L+HY +++DV+ L D DF R L + ++V+ +VD DF+GS+
Sbjct: 14 VICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGKSDALVVKIVDIFDFNGSW 65
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V + +V+LV K DL+P S+ + +HW+R A++
Sbjct: 66 LPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAKQL 108
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ K + +SA K G+ L D + G + +V+ +G N GKST +N + K
Sbjct: 109 GL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFINRMIKEFS-- 164
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
E +N++ T + PGTTL ++ + L ++ L+DTPG+++ +Q+ + ++
Sbjct: 165 ----DETENVI---TTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQMAHYVGKQSL 215
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
KL+ KE+KP +++ ++ +GL R D + T S L +H K E A
Sbjct: 216 KLITPTKEIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKA 273
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ + H G L PP E+ +E + + V+ EF++ D+ +GLGW +V G
Sbjct: 274 DELYKNHAGDLLSPPTPEE-LENMPELVKYEFNIR-----EPKTDVVFSGLGWVTVNEPG 327
Query: 514 EAALGVWTYEGVDIVLRNALL 534
A + +GV + LR +L+
Sbjct: 328 -AKIVAHVPKGVSVSLRKSLI 347
>gi|30264407|ref|NP_846784.1| GTP-binding protein YqeH [Bacillus anthracis str. Ames]
gi|42783462|ref|NP_980709.1| GTP-binding protein YqeH [Bacillus cereus ATCC 10987]
gi|47569331|ref|ZP_00240015.1| GTPase of unknown function [Bacillus cereus G9241]
gi|47778309|ref|YP_021207.2| GTP-binding protein YqeH [Bacillus anthracis str. 'Ames Ancestor']
gi|49187229|ref|YP_030481.1| GTP-binding protein YqeH [Bacillus anthracis str. Sterne]
gi|49481394|ref|YP_038389.1| GTP-binding protein YqeH [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52141172|ref|YP_085660.1| GTP-binding protein YqeH [Bacillus cereus E33L]
gi|65321707|ref|ZP_00394666.1| COG1161: Predicted GTPases [Bacillus anthracis str. A2012]
gi|118479501|ref|YP_896652.1| GTP-binding protein YqeH [Bacillus thuringiensis str. Al Hakam]
gi|165873260|ref|ZP_02217870.1| GTPase family protein [Bacillus anthracis str. A0488]
gi|167634670|ref|ZP_02392990.1| GTPase family protein [Bacillus anthracis str. A0442]
gi|167638624|ref|ZP_02396900.1| GTPase family protein [Bacillus anthracis str. A0193]
gi|170687451|ref|ZP_02878668.1| GTPase family protein [Bacillus anthracis str. A0465]
gi|170707440|ref|ZP_02897894.1| GTPase family protein [Bacillus anthracis str. A0389]
gi|177653312|ref|ZP_02935564.1| GTPase family protein [Bacillus anthracis str. A0174]
gi|190567041|ref|ZP_03019957.1| GTPase family protein [Bacillus anthracis str. Tsiankovskii-I]
gi|196034517|ref|ZP_03101926.1| GTPase family protein [Bacillus cereus W]
gi|196039178|ref|ZP_03106484.1| GTPase family protein [Bacillus cereus NVH0597-99]
gi|196044801|ref|ZP_03112035.1| GTPase family protein [Bacillus cereus 03BB108]
gi|206976038|ref|ZP_03236948.1| GTPase family protein [Bacillus cereus H3081.97]
gi|217961825|ref|YP_002340395.1| GTP-binding protein YqeH [Bacillus cereus AH187]
gi|218905472|ref|YP_002453306.1| GTP-binding protein YqeH [Bacillus cereus AH820]
gi|225866316|ref|YP_002751694.1| GTPase family protein [Bacillus cereus 03BB102]
gi|227817112|ref|YP_002817121.1| GTP-binding protein YqeH [Bacillus anthracis str. CDC 684]
gi|228916967|ref|ZP_04080528.1| hypothetical protein bthur0012_41800 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228929380|ref|ZP_04092403.1| hypothetical protein bthur0010_40660 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228935656|ref|ZP_04098470.1| hypothetical protein bthur0009_41020 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228948049|ref|ZP_04110334.1| hypothetical protein bthur0007_41760 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228987588|ref|ZP_04147704.1| hypothetical protein bthur0001_42580 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229093405|ref|ZP_04224510.1| hypothetical protein bcere0021_41310 [Bacillus cereus Rock3-42]
gi|229123874|ref|ZP_04253067.1| hypothetical protein bcere0016_41600 [Bacillus cereus 95/8201]
gi|229141073|ref|ZP_04269615.1| hypothetical protein bcere0013_41670 [Bacillus cereus BDRD-ST26]
gi|229157950|ref|ZP_04286022.1| hypothetical protein bcere0010_41300 [Bacillus cereus ATCC 4342]
gi|229186575|ref|ZP_04313736.1| hypothetical protein bcere0004_41180 [Bacillus cereus BGSC 6E1]
gi|229198463|ref|ZP_04325167.1| hypothetical protein bcere0001_39910 [Bacillus cereus m1293]
gi|229601475|ref|YP_002868625.1| GTP-binding protein YqeH [Bacillus anthracis str. A0248]
gi|254684092|ref|ZP_05147952.1| GTP-binding protein YqeH [Bacillus anthracis str. CNEVA-9066]
gi|254721926|ref|ZP_05183715.1| GTP-binding protein YqeH [Bacillus anthracis str. A1055]
gi|254741477|ref|ZP_05199164.1| GTP-binding protein YqeH [Bacillus anthracis str. Kruger B]
gi|254750916|ref|ZP_05202955.1| GTP-binding protein YqeH [Bacillus anthracis str. Vollum]
gi|254757756|ref|ZP_05209783.1| GTP-binding protein YqeH [Bacillus anthracis str. Australia 94]
gi|300118672|ref|ZP_07056400.1| GTP-binding protein YqeH [Bacillus cereus SJ1]
gi|301055827|ref|YP_003794038.1| GTPase [Bacillus cereus biovar anthracis str. CI]
gi|375286342|ref|YP_005106781.1| GTPase family protein [Bacillus cereus NC7401]
gi|376268233|ref|YP_005120945.1| GTP-binding protein YqeH like protein [Bacillus cereus F837/76]
gi|384182155|ref|YP_005567917.1| GTPase YqeH [Bacillus thuringiensis serovar finitimus YBT-020]
gi|386738225|ref|YP_006211406.1| GTP-binding protein [Bacillus anthracis str. H9401]
gi|402555530|ref|YP_006596801.1| GTPase YqeH [Bacillus cereus FRI-35]
gi|421506589|ref|ZP_15953512.1| GTPase YqeH [Bacillus anthracis str. UR-1]
gi|421638410|ref|ZP_16079006.1| GTPase YqeH [Bacillus anthracis str. BF1]
gi|423354828|ref|ZP_17332453.1| ribosome biogenesis GTPase YqeH [Bacillus cereus IS075]
gi|423373786|ref|ZP_17351125.1| ribosome biogenesis GTPase YqeH [Bacillus cereus AND1407]
gi|423549923|ref|ZP_17526250.1| ribosome biogenesis GTPase YqeH [Bacillus cereus ISP3191]
gi|423570575|ref|ZP_17546820.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-A12]
gi|423573985|ref|ZP_17550104.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-D12]
gi|423604015|ref|ZP_17579908.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD102]
gi|30259065|gb|AAP28270.1| ribosome biogenesis protein GTPase YqeH [Bacillus anthracis str.
Ames]
gi|42739391|gb|AAS43317.1| GTPase family protein [Bacillus cereus ATCC 10987]
gi|47552014|gb|AAT33682.2| GTPase family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|47554002|gb|EAL12369.1| GTPase of unknown function [Bacillus cereus G9241]
gi|49181156|gb|AAT56532.1| GTPase family protein [Bacillus anthracis str. Sterne]
gi|49332950|gb|AAT63596.1| GTP-binding protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|51974641|gb|AAU16191.1| GTP-binding protein [Bacillus cereus E33L]
gi|118418726|gb|ABK87145.1| GTP-binding protein [Bacillus thuringiensis str. Al Hakam]
gi|164711019|gb|EDR16586.1| GTPase family protein [Bacillus anthracis str. A0488]
gi|167513472|gb|EDR88842.1| GTPase family protein [Bacillus anthracis str. A0193]
gi|167530122|gb|EDR92857.1| GTPase family protein [Bacillus anthracis str. A0442]
gi|170127684|gb|EDS96557.1| GTPase family protein [Bacillus anthracis str. A0389]
gi|170668646|gb|EDT19392.1| GTPase family protein [Bacillus anthracis str. A0465]
gi|172081594|gb|EDT66666.1| GTPase family protein [Bacillus anthracis str. A0174]
gi|190562032|gb|EDV16001.1| GTPase family protein [Bacillus anthracis str. Tsiankovskii-I]
gi|195993059|gb|EDX57018.1| GTPase family protein [Bacillus cereus W]
gi|196024289|gb|EDX62962.1| GTPase family protein [Bacillus cereus 03BB108]
gi|196029805|gb|EDX68406.1| GTPase family protein [Bacillus cereus NVH0597-99]
gi|206745790|gb|EDZ57187.1| GTPase family protein [Bacillus cereus H3081.97]
gi|217066660|gb|ACJ80910.1| GTPase family protein [Bacillus cereus AH187]
gi|218536686|gb|ACK89084.1| GTPase family protein [Bacillus cereus AH820]
gi|225786457|gb|ACO26674.1| GTPase family protein [Bacillus cereus 03BB102]
gi|227004029|gb|ACP13772.1| GTPase family protein [Bacillus anthracis str. CDC 684]
gi|228584966|gb|EEK43080.1| hypothetical protein bcere0001_39910 [Bacillus cereus m1293]
gi|228596834|gb|EEK54493.1| hypothetical protein bcere0004_41180 [Bacillus cereus BGSC 6E1]
gi|228625510|gb|EEK82265.1| hypothetical protein bcere0010_41300 [Bacillus cereus ATCC 4342]
gi|228642351|gb|EEK98640.1| hypothetical protein bcere0013_41670 [Bacillus cereus BDRD-ST26]
gi|228659588|gb|EEL15235.1| hypothetical protein bcere0016_41600 [Bacillus cereus 95/8201]
gi|228689999|gb|EEL43802.1| hypothetical protein bcere0021_41310 [Bacillus cereus Rock3-42]
gi|228772129|gb|EEM20579.1| hypothetical protein bthur0001_42580 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228811635|gb|EEM57971.1| hypothetical protein bthur0007_41760 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228824016|gb|EEM69834.1| hypothetical protein bthur0009_41020 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228830286|gb|EEM75900.1| hypothetical protein bthur0010_40660 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228842688|gb|EEM87775.1| hypothetical protein bthur0012_41800 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|229265883|gb|ACQ47520.1| GTPase family protein [Bacillus anthracis str. A0248]
gi|298723921|gb|EFI64635.1| GTP-binding protein YqeH [Bacillus cereus SJ1]
gi|300377996|gb|ADK06900.1| GTPase family protein [Bacillus cereus biovar anthracis str. CI]
gi|324328239|gb|ADY23499.1| GTPase YqeH [Bacillus thuringiensis serovar finitimus YBT-020]
gi|358354869|dbj|BAL20041.1| GTPase family protein [Bacillus cereus NC7401]
gi|364514033|gb|AEW57432.1| GTP-binding protein YqeH like protein [Bacillus cereus F837/76]
gi|384388077|gb|AFH85738.1| GTP-binding protein [Bacillus anthracis str. H9401]
gi|401085832|gb|EJP94066.1| ribosome biogenesis GTPase YqeH [Bacillus cereus IS075]
gi|401095187|gb|EJQ03247.1| ribosome biogenesis GTPase YqeH [Bacillus cereus AND1407]
gi|401189539|gb|EJQ96589.1| ribosome biogenesis GTPase YqeH [Bacillus cereus ISP3191]
gi|401203771|gb|EJR10606.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-A12]
gi|401212554|gb|EJR19297.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-D12]
gi|401245701|gb|EJR52054.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD102]
gi|401796740|gb|AFQ10599.1| GTPase YqeH [Bacillus cereus FRI-35]
gi|401823582|gb|EJT22729.1| GTPase YqeH [Bacillus anthracis str. UR-1]
gi|403394836|gb|EJY92076.1| GTPase YqeH [Bacillus anthracis str. BF1]
Length = 368
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 189/381 (49%), Gaps = 47/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L+HY +++DV+ L D DF R L + ++V+ +VD DF+GS+
Sbjct: 35 VICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGKSDALVVKIVDIFDFNGSW 86
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V + +V+LV K DL+P S+ + +HW+R A++
Sbjct: 87 LPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAKQL 129
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ K + +SA K G+ L D + G + +V+ +G N GKST +N + K
Sbjct: 130 GL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFINRMIKEFS-- 185
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
E +N++ T + PGTTL ++ + L ++ L+DTPG+++ +Q+ + ++
Sbjct: 186 ----DETENVI---TTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQMAHYVGKQSL 236
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
KL+ KE+KP +++ ++ +GL R D + T S L +H K E A
Sbjct: 237 KLITPTKEIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKA 294
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ + H G L PP E+ +E + + V+ EF++ D+ +GLGW +V G
Sbjct: 295 DELYKNHAGDLLSPPTPEE-LENMPELVKYEFNIR-----EPKTDVVFSGLGWVTVNEPG 348
Query: 514 EAALGVWTYEGVDIVLRNALL 534
A + +GV + LR +L+
Sbjct: 349 -AKIVAHVPKGVSVSLRKSLI 368
>gi|417912142|ref|ZP_12555837.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU105]
gi|420187200|ref|ZP_14693221.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM039]
gi|341651153|gb|EGS74958.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU105]
gi|394256179|gb|EJE01112.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM039]
Length = 366
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 203/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q N PGY P N+
Sbjct: 7 CIGCGATLQSENKDAPGYV--PEHNM---------------------------------- 30
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L++Y +V+DV +E+ DF L S + +++ V
Sbjct: 31 ------FREDVICRRCFRLKNYNEVQDVGMES--EDF------LNLLTGLSEKKGIIVNV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GSF + ++V GN +++LV KIDLLP ++ R +
Sbjct: 77 VDVFDFEGSFINAIQRIV----------------GN-KKIILVANKIDLLPKQINHRRVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R+ AR+ G+ + +SA K WG+ L+ + + K +V+ +G N GKSTL+
Sbjct: 120 EWLRKSARKYGLEA-EDVVLISANKGWGIDELLQSINHVRNK-DDVYIVGTTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N K ++ G EK++V T + PGTTL ++ + L ++ +FDTPG++ +Q
Sbjct: 178 N---KLIEQSVG----EKDVV---TTSRFPGTTLDMIDIP--LDEKSFMFDTPGIIQSHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+T ++ E K++ E+K R Y++ ++ GL R+D + + S L
Sbjct: 226 MTNYVSENELKIIIPKNEIKQRVYQLNEKQTLFFGGLARIDYVSGGKRPL--VCFFSNDL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTE A + + G L PP ++ ++ + + DI +G
Sbjct: 284 NIHRTKTEKANDLWKSQLGALLSPP------QDAQQFNLNDVKAVRLETGKTKRDIMISG 337
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LG+ ++ A + V + VD++LRN++L
Sbjct: 338 LGFITI--DAGAKVIVRVPKHVDVILRNSIL 366
>gi|15613886|ref|NP_242189.1| GTP-binding protein YqeH [Bacillus halodurans C-125]
gi|10173939|dbj|BAB05042.1| BH1323 [Bacillus halodurans C-125]
Length = 367
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 190/384 (49%), Gaps = 55/384 (14%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFD---HTVGRKLMSASGARSVVLMVVDAADFD 210
++C RC ++HY +V+DV+ L D DF HT+G + +++++ +VD DF+
Sbjct: 36 IICQRCFRMQHYNEVQDVS----LTDDDFLKILHTIGER-------KALIVKLVDIFDFN 84
Query: 211 GSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRA 270
GS+ + + V GN V+L+ K+DLLP S++ R +W+R+ A
Sbjct: 85 GSWLPGLHRFVG---------------GN--DVLLIGNKVDLLPKSVNRNRMINWMRKSA 127
Query: 271 REDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSV 330
++ G+ I + +S K G+K + ++D K +V+ +GA N GKST +N + +
Sbjct: 128 KDLGLKPI-DVALISGEKGIGVKE-VASLIDRLRKGKDVYVVGATNVGKSTFINKMIQIF 185
Query: 331 DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTR 390
GGD E+ SH PGTTL ++ + L L+DTPG+++ +Q+ + +
Sbjct: 186 ----GGDEEQMITTSHF-----PGTTLDMIDIP--LDDGKTLYDTPGIINHHQMAHYVAK 234
Query: 391 EEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKT 450
E KL+ KE+KP+ +++ ++ GL R D + E + S L +H K
Sbjct: 235 NELKLITPKKEIKPKVFQLNEEQTLFFGGLARFDFVKG--ERTSFVCYVSNDLFIHRTKL 292
Query: 451 ENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVR 510
E A + EK G L PP + + L V+ EF + VD+ +GLGW +V
Sbjct: 293 EKADELYEKRLGDVLTPP---EDPQHLPSLVKHEFTIR-----VQKVDVVISGLGWVTVN 344
Query: 511 LKGEAALGVWTYEGVDIVLRNALL 534
+ + EGV + +R +L+
Sbjct: 345 -GTNVKVCAYAPEGVGVSIRESLI 367
>gi|427440016|ref|ZP_18924545.1| ribosome biogenesis GTPase YqeH [Pediococcus lolii NGRI 0510Q]
gi|425787848|dbj|GAC45333.1| ribosome biogenesis GTPase YqeH [Pediococcus lolii NGRI 0510Q]
Length = 322
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 179/374 (47%), Gaps = 53/374 (14%)
Query: 162 LRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLMVVDAADFDGSFPRKVAKM 220
+RHY ++ V++ D DF RKL+S S + S+V+ VVD DF+GS + +
Sbjct: 1 MRHYNEIAPVSIS----DDDF-----RKLLSQISDSDSLVVYVVDMFDFNGSLIPGLHRF 51
Query: 221 VSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITK 280
V D V+LV K D+ P S+ R W+RQ+A+ +GI +
Sbjct: 52 VGDNP-----------------VLLVGNKADVFPKSIKRHRMREWLRQQAKANGIEPVDV 94
Query: 281 LHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEE 340
+ SA + ++ L D + L R +V+ +G N GKSTL+N++ A R G
Sbjct: 95 M-ITSAKQRPAVEQLFDKIEQLRDGR-DVYVVGVTNVGKSTLINSLI----ALRNG---- 144
Query: 341 KNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINK 400
I +T + PGTTL R+E +K+ DTPG++H +Q+ LT E+ K ++ K
Sbjct: 145 --IKDVITTSRFPGTTLD--RIEIPFDDHSKMIDTPGIVHNDQMAHVLTAEDLKYISPKK 200
Query: 401 ELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKH 460
+KPR Y++ ++ L R D E S+ VT + L +H K NA EKH
Sbjct: 201 TIKPRVYQLGDEQTLFAGALARFDYEHSTGS---VTAYFDNNLMIHRTKLANADHFYEKH 257
Query: 461 FGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVW 520
G L PP E + L + R F + S D+ GLGW +V + + W
Sbjct: 258 AGELLTPPAAEN-LANLPELARHHFKIEEDS------DVVFEGLGWIAV--PAGSVVTAW 308
Query: 521 TYEGVDIVLRNALL 534
+G+ +V+R AL+
Sbjct: 309 APKGISVVIRRALI 322
>gi|296111265|ref|YP_003621647.1| hypothetical protein LKI_05685 [Leuconostoc kimchii IMSNU 11154]
gi|339491463|ref|YP_004705968.1| GTPase YqeH [Leuconostoc sp. C2]
gi|295832797|gb|ADG40678.1| hypothetical protein LKI_05685 [Leuconostoc kimchii IMSNU 11154]
gi|338853135|gb|AEJ31345.1| GTPase YqeH [Leuconostoc sp. C2]
Length = 380
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 197/452 (43%), Gaps = 92/452 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG LMQ ++P+ G+ P L K A +SE
Sbjct: 20 CIGCGALMQVSDPEKAGFL--PMSALKK---------AIDSE------------------ 50
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ C RC LRHY +++ V L D DF + L S R++++ V
Sbjct: 51 ---------ELFCKRCFRLRHYNEIQPVE----LTDADF----AKLLHQISDTRALIVYV 93
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D D GS + + V G +++V K+DLLP L+ R +
Sbjct: 94 IDIFDVTGSEISGLPRFV----------------GQDNPILVVANKVDLLPKLLNKNRLK 137
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+W++ + GI I + SA + L +L+D +D + +V+ +G N GKSTL+
Sbjct: 138 NWLQAELKMQGIKPI-DIFLTSAQRPQNLDNLLD-TIDYFREGRDVYVVGVTNVGKSTLI 195
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K AG G + +T + PGTTL R+E L KL DTPG++ +Q
Sbjct: 196 NQIIK---AGTG-------VQDLITTSRFPGTTLD--RIEIPLADGKKLIDTPGIIKRDQ 243
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L ++ K E+KPRTY++ + +I I GL R D E + VT + L
Sbjct: 244 MAHVLADKDLKFALPKNEIKPRTYQLNSEQTIFIGGLARFDFELG--QRTAVTAYFENNL 301
Query: 444 PLHMGKTENACTMVEKHFGRQLQP-PIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
LH K A +KH G L P P G V+ EF ++ S DI A
Sbjct: 302 NLHRTKLLGADDFYDKHAGGLLAPSPHGTTT-----DLVKHEFSITEDS------DIVFA 350
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW S+ + W +GV +++R A++
Sbjct: 351 GLGWISI--PAGVKVAGWAPKGVSVLIRKAMI 380
>gi|365904269|ref|ZP_09442028.1| GTPase YqeH [Lactobacillus versmoldensis KCTC 3814]
Length = 371
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 211/451 (46%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q NP PGY ++PS +LKK + A++
Sbjct: 10 CIGCGAKIQTNNPDGPGY-VQPS----------------------TLKK-----YLADDS 41
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
K ++C RC LR+Y ++ DV +++ + L S S + +++ V
Sbjct: 42 --------KELLCKRCFRLRNYNEITDVDIDD--------DDFLKLLDSISSQKGLIVNV 85
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD D++GS + + V D +++V K+DLLP S++ +
Sbjct: 86 VDIFDYEGSVIPGLQRFVGD-----------------KNILIVGNKVDLLPHSVNQNKLL 128
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+W++Q+++E+GI + ++ VSA + L+ +++ + +V+ +G N GKSTL+
Sbjct: 129 NWIQQKSKENGIKSVDQI-MVSAQTGTNIDKLMT-MIEKYRQGQDVYVVGTTNTGKSTLI 186
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I + + + K+++ T + PGTTL + + L L DTPG++H Q
Sbjct: 187 NRIISA-------NSDVKDLI---TTSRFPGTTLDQIDIP--LDDGHFLIDTPGIIHKYQ 234
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L +E K + K+L+P T++++ G +I +AGL R D + E V + + L
Sbjct: 235 LAHYLDEKELKAITPKKQLRPSTFQLRDGQTIFVAGLARFDFLD---EKTNVVFYFNQGL 291
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH KT NA +KH G L PP V E K ++EF S DI G
Sbjct: 292 VLHRTKTVNADEFYQKHLGEILNPPYD---VTEFPKLHQEEFTSHRKS------DIVIYG 342
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW V + + V EGV + +R+A++
Sbjct: 343 LGW--VTIPANCKVLVHVPEGVRVAMRDAII 371
>gi|196248991|ref|ZP_03147691.1| Nitric-oxide synthase [Geobacillus sp. G11MC16]
gi|196211867|gb|EDY06626.1| Nitric-oxide synthase [Geobacillus sp. G11MC16]
Length = 369
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 203/451 (45%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q +PK GY KS L E E
Sbjct: 7 CIGCGAAIQFEDPKKAGY----------APKSVL-----------------------EKE 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ +C RC L+HY +V+DV ++ D DF H + R ++++V+ +
Sbjct: 34 TEEI-------ICQRCFRLKHYNEVQDVPLD----DNDFLHMLHR----IGESKALVVYI 78
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + + ++LV K DLLP S+ +
Sbjct: 79 VDIFDFNGSWIPGLPRFAVNNP-----------------ILLVGNKADLLPRSVKYPKLL 121
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R+ A E G+ I + VSA K G+ +++ +D + +V+ +G N GKST +
Sbjct: 122 QWMRRMAEELGLCPI-DVRLVSAAKGIGMTGVME-TIDRYREGRDVYVVGCTNVGKSTFI 179
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K G+G N++ T + PGTTL ++ + L A L+DTPG+++ +Q
Sbjct: 180 NRIIKEA-TGKG------NVI---TTSYFPGTTLDMIEIP--LEGGASLYDTPGIINHHQ 227
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + + K++ +E+ PR Y++ G ++ GL R+D + S + + L
Sbjct: 228 MAHFVDARDLKIITPKREIHPRVYQLNEGQTLFFGGLARLDYVKGGRRSF--VCYVANDL 285
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A ++ G L PP ++ +E V + V +DI +G
Sbjct: 286 TIHRTKLEKADSLYANQLGSLLAPP-SKRYADEFPPLVSRPLSVK-----ERKMDIVFSG 339
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW + G A L V +GVD+ +R +L+
Sbjct: 340 LGWVTCNDPG-AQLVVHAPKGVDVFIRQSLI 369
>gi|209870498|pdb|3EC1|A Chain A, Structure Of Yqeh Gtpase From Geobacillus
Stearothermophilus (An Atnos1 ATNOA1 ORTHOLOG)
gi|209870499|pdb|3EC1|B Chain B, Structure Of Yqeh Gtpase From Geobacillus
Stearothermophilus (An Atnos1 ATNOA1 ORTHOLOG)
Length = 369
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 202/451 (44%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q NPK+ GY
Sbjct: 7 CIGCGAAIQFENPKNAGY----------------------------------------AP 26
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
S ++K + V+C RC L+HY +V+DV ++ D DF + R ++++V+ +
Sbjct: 27 KSVLEKDAEEVICQRCFRLKHYNEVQDVPLD----DDDFLSMLHR----IGESKALVVNI 78
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GSF + + +D ++LV K DLLP S+ +
Sbjct: 79 VDIFDFNGSFIPGLPRFAADNP-----------------ILLVGNKADLLPRSVKYPKLL 121
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R+ A E G+ + + VSA K G+ +++ ++ + G+V+ +G N GKST +
Sbjct: 122 RWMRRMAEELGLCPV-DVCLVSAAKGIGMAKVME-AINRYREGGDVYVVGCTNVGKSTFI 179
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I + G+G N++ T + PGTTL ++ + L + A L+DTPG+++ +Q
Sbjct: 180 NRIIEEA-TGKG------NVI---TTSYFPGTTLDMIEIP--LESGATLYDTPGIINHHQ 227
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + + K++ +E+ PR Y++ G ++ GL R+D + S + + L
Sbjct: 228 MAHFVDARDLKIITPKREIHPRVYQLNEGQTLFFGGLARLDYIKGGRRSF--VCYMANEL 285
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A ++ G L PP ++ E V + V DI +G
Sbjct: 286 TVHRTKLEKADSLYANQLGELLSPP-SKRYAAEFPPLVPRSLSVK-----ERKTDIVFSG 339
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW + G A L V +GVD+ +R +L+
Sbjct: 340 LGWVTCNDPG-AQLVVHAPKGVDVFIRQSLI 369
>gi|229163284|ref|ZP_04291238.1| hypothetical protein bcere0009_40520 [Bacillus cereus R309803]
gi|228620191|gb|EEK77063.1| hypothetical protein bcere0009_40520 [Bacillus cereus R309803]
Length = 368
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 204/451 (45%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q N GY P+ +L K
Sbjct: 7 CIGCGVEIQTENKNEVGY--APTSSLEK-------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L+HY +++DV+ L D DF R L + ++V+ +
Sbjct: 33 --------EQVICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGKSDALVVKI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V + +V+LV K DL+P S+ + +
Sbjct: 77 VDIFDFNGSWLPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
HW+R A++ G+ K + +SA K G+ L D + G + +V+ +G N GKST +
Sbjct: 120 HWMRYSAKQLGL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + K E +N++ T + PGTTL ++ + L ++ L+DTPG+++ +Q
Sbjct: 178 NRMIKEFS------DETENVI---TTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQ 226
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + +E KL+ KE+KP +++ ++ +GL R D + T S L
Sbjct: 227 MAHYVGKESLKLITPTKEIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRL 284
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A + + H G L PP E+ + + + V+ EF++ D+ +G
Sbjct: 285 TIHRTKLEKADELYKNHAGDLLSPPTPEE-LANIPELVKYEFNIR-----EPKTDVVFSG 338
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V G A + +GV + LR +L+
Sbjct: 339 LGWVTVNEPG-AKIVAHVPKGVSVSLRKSLI 368
>gi|126653886|ref|ZP_01725733.1| YqeH [Bacillus sp. B14905]
gi|126589611|gb|EAZ83750.1| YqeH [Bacillus sp. B14905]
Length = 367
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 187/381 (49%), Gaps = 48/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L++Y +++ V+ L D DF R L + +++ +VD DF+GS+
Sbjct: 35 VICQRCFRLKNYNEIQPVS----LTDDDF----LRILNGLGTQQGLIVKIVDIFDFNGSW 86
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V G P V+L+ K DLLP S+ P + +W+++ A+
Sbjct: 87 LPGLHRFV----------------GKNP-VLLIANKADLLPKSVKPKKVINWLKREAKAL 129
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ + L VSA K G+ ++ +D + NV+ +G N GKST +N I K
Sbjct: 130 GLQPVDVL-LVSAHKGKGMAEAME-AIDEYRQGQNVYVVGCTNVGKSTFINRIIKQAT-- 185
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
G+GE +T + PGTTL ++ + L + L+DTPG+++ +Q+ + E
Sbjct: 186 --GEGEV------ITTSHFPGTTLDMIEIP--LDDGSALYDTPGIINHHQMAHHIDSSEL 235
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
K + KE+KP+ Y+ AG ++ I L R D + + T+ + LP+H K E A
Sbjct: 236 KYIMPKKEIKPKVYQQNAGQTLFIGALARFDFIQGDRSAF--TIHVANDLPIHRTKLEKA 293
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ +H G L PP E +++L VR EF S + D+ +GLGW +V+
Sbjct: 294 DMLYAEHKGELLAPPTAE-FIDQLPPLVRHEF-----SIKEAKTDVVFSGLGWITVQ-HA 346
Query: 514 EAALGVWTYEGVDIVLRNALL 534
+ + +GV + +R +L+
Sbjct: 347 NVVVAAYAPKGVQVSIRPSLI 367
>gi|138896098|ref|YP_001126551.1| GTP-binding protein YqeH [Geobacillus thermodenitrificans NG80-2]
gi|134267611|gb|ABO67806.1| GTPase family protein [Geobacillus thermodenitrificans NG80-2]
Length = 371
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 203/451 (45%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q +PK GY KS L E E
Sbjct: 9 CIGCGAAIQFEDPKKAGY----------APKSVL-----------------------EKE 35
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T E+ +C RC L+HY +V+DV ++ D DF H + R ++++V+ +
Sbjct: 36 TEEI-------ICQRCFRLKHYNEVQDVPLD----DNDFLHMLHR----IGESKALVVYI 80
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + + ++LV K DLLP S+ +
Sbjct: 81 VDIFDFNGSWIPGLPRFAVNNP-----------------ILLVGNKADLLPRSVKYPKLL 123
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R+ A E G+ I + VSA K G+ +++ +D + +V+ +G N GKST +
Sbjct: 124 QWMRRMAEELGLRPI-DVRLVSAAKGIGMTGVME-TIDRYREGRDVYVVGCTNVGKSTFI 181
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K G+G N++ T + PGTTL ++ + L A L+DTPG+++ +Q
Sbjct: 182 NRIIKEA-TGKG------NVI---TTSYFPGTTLDMIEIP--LEGGASLYDTPGIINHHQ 229
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + + K++ +E+ PR Y++ G ++ GL R+D + S + + L
Sbjct: 230 MAHFVDARDLKIITPKREIHPRVYQLNEGQTLFFGGLARLDYVKGGRRSF--VCYVANDL 287
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A ++ G L PP ++ +E V + V +DI +G
Sbjct: 288 TIHRTKLEKADSLYANQLGSLLAPP-SKRYADEFPPLVSRPLSVK-----ERKMDIVFSG 341
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW + G A L V +GVD+ +R +L+
Sbjct: 342 LGWVTCNDPG-AQLVVHAPKGVDVFIRQSLI 371
>gi|116333668|ref|YP_795195.1| GTP-binding protein YqeH [Lactobacillus brevis ATCC 367]
gi|116099015|gb|ABJ64164.1| Predicted GTPase [Lactobacillus brevis ATCC 367]
Length = 380
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 195/453 (43%), Gaps = 92/453 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T+P PGY P L+K
Sbjct: 18 CIGCGATIQTTDPTAPGY--TPQSALDK-------------------------------- 43
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
++K E V C RC LRHY ++ V L D DF + L A ++++ V
Sbjct: 44 --GIEKQE--VYCQRCFRLRHYNEIVPVG----LTDDDFLNL----LTQIQDANALIVYV 91
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS + + V D ++LV K DLLP SL ++
Sbjct: 92 VDIFDFNGSVIPGLHRFVGDNP-----------------ILLVGNKEDLLPRSLRRSKLR 134
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQRA E G+ I + +SA N + L+ + G R +V+ +G N GKSTL+
Sbjct: 135 DWLRQRANEAGLRPI-DVTLLSAKTNQSVDGLLQLIDKYRGDR-DVYVVGVTNVGKSTLI 192
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I + + + +T + PGTTL ++E L L DTPG++ Q
Sbjct: 193 NQIIR----------QNTGVKDLITTSKFPGTTLD--KIELPLDDDHVLVDTPGIIQNQQ 240
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ LT ++ K+V K++KP+ Y++ ++ + G+ R D + T + L
Sbjct: 241 MAHFLTGKDLKIVTPQKQVKPKNYQLNDQQTLFLGGVARFDFNKGPKSGF--TAYFENNL 298
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K ENA + G+ L PP + ++ V EF + S D+ G
Sbjct: 299 YIHRTKLENADDFYARQLGQLLTPPQAVDK-DDFPPLVAHEFKTTAKS------DLVFEG 351
Query: 504 LGWFSVRLKGEAALGV--WTYEGVDIVLRNALL 534
LGW +V A + V W GV +++R+A++
Sbjct: 352 LGWITV----PAGINVTGWAPAGVGVLIRHAMI 380
>gi|418412008|ref|ZP_12985274.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
BVS058A4]
gi|410891591|gb|EKS39388.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
BVS058A4]
Length = 366
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 205/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q N + PGY P N+
Sbjct: 7 CIGCGAPLQSENKEAPGYV--PEHNM---------------------------------- 30
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L++Y +V+DV +E+ DF + L S + +++ V
Sbjct: 31 ------FREDVICRRCFRLKNYNEVQDVGMESE----DFLNL----LTGLSEKKGIIVNV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GSF + ++V GN +++LV K+DLLP ++ R +
Sbjct: 77 VDVFDFEGSFINAIQRIV----------------GN-KKIILVANKMDLLPKQINHRRVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R+ AR+ G+ + +SA K WG+ L+ + + K +V+ +G N GKSTL+
Sbjct: 120 EWLRKSARKYGLEA-EDVVLISANKGWGIDELLQSINHVRNK-DDVYIVGTTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N K ++ G EK++V T + PGTTL ++ + L ++ +FDTPG++ +Q
Sbjct: 178 N---KLIEQSVG----EKDVV---TTSRFPGTTLDMIDIP--LDEKSFMFDTPGIIQSHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+T ++ E K++ E+K R Y++ ++ GL R+D + + S L
Sbjct: 226 MTNYVSENELKIIIPKNEIKQRVYQLNEKQTLFFGGLARIDYVSGGKRPL--VCFFSNDL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTE A + + G L PP +E ++ + + DI +G
Sbjct: 284 NIHRTKTEKANDLWKSQLGALLSPP------QEAQQFNLNDVKAVRLETGKTKRDIMISG 337
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LG+ ++ A + V + VD++LRN++L
Sbjct: 338 LGFITI--DAGAKVIVRVPKHVDVILRNSIL 366
>gi|393200248|ref|YP_006462090.1| GTPase [Solibacillus silvestris StLB046]
gi|406667405|ref|ZP_11075163.1| hypothetical protein B857_02989 [Bacillus isronensis B3W22]
gi|327439579|dbj|BAK15944.1| predicted GTPase [Solibacillus silvestris StLB046]
gi|405384773|gb|EKB44214.1| hypothetical protein B857_02989 [Bacillus isronensis B3W22]
Length = 367
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 189/381 (49%), Gaps = 48/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
++C RC L++Y +++ V+ L D DF R L + +++ +VD DF+GS+
Sbjct: 35 IICQRCFRLKNYNEIQPVS----LTDDDFL----RILNGLGQQQGLIVKIVDIFDFNGSW 86
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V GN P V+LV K DLLP S+ + +W+++ A+
Sbjct: 87 LPGLHRFV----------------GNNP-VLLVANKADLLPKSVKEKKVINWLKREAKAL 129
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ K + VSA K G++ +++ + + + +V+ +G N GKST +N I K
Sbjct: 130 GL-KPVDVKLVSAHKGLGMQEVVEAIEEYRNGK-DVYVVGCTNVGKSTFINRIIKQAT-- 185
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
G+GE +T + PGTTL ++ + L + L+DTPG+++ +Q+ + E
Sbjct: 186 --GEGEI------ITTSHFPGTTLDMIGIP--LDDGSSLYDTPGIINHHQMAHHIDSSEL 235
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
K + KE+KP+ Y+ AG ++ I L R D + E TV + LP+H K E A
Sbjct: 236 KYIMPKKEIKPKVYQQNAGQTLFIGALARFDFIQG--ERSAFTVHVANDLPIHRTKLERA 293
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ E+H G L PP K +++L VR EF S D+ +GLGW +V+
Sbjct: 294 DQLYEEHKGELLAPPT-SKHIDQLPPLVRHEF-----SIKEPKTDVVISGLGWVTVQ-HA 346
Query: 514 EAALGVWTYEGVDIVLRNALL 534
+ +GV++ +R +L+
Sbjct: 347 NVVVAAHAPKGVEVFIRPSLI 367
>gi|423558081|ref|ZP_17534383.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MC67]
gi|401191349|gb|EJQ98371.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MC67]
Length = 368
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 187/381 (49%), Gaps = 47/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L+HY +++DV+ L D DF R L + ++V+ +VD DF+GS+
Sbjct: 35 VICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGQSDALVVKIVDIFDFNGSW 86
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V + +V+LV K DL+P S+ + +HW+R A++
Sbjct: 87 LPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAKQL 129
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ K + +SA K G+ L D ++ + +V+ +G N GKST +N + K
Sbjct: 130 GL-KPEDVFLISAAKGQGITELAD-AIEHYREGKDVYVVGCTNVGKSTFINRMIKEFS-- 185
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
E +N++ T + PGTTL ++ + L + L+DTPG+++ +Q+ + ++
Sbjct: 186 ----DETENVI---TTSHFPGTTLDLIDIP--LDETSSLYDTPGIINHHQMAHYVGKQSL 236
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
KL+ E+KP +++ ++ GL R D + T S L +H K E A
Sbjct: 237 KLITPTTEVKPMVFQLNEEQTLFFGGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKA 294
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ E+H G L PP E+ +E + +V+ EF++ D+ +GLGW +V G
Sbjct: 295 DELYERHAGEMLNPPTPEE-LENMPDFVKYEFNIR-----EPKTDVVFSGLGWVTVNESG 348
Query: 514 EAALGVWTYEGVDIVLRNALL 534
A + +GV + LR +L+
Sbjct: 349 -AKIVAHVPKGVSVSLRKSLI 368
>gi|423634841|ref|ZP_17610494.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD156]
gi|401278827|gb|EJR84757.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD156]
Length = 368
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 205/451 (45%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q N GY P+ +L K
Sbjct: 7 CIGCGVEIQTENKNEVGY--APASSLEK-------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L+HY +++DV+ L D DF R L + ++V+ +
Sbjct: 33 --------EQVICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGKSDALVVKI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V + +V+LV K DL+P S+ + +
Sbjct: 77 VDIFDFNGSWLPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
HW+R A++ G+ K + +SA K G+ L + + G + +V+ +G N GKST +
Sbjct: 120 HWMRYSAKQLGL-KPEDVFLISAAKGQGIAELAEAIEYYRGGK-DVYVVGCTNVGKSTFI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + K E +N++ T + PGTTL ++ + L ++ L+DTPG+++ +Q
Sbjct: 178 NRMIKEFS------DETENVI---TTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQ 226
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + ++ KL+ KE+KP +++ ++ +GL R D + T S L
Sbjct: 227 MAHYVGKQSLKLITPTKEIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRL 284
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A + + H G L PP E+ +E + + V+ EF++ D+ +G
Sbjct: 285 TIHRTKLEKADELYKNHAGDLLSPPTPEE-LENMPELVKYEFNIR-----EPKTDVVFSG 338
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V G A + +GV + LR +L+
Sbjct: 339 LGWVTVNEPG-AKIVAHVPKGVSVSLRKSLI 368
>gi|347753133|ref|YP_004860698.1| ribosome biogenesis GTPase YqeH [Bacillus coagulans 36D1]
gi|347585651|gb|AEP01918.1| ribosome biogenesis GTPase YqeH [Bacillus coagulans 36D1]
Length = 368
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 197/454 (43%), Gaps = 96/454 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+Q +P GY P L K
Sbjct: 8 CIGCGALIQTEDPDEAGY--APKSALEK-------------------------------- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L+HY +V+DV L D DF + R ++V+ +
Sbjct: 34 --------EQVICQRCFRLKHYNEVQDVP----LTDDDFLKILNR----LGQVDALVVKI 77
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGK---SGNVPRVVLVVTKIDLLPSSLSPT 260
VD DF+GS W G +G P V+L+ K DLLP S+
Sbjct: 78 VDIFDFNGS-------------------WLPGFHRFAGKNP-VLLIGNKEDLLPKSVKRA 117
Query: 261 RFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKS 320
+ +W++Q+A+E G+ + L VSA K G+ + + + +V+ G N GKS
Sbjct: 118 KMANWMKQQAKELGLRPVDVL-LVSAAKGHGMDEAMAAIEQYRNGK-DVYVAGCTNVGKS 175
Query: 321 TLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLH 380
T +N I R GE++ I T + PGTTL ++ + L L+DTPG+++
Sbjct: 176 TFINRII------RQATGEKEVI----TTSYFPGTTLDMIGIP--LDDGTSLYDTPGIIN 223
Query: 381 PNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWAS 440
+Q+ + + E K++ KE+KP +++ ++ GL R+D + S + S
Sbjct: 224 HHQMAHFVGKNELKVITPKKEIKPTVFQLNEQQTLFFGGLARLDYIKGGRRSF--VCYVS 281
Query: 441 PYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIA 500
L +H K ENA + + G LQPP G+ + VR EF + DI
Sbjct: 282 NALKIHRTKLENADDLYARQLGELLQPP-GKAEAADFPALVRHEFSIK-----EGKTDIV 335
Query: 501 AAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +V G A + + +GV ++LR +L+
Sbjct: 336 FSGLGWVTVNEPG-AVVAAYVPKGVQVMLRQSLI 368
>gi|423452361|ref|ZP_17429214.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5X1-1]
gi|423470557|ref|ZP_17447301.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6O-2]
gi|401139999|gb|EJQ47556.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5X1-1]
gi|402436223|gb|EJV68255.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6O-2]
Length = 368
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 188/381 (49%), Gaps = 47/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L+HY +++DV+ L D DF R L + ++V+ +VD DF+GS+
Sbjct: 35 VICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGQSDALVVKIVDIFDFNGSW 86
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V + +V+LV K DL+P S+ + +HW+R A++
Sbjct: 87 LPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAKQL 129
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ K + +SA K G+ L D ++ + +V+ +G N GKST +N + K
Sbjct: 130 GL-KPEDVFLISAAKGQGITELAD-AIEHYREGKDVYVVGCTNVGKSTFINRMIKEFS-- 185
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
E +N++ T + PGTTL ++ + L + L+DTPG+++ +Q+ + ++
Sbjct: 186 ----DETENVI---TTSHFPGTTLDLIDIP--LDETSSLYDTPGIINHHQMAHYVGKQSL 236
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
KL+ E+KP +++ ++ GL R D + T S L +H K E A
Sbjct: 237 KLITPTTEVKPMVFQLNEEQTLFFGGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKA 294
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ E+H G L PP E+ +E + ++V+ EF++ D+ +GLGW +V G
Sbjct: 295 DELYERHAGELLNPPTPEE-LENMPEFVKYEFNIR-----EPKTDVVFSGLGWVTVNESG 348
Query: 514 EAALGVWTYEGVDIVLRNALL 534
A + +GV + LR +L+
Sbjct: 349 -AKIVAHVPKGVSVSLRKSLI 368
>gi|406027117|ref|YP_006725949.1| GTP-binding protein [Lactobacillus buchneri CD034]
gi|405125606|gb|AFS00367.1| GTP-binding protein [Lactobacillus buchneri CD034]
Length = 378
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 199/451 (44%), Gaps = 87/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T+ GY ES L+ G
Sbjct: 15 CVGCGAAVQTTDKNALGY-------------------TPESALKKGLENG---------- 45
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V C RC LRHY ++ V+ L D DF + L S S S+++ V
Sbjct: 46 ---------EVYCQRCFRLRHYNEIAPVS----LSDDDF----LKLLTSISDTDSLIVYV 88
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD D +GS + + V G+ P V+LV K+D+LP +L + +
Sbjct: 89 VDIFDVNGSLIPGLHRFV----------------GSNP-VLLVGNKLDILPKALKHNKVK 131
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ+A GI I + +SA N+ + L+D + + +V+ +G N GKSTL+
Sbjct: 132 DWLRQQANAAGIRPI-DVELISAKTNFDIDRLLDQIEKYRQGK-DVYVVGVTNVGKSTLI 189
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N+I + + I +T + PGTTL R++ L L DTPG++ P Q
Sbjct: 190 NSIVR----------QSTGIKELITTSRFPGTTLD--RIDIPLNDGHNLVDTPGIIQPEQ 237
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ +E LV K +KP+ Y++ G ++ AG+ R D + TV+A L
Sbjct: 238 MAHHLSGKELNLVTPQKTIKPKGYQLNPGQTLFFAGVARFDYNSGDKRHGF-TVYAENNL 296
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K ENA H G L PP +++ + + E H S+ S D+ G
Sbjct: 297 FIHRTKLENADEFYATHVGSFLTPPTEDQKAD----FPALEPHEFKSTEKS---DLVIEG 349
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V +G + G W +GV +++R A++
Sbjct: 350 LGWVTVP-EGVSVTG-WAPKGVSVLMRPAMI 378
>gi|27468201|ref|NP_764838.1| GTP-binding protein YqeH [Staphylococcus epidermidis ATCC 12228]
gi|57867067|ref|YP_188740.1| GTP-binding protein YqeH [Staphylococcus epidermidis RP62A]
gi|251811013|ref|ZP_04825486.1| GTP-binding protein [Staphylococcus epidermidis BCM-HMP0060]
gi|282875975|ref|ZP_06284842.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis SK135]
gi|293366443|ref|ZP_06613120.1| GTP-binding protein [Staphylococcus epidermidis M23864:W2(grey)]
gi|416125334|ref|ZP_11595932.1| putative GTPase [Staphylococcus epidermidis FRI909]
gi|417656084|ref|ZP_12305775.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU028]
gi|417659637|ref|ZP_12309237.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU045]
gi|417908576|ref|ZP_12552333.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU037]
gi|417913661|ref|ZP_12557324.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU109]
gi|418327846|ref|ZP_12938983.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
14.1.R1.SE]
gi|418605462|ref|ZP_13168786.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU041]
gi|418606028|ref|ZP_13169324.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU057]
gi|418609488|ref|ZP_13172640.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU065]
gi|418612812|ref|ZP_13175836.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU117]
gi|418616314|ref|ZP_13179239.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU120]
gi|418625289|ref|ZP_13187942.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU125]
gi|418626395|ref|ZP_13189007.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU126]
gi|418629354|ref|ZP_13191862.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU127]
gi|418631444|ref|ZP_13193907.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU128]
gi|418665185|ref|ZP_13226635.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU081]
gi|419771845|ref|ZP_14297891.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-K]
gi|420163034|ref|ZP_14669781.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM095]
gi|420167993|ref|ZP_14674645.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM087]
gi|420170303|ref|ZP_14676864.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM070]
gi|420172649|ref|ZP_14679148.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM067]
gi|420183258|ref|ZP_14689391.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM049]
gi|420194894|ref|ZP_14700691.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM021]
gi|420197475|ref|ZP_14703199.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM020]
gi|420199838|ref|ZP_14705508.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM031]
gi|420202364|ref|ZP_14707957.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM018]
gi|420209102|ref|ZP_14714540.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM003]
gi|420211258|ref|ZP_14716632.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM001]
gi|420214056|ref|ZP_14719336.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05005]
gi|420216206|ref|ZP_14721422.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05001]
gi|420220542|ref|ZP_14725501.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH04008]
gi|420221618|ref|ZP_14726545.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH08001]
gi|420225793|ref|ZP_14730620.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH06004]
gi|420227386|ref|ZP_14732155.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05003]
gi|420229700|ref|ZP_14734405.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH04003]
gi|420232111|ref|ZP_14736753.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH051668]
gi|420234758|ref|ZP_14739318.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH051475]
gi|421606909|ref|ZP_16048160.1| GTPase YqeH [Staphylococcus epidermidis AU12-03]
gi|27315747|gb|AAO04882.1|AE016748_116 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|57637725|gb|AAW54513.1| GTP-binding protein, putative [Staphylococcus epidermidis RP62A]
gi|251805523|gb|EES58180.1| GTP-binding protein [Staphylococcus epidermidis BCM-HMP0060]
gi|281295000|gb|EFA87527.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis SK135]
gi|291319212|gb|EFE59581.1| GTP-binding protein [Staphylococcus epidermidis M23864:W2(grey)]
gi|319400931|gb|EFV89150.1| putative GTPase [Staphylococcus epidermidis FRI909]
gi|329735274|gb|EGG71566.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU045]
gi|329737334|gb|EGG73588.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU028]
gi|341654683|gb|EGS78421.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU109]
gi|341655937|gb|EGS79660.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU037]
gi|365232624|gb|EHM73615.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
14.1.R1.SE]
gi|374402351|gb|EHQ73381.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU041]
gi|374407702|gb|EHQ78554.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU065]
gi|374409160|gb|EHQ79960.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU081]
gi|374409467|gb|EHQ80258.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU057]
gi|374817889|gb|EHR82064.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU117]
gi|374821140|gb|EHR85207.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU120]
gi|374825431|gb|EHR89367.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU125]
gi|374832829|gb|EHR96534.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU126]
gi|374834057|gb|EHR97717.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU127]
gi|374835335|gb|EHR98951.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU128]
gi|383360664|gb|EID38059.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-K]
gi|394234723|gb|EJD80297.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM095]
gi|394238021|gb|EJD83507.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM087]
gi|394240641|gb|EJD86064.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM070]
gi|394241810|gb|EJD87219.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM067]
gi|394249721|gb|EJD94934.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM049]
gi|394263954|gb|EJE08675.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM021]
gi|394266282|gb|EJE10928.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM020]
gi|394269772|gb|EJE14302.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM018]
gi|394271245|gb|EJE15741.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM031]
gi|394279330|gb|EJE23638.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM003]
gi|394281711|gb|EJE25937.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM001]
gi|394283978|gb|EJE28139.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05005]
gi|394285895|gb|EJE29961.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH04008]
gi|394290244|gb|EJE34108.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH08001]
gi|394292296|gb|EJE36055.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05001]
gi|394293227|gb|EJE36950.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH06004]
gi|394297192|gb|EJE40801.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05003]
gi|394298994|gb|EJE42549.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH04003]
gi|394301833|gb|EJE45287.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH051668]
gi|394304001|gb|EJE47411.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH051475]
gi|406657378|gb|EKC83766.1| GTPase YqeH [Staphylococcus epidermidis AU12-03]
Length = 366
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 203/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q N PGY P N+
Sbjct: 7 CIGCGAPLQSENKDAPGYV--PEHNM---------------------------------- 30
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L++Y +V+DV +E+ DF L S + +++ V
Sbjct: 31 ------FREDVICRRCFRLKNYNEVQDVGMES--EDF------LNLLTGLSEKKGIIVNV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GSF + ++V GN +++LV KIDLLP ++ R +
Sbjct: 77 VDVFDFEGSFINAIQRIV----------------GN-KKIILVANKIDLLPKQINHRRVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R+ AR+ G+ + +SA K WG+ L+ + + K +V+ +G N GKSTL+
Sbjct: 120 EWLRKSARKYGLEA-EDVVLISANKGWGIDELLQSINHVRNK-DDVYIVGTTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N K ++ G EK++V T + PGTTL ++ + L ++ +FDTPG++ +Q
Sbjct: 178 N---KLIEQSVG----EKDVV---TTSRFPGTTLDMIDIP--LDEKSFMFDTPGIIQSHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+T ++ E K++ E+K R Y++ ++ GL R+D + + S L
Sbjct: 226 MTNYVSENELKIIIPKNEIKQRVYQLNEKQTLFFGGLARIDYVSGGKRPL--VCFFSNDL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTE A + + G L PP ++ ++ + + DI +G
Sbjct: 284 NIHRTKTEKANDLWKSQLGALLSPP------QDAQQFNLNDVKAVRLETGKTKRDIMISG 337
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LG+ ++ A + V + VD++LRN++L
Sbjct: 338 LGFITI--DAGAKVIVRVPKHVDVILRNSIL 366
>gi|420206085|ref|ZP_14711595.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM008]
gi|394277924|gb|EJE22241.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM008]
Length = 366
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 204/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q N PGY P N+
Sbjct: 7 CIGCGAPLQSENKDAPGYV--PEHNM---------------------------------- 30
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L++Y +V+DV +E+ DF + L S + +++ V
Sbjct: 31 ------FREDVICRRCFRLKNYNEVQDVGMESE----DFLNL----LTGLSEKKGIIVNV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GSF + ++V GN +++LV KIDLLP ++ R +
Sbjct: 77 VDVFDFEGSFINAIQRIV----------------GN-KKIILVANKIDLLPKQINHRRVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R+ AR+ G+ + +SA K WG+ L+ + + K +V+ +G N GKSTL+
Sbjct: 120 EWLRKSARKYGLEA-EDVVLISANKGWGIDELLQSINHVRNK-DDVYIVGTTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N K ++ G EK++V T + PGTTL ++ + L ++ +FDTPG++ +Q
Sbjct: 178 N---KLIEQSVG----EKDVV---TTSRFPGTTLDMIDIP--LDEKSFMFDTPGIIQSHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+T ++ E K++ E+K R Y++ ++ GL R+D + + S L
Sbjct: 226 MTNYVSENELKIIIPKNEIKQRVYQLNEKQTLFFGGLARIDYVSGGKRPL--VCFFSNDL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTE A + + G L PP ++ ++ + + DI +G
Sbjct: 284 NIHRTKTEKANDLWKAQLGALLSPP------QDAQQFNLNDVKAVRLETGKTKRDIMISG 337
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LG+ ++ A + V + VD++LRN++L
Sbjct: 338 LGFITI--DAGAKVIVRVPKHVDVILRNSIL 366
>gi|417647043|ref|ZP_12296892.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU144]
gi|329725392|gb|EGG61875.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU144]
Length = 366
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 203/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q N PGY P N+
Sbjct: 7 CIGCGAPLQSENKDAPGYV--PEHNM---------------------------------- 30
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L++Y +V+DV +E+ DF L S + +++ V
Sbjct: 31 ------FREDVICRRCFRLKNYNEVQDVGMES--EDF------LNLLTGLSEKKGIIVNV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GSF + ++V GN +++LV KIDLLP ++ R +
Sbjct: 77 VDVFDFEGSFINAIQRIV----------------GN-KKIILVANKIDLLPKQINHRRVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R+ AR+ G+ + +SA K WG+ L+ + + K +V+ +G N GKSTL+
Sbjct: 120 EWLRKSARKYGLEA-EDVVLISANKGWGIDELLQSINHVRNK-DDVYIVGTTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N K ++ G EK++V T + PGTTL ++ + L ++ +FDTPG++ +Q
Sbjct: 178 N---KLIEQSVG----EKDVV---TTSRFPGTTLDMIDIP--LDEKSFMFDTPGIIQSHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+T ++ E K++ E+K R Y++ ++ GL R+D + + S L
Sbjct: 226 MTNYVSENELKIIIPKNEIKQRVYQLNEKQTLFFGGLARIDYVSGGNRPL--VCFFSNDL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTE A + + G L PP ++ ++ + + DI +G
Sbjct: 284 NIHRTKTEKANDLWKSQLGALLSPP------QDAQQFNLNDVKAVRLETGKTKRDIMISG 337
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LG+ ++ A + V + VD++LRN++L
Sbjct: 338 LGFITI--DAGAKVIVRVPKHVDVILRNSIL 366
>gi|423521806|ref|ZP_17498279.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA4-10]
gi|401176468|gb|EJQ83663.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA4-10]
Length = 368
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 203/451 (45%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q N GY P+ +L K
Sbjct: 7 CIGCGVEIQTENKNEIGY--APASSLEK-------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L+HY +++DV+ L D DF R L + ++V+ +
Sbjct: 33 --------EQVICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGQSDALVVKI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V + +V+LV K DL+P S+ + +
Sbjct: 77 VDIFDFNGSWLPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
HW+R A++ G+ K + +SA K G+ L D ++ + +V+ +G N GKST +
Sbjct: 120 HWMRYSAKQLGL-KPEDVFLISAAKGQGIAELAD-AIEHYREGKDVYVVGCTNVGKSTFI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + K E +N++ T + PGTTL ++ + L + L+DTPG+++ +Q
Sbjct: 178 NRMIKEFS------DETENVI---TTSHFPGTTLDLIDIP--LDETSSLYDTPGIINHHQ 226
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + ++ KL+ E+KP +++ ++ GL R D + T S L
Sbjct: 227 MAHYVGKQSLKLITPTTEVKPMVFQLNEEQTLFFGGLARFDYVSGGRRAF--TCHFSNRL 284
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A + E+H G L PP E+ +E + +V+ EF++ D+ +G
Sbjct: 285 TIHRTKLEKADELYERHAGELLNPPTPEE-LENMPGFVKYEFNIR-----EPKTDVVFSG 338
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V G A + +GV + LR +L+
Sbjct: 339 LGWVTVNESG-AKIVAHVPKGVSVSLRKSLI 368
>gi|75761260|ref|ZP_00741242.1| GTP-binding protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|218899503|ref|YP_002447914.1| GTP-binding protein YqeH [Bacillus cereus G9842]
gi|228902861|ref|ZP_04067004.1| hypothetical protein bthur0014_40310 [Bacillus thuringiensis IBL
4222]
gi|228941502|ref|ZP_04104052.1| hypothetical protein bthur0008_41400 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228967402|ref|ZP_04128435.1| hypothetical protein bthur0004_42030 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228974432|ref|ZP_04135000.1| hypothetical protein bthur0003_41860 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981027|ref|ZP_04141329.1| hypothetical protein bthur0002_41890 [Bacillus thuringiensis Bt407]
gi|384188409|ref|YP_005574305.1| GTP-binding protein YqeH [Bacillus thuringiensis serovar chinensis
CT-43]
gi|402564188|ref|YP_006606912.1| GTPase YqeH [Bacillus thuringiensis HD-771]
gi|410676724|ref|YP_006929095.1| GTP-binding protein [Bacillus thuringiensis Bt407]
gi|423358628|ref|ZP_17336131.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD022]
gi|423385837|ref|ZP_17363093.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1X1-2]
gi|423527806|ref|ZP_17504251.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB1-1]
gi|423561196|ref|ZP_17537472.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-A1]
gi|434377503|ref|YP_006612147.1| GTPase YqeH [Bacillus thuringiensis HD-789]
gi|452200801|ref|YP_007480882.1| GTP-binding protein YqeH [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|74491242|gb|EAO54476.1| GTP-binding protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|218541005|gb|ACK93399.1| GTPase family protein [Bacillus cereus G9842]
gi|228778687|gb|EEM26952.1| hypothetical protein bthur0002_41890 [Bacillus thuringiensis Bt407]
gi|228785268|gb|EEM33279.1| hypothetical protein bthur0003_41860 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228792290|gb|EEM39859.1| hypothetical protein bthur0004_42030 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228818152|gb|EEM64227.1| hypothetical protein bthur0008_41400 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228856785|gb|EEN01302.1| hypothetical protein bthur0014_40310 [Bacillus thuringiensis IBL
4222]
gi|326942118|gb|AEA18014.1| GTP-binding protein YqeH [Bacillus thuringiensis serovar chinensis
CT-43]
gi|401084500|gb|EJP92746.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD022]
gi|401201453|gb|EJR08318.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-A1]
gi|401635893|gb|EJS53648.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1X1-2]
gi|401792840|gb|AFQ18879.1| GTPase YqeH [Bacillus thuringiensis HD-771]
gi|401876060|gb|AFQ28227.1| GTPase YqeH [Bacillus thuringiensis HD-789]
gi|402451469|gb|EJV83288.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB1-1]
gi|409175853|gb|AFV20158.1| GTP-binding protein [Bacillus thuringiensis Bt407]
gi|452106194|gb|AGG03134.1| GTP-binding protein YqeH [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 368
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 194/391 (49%), Gaps = 49/391 (12%)
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
TS ++K + V+C RC L+HY +++DV+ L D DF R L + ++V+ +
Sbjct: 27 TSSLEKEQ--VICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGKSDALVVKI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V + +V+LV K DL+P S+ + +
Sbjct: 77 VDIFDFNGSWLPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
HW+R A++ G+ K + +SA K G+ L D + G + +V+ +G N GKST +
Sbjct: 120 HWMRYSAKQLGL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + K E +N++ T + PGTTL ++ + L ++ L+DTPG+++ +Q
Sbjct: 178 NRMIKEFS------DETENVI---TTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQ 226
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + ++ KL+ KE+KP +++ ++ +GL R D + T S L
Sbjct: 227 MAHYVGKQSLKLITPTKEIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRL 284
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A + + H G L PP E+ + + + V+ EF++ D+ +G
Sbjct: 285 TIHRTKLEKADELYKNHAGDLLSPPTPEE-LANMPELVKYEFNIR-----EPKTDVVFSG 338
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V G A + +GV + LR +L+
Sbjct: 339 LGWVTVNEPG-AKIVAHVPKGVSVSLRKSLI 368
>gi|206969713|ref|ZP_03230667.1| GTPase family protein [Bacillus cereus AH1134]
gi|218233536|ref|YP_002369145.1| GTP-binding protein YqeH [Bacillus cereus B4264]
gi|228954622|ref|ZP_04116646.1| hypothetical protein bthur0006_39910 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228960605|ref|ZP_04122252.1| hypothetical protein bthur0005_40690 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229048042|ref|ZP_04193617.1| hypothetical protein bcere0027_40160 [Bacillus cereus AH676]
gi|229071842|ref|ZP_04205055.1| hypothetical protein bcere0025_40110 [Bacillus cereus F65185]
gi|229081599|ref|ZP_04214095.1| hypothetical protein bcere0023_42300 [Bacillus cereus Rock4-2]
gi|229111809|ref|ZP_04241355.1| hypothetical protein bcere0018_40530 [Bacillus cereus Rock1-15]
gi|229129616|ref|ZP_04258584.1| hypothetical protein bcere0015_40580 [Bacillus cereus BDRD-Cer4]
gi|229146907|ref|ZP_04275271.1| hypothetical protein bcere0012_40460 [Bacillus cereus BDRD-ST24]
gi|229152539|ref|ZP_04280729.1| hypothetical protein bcere0011_40750 [Bacillus cereus m1550]
gi|229180613|ref|ZP_04307954.1| hypothetical protein bcere0005_39570 [Bacillus cereus 172560W]
gi|229192548|ref|ZP_04319509.1| hypothetical protein bcere0002_41990 [Bacillus cereus ATCC 10876]
gi|296504828|ref|YP_003666528.1| GTP-binding protein YqeH [Bacillus thuringiensis BMB171]
gi|365158875|ref|ZP_09355065.1| ribosome biogenesis GTPase YqeH [Bacillus sp. 7_6_55CFAA_CT2]
gi|423411868|ref|ZP_17388988.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3O-2]
gi|423426469|ref|ZP_17403500.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3X2-2]
gi|423432346|ref|ZP_17409350.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4O-1]
gi|423437781|ref|ZP_17414762.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4X12-1]
gi|423502979|ref|ZP_17479571.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HD73]
gi|423585185|ref|ZP_17561272.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD045]
gi|423631058|ref|ZP_17606805.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD154]
gi|423640584|ref|ZP_17616202.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD166]
gi|423650200|ref|ZP_17625770.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD169]
gi|423657291|ref|ZP_17632590.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD200]
gi|449091299|ref|YP_007423740.1| GTPase family protein [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|206735401|gb|EDZ52569.1| GTPase family protein [Bacillus cereus AH1134]
gi|218161493|gb|ACK61485.1| GTPase family protein [Bacillus cereus B4264]
gi|228590855|gb|EEK48713.1| hypothetical protein bcere0002_41990 [Bacillus cereus ATCC 10876]
gi|228602856|gb|EEK60336.1| hypothetical protein bcere0005_39570 [Bacillus cereus 172560W]
gi|228630905|gb|EEK87544.1| hypothetical protein bcere0011_40750 [Bacillus cereus m1550]
gi|228636506|gb|EEK92972.1| hypothetical protein bcere0012_40460 [Bacillus cereus BDRD-ST24]
gi|228653733|gb|EEL09603.1| hypothetical protein bcere0015_40580 [Bacillus cereus BDRD-Cer4]
gi|228671565|gb|EEL26863.1| hypothetical protein bcere0018_40530 [Bacillus cereus Rock1-15]
gi|228701705|gb|EEL54195.1| hypothetical protein bcere0023_42300 [Bacillus cereus Rock4-2]
gi|228711272|gb|EEL63234.1| hypothetical protein bcere0025_40110 [Bacillus cereus F65185]
gi|228723286|gb|EEL74656.1| hypothetical protein bcere0027_40160 [Bacillus cereus AH676]
gi|228799084|gb|EEM46054.1| hypothetical protein bthur0005_40690 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228805068|gb|EEM51663.1| hypothetical protein bthur0006_39910 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|296325880|gb|ADH08808.1| GTP-binding protein YqeH [Bacillus thuringiensis BMB171]
gi|363626245|gb|EHL77242.1| ribosome biogenesis GTPase YqeH [Bacillus sp. 7_6_55CFAA_CT2]
gi|401103936|gb|EJQ11913.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3O-2]
gi|401111216|gb|EJQ19115.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3X2-2]
gi|401117102|gb|EJQ24940.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4O-1]
gi|401120936|gb|EJQ28732.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4X12-1]
gi|401233828|gb|EJR40314.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD045]
gi|401264425|gb|EJR70537.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD154]
gi|401279645|gb|EJR85567.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD166]
gi|401282618|gb|EJR88517.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD169]
gi|401290034|gb|EJR95738.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD200]
gi|402459200|gb|EJV90937.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HD73]
gi|449025056|gb|AGE80219.1| GTPase family protein [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 368
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 204/451 (45%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q N GY P+ +L K
Sbjct: 7 CIGCGVEIQTENKNEVGY--APASSLEK-------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L+HY +++DV+ L D DF R L + ++V+ +
Sbjct: 33 --------EQVICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGKSDALVVKI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V + +V+LV K DL+P S+ + +
Sbjct: 77 VDIFDFNGSWLPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
HW+R A++ G+ K + +SA K G+ L D + G + +V+ +G N GKST +
Sbjct: 120 HWMRYSAKQLGL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + K E +N++ T + PGTTL ++ + L ++ L+DTPG+++ +Q
Sbjct: 178 NRMIKEFS------DETENVI---TTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQ 226
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + ++ KL+ KE+KP +++ ++ +GL R D + T S L
Sbjct: 227 MAHYVGKQSLKLITPTKEIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRL 284
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A + + H G L PP E+ + + + V+ EF++ D+ +G
Sbjct: 285 TIHRTKLEKADELYKNHAGDLLSPPTPEE-LANMPELVKYEFNIR-----EPKTDVVFSG 338
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V G A + +GV + LR +L+
Sbjct: 339 LGWVTVNEPG-AKIVAHVPKGVSVSLRKSLI 368
>gi|170016751|ref|YP_001727670.1| GTP-binding protein YqeH [Leuconostoc citreum KM20]
gi|414596537|ref|ZP_11446111.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE E16]
gi|169803608|gb|ACA82226.1| Predicted GTPase [Leuconostoc citreum KM20]
gi|390482558|emb|CCF28172.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE E16]
Length = 381
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 188/451 (41%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG LMQ T+ GY P L K S
Sbjct: 20 CIGCGALMQVTDANKSGYL--PMSALKKTIDS---------------------------- 49
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
++C RC LRHY +++ V L D DF L S +++++ V
Sbjct: 50 --------DELLCQRCFRLRHYNEIQPVE----LTDDDF----ATLLHQISETKALIVYV 93
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D D GS + + V G +++V K+DLLP L+ R +
Sbjct: 94 IDVFDVTGSEISGLPRFV----------------GQDNPILVVANKVDLLPKLLNKNRLK 137
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+W++ + GI + SA K L L+D V L R +V+ +G N GKSTL+
Sbjct: 138 NWLQAELKAQGIQP-ADIFLTSATKPQNLDDLLDKVDTLRQGR-DVYVVGVTNVGKSTLI 195
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I KS R G + +T + PGTTL R+E L L DTPG++ +Q
Sbjct: 196 NQIIKS----RTG------VTDLITTSRFPGTTLD--RIEIPLADGQFLIDTPGIIKRDQ 243
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
I L + K E+KPRTY++ +I I GL R D E + VT + L
Sbjct: 244 IAHVLDDKNLKYALPKNEIKPRTYQLNPEQTIFIGGLARFDFEAGQRSA--VTAYFENNL 301
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A +KH G L P + L V+ +FH + S DI AG
Sbjct: 302 NLHRTKLLGADDFYQKHVGNLLTPSPTQVTTSTL---VKHQFHTTEKS------DIVFAG 352
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V E + W +GV +++R A++
Sbjct: 353 LGWVTVPAGIEVS--GWAPQGVSVLIRKAMI 381
>gi|242242875|ref|ZP_04797320.1| GTP-binding protein [Staphylococcus epidermidis W23144]
gi|418615653|ref|ZP_13178592.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU118]
gi|418633478|ref|ZP_13195891.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU129]
gi|420174637|ref|ZP_14681086.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM061]
gi|420190211|ref|ZP_14696155.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM037]
gi|420192348|ref|ZP_14698208.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM023]
gi|420204515|ref|ZP_14710073.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM015]
gi|242233650|gb|EES35962.1| GTP-binding protein [Staphylococcus epidermidis W23144]
gi|374816703|gb|EHR80902.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU118]
gi|374839231|gb|EHS02749.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU129]
gi|394244868|gb|EJD90200.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM061]
gi|394259102|gb|EJE03972.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM037]
gi|394261559|gb|EJE06356.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM023]
gi|394273525|gb|EJE17956.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM015]
Length = 366
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 203/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q N PGY P N+
Sbjct: 7 CIGCGAPLQSENKDAPGYV--PEHNM---------------------------------- 30
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L++Y +V+DV +E+ DF L S + +++ V
Sbjct: 31 ------FREDVICRRCFRLKNYNEVQDVGMES--EDF------LNLLTGLSEKKGIIVNV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GSF + ++V GN +++LV KIDLLP ++ R +
Sbjct: 77 VDVFDFEGSFINAIQRIV----------------GN-KKIILVANKIDLLPKQINHRRVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R+ AR+ G+ + +SA K WG+ L+ + + K +V+ +G N GKSTL+
Sbjct: 120 EWLRKSARKYGLEA-EDVVLISANKGWGIDELLQSINHVRNK-DDVYIVGTTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N K ++ G EK++V T + PGTTL ++ + L ++ +FDTPG++ +Q
Sbjct: 178 N---KLIEQSVG----EKDVV---TTSRFPGTTLDMIDIP--LDEKSFMFDTPGIIQSHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+T ++ E K++ E+K R Y++ ++ GL R+D + + S L
Sbjct: 226 MTNYVSENELKIIIPKNEVKQRVYQLNEKQTLFFGGLARIDYVSGGKRPL--VCFFSNDL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTE A + + G L PP ++ ++ + + DI +G
Sbjct: 284 NIHRTKTEKANDLWKSQLGALLSPP------QDAQQFNLNDVKAVRLETGKTKRDIMISG 337
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LG+ ++ A + V + VD++LRN++L
Sbjct: 338 LGFITI--DAGAKVIVRVPKHVDVILRNSIL 366
>gi|421876418|ref|ZP_16307975.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE C10]
gi|372557711|emb|CCF24095.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE C10]
Length = 381
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 188/451 (41%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG LMQ T+ GY P L K S
Sbjct: 20 CIGCGALMQVTDANKSGYL--PMSALKKTIDS---------------------------- 49
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
++C RC LRHY +++ V L D DF L S +++++ V
Sbjct: 50 --------DELLCQRCFRLRHYNEIQPVE----LTDDDF----ATLLHQISETKALIVYV 93
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D D GS + + V G +++V K+DLLP L+ R +
Sbjct: 94 IDVFDVTGSEISGLPRFV----------------GQDNPILVVANKVDLLPKLLNKNRLK 137
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+W++ + GI + SA K L L+D V L R +V+ +G N GKSTL+
Sbjct: 138 NWLQAELKAQGIQP-ADIFLTSATKPQNLDDLLDKVDTLRQGR-DVYVVGVTNVGKSTLI 195
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I KS R G + +T + PGTTL R+E L L DTPG++ +Q
Sbjct: 196 NQIIKS----RTG------VTDLITTSRFPGTTLD--RIEIPLADGQFLIDTPGIIKRDQ 243
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
I L + K E+KPRTY++ +I I GL R D E + VT + L
Sbjct: 244 IAHVLDDKNLKYALPKNEIKPRTYQLNPEQTIFIGGLARFDFEAGQRSA--VTAYFENNL 301
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A +KH G L P + L V+ +FH + S DI AG
Sbjct: 302 NLHRTKLLGADDFYQKHVGNLLAPSPTQVTTSTL---VKHQFHTTEKS------DIVFAG 352
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V E + W +GV +++R A++
Sbjct: 353 LGWVTVPAGIEVS--GWAPQGVSVLIRKAMI 381
>gi|421873989|ref|ZP_16305598.1| ribosome biogenesis GTPase YqeH [Brevibacillus laterosporus GI-9]
gi|372457100|emb|CCF15147.1| ribosome biogenesis GTPase YqeH [Brevibacillus laterosporus GI-9]
Length = 379
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 204/465 (43%), Gaps = 90/465 (19%)
Query: 70 RDGNYDEATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNS 129
R+ N D P C GCGV +Q N PGY P+ L +
Sbjct: 5 REVNQDFEGP--VSCAGCGVEIQTENKAKPGY--APASALKR------------------ 42
Query: 130 LKKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRK 189
+ V+C RC ++HY +V V + D DF R
Sbjct: 43 ----------------------EVVICQRCFRIKHYNEVAPVEMH----DDDFL----RI 72
Query: 190 LMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTK 249
L + +V+MVVD DF GS+ R + + V ++LV K
Sbjct: 73 LNGIGSTKCLVVMVVDLFDFQGSWLRGLPRFVGQNP-----------------ILLVGNK 115
Query: 250 IDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNV 309
+DLLP +++ R ++W++ A+E G+ K ++ VSA K G+ L+ + + R +V
Sbjct: 116 VDLLPRNINLNRVKNWIQHEAKERGL-KPNEVVLVSAEKGTGIDELLARIGEFRKGR-DV 173
Query: 310 WAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQ 369
+ +G N GKSTL+N I A D E +T +P PGTTL ++E L
Sbjct: 174 YIVGVTNVGKSTLINRILHDYGAA---DME-------ITTSPFPGTTLD--KIEIPLEDG 221
Query: 370 AKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESS 429
+FDTPG+++ +QI ++ E+ + + + PR +++ ++ GL R+D
Sbjct: 222 RSIFDTPGIINRDQIGHLVSPEDLRKLTPKSRINPRVFQLNDKQTLFFGGLARVDYVRGE 281
Query: 430 VESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSG 489
+ + + L +H K +NA ++EKH G L PP GE + L + R +
Sbjct: 282 RQPF--ACYLANDLYIHRTKLDNAEEVLEKHHGEMLAPPSGEA-AKALLPFTRYTLKID- 337
Query: 490 SSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+ DI AGLGW +++ K + + V +GV + LR L+
Sbjct: 338 ---TNGPTDIVIAGLGWIALQGKVKGVVEVHVPKGVSVGLRKGLI 379
>gi|406670355|ref|ZP_11077607.1| ribosome biogenesis GTPase YqeH [Facklamia ignava CCUG 37419]
gi|405579662|gb|EKB53757.1| ribosome biogenesis GTPase YqeH [Facklamia ignava CCUG 37419]
Length = 369
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 210/457 (45%), Gaps = 89/457 (19%)
Query: 78 TPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVV 137
T ++ C GCG +Q +P+ GY P+ L K GLV
Sbjct: 2 TNEVYQCIGCGATIQTEDPEGLGYL--PASALAK----------------------GLV- 36
Query: 138 FEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR 197
++ C RC+ LRHY ++ D+ ++ L ++L S +
Sbjct: 37 -------------QESFYCQRCYRLRHYNELIDLALDEDL--------FLQRLSSIASDD 75
Query: 198 SVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSL 257
+ V++VVD D +GS + +++ G P V V K DLLP
Sbjct: 76 AFVILVVDVFDVEGSIISGIQRLI----------------GEQPFAV-AVNKFDLLPKVT 118
Query: 258 SPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNA 317
++ + WVRQ + + + + + +K G+++L++ +++ N++ +G N
Sbjct: 119 RQSKVKEWVRQIMNSNHLYPESVI-ITNGMKRSGIEALVE-LIEQYIHSKNIYIVGITNV 176
Query: 318 GKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPG 377
GKSTL+N + + G E+ I+ T + PGTTL ++++ L + L DTPG
Sbjct: 177 GKSTLINQLIQHY-------GGEREII---TTSNHPGTTLDMIQIP--LTDEHSLIDTPG 224
Query: 378 LLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTV 437
++ +Q L+R+E K V +K LKP+TY++K+ ++ + GL R+DV ++ + VT+
Sbjct: 225 IIKKSQYAHYLSRDELKEVLPSKPLKPKTYQLKSEQTLFLGGLARIDV-KTQADKAAVTL 283
Query: 438 WASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSV 497
+ + L +H KTE A EKH G L PP ++ EL + + +SG
Sbjct: 284 YVNSSLYIHRTKTEKASDFYEKHLGELLNPPHQKEDFPELKA---QSYRLSGKE------ 334
Query: 498 DIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
D+ +GLGW + L VW G+ + R +++
Sbjct: 335 DLNISGLGWITS--NAPVNLTVWVPRGIAVTKRPSII 369
>gi|339010606|ref|ZP_08643176.1| GTP binding protein [Brevibacillus laterosporus LMG 15441]
gi|338772761|gb|EGP32294.1| GTP binding protein [Brevibacillus laterosporus LMG 15441]
Length = 379
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 197/451 (43%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q N PGY P+ L +
Sbjct: 17 CAGCGVEIQTENKAKPGY--APASALKR-------------------------------- 42
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC ++HY +V V + D DF R L + +V+MV
Sbjct: 43 --------EVVICQRCFRIKHYNEVAPVEMH----DDDFL----RILNGIGSTKCLVVMV 86
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF GS+ R + + V ++LV K+DLLP +++ R +
Sbjct: 87 VDLFDFQGSWLRGLPRFVGQNP-----------------ILLVGNKVDLLPRNINLNRVK 129
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+W++ A+E G+ K ++ VSA K G+ L+ + + R +V+ +G N GKSTL+
Sbjct: 130 NWIQHEAKERGL-KPNEVVLVSAEKGIGIDELLARIGEFRKGR-DVYIVGVTNVGKSTLI 187
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I A +T +P PGTTL ++E L +FDTPG+++ +Q
Sbjct: 188 NRILHDYGAAD----------MEITTSPFPGTTLD--KIEIPLEDGRSIFDTPGIINRDQ 235
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
I ++ E+ + + + PR +++ ++ GL R+D + + + L
Sbjct: 236 IGHLVSPEDLRKLTPKSRINPRVFQLNDKQTLFFGGLARVDYVRGERQPF--ACYLANDL 293
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K +NA ++EKH G L PP GE + L + R + + DI AG
Sbjct: 294 YIHRTKLDNAEEVLEKHHGEMLAPPSGEA-AKALLPFTRYTLKID----TNGPTDIVIAG 348
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +++ K + + V +GV + LR L+
Sbjct: 349 LGWIALQGKVKGVVEVHVPKGVSVGLRKGLI 379
>gi|421879139|ref|ZP_16310612.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE C11]
gi|390446938|emb|CCF26732.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE C11]
Length = 381
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 188/451 (41%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG LMQ T+ GY P L K S
Sbjct: 20 CIGCGALMQVTDANKSGYL--PMSALKKTIDS---------------------------- 49
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
++C RC LRHY +++ V L D DF L S +++++ V
Sbjct: 50 --------DELLCQRCFRLRHYNEIQPVE----LTDDDF----ATLLHQISETKALIVYV 93
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D D GS + + V G +++V K+DLLP L+ R +
Sbjct: 94 IDVFDVTGSEISGLPRFV----------------GQDNPILVVANKVDLLPKLLNKNRLK 137
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+W++ + GI + SA K L L+D V L R +V+ +G N GKSTL+
Sbjct: 138 NWLQADLKAQGIQP-ADIFLTSATKPQNLDDLLDKVDTLRQGR-DVYVVGVTNVGKSTLI 195
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I KS R G + +T + PGTTL R+E L L DTPG++ +Q
Sbjct: 196 NQIIKS----RTG------VTDLITTSRFPGTTLD--RIEIPLADGQFLIDTPGIIKRDQ 243
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
I L + K E+KPRTY++ +I I GL R D E + VT + L
Sbjct: 244 IAHVLDDKNLKYALPKNEIKPRTYQLNPEQTIFIGGLARFDFEAGQRSA--VTAYFENNL 301
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A +KH G L P + L V+ +FH + S DI AG
Sbjct: 302 NLHRTKLLGADDFYQKHVGNLLTPSPTQVTTSTL---VKHQFHTTEKS------DIVFAG 352
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V E + W +GV +++R A++
Sbjct: 353 LGWVTVPAGIEVS--GWAPQGVSVLIRKAMI 381
>gi|256850837|ref|ZP_05556226.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 27-2-CHN]
gi|260661048|ref|ZP_05861962.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 115-3-CHN]
gi|297205711|ref|ZP_06923106.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii JV-V16]
gi|256615899|gb|EEU21087.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 27-2-CHN]
gi|260547985|gb|EEX23961.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 115-3-CHN]
gi|297148837|gb|EFH29135.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii JV-V16]
Length = 369
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 127/453 (28%), Positives = 202/453 (44%), Gaps = 92/453 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q + G+ P+ LNK E EN+
Sbjct: 7 CIGCGAVLQSQDENEAGFL--PASALNKA-------------------------LEGENQ 39
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V C RC LRHY ++ V + N DF R L S +++++ V
Sbjct: 40 E---------VYCKRCFRLRHYSEIMPVELNN--DDF------LRLLNSLGDKKALIVNV 82
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+ S + + V + +LV K+DL P + ++ +
Sbjct: 83 VDLFDFNNSLIPSLKRFVGNN-----------------DFILVGNKVDLFPLNSKESKIK 125
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ A G+ + +SA K L+ LI +D A + +V+ +G N GKSTL+
Sbjct: 126 DWMRQEANRMGLYP-KDIFLISAAKKRNLQDLIA-YLDRASQNQDVYFVGTTNVGKSTLI 183
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N+I + G+ K+++ T + PGTTL +++ L + L DTPG++ Q
Sbjct: 184 NSIIDLM-------GDVKDLI---TTSRFPGTTLDQIKIP--LDSGHYLVDTPGIMTDKQ 231
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + L ++ L+ K LKP TY++ +G ++ + GL R+D S E TV+ + L
Sbjct: 232 LASYLNSKDLDLIAPKKPLKPATYQLNSGQTLFLGGLGRIDF--VSGEKTSFTVYTARGL 289
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTENA EKH G L PP G+ E L + +H + S D+ G
Sbjct: 290 YVHRTKTENADEFYEKHVGDLLTPPHGD---ENLPAMKGQTYHPTTKS------DLLFGG 340
Query: 504 LGWFSVRLKGEAALGVWTY--EGVDIVLRNALL 534
+G+ +V A + V TY G+ +R AL+
Sbjct: 341 IGFITV----PAGVVVKTYLPGGIGQGIRRALI 369
>gi|452994694|emb|CCQ93697.1| GTPase involved in ribosome 30S assembly [Clostridium ultunense
Esp]
Length = 385
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 201/452 (44%), Gaps = 88/452 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
VCPGCG +Q + PGY +H + E
Sbjct: 22 VCPGCGAPLQSEDKNLPGYLP--------------IHAWEKEE----------------- 50
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
VC RC ++HY + V L + DF L S ++V+
Sbjct: 51 -----------AVCLRCFRIKHYNEAVQVD----LREEDFLQV----LHSIGSTEALVVH 91
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
+VD D +G+ + + + +LV K+DLLP ++ R
Sbjct: 92 LVDLIDVNGTLLSGLHRFIGQNP-----------------FLLVGNKLDLLPQRVNLDRI 134
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ ARE G+ K + +SA+K L+ L++ + + K NV+ IGA N GKST
Sbjct: 135 RRWLLMMAREWGL-KPVDVMLISALKGSYLQELLEKL-EAYRKGKNVYFIGATNVGKSTF 192
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N + K GE+ I +T + PGTTL ++ + + + +DTPG++ P+
Sbjct: 193 MNRLLKEY-------GEKGTI--EITTSRFPGTTLDLIEIP--VDEHSSFYDTPGVMTPH 241
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
QI L+ E+ K V K + P+ Y+++ ++ + G+ R+D + +S V+ S
Sbjct: 242 QIIRYLSPEDLKKVIPQKRINPKVYQLEPEQTLFLGGMARIDFISGTPQSF--IVYISNE 299
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+P+H K +A + EKH G L PP G++ ++ L WV+ F++ + DIA +
Sbjct: 300 IPVHRTKRSHAGELQEKHRGELLSPP-GKENLDRLPPWVKHSFNLK----EGEKQDIAIS 354
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW S K + + V+ +GV + +R ++
Sbjct: 355 GLGWVSFSGK-KGRVDVFAPKGVSVQIRKGMI 385
>gi|375089692|ref|ZP_09736017.1| ribosome biogenesis GTPase YqeH [Facklamia languida CCUG 37842]
gi|374566539|gb|EHR37778.1| ribosome biogenesis GTPase YqeH [Facklamia languida CCUG 37842]
Length = 380
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 203/456 (44%), Gaps = 98/456 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY ES F +++ G
Sbjct: 18 CIGCGAMIQWEDPDRAGYL-------------------PESAFKKGIEEDGFY------- 51
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTV-ENLLPDFDFDHTVGRKLMSASGARSVVLM 202
C RC LRHY ++ V V E + D L S + ++V+
Sbjct: 52 ------------CQRCFRLRHYNELHPVEVSEEVFRD---------HLSSLADEEALVVK 90
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD D +GS ++++ G P VV V K+DLLP S+ R
Sbjct: 91 VVDIFDVEGSLISGFSRII----------------GKQPFVV-VANKMDLLPKSVKANRV 133
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+HW+++ RE+G+ +++ +SA K L L D ++ A K NV+ +G N GKSTL
Sbjct: 134 KHWLKECLRENGLIA-SEILLLSAHKESTLHPLFD-LIKTALKTKNVYLVGVTNVGKSTL 191
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPA--QAKLFDTPGLLH 380
+N + + G E+ ++ T + PGTTL + V+P Q + DTPG++
Sbjct: 192 MNQLIRHF-------GGEQGVI---TTSNHPGTTLDKI----VIPVTDQTAIIDTPGIIQ 237
Query: 381 PNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWAS 440
+Q+ L R K + +K +KP+T+++ ++ +AGL ++D S T +AS
Sbjct: 238 SHQLAHYLDRRGVKNILPSKRIKPKTFQLNPEQTLFLAGLAQIDFLAGDKTSF--TCYAS 295
Query: 441 PYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVE--ELGKWVRKEFHVSGSSWDSSSVD 498
L LH K A + KH G L PP ++ VE E+ ++ + + + D
Sbjct: 296 NDLYLHRSKLAGASDFLSKHQGDLLSPPYTDQLVEFPEM---------IAHTVFLEPNQD 346
Query: 499 IAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+A +GLGW V K L VW +G+ +R AL+
Sbjct: 347 LAISGLGWICVNQK--VQLKVWIPKGIHFSIRQALI 380
>gi|423395365|ref|ZP_17372566.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-1]
gi|423406240|ref|ZP_17383389.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-3]
gi|401654776|gb|EJS72315.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-1]
gi|401660234|gb|EJS77716.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-3]
Length = 368
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 203/451 (45%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q N GY P+ +L K
Sbjct: 7 CIGCGVEIQTENKNEVGY--APTSSLEK-------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L+HY +++DV+ L D DF R L + ++V+ +
Sbjct: 33 --------EQVICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGKSDALVVKI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V + +V+LV K DL+P S+ + +
Sbjct: 77 VDIFDFNGSWLPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKDDKVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
HW+R A++ G+ K + +SA K G+ L D ++ +V+ +G N GKST +
Sbjct: 120 HWMRYSAKQLGL-KPEDVFLISAAKGQGIAELAD-AIEYYRDGKDVYVVGCTNVGKSTFI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + K E +N++ T + PGTTL ++ + L ++ L+DTPG+++ +Q
Sbjct: 178 NRMIKEFS------DETENVI---TTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQ 226
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + ++ KL+ KE+KP +++ ++ +GL R D + T S L
Sbjct: 227 MAHYVGKQSLKLITPTKEIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRL 284
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A + + H G L PP E+ + + + V+ EF++ D+ +G
Sbjct: 285 TIHRTKLEKADELYKNHAGDLLSPPTPEE-LANMPELVKYEFNIR-----EPKTDVVFSG 338
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V G A + +GV + LR +L+
Sbjct: 339 LGWVTVNEPG-AKIVAHVPKGVSVSLRKSLI 368
>gi|402300001|ref|ZP_10819554.1| GTPase YqeH [Bacillus alcalophilus ATCC 27647]
gi|401724792|gb|EJS98121.1| GTPase YqeH [Bacillus alcalophilus ATCC 27647]
Length = 371
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 196/382 (51%), Gaps = 49/382 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLMVVDAADFDGS 212
V+C RC L+HY +V+DV+ L D DF K+++ G + ++++ +VD DF+GS
Sbjct: 36 VICQRCFRLKHYNEVQDVS----LTDDDF-----LKILNTLGEKDALIVKIVDVFDFNGS 86
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + + + V GK+ V+LV K+DLLP S + +W+++ A+E
Sbjct: 87 WLQGLHRFV-------------GKND----VLLVANKVDLLPKSFKRNKLINWLKKSAKE 129
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + + +SA K + I +D + +V+ +GA N GKST +N + ++ D
Sbjct: 130 LGLRPV-DVCLMSAAKGESVIE-IAATIDKLRQGKDVYIVGATNVGKSTFINKMIQAFD- 186
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
GD E+ SH PGTTL ++ + L L+DTPG+++ +Q+ + ++E
Sbjct: 187 ---GDEEQLITTSHF-----PGTTLDMIDIP--LDDGRTLYDTPGIINHHQMAHYIDKKE 236
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
KL+ KE+KP ++ G ++ GL R+D ++ S +V+ +++ L +H K E
Sbjct: 237 LKLITPKKEIKPIVNQLNEGQALFFGGLARLDFKQGE-RSSFVSYFSNE-LQIHRTKVEK 294
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A + H G L PP G K E+ V+K+F + VD+ +GLG+ ++
Sbjct: 295 ADQLYANHLGELLAPP-GPKSKEDFPPLVKKDFRIK-----DKKVDLVFSGLGFVTIN-G 347
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
+ +GV + +R++++
Sbjct: 348 TNLDIAAHVPKGVTVSIRDSII 369
>gi|227877772|ref|ZP_03995805.1| GTP-binding protein [Lactobacillus crispatus JV-V01]
gi|256843623|ref|ZP_05549111.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus 125-2-CHN]
gi|256850099|ref|ZP_05555529.1| GTP-binding protein YqeH [Lactobacillus crispatus MV-1A-US]
gi|262047387|ref|ZP_06020344.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus MV-3A-US]
gi|293380732|ref|ZP_06626780.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus 214-1]
gi|423319186|ref|ZP_17297062.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus FB049-03]
gi|423320732|ref|ZP_17298604.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus FB077-07]
gi|227862631|gb|EEJ70117.1| GTP-binding protein [Lactobacillus crispatus JV-V01]
gi|256615043|gb|EEU20244.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus 125-2-CHN]
gi|256713071|gb|EEU28062.1| GTP-binding protein YqeH [Lactobacillus crispatus MV-1A-US]
gi|260572361|gb|EEX28924.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus MV-3A-US]
gi|290922696|gb|EFD99650.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus 214-1]
gi|405589995|gb|EKB63534.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus FB049-03]
gi|405600001|gb|EKB73174.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus FB077-07]
Length = 369
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/453 (28%), Positives = 206/453 (45%), Gaps = 90/453 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q +P+ GY P L+K + + EN
Sbjct: 6 ICIGCGAKLQSDDPEKAGYL--PKSALDKAK-------------------------QEEN 38
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDF-DFDHTVGRKLMSASGARSVVL 201
V C RC LRHY ++ V + N DF +++G+K +++++
Sbjct: 39 AD---------VYCQRCFRLRHYNEIMPVDLNN--DDFLALLNSLGQK-------KALIV 80
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
VVD DF S + + V + +LV K DL P + ++
Sbjct: 81 NVVDLFDFSNSLLSSLKRFVGNN-----------------DFILVGNKFDLFPKNSKQSK 123
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
+ W+RQ A G+ ++ VSA K L+ LI ++ + +V+ +G N GKST
Sbjct: 124 IKDWMRQEANRMGLYP-KEIFLVSAKKKLNLEDLIA-YINKQSQDKDVYFVGTTNVGKST 181
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
L+NAI + GD I +T + PGTTL ++E L L DTPG++
Sbjct: 182 LINAIIDMM-----GD-----IQDLITASRFPGTTLD--KIEIPLENGHFLIDTPGIMTE 229
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
NQ+ T L ++ +LV+ K LKP TY++ G+++ +AGL R+D + ES TV+ +
Sbjct: 230 NQLATHLNAKDLELVSPKKPLKPATYQLLPGNTLFLAGLGRIDYLKG--ESTSFTVYVAR 287
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
+ +H KT NA +KH G L PP + +E+ +EF S D+
Sbjct: 288 GMYIHRTKTANADDFYKKHKGELLSPPAAD---DEMAPLKGQEFRTEYKS------DLLF 338
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
G+G+ +V KG + +T +G+ + +R AL+
Sbjct: 339 GGIGFVTVP-KG-CVVKTYTPDGIGLGIRRALI 369
>gi|395238195|ref|ZP_10416133.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gigeriorum CRBIP
24.85]
gi|394477899|emb|CCI86110.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gigeriorum CRBIP
24.85]
Length = 369
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 191/427 (44%), Gaps = 86/427 (20%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q +P G+ P+ LNK EAE+
Sbjct: 6 ICIGCGAKLQAEDPNKAGFL--PTSALNKA-------------------------IEAED 38
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
+ V C RC LRHY ++ V + N DF L S + +++++
Sbjct: 39 QE---------VYCQRCFRLRHYNEIMPVDLNN--DDF------LALLNSLAEKKALIVN 81
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF S + + V + + +LV K DL P + ++
Sbjct: 82 VVDLFDFSNSLLSSLKRFVGNN-----------------KFILVGNKFDLFPKNSRQSKI 124
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+RQ A G+ K+ +SA + L LI+ ++ + +++ +G N GKSTL
Sbjct: 125 KDWMRQEANRMGLYP-EKIFLISAARQKFLDELIE-YLNANSQDQDIYFVGMTNVGKSTL 182
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + G+ K+++ T + PGTTL R+E L L DTPG++ N
Sbjct: 183 INAIIDKM-------GDIKDLI---TTSRFPGTTLD--RIEIPLDNGHYLVDTPGIMTEN 230
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L ++ LV+ K LKP TY++ G+++ + GL R+D + ES TV+A
Sbjct: 231 QLVAHLDPKDLALVSPKKPLKPATYQLLPGNTLFLGGLGRIDYLKG--ESTSFTVYAPRE 288
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+ +H K NA KH G L PP+ K + EL +EFH + S D+
Sbjct: 289 VYVHRTKVSNADEFYRKHNGEMLTPPVASKDLPELKG---QEFHTTYKS------DLLFG 339
Query: 503 GLGWFSV 509
G+G+ +V
Sbjct: 340 GIGFITV 346
>gi|336114443|ref|YP_004569210.1| nitric-oxide synthase [Bacillus coagulans 2-6]
gi|335367873|gb|AEH53824.1| Nitric-oxide synthase [Bacillus coagulans 2-6]
Length = 368
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 194/418 (46%), Gaps = 57/418 (13%)
Query: 123 ESEFSNSLKKGGLVVFEAENETSEVKK---HEKPVVCARCHALRHYGKVKDVTVENLLPD 179
E E + + G L+ E +E K ++ V+C RC L+HY +V+DV L D
Sbjct: 2 EKEAVHCIGCGALIQTEDPDEAGYAPKSALEKEQVICQRCFRLKHYNEVQDVP----LTD 57
Query: 180 FDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGK--- 236
DF + R ++V+ +VD DF+GS W G
Sbjct: 58 DDFLKILNR----LGQVDALVVKIVDIFDFNGS-------------------WLPGFHRF 94
Query: 237 SGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLI 296
+G P V+L+ K DLLP S+ + +W++Q+A+E G+ L VSA K G+ +
Sbjct: 95 AGKNP-VLLIGNKEDLLPKSVKRAKMANWMKQQAKELGLRPADVL-LVSAAKGHGMDEAM 152
Query: 297 DDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTT 356
+ + +V+ G N GKST +N I + EK+++ T + PGTT
Sbjct: 153 AAIEQYRNGK-DVYVAGCTNVGKSTFINRIIRQATG-------EKDVI---TTSYFPGTT 201
Query: 357 LGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIH 416
L ++ + L L+DTPG+++ +Q+ + + E K++ KE+KP +++ ++
Sbjct: 202 LDMIGIP--LDDGTSLYDTPGIINHHQMAHFVGKNELKVITPKKEIKPAVFQLNERQTLF 259
Query: 417 IAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEE 476
GL R+D + S + S L +H K ENA + + G LQPP G+ +
Sbjct: 260 FGGLARLDYIKGGRRSF--VCYVSNALKIHRTKLENADDLYARQLGELLQPP-GKAEAAD 316
Query: 477 LGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
VR EF + DI +GLGW +V G A + + +GV ++LR +L+
Sbjct: 317 FPALVRHEFSIK-----EGKTDIVFSGLGWVTVNEPG-AVVAAYVPKGVRVMLRRSLI 368
>gi|253574707|ref|ZP_04852047.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. oral taxon 786
str. D14]
gi|251845753|gb|EES73761.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. oral taxon 786
str. D14]
Length = 375
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 206/452 (45%), Gaps = 90/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q + PGY P Q L+K
Sbjct: 13 CSGCGAVLQTQDSSKPGYV--PEQALSK-------------------------------- 38
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
+PV+C RC +++Y + VTVE D + +L+S G++ ++V+
Sbjct: 39 --------EPVICQRCFRIKNYNESSSVTVEQ-------DEFL--RLLSQIGSKEALVIH 81
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
+VD DF GS + + V GN P V+L V K DLLP + +
Sbjct: 82 IVDLFDFHGSVITGLQRFV----------------GNNP-VLLAVNKTDLLPKVTNWNKV 124
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+WV++ A++ G+ KI + SA +N G L+D V G R +V+ +GA N GKSTL
Sbjct: 125 RNWVQKEAKDLGL-KIEDVVLCSAKQNSGFDRLLDAVAARRGDR-DVYVVGATNVGKSTL 182
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N + + + ++ LT + PGTTL +V + L + DTPG+++P+
Sbjct: 183 INRLIR----------DYSDLDQELTVSRYPGTTLDMVHIP--LDDGRAIIDTPGIVYPS 230
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
+ + + + ++ +K LKP Y++ G ++ G R D + +S T + +
Sbjct: 231 RYSELVAPSDLGVIMPDKPLKPAVYQLNEGQTLFFGGFGRFDFIQGERQSF--TCFVNIR 288
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+P+H K A + +H G L PP ++ +E L +W R EF + S D+ +
Sbjct: 289 VPIHRTKLARADELFTEHAGELLSPP-SKEHIEALPEWTRHEFRIP----KGSRSDVFIS 343
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW + A + + +GV +++R +L+
Sbjct: 344 GLGWIKINNDAGAVVAMHVPKGVKVLVRPSLI 375
>gi|377556235|ref|ZP_09785950.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gastricus PS3]
gi|376168658|gb|EHS87406.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gastricus PS3]
Length = 372
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 199/451 (44%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY P+ + K L+ G L
Sbjct: 10 CIGCGAVIQSDHPDELGY--TPASAVQK-----------------GLESGELY------- 43
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
C RC LRHY ++ V+ L D DF R L +S+++ V
Sbjct: 44 ------------CQRCFRLRHYNEIAPVS----LTDDDF----LRLLSHIRDTKSLIVYV 83
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD D +GS + + V D V+LV K DLLPSSL +
Sbjct: 84 VDIFDVNGSLIPGLHRFVGDNP-----------------VMLVGNKEDLLPSSLRRNKLR 126
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ+ + GI I+ + VSA KN ++ L+ ++ D +V+ +G N GKSTL+
Sbjct: 127 DWLRQQVNQAGIRPISTV-LVSAKKNHQIEDLLKEI-DRRRNDRDVYVVGVTNVGKSTLI 184
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K R G I +T + PGTTL ++E L +L DTPG++H Q
Sbjct: 185 NQIIKL----RTG------IKDLITTSRFPGTTLD--QIEIPLDDGHQLVDTPGIIHQAQ 232
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L ++ K+V KE+KPRTY+++ +I + G+ R D + + + + L
Sbjct: 233 MAHVLPAKDLKVVTPQKEIKPRTYQLQDQQTIFLGGVARFDYLKGP--KVGIVGYFDNNL 290
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K +A KH G L PP + + + R EF + S D+ G
Sbjct: 291 PMHRTKLAHADDFYHKHLGGLLTPPSTDD-LADFPPLERYEFAIKQKS------DLVFEG 343
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW ++ G G W +GV +++R A++
Sbjct: 344 LGWMTIP-AGTVVAG-WAPKGVAVLIRPAMI 372
>gi|240104509|pdb|3H2Y|A Chain A, Crystal Structure Of Yqeh Gtpase From Bacillus Anthracis
With Dgdp Bound
Length = 368
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 185/381 (48%), Gaps = 47/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L+HY +++DV+ L D DF R L + ++V+ +VD DF+GS+
Sbjct: 35 VICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGKSDALVVKIVDIFDFNGSW 86
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V + +V+LV K DL+P S+ + +HW R A++
Sbjct: 87 LPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVKHWXRYSAKQL 129
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ K + +SA K G+ L D + G + +V+ +G N GKST +N K
Sbjct: 130 GL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFINRXIKEFS-- 185
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
E +N++ T + PGTTL ++ + L ++ L+DTPG+++ +Q + ++
Sbjct: 186 ----DETENVI---TTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQXAHYVGKQSL 236
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
KL+ KE+KP +++ ++ +GL R D + T S L +H K E A
Sbjct: 237 KLITPTKEIKPXVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKA 294
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ + H G L PP E+ +E + V+ EF++ D+ +GLGW +V G
Sbjct: 295 DELYKNHAGDLLSPPTPEE-LENXPELVKYEFNIR-----EPKTDVVFSGLGWVTVNEPG 348
Query: 514 EAALGVWTYEGVDIVLRNALL 534
A + +GV + LR +L+
Sbjct: 349 -AKIVAHVPKGVSVSLRKSLI 368
>gi|420177913|ref|ZP_14684247.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM057]
gi|420181402|ref|ZP_14687603.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM053]
gi|394246318|gb|EJD91578.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM053]
gi|394247100|gb|EJD92348.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM057]
Length = 366
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 202/451 (44%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q N PGY P N+
Sbjct: 7 CIGCGAPLQSENKDAPGYV--PEHNM---------------------------------- 30
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L++Y +V+DV +E+ DF L S + +++ V
Sbjct: 31 ------FREDVICRRCFRLKNYNEVQDVGMES--EDF------LNLLTGLSEKKGIIVNV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GSF + ++V GN +++LV KIDLLP ++ R +
Sbjct: 77 VDVFDFEGSFINAIQRIV----------------GN-KKIILVANKIDLLPKQINHRRVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R+ AR+ G+ + +SA K WG+ L+ + + K +V+ +G N GKSTL+
Sbjct: 120 EWLRKSARKYGLEA-EDVVLISANKGWGIDELLQSINHVRNK-DDVYIVGTTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N K ++ G EK++V T + PGTTL ++ + L ++ +FDTPG++ +Q
Sbjct: 178 N---KLIEQSVG----EKDVV---TTSRFPGTTLDMIDIP--LDEKSFMFDTPGIIQSHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+T ++ E K++ E+K Y++ ++ GL R+D + + S L
Sbjct: 226 MTNYVSENELKIIIPKNEIKQHVYQLNEKQTLFFGGLARIDYVSGGKRPL--VCFFSNDL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTE A + + G L PP ++ ++ + + DI +G
Sbjct: 284 NIHRTKTEKANDLWKSQLGALLSPP------QDAQQFNLNDVKAVRLETGKTKRDIMISG 337
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LG+ ++ A + V + VD++LRN++L
Sbjct: 338 LGFITI--DAGAKVIVRVPKHVDVILRNSIL 366
>gi|294615006|ref|ZP_06694895.1| nitric-oxide synthase [Enterococcus faecium E1636]
gi|291592137|gb|EFF23757.1| nitric-oxide synthase [Enterococcus faecium E1636]
Length = 340
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 186/405 (45%), Gaps = 82/405 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q P GY P L K GL E
Sbjct: 7 CIGCGAVIQTNKPGELGY--TPQTALEK----------------------GLASGE---- 38
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
V C RC LRHY +++DV+ L D DF +L++ G + ++++
Sbjct: 39 ----------VYCQRCFRLRHYNEIQDVS----LTDDDF-----LRLLNELGQKDALIVN 79
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GS + + V D V+LV K+D+LP SL T+
Sbjct: 80 VVDIFDFNGSLIPGLHRFVGDNP-----------------VLLVGNKVDILPKSLKKTKL 122
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+++RA E GI + L SA K+ + L++ + + R +V+ +G N GKSTL
Sbjct: 123 TQWMKERAYEAGIRPVDVL-LTSAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKSTL 180
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K+ AG + +T + PGTTL ++E L L DTPG++H +
Sbjct: 181 INQIIKNT-AG---------VQDVITTSQFPGTTLD--KIEIPLDDGHFLIDTPGIIHRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L +++ +++ KE+KP+ Y++ G ++ + GL R D + S + S
Sbjct: 229 QMAHYLGKKDLRIIAPLKEIKPKVYQLNEGQTLFLGGLARFDFISGNRASF--IAYVSND 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHV 487
+ +H K E A +KH G LQPP ++ VE + VR EF V
Sbjct: 287 VNIHRTKLEKADEFYQKHVGGLLQPPRPDE-VEAFPELVRFEFSV 330
>gi|293374269|ref|ZP_06620597.1| ribosome biogenesis GTPase YqeH [Turicibacter sanguinis PC909]
gi|325844831|ref|ZP_08168283.1| ribosome biogenesis GTPase YqeH [Turicibacter sp. HGF1]
gi|292647102|gb|EFF65084.1| ribosome biogenesis GTPase YqeH [Turicibacter sanguinis PC909]
gi|325489018|gb|EGC91406.1| ribosome biogenesis GTPase YqeH [Turicibacter sp. HGF1]
Length = 369
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 217/452 (48%), Gaps = 89/452 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q NPK GY P+ +++K+ ENE
Sbjct: 6 CIGCGATIQTENPKEIGY--TPASSISKM----------------------------ENE 35
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
+ C RC L+HY +V+DV + + DF K++ G ++V+
Sbjct: 36 I---------IYCQRCFKLKHYNEVQDVALTS--DDF-------LKILQRVGETDALVIN 77
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
+VD DF GS +++ ++ GN ++LV K+DLLP S++ T+
Sbjct: 78 IVDIFDFSGSMVAGLSRHIN---------------GN--DILLVGNKVDLLPKSVNKTKL 120
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
HW+R+ +E G+ + + VSA K +G+ L++ +++ K +V+ +G N GKSTL
Sbjct: 121 NHWMRRSLKEYGLKPL-DVALVSAGKGFGIDELME-MIEKYRKGRDVYIVGCTNVGKSTL 178
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K E ++I+ T + PGTTL I+ + L + + DTPG+++ +
Sbjct: 179 VNRIIKRFTE------EREDII---TTSHFPGTTLDIIEIP--LDDCSAIVDTPGIINEH 227
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ +T + K + KE+K Y++ A ++ + GL RMD + S +VT +A+
Sbjct: 228 QLAHYVTPKVLKEITPKKEIKAGVYQLNAEQTLFVGGLARMDFVKGERTS-FVTHFANQ- 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K E A + G L+P + ++L + + FH+ D+ +
Sbjct: 286 LHIHRTKLEKADHLWATQAGAVLKPVAMDN--DQLMEMEKHTFHIG-----HEKTDLVIS 338
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGWF++ G+ + ++ +GV +++R +L+
Sbjct: 339 GLGWFTLSGTGQ-DINIYAPKGVGVMIRPSLI 369
>gi|448238803|ref|YP_007402861.1| GTPase [Geobacillus sp. GHH01]
gi|445207645|gb|AGE23110.1| GTPase [Geobacillus sp. GHH01]
Length = 369
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 193/390 (49%), Gaps = 48/390 (12%)
Query: 145 SEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVV 204
S ++K E+ ++C RC L+HY +V+DV ++ D DF + + R ++++V+ +V
Sbjct: 28 SVLEKDEEEIICQRCFRLKHYNEVQDVPLD----DSDFLNMLHR----IGESKALVVNIV 79
Query: 205 DAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEH 264
D DF+GS+ + + A EN ++LV K DLLP S+ +
Sbjct: 80 DIFDFNGSWIPGLPRF----AAENP-------------ILLVGNKADLLPRSVKYPKLLR 122
Query: 265 WVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLN 324
W+R+ A E G+ + + VSA K G+ +++ ++ + G+V+ +G N GKST +N
Sbjct: 123 WMRRMAEELGLCPV-DVCLVSAAKGIGMAKVME-AINRYREGGDVYVVGCTNVGKSTFIN 180
Query: 325 AIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQI 384
I + G+G N++ T + PGTTL ++ + L + A L+DTPG+++ +Q+
Sbjct: 181 RIIEEA-TGKG------NVI---TTSYFPGTTLDMIEIP--LESGATLYDTPGIINHHQM 228
Query: 385 TTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLP 444
+ + K++ +E+ PR Y++ G ++ GL R+D + S + + L
Sbjct: 229 AHFVDARDLKIITPKREIHPRVYQLNEGQTLFFGGLARLDYIKGGRRSF--VCYMANELT 286
Query: 445 LHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGL 504
+H K E A ++ G L PP ++ E V + V DI +GL
Sbjct: 287 VHRTKLEKADSLYANQLGDLLSPP-NKRYAAEFPPLVPRSLSVK-----ERKTDIVFSGL 340
Query: 505 GWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GW + G A L V +GVD+ +R +L+
Sbjct: 341 GWVTCNDPG-AQLVVHAPKGVDVFIRQSLI 369
>gi|372325415|ref|ZP_09520004.1| GTP-binding protein YqeHrequired for biogenesis of 30S ribosome
subunit [Oenococcus kitaharae DSM 17330]
gi|366984223|gb|EHN59622.1| GTP-binding protein YqeHrequired for biogenesis of 30S ribosome
subunit [Oenococcus kitaharae DSM 17330]
Length = 384
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 201/430 (46%), Gaps = 88/430 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L Q T+P GY K K H +
Sbjct: 18 CIGCGSLFQTTDPDQAGYI--------KASKLH-------------------------DY 44
Query: 144 TSEVKKHEKPV--VCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVV 200
+ + + P+ +C RC LRHY +++ V +E+ H +K++SA + +++V
Sbjct: 45 LAGLTSPDDPIDLLCERCFKLRHYNQIQPVALES-------SHF--QKILSAIADKKALV 95
Query: 201 LMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPT 260
L ++D D GS +++ + GN P +V+V K D+LP S+
Sbjct: 96 LYLIDLFDVSGSMINGISRFI----------------GNNP-IVIVGNKADVLPKSVKKH 138
Query: 261 RFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKS 320
+ W+++ A + GI + + +SA K ++L++++ D + ++ +G N GKS
Sbjct: 139 KLADWLQREAGKQGIQAVRTI-VLSADKGDAGETLLNEIDDYLDRYPEIYVVGVTNVGKS 197
Query: 321 TLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLH 380
TL+N I K++ +G+G S +T + PGTTL R+ L + + DTPG++H
Sbjct: 198 TLINQIIKAL-SGKG---------SVITTSRFPGTTLD--RIVIPLTEKTAIIDTPGIIH 245
Query: 381 PNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWAS 440
+Q+T ++ ++ K + NKE+K RT+++++G +I L MD ++I +T +
Sbjct: 246 ASQMTHVVSPKDYKYLLPNKEIKARTFQLQSGQTIFFGSLGWMDFLNR--QNISITAYFE 303
Query: 441 PYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIA 500
L LH GKTE + G+ L PI E ++ W+ +E V D+
Sbjct: 304 NNLMLHRGKTEKSSDFFRLQAGKTLL-PITESAMD----WISQEIKVLPGQ------DVV 352
Query: 501 AAGLGWFSVR 510
+GLGW + R
Sbjct: 353 ISGLGWVTFR 362
>gi|261418457|ref|YP_003252139.1| GTP-binding protein YqeH [Geobacillus sp. Y412MC61]
gi|319767582|ref|YP_004133083.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. Y412MC52]
gi|261374914|gb|ACX77657.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. Y412MC61]
gi|317112448|gb|ADU94940.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. Y412MC52]
Length = 369
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 192/390 (49%), Gaps = 48/390 (12%)
Query: 145 SEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVV 204
S ++K E+ ++C RC L+HY +V+DV ++ D DF + + R ++++V+ +V
Sbjct: 28 SVLEKDEEEIICQRCFRLKHYNEVQDVPLD----DSDFLNMLHR----IGESKALVVNIV 79
Query: 205 DAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEH 264
D DF+GS+ + + A EN ++LV K DLLP S+ +
Sbjct: 80 DIFDFNGSWIPGLPRF----AAENP-------------ILLVGNKADLLPRSVKYPKLLR 122
Query: 265 WVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLN 324
W+R+ A E G+ + + VSA K G+ +++ ++ + G+V+ +G N GKST +N
Sbjct: 123 WMRRMAEELGLCPV-DVCLVSAAKGIGMAKVME-AINRYREGGDVYVVGCTNVGKSTFIN 180
Query: 325 AIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQI 384
I + G+G N++ T + PGTTL ++ + L A L+DTPG+++ +Q+
Sbjct: 181 RIIEEA-TGKG------NVI---TTSYFPGTTLDMIEIP--LEGGATLYDTPGIINHHQM 228
Query: 385 TTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLP 444
+ + K++ +E+ PR Y++ G ++ GL R+D + S + + L
Sbjct: 229 AHFVDARDLKIITPKREIHPRVYQLNEGQTLFFGGLARLDYIKGGRRSF--VCYMANELT 286
Query: 445 LHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGL 504
+H K E A ++ G L PP ++ E V + V DI +GL
Sbjct: 287 VHRTKLEKADSLYANQLGDLLSPP-NKRYAAEFPPLVPRSLSVK-----ERKTDIVFSGL 340
Query: 505 GWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GW + G A L V +GVD+ +R +L+
Sbjct: 341 GWVTCNDPG-AQLVVHAPKGVDVFIRQSLI 369
>gi|358061220|ref|ZP_09147884.1| GTP-binding protein YqeH [Staphylococcus simiae CCM 7213]
gi|357256313|gb|EHJ06697.1| GTP-binding protein YqeH [Staphylococcus simiae CCM 7213]
Length = 366
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 212/455 (46%), Gaps = 99/455 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q + PGY P N+
Sbjct: 7 CIGCGAPLQSEDKSKPGYV--PEHNM---------------------------------- 30
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARS-VVLM 202
V+C RC L++Y +V+DV +E+ DF KL+S +S +++
Sbjct: 31 ------FRDDVICRRCFRLKNYNEVQDVGLES--EDF-------LKLLSGLANKSGIIVN 75
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GSF V ++V GN +++L K+DLLP ++ R
Sbjct: 76 VVDVFDFEGSFINAVKRIV----------------GN-KKIILAANKLDLLPKQINKRRV 118
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+++ AR+ G+ + +SA K WG++ L+ + + + +V+ +G N GKSTL
Sbjct: 119 KEWLKRTARKYGLEA-DDIVLISAEKGWGIEDLLSSIAKIR-QHEDVYVVGTTNVGKSTL 176
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N K ++A G EK++V T + PGTTL ++ + L ++DTPG++ +
Sbjct: 177 IN---KLIEASVG----EKDVV---TTSRFPGTTLDMIDIP--LDETTFMYDTPGIIQDH 224
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+T +T +E K + KE+K R Y++ ++ GL R+D + + +A+
Sbjct: 225 QMTHIVTEKELKTIMPKKEIKQRVYQLNENQTLFFGGLARIDYISGGKRPL-ICFFANE- 282
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVE--ELGKWVRKEFHVSGSSWDSSSVDIA 500
L +H K E A + + G L PP + + E+ K VR E +G DI
Sbjct: 283 LNIHRTKLEKANELWKSQLGELLTPPNNPENFDLSEV-KAVRLE---TG----KEKRDIM 334
Query: 501 AAGLGWFSVRLKGEAA-LGVWTYEGVDIVLRNALL 534
+GLG+ ++ GE A + V + VD++LRN++L
Sbjct: 335 ISGLGFITI---GEGAKVIVRVPKNVDVILRNSIL 366
>gi|116618829|ref|YP_819200.1| GTP-binding protein YqeH [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|381337138|ref|YP_005174913.1| GTPase YqeH [Leuconostoc mesenteroides subsp. mesenteroides J18]
gi|116097676|gb|ABJ62827.1| Predicted GTPase [Leuconostoc mesenteroides subsp. mesenteroides
ATCC 8293]
gi|356645104|gb|AET30947.1| GTPase YqeH [Leuconostoc mesenteroides subsp. mesenteroides J18]
Length = 379
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 132/457 (28%), Positives = 198/457 (43%), Gaps = 103/457 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG LMQ + GY P L K +++E F
Sbjct: 20 CIGCGALMQVEDKDKIGYL--PMSALKK-------SISSEELF----------------- 53
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
C RC LRHY +++ V L D DF + L S +++++ V
Sbjct: 54 ------------CQRCFRLRHYNEIQPVE----LTDDDFANL----LHQISDTKALIVYV 93
Query: 204 VDAADFDGS----FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSP 259
+D D GS PR V K +N +++V K+DLLP L+
Sbjct: 94 IDVFDVTGSAISGLPRFVGK-------DNP-------------ILVVANKVDLLPKLLNK 133
Query: 260 TRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGK 319
R ++W+R + GI + + SA + L L+D + + R +V+ +G N GK
Sbjct: 134 NRLKNWLRTELKAQGIQPV-DVFLTSATRPKNLDDLLDTIDNFRDGR-DVFVVGVTNVGK 191
Query: 320 STLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLL 379
STL+N I KS R G I + +T + PGTTL R+E L +L DTPG++
Sbjct: 192 STLINQIIKS----RTG------IQNLITTSRFPGTTLD--RIEIPLEDGQQLIDTPGII 239
Query: 380 HPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWA 439
+Q+ LT ++ K E+KPRTY++ +I I GL R D + +I T +
Sbjct: 240 KRDQMAHVLTDKDLKFALPKNEIKPRTYQLNPEQTIFIGGLARFDFISGARSAI--TAYF 297
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
L LH K A E+H G L P +L ++ EF ++ S DI
Sbjct: 298 ENNLNLHRTKLIGADDFYEQHAGGLLVPA-----PSQLQNLIKHEFSITEDS------DI 346
Query: 500 AAAGLGWFSVRLKGEAALGV--WTYEGVDIVLRNALL 534
+GLGW SV A + V W +GV +++R A++
Sbjct: 347 VFSGLGWISV----PAGIKVAGWAPKGVSVLIRKAMI 379
>gi|315645928|ref|ZP_07899049.1| ribosome biogenesis GTPase YqeH [Paenibacillus vortex V453]
gi|315278689|gb|EFU42003.1| ribosome biogenesis GTPase YqeH [Paenibacillus vortex V453]
Length = 374
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 188/383 (49%), Gaps = 46/383 (12%)
Query: 152 KPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDG 211
+PV+C RC +++Y + VTV D D + R L G ++V+ +VD DF+G
Sbjct: 38 EPVICQRCFRIKNYNEASSVTV-------DQDEFL-RLLGQIGGKNALVIHIVDLFDFEG 89
Query: 212 SFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAR 271
S + + V GN P VVL V K DLLP + + +WV+++ +
Sbjct: 90 SLISGLQRFV----------------GNNP-VVLAVNKTDLLPKVTNWNKVLNWVQKQCK 132
Query: 272 EDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVD 331
E G+ + + SA KN G + L++ V G R +V+ +GA N GKS+L+N + +
Sbjct: 133 EHGL-RTEDIVLCSAKKNQGFERLLEMVGQHRGDR-DVYVVGATNVGKSSLINRLIR--- 187
Query: 332 AGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTRE 391
+ ++ LT + PGTTL +V + L + DTPG+++P + + ++RE
Sbjct: 188 -------DYSDLDQELTVSRYPGTTLDMVNIP--LDDGRYIIDTPGIVYPWRYSEVVSRE 238
Query: 392 EQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTE 451
+ V LKP Y++ G ++ G R D + +S T + S L +H K E
Sbjct: 239 DLGTVMPENPLKPMVYQLNEGQTLFFGGFGRFDFLQGEHQSF--TCFISGRLGIHRTKLE 296
Query: 452 NACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRL 511
A ++ E+H G L PP E R+EEL +W R E + + D+ +GLGW +
Sbjct: 297 RADSLFEEHAGELLSPPTKE-RLEELPEWTRHEIRIP----KGTRQDVFISGLGWIKING 351
Query: 512 KGEAALGVWTYEGVDIVLRNALL 534
+ A + V +G+ ++ R +L+
Sbjct: 352 EQGALVAVHAPKGIKVLSRPSLI 374
>gi|222151493|ref|YP_002560649.1| GTP-binding protein YqeH [Macrococcus caseolyticus JCSC5402]
gi|222120618|dbj|BAH17953.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 396
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 217/455 (47%), Gaps = 100/455 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q + PGY P+ +L K
Sbjct: 38 CIGCGAELQSDDQNKPGYV--PASSLKK-------------------------------- 63
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L+HY +++DV N+ D DF L + S + +++ V
Sbjct: 64 --------EDVICKRCFRLKHYNEIQDV---NMTSD-DF----LTMLNALSEKQGIIVNV 107
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF GS+ + ++V GN +V++ K+DLLP ++ R +
Sbjct: 108 IDVFDFQGSWINGLKRIV----------------GN-KKVIIAANKMDLLPKLINKRRVK 150
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ ++A+ G++ + +SA KN G++ L++ + L + +V+ +G N GKSTL+
Sbjct: 151 LWIEKQAKALGMNP-DDVVLISAQKNHGIEELLESIETLRANQ-DVYVVGTTNVGKSTLI 208
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N K ++ G EK+++ T + PGTTL ++ + L + LFDTPG++ +Q
Sbjct: 209 N---KLIETSVG----EKDVI---TTSHFPGTTLDLIDIP--LDEHSFLFDTPGIIQAHQ 256
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+T +T +E K++ +E+KPR +++ G ++ + GL+R+D S+ + S L
Sbjct: 257 MTHYVTDKELKVIMPKQEIKPRNFQLNEGQTLFLGGLVRVDYVSGGRRSL--NCFVSNLL 314
Query: 444 PLHMGKTENACTMVEKHFGRQLQPP-IGE---KRVEELGKWVRKEFHVSGSSWDSSSVDI 499
+H KT+NA + + G L PP GE V+++ V++E DI
Sbjct: 315 HIHRTKTDNAQELWYRQIGDLLTPPGSGEFDFDNVKQVQLSVKEE-----------KQDI 363
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLG+ +V KG A + V + VD+ LR ++L
Sbjct: 364 IISGLGFITVD-KG-AQIVVHAPKQVDVYLRPSIL 396
>gi|56421060|ref|YP_148378.1| GTP-binding protein YqeH [Geobacillus kaustophilus HTA426]
gi|375009615|ref|YP_004983248.1| hypothetical protein [Geobacillus thermoleovorans CCB_US3_UF5]
gi|56380902|dbj|BAD76810.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
gi|359288464|gb|AEV20148.1| hypothetical protein GTCCBUS3UF5_28450 [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 369
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 192/390 (49%), Gaps = 48/390 (12%)
Query: 145 SEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVV 204
S ++K E+ ++C RC L+HY +V+DV ++ D DF + + R ++++V+ +V
Sbjct: 28 SVLEKDEEEIICQRCFRLKHYNEVQDVPLD----DSDFLNMLHR----IGESKALVVNIV 79
Query: 205 DAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEH 264
D DF+GS+ + + A EN ++LV K DLLP S+ +
Sbjct: 80 DIFDFNGSWIPGLPRF----AAENP-------------ILLVGNKADLLPRSVKYPKLLR 122
Query: 265 WVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLN 324
W+R+ A E G+ + + VSA K G+ +++ ++ + G+V+ +G N GKST +N
Sbjct: 123 WMRRMAEELGLRPV-DVCLVSAAKGIGMAKVME-AINRYREGGDVYVVGCTNVGKSTFIN 180
Query: 325 AIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQI 384
I + G+G N++ T + PGTTL ++ + L A L+DTPG+++ +Q+
Sbjct: 181 RIIEEA-TGKG------NVI---TTSYFPGTTLDMIEIP--LEGGATLYDTPGIINHHQM 228
Query: 385 TTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLP 444
+ + K++ +E+ PR Y++ G ++ GL R+D + S + + L
Sbjct: 229 AHFVDARDLKIITPKREIHPRVYQLNEGQTLFFGGLARLDYIKGGRRSF--VCYMANELT 286
Query: 445 LHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGL 504
+H K E A ++ G L PP ++ E V + V DI +GL
Sbjct: 287 VHRTKLEKADSLYANQLGDLLSPP-NKRYAAEFPPLVPRSLSVK-----ERKTDIVFSGL 340
Query: 505 GWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GW + G A L V +GVD+ +R +L+
Sbjct: 341 GWVTCNDPG-AQLVVHAPKGVDVFIRQSLI 369
>gi|52081117|ref|YP_079908.1| GTP-binding protein YqeH [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319644926|ref|ZP_07999159.1| YqeH protein [Bacillus sp. BT1B_CT2]
gi|404489998|ref|YP_006714104.1| GTPase YqeH [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423683094|ref|ZP_17657933.1| GTP-binding protein YqeH [Bacillus licheniformis WX-02]
gi|52004328|gb|AAU24270.1| essential GTPase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52348997|gb|AAU41631.1| ribosomal assembly protein YqeH [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|317392735|gb|EFV73529.1| YqeH protein [Bacillus sp. BT1B_CT2]
gi|383439868|gb|EID47643.1| GTP-binding protein YqeH [Bacillus licheniformis WX-02]
Length = 366
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 186/382 (48%), Gaps = 50/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
V+C RC L++Y +++DV+ L D DF K++ G S+++ +VD DF+GS
Sbjct: 34 VICQRCFRLKNYNEIQDVS----LTDDDF-----LKILHGIGETDSLIVKIVDIFDFNGS 84
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + + V G P ++L+ K D+LP S+ R +W+++ A+E
Sbjct: 85 WINGLNRFV----------------GGNP-ILLIGNKADILPKSVKRERLVNWMKREAKE 127
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + L VSA + G+K ID ++ + +V+ +G N GKST +N I K V
Sbjct: 128 LGLRPVDVL-LVSAGRGQGMKDAID-AIEHYRQGKDVYVVGCTNVGKSTFINRIIKEVSG 185
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
E +I+ T + PGTTL + + L + ++DTPG+++ +Q+ + + +
Sbjct: 186 -------EDDII---TTSQYPGTTLDAIEIP--LDDGSAMYDTPGIINHHQMAHYVAKRD 233
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K++ KELKPRT+++ ++ GL R D S + L +H K EN
Sbjct: 234 LKILTPKKELKPRTFQLNEEQTLFFGGLSRFDYASGGRSSF--VCYMPNELKIHRTKLEN 291
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A + EKH G L PP E ++ V+ F + D+ +GLGW +V+
Sbjct: 292 ADQLYEKHAGEMLAPPAKED-LDSFPALVKHTFTIK-----EPKTDVVFSGLGWVTVQGA 345
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
+ + +GV + LR +L+
Sbjct: 346 NQKIVA-HAPKGVHVFLRRSLI 366
>gi|297529309|ref|YP_003670584.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. C56-T3]
gi|297252561|gb|ADI26007.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. C56-T3]
Length = 369
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 192/390 (49%), Gaps = 48/390 (12%)
Query: 145 SEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVV 204
S ++K E+ ++C RC L+HY +V+DV ++ D DF + + R ++++V+ +V
Sbjct: 28 SVLEKDEEEIICQRCFRLKHYNEVQDVPLD----DSDFLNMLHR----IGESKALVVNIV 79
Query: 205 DAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEH 264
D DF+GS+ + + A EN ++LV K DLLP S+ +
Sbjct: 80 DIFDFNGSWIPGLPRF----AAENP-------------ILLVGNKADLLPRSVKYPKLLR 122
Query: 265 WVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLN 324
W+R+ A E G+ + + VSA K G+ +++ ++ + G+V+ +G N GKST +N
Sbjct: 123 WMRRMAEELGLCPV-DVCLVSAAKGIGMAKVME-AINRYREGGDVYVVGCTNVGKSTFIN 180
Query: 325 AIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQI 384
I + G+G N++ T + PGTTL ++ + L A L+DTPG+++ +Q+
Sbjct: 181 RIIEEA-TGKG------NVI---TTSYFPGTTLDMIEIP--LEGGATLYDTPGIINHHQM 228
Query: 385 TTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLP 444
+ + K++ +E+ PR Y++ G ++ GL R+D + S + + L
Sbjct: 229 AHFVDARDLKIITPKREIHPRVYQLNEGQTLFFGGLARLDYIKGGRRSF--VCYMANELT 286
Query: 445 LHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGL 504
+H K E A ++ G L PP ++ E V + V DI +GL
Sbjct: 287 VHRTKLEKADSLYANQLGDLLSPP-NKRYAAEFPPLVPRSLSVK-----ERKTDIVFSGL 340
Query: 505 GWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GW + G A L V +GVD+ +R +L+
Sbjct: 341 GWVTCNDLG-AQLVVHAPKGVDVFIRQSLI 369
>gi|339481026|ref|ZP_08656685.1| GTPase YqeH [Leuconostoc pseudomesenteroides KCTC 3652]
Length = 381
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 197/451 (43%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG LMQ T+P+ GY L+ ++KS + +++ F
Sbjct: 20 CIGCGALMQITSPEKAGYL-----PLSALKKS----IDSDALF----------------- 53
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
C RC LRHY +++ V L D DF R L S +++++ V
Sbjct: 54 ------------CQRCFRLRHYNEIQPVE----LTDDDF----ARLLHQISETKALIVYV 93
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD D GS + + V D N P +++V K+DLLP L R +
Sbjct: 94 VDLFDVTGSEIAGLPRFVGD---------------NNP-ILVVGNKVDLLPKLLKQNRLK 137
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W++ + GI K + SA L L++ + L R +V+ +G N GKSTL+
Sbjct: 138 QWLQAMLKTQGI-KPADIFLTSAAHPKNLDELLECIDQLRHDR-DVYVVGVTNVGKSTLI 195
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I KS R G + +T + PGTTL R+E L +L DTPG++ Q
Sbjct: 196 NQIIKS----RTG------VQDLITTSRFPGTTLD--RIEIPLADGHQLIDTPGIIKREQ 243
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + ++ K KE+KPRTY++ ++ + GL R D S E VT + L
Sbjct: 244 MAHVIADKDLKYALPKKEIKPRTYQLNPEQTLFLGGLARFDF--LSGERTAVTAYFENNL 301
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K A +H G L P L V++EF++ S D+ AG
Sbjct: 302 NIHRTKLNGADEFYNRHVGELLTPAPLNLTTSPL---VKREFNIIEKS------DLVFAG 352
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW + L + W EGVD+++R A++
Sbjct: 353 LGWIT--LPAGIKVAGWVPEGVDVLIRKAMI 381
>gi|224476705|ref|YP_002634311.1| GTP-binding protein YqeH [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222421312|emb|CAL28126.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 366
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 210/453 (46%), Gaps = 95/453 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q +PK PGY P+ +L
Sbjct: 7 CIGCGAPLQSEDPKKPGYV--PAHSL---------------------------------- 30
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDF-DFDHTVGRKLMSASGARSVVLM 202
H++ V+C RC L++Y +V+DV +++ DF D L + + + +V+
Sbjct: 31 ------HKEDVICQRCFRLKNYNEVQDVGMDS--EDFLDL-------LNNLADKKGLVVN 75
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V D DF+GSF + ++V GN +V+L KIDLLP ++ R
Sbjct: 76 VCDIFDFEGSFIHALKRIV----------------GN-KKVILAANKIDLLPKQINKRRV 118
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+++ A++ G+ + +SA K +G+ L++ +D +V+ +G N GKSTL
Sbjct: 119 KEWLKKTAKKYGLDP-EAVILLSAQKGYGIDELLE-AIDKYRNHEDVYIVGTTNVGKSTL 176
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N K ++ G EK++V T + PGTTL ++ + L +FDTPG++ +
Sbjct: 177 IN---KLIEHSVG----EKDVV---TTSRFPGTTLDMIDIP--LDENTFMFDTPGIIQEH 224
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+T ++ +E K + NKE+K R Y++ ++ GL R+D + + S
Sbjct: 225 QMTHYVSDKELKQIMPNKEIKQRVYQLNENQTLFFGGLARIDYVSGGKRPL--VCYFSNN 282
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVE-ELGKWVRKEFHVSGSSWDSSSVDIAA 501
L +H KTE A T+ + G L PP + K VR E +G D+
Sbjct: 283 LNIHRTKTEKADTLWQTQLGNLLTPPNHSDHFDLNDIKAVRLE---TG----KEKRDVMI 335
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLG+ ++ A + V + VD+VLRN+++
Sbjct: 336 SGLGFITI--GPGAKVVVHVPKSVDVVLRNSIM 366
>gi|403379144|ref|ZP_10921201.1| hypothetical protein PJC66_04878 [Paenibacillus sp. JC66]
Length = 369
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 201/451 (44%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q +P GY P Q L K+
Sbjct: 7 CEGCGVHLQMDDPSALGYV--PEQALLKI------------------------------- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
PV+C RC ++HY ++ T P+ D R L + RS+V+ +
Sbjct: 34 ---------PVICQRCFRIKHYNEMTSET-----PNQD---DFLRMLGHIAHTRSLVIHI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+GS + + + G+ P V+LVV K+DLLP + +
Sbjct: 77 IDVFDFEGSLISGLQRFI----------------GSNP-VLLVVNKMDLLPKVTNWNKVV 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+WV+++A+++G+ K+ + SA K G +L+ + L R +V+ +GA NAGKSTL+
Sbjct: 120 NWVQKQAKDNGL-KVADVALCSAKKGIGFDTLLKKLDSLRQGR-DVYVVGATNAGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + K + ++ S LT + PGTTL +VR+ L + DTPG+++ ++
Sbjct: 178 NRLIK----------DYSDLESELTTSHYPGTTLNMVRIP--LDDGKAIIDTPGIVYKHR 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
++ + + + +K +KP Y++ ++ L+R D +S T + S +
Sbjct: 226 LSEVVPKPLLSTLLPDKPIKPVVYQLNEKQTLFFGSLVRFDFARGERQSF--TCYTSNRI 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
P+H K E A + +H G L PP ++ +E + W R V S +I +G
Sbjct: 284 PVHRTKLERADELYAQHKGEMLAPPTLDQ-LEHIPHWTR----VPVSIRKGQEAEILISG 338
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW A + + EG I +R +L+
Sbjct: 339 LGWIKANGTQGAEVVIHAPEGTKIAVRKSLI 369
>gi|399516596|ref|ZP_10758193.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Leuconostoc pseudomesenteroides 4882]
gi|398648505|emb|CCJ66220.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Leuconostoc pseudomesenteroides 4882]
Length = 381
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 193/451 (42%), Gaps = 89/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG LMQ T+P+ GY P L K S
Sbjct: 20 CIGCGALMQITDPEKAGYL--PLSALKKAIDS---------------------------- 49
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ C RC LRHY +++ V L D DF R L S ++++ V
Sbjct: 50 --------DALFCKRCFRLRHYNEIQPVE----LTDDDF----ARLLHQISDTNALIVYV 93
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D D GS ++A + E N +++V K+DLLP L+ R +
Sbjct: 94 MDLFDMTGS---EIAGLPRFVGENNP-------------ILVVGNKVDLLPKLLNQNRLK 137
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W++ + GI K + SA + +L++ V L R +V+ +G N GKSTL+
Sbjct: 138 QWLQTMLKAQGI-KPADIFLTSAAHPKNIDALLERVDQLRLDR-DVYVVGVTNVGKSTLI 195
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I KS R G + +T + PGTTL R+E L +L DTPG++ Q
Sbjct: 196 NQIIKS----RTG------VQDLITTSRFPGTTLD--RIEIPLADGHQLIDTPGIIKREQ 243
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + ++ K KE+KPRTY++ ++ + GL R D S E VT + L
Sbjct: 244 MAHVIADKDLKYALPKKEIKPRTYQLNPEQTLFLGGLARFDF--VSGERTAVTAYFENNL 301
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K A +H G L P L V++EF++ S D+ AG
Sbjct: 302 NIHRTKLNGADAFYNRHVGELLTPAPLNLTASPL---VKREFNIIEKS------DLVFAG 352
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW +V G G W EGVD+++R A++
Sbjct: 353 LGWITVP-AGIKVAG-WVPEGVDVLIRKAMI 381
>gi|330794402|ref|XP_003285268.1| hypothetical protein DICPUDRAFT_149114 [Dictyostelium purpureum]
gi|325084810|gb|EGC38230.1| hypothetical protein DICPUDRAFT_149114 [Dictyostelium purpureum]
Length = 750
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 208/451 (46%), Gaps = 95/451 (21%)
Query: 75 DEATPKLTVCPGCGVLMQDTNPKHPGYF-----IRPSQNLNKV----------------- 112
D+ + L+ C GCG +Q NPK PG+ ++ + LNKV
Sbjct: 123 DKVSLSLSRCSGCGCTLQTNNPKEPGFIPESVALKNIEALNKVSEQQKKQSKKEIKKQQQ 182
Query: 113 ---------RKSHLVHVANESEFSNSLKKGGLVVFEAENETSEVKKHEKPVVCARCHALR 163
++ ++ V E++ GG F+ + K+++ +C RCH L+
Sbjct: 183 EEKEMDEENKRFSILDVDTEND-------GGEEYFDGFFGIQKKLKNKEKKICQRCHLLK 235
Query: 164 HYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSD 223
+YG+V V++ P F + L V++ VVD DF GSF +V
Sbjct: 236 NYGRVAPVSI----PIEKF----RKNLSKIKELNCVIVKVVDLMDFHGSFIEDFRDIV-- 285
Query: 224 TAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHF 283
GN P V++V K+DLLPS + R E+W+ A+ G++ ++ +
Sbjct: 286 --------------GNNP-VIIVGNKMDLLPSDIHKDRIENWITSEAKARGLAHLSHVLL 330
Query: 284 VSAVKNWGLKSLIDDVVDLAGKRG-NVWAIGAQNAGKSTLLNAIAK-------------- 328
+S+ G+K I ++ + +RG +V+ +G N GKST +N++
Sbjct: 331 LSSTNKDGIKQFIIELEKI--RRGRDVFVLGCSNVGKSTFVNSLVDEYNSKVEFVKSDDQ 388
Query: 329 --------SVDAGRGGDGEE--KNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGL 378
S+ + + E+ ++I S +T + +PGTTL ++ + L + LFDTPG+
Sbjct: 389 KEDKKKKLSIQEQKELEREKLLRSIQSKITTSILPGTTLNLLSLP--LWKDSTLFDTPGI 446
Query: 379 LHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVW 438
+P Q+ L+ +E + V K +KP + G ++ I GL+R+D + S ++ V+
Sbjct: 447 DNPKQMLKLLSLKELRQVLPTKRIKPTLVHLIDGKTLFIGGLVRIDY--TGPLSTFL-VY 503
Query: 439 ASPYLPLHMGKTENACTMVEKHFGRQLQPPI 469
S +PLH+ T+ A + +K GR L PPI
Sbjct: 504 TSNSIPLHLTSTKKADKLFKKQQGRLLTPPI 534
>gi|239827797|ref|YP_002950421.1| GTP-binding protein YqeH [Geobacillus sp. WCH70]
gi|239808090|gb|ACS25155.1| Nitric-oxide synthase [Geobacillus sp. WCH70]
Length = 370
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 199/405 (49%), Gaps = 55/405 (13%)
Query: 137 VFEAENET-------SEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRK 189
+ ++E+ET S ++K ++ V+C RC L+HY +V+DV L D DF + R
Sbjct: 14 LIQSEDETKPGYAPKSVLEKEKEEVICQRCFRLKHYNEVQDVA----LTDDDFLKILHR- 68
Query: 190 LMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTK 249
+ ++V+ +VD DF+GS+ + + V++ ++LV K
Sbjct: 69 ---IGQSEALVVKIVDIFDFNGSWLPGLHRFVANNP-----------------IMLVGNK 108
Query: 250 IDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNV 309
+DLLP S+ + HW++Q A + G+ I + VSAVK G+ +++ + + +V
Sbjct: 109 VDLLPKSVKYPKLIHWMKQSASDLGLKPI-DICLVSAVKGIGMAKVMEAIEKYRFGK-DV 166
Query: 310 WAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQ 369
+ +G N GKST +N I + G+G N++ T + PGTTL ++ + L
Sbjct: 167 YVVGCTNVGKSTFINRIIQEA-TGKG------NVI---TTSYFPGTTLDMIEIP--LDDG 214
Query: 370 AKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESS 429
A ++DTPG+++ +Q+ + +++ K++ +E+ P+ Y++ ++ GL R+D +
Sbjct: 215 AAIYDTPGIINHHQMAHFVDKKDLKIITPKREIHPKVYQLNEQQTLFFGGLARLDYIKGG 274
Query: 430 VESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSG 489
S + S L +H K E A + G L PP R + ++ E H
Sbjct: 275 RRSF--VCYFSNELLIHRTKLEKADALYANQLGELLSPP----RKHYIDQFPPLEAHT-- 326
Query: 490 SSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+ DI +GLGW + G A + + +GVDI++R +L+
Sbjct: 327 FTIKERKTDIVFSGLGWVTCNEPG-AQVVAYAPKGVDILIRKSLI 370
>gi|315658127|ref|ZP_07910999.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis M23590]
gi|315496456|gb|EFU84779.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis M23590]
Length = 366
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 205/452 (45%), Gaps = 93/452 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q N PGY P NL
Sbjct: 7 CIGCGAPLQSENKNAPGYV--PEHNL---------------------------------- 30
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARS-VVLM 202
+ V+C RC L++Y +V+DV +++ DF L++ RS +++
Sbjct: 31 ------FREDVICRRCFRLKNYNEVQDVGMDS--EDF-------LNLLNGLSDRSGIIVN 75
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GSF + ++V GN +++LV K+DLLP ++ R
Sbjct: 76 VVDIFDFEGSFINALKRIV----------------GN-KKIILVANKLDLLPKQINHRRV 118
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+++ A++ G+ ++ +SA K WG++ L+ ++ +V+ +G N GKSTL
Sbjct: 119 KEWLKRSAKKYGLEA-EEVVLISAEKGWGIEDLLT-AINQNRDHDDVYIVGTTNVGKSTL 176
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N K ++ G EK++V T + PGTTL ++ + L + ++DTPG++ +
Sbjct: 177 IN---KLIELSVG----EKDVV---TTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQEH 224
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+T +T +E K + KE+K R Y++ ++ + GL R+D + + S
Sbjct: 225 QMTHLVTEKELKTIIPKKEIKQRVYQLNESQTLFLGGLARIDYVSGGKRPL--ICFFSND 282
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H KTE A + + G L PP + + K+ DI +
Sbjct: 283 LNIHRTKTEKANELWKNQLGDLLTPP------NNVSNFNLKDIKAVRLETGKEKRDIMIS 336
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLG+ ++ A + V + VD+VLRN++L
Sbjct: 337 GLGFITI--DSGAKVIVRVPKNVDVVLRNSIL 366
>gi|157364447|ref|YP_001471214.1| HSR1-like GTP-binding protein [Thermotoga lettingae TMO]
gi|157315051|gb|ABV34150.1| GTP-binding protein HSR1-related [Thermotoga lettingae TMO]
Length = 367
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 197/456 (43%), Gaps = 99/456 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q N + PGY P + K R AE
Sbjct: 3 CRGCGAQIQHENQRKPGYV--PLEVFQKRR--------------------------AEG- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
K ++C RC +RHYGK++ V + N DF ++L V++ V
Sbjct: 34 --------KDILCQRCFRMRHYGKLESVKITN-----DF----AKRLSKLVRKFEVIVWV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D +DF+GS+ +A+++ D + ++VV KIDLLP +++ +
Sbjct: 77 LDISDFEGSYDPLLAEILKDLNK-----------------IIVVNKIDLLPKAVTIREIK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
WV +R + + ++ SA KN+G +SL+ + NV +G N GKS++
Sbjct: 120 SWVEERLKG---QRFRDVYLTSAAKNYGTRSLLRAL----SLYENVIFVGMTNVGKSSIF 172
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
+ G + N+ P PGTTL +++ +FDTPG+ +
Sbjct: 173 QKLT----------GVDVNV------TPFPGTTLDLIKAT---VKNTDIFDTPGIFSNRR 213
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
I L QK ++ K L T++ + G +I I GL R+D + ++AS +
Sbjct: 214 IIDFLEPGSQKKIS-QKSLSRMTFKPQKGQTIFIGGLCRLDFSFDTELPPIFQIFASESV 272
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVE-ELGKWVRKEFHVSGSSWDSSSVDIAAA 502
H+ T A + K +GR L PP K + + W +EF + ++ ++A A
Sbjct: 273 KFHVTSTSKADNLHVKQYGRLLVPPFKPKELSMDSLNWKEEEFEL------NTGEELAIA 326
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL-PYR 537
GLGW SVR +G V T V + R AL+ PYR
Sbjct: 327 GLGWLSVR-RGPFKAKVKTINDVIVKKRKALVNPYR 361
>gi|404417968|ref|ZP_10999750.1| GTPase YqeH [Staphylococcus arlettae CVD059]
gi|403489684|gb|EJY95247.1| GTPase YqeH [Staphylococcus arlettae CVD059]
Length = 368
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 204/453 (45%), Gaps = 95/453 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q NP+ GY P NL
Sbjct: 9 CIGCGAPLQSDNPEAAGYV--PEHNL---------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L++Y +V+DV + + DF L + + +++ V
Sbjct: 33 ------FREDVICKRCFRLKNYNEVQDVGMNS--DDF------LNLLNGLTDKKGIIVNV 78
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GSF + ++V GN +V+LV K+DLLP ++ R
Sbjct: 79 VDVFDFEGSFINALKRIV----------------GN-KKVILVANKLDLLPKQINKRRVT 121
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+++ AR+ G+ T + +SA K WG+ L+ ++ + +V+ +G N GKSTL+
Sbjct: 122 EWLKKTARKYGLEAETVV-LISAEKGWGIDDLMQ-AIESHRNQQDVYIVGTTNVGKSTLI 179
Query: 324 NA-IAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
N I +SV GE+ + T + PGTTL ++ + L + +FDTPG++ +
Sbjct: 180 NKLIEQSV-------GEKDTV----TTSRFPGTTLDMIDIP--LDETSFMFDTPGIIQEH 226
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
QIT ++ +E K + E+K R Y++ G ++ GL R+D + + S
Sbjct: 227 QITHFVSDKELKTIMPKNEVKQRVYQLNEGQTLFFGGLARIDYVVGGKRPL--ICYFSNN 284
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVE-ELGKWVRKEFHVSGSSWDSSSVDIAA 501
L +H KTE A + G L PP + + + K VR E +G D+
Sbjct: 285 LKIHRTKTEKANDLWRNQLGSVLTPPSDPTQFDLDNVKAVRLE---TG----KEKRDVMI 337
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
AGLG+ ++ A + V + VD++LRN+++
Sbjct: 338 AGLGFITI--DAGAKVIVRVPKNVDVILRNSIM 368
>gi|418637114|ref|ZP_13199444.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis VCU139]
gi|374839804|gb|EHS03312.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis VCU139]
Length = 366
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 204/452 (45%), Gaps = 93/452 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q N PGY P NL
Sbjct: 7 CIGCGAPLQSENKNAPGYV--PEHNL---------------------------------- 30
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARS-VVLM 202
+ V+C RC L++Y +V+DV +++ DF L++ RS +++
Sbjct: 31 ------FREDVICRRCFRLKNYNEVQDVGMDS--EDF-------LNLLNGLSDRSGIIVN 75
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GSF + ++V GN +++LV K+DLLP ++ R
Sbjct: 76 VVDIFDFEGSFINALKRIV----------------GN-KKIILVANKLDLLPKQINHRRV 118
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+++ A++ G+ ++ +SA K WG++ L+ ++ +V+ +G N GKSTL
Sbjct: 119 KEWLKRSAKKYGLEA-EEVVLISAEKGWGIEDLLT-AINQNRDHDDVYIVGTTNVGKSTL 176
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N K ++ G EK++V T + PGTTL ++ + L + ++DTPG++ +
Sbjct: 177 IN---KLIELSVG----EKDVV---TTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQEH 224
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+T +T +E K + KE+K R Y++ ++ GL R+D + + S
Sbjct: 225 QMTHLVTEKELKTIIPKKEIKQRVYQLNESQTLFFGGLARIDYVSGGKRPL--ICFFSND 282
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H KTE A + + G L PP + + K+ DI +
Sbjct: 283 LNIHRTKTEKANELWKNQLGDLLTPP------NNVSNFNLKDIKAVRLETGKEKRDIMIS 336
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLG+ ++ A + V + VD+VLRN++L
Sbjct: 337 GLGFITI--DSGAKVIVRVPKNVDVVLRNSIL 366
>gi|373464479|ref|ZP_09556017.1| ribosome biogenesis GTPase YqeH [Lactobacillus kisonensis F0435]
gi|371762400|gb|EHO50931.1| ribosome biogenesis GTPase YqeH [Lactobacillus kisonensis F0435]
Length = 378
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 178/381 (46%), Gaps = 49/381 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V C RC LRHY ++ V+ L D DF + L S S S+++ VVD D +GS
Sbjct: 47 VYCQRCFRLRHYNEIAPVS----LSDDDF----LKLLTSISDTDSLIVYVVDIFDVNGSM 98
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V GN P ++LV K+D+LP+ L T+ + W+RQ+A
Sbjct: 99 IPGLHRFV----------------GNNP-ILLVGNKLDVLPARLKKTKVKDWLRQQANAA 141
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
GI + + +SA N + L+D + + +V+ +G N GKSTL+N+I +
Sbjct: 142 GIRPV-DVELISAKTNLDVDRLLDQIEKYRQGK-DVYVVGVTNVGKSTLINSIVR----- 194
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
+ I +T + PGTTL R++ L L DTPG++ P Q+ L +E
Sbjct: 195 -----QSTGIKELITTSRFPGTTLD--RIDIPLKDGKLLVDTPGIIQPEQMAHHLVGKEL 247
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
LV K +KP+ Y++ ++ G+ R D + TV+A L +H K ENA
Sbjct: 248 NLVTPQKRIKPKEYQLNPEQTLFFGGVARFDYNAGEGRRGF-TVYAENNLFIHRTKLENA 306
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
H G L PP E ++ +F ++ S D+ GLGW +V +G
Sbjct: 307 DDFYTNHVGSFLTPP-SEDDKDDFPPLEGHKFKITQKS------DLVIEGLGWITVP-EG 358
Query: 514 EAALGVWTYEGVDIVLRNALL 534
+ G W GV +++R A++
Sbjct: 359 VSVSG-WAPTGVSVLIRPAMI 378
>gi|328868001|gb|EGG16382.1| hypothetical protein DFA_09413 [Dictyostelium fasciculatum]
Length = 704
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 197/450 (43%), Gaps = 98/450 (21%)
Query: 152 KPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDG 211
K VC RCH L++YGKV + + P +F KL + VV+ VVD DF G
Sbjct: 280 KKEVCQRCHMLKNYGKVVPIKI----PVNEF----KSKLANIRNMNCVVIKVVDIMDFSG 331
Query: 212 SFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAR 271
+F +V GN P V++V K+D+LP+ + R E W+R+ +
Sbjct: 332 TFIEDFRHIV----------------GNNP-VIVVCNKMDVLPADIHKHRIEDWIRRECK 374
Query: 272 EDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG-NVWAIGAQNAGKSTLLNAI---- 326
G+ + +S+ G+ I ++ + +RG +V+ +G N GKST LNA+
Sbjct: 375 ARGMVA-AHVKLLSSASKEGITDFIVELEKI--RRGRDVFVVGCSNVGKSTFLNALVDEY 431
Query: 327 AKSVDAG-------------------------------RGGDGEEKNIVSHLTEAPVPGT 355
+ V+ G + + + K + S +T + PGT
Sbjct: 432 SNKVEFGDQQEEENGGKKKKNGKQEVKHKEAEPQETPEKEAERKRKLLASRVTTSIFPGT 491
Query: 356 TLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSI 415
TL ++ V L + LFDTPG+ +P+QI L EE K V K +KP + G S+
Sbjct: 492 TLNVISVP--LWNNSTLFDTPGVDNPSQIIKLLKPEELKAVIPTKRIKPSLVHMIEGKSL 549
Query: 416 HIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIG----E 471
+AGL R+D TV+ + LPLH+ +T+ A + ++ G+ L PPIG
Sbjct: 550 FLAGLARIDYSGGLAT---FTVYTNNNLPLHLCRTDKADALFQRQRGKMLCPPIGLENIN 606
Query: 472 KRVEELGKWVRKEFHVSGSSWDS---------------------SSVDIAAAGLGWFSVR 510
++ + +G +D + D+ +GLGW +++
Sbjct: 607 INNNNNNNYIESDIIGNGLVFDEKMDLSQLTKFSITPEQVDFKHTHTDLVISGLGWIAIK 666
Query: 511 LKGEAA----LGVWTYEGVDIVLRNALLPY 536
+ A L ++T + +D+ LR L+P+
Sbjct: 667 PLSKQAKPFKLSIYTPKFIDVSLRAPLVPF 696
>gi|227431108|ref|ZP_03913166.1| GTP-binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC
19254]
gi|227353148|gb|EEJ43316.1| GTP-binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC
19254]
Length = 379
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 194/455 (42%), Gaps = 99/455 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG LMQ + GY P L K +++E F
Sbjct: 20 CIGCGALMQVEDKDKIGYL--PMSALKK-------SISSEELF----------------- 53
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
C RC LRHY +++ V L D DF L S +++++ V
Sbjct: 54 ------------CQRCFRLRHYNEIQPVE----LTDDDF----ANLLHQISDTKALIVYV 93
Query: 204 VDAADFDGS----FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSP 259
+D D GS PR V K +N +++V K DLLP L+
Sbjct: 94 IDVFDVTGSAISGLPRFVGK-------DNP-------------ILVVANKADLLPKLLNK 133
Query: 260 TRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGK 319
R ++W+R + GI + + SA + L L+D + + R +V+ +G N GK
Sbjct: 134 NRLKNWLRTELKAQGIQPV-DVFLTSATRPKNLDDLLDTIDNFRDGR-DVFVVGVTNVGK 191
Query: 320 STLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLL 379
STL+N I KS R G I + +T + PGTTL R+E L +L DTPG++
Sbjct: 192 STLINQIIKS----RTG------IQNLITTSRFPGTTLD--RIEIPLEDGQQLIDTPGII 239
Query: 380 HPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWA 439
+Q+ LT ++ K E+KPRTY++ +I I GL R D + +I T +
Sbjct: 240 KRDQMAHVLTDKDLKFALPKNEIKPRTYQLNPEQTIFIGGLARFDFISGARSAI--TAYF 297
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
L LH K A E+H G L P +L ++ EF ++ S DI
Sbjct: 298 ENNLNLHRTKLIGADDFYEQHAGGLLVPA-----PSQLQNLIKHEFSITEDS------DI 346
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW SV G G W GV +++R A++
Sbjct: 347 VFSGLGWISVP-AGIKVAG-WAPTGVSVLIRKAMI 379
>gi|289550632|ref|YP_003471536.1| GTP-binding protein YqeH, possibly involved in replication
initiation [Staphylococcus lugdunensis HKU09-01]
gi|385784260|ref|YP_005760433.1| putative GTPase [Staphylococcus lugdunensis N920143]
gi|418413936|ref|ZP_12987152.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|289180164|gb|ADC87409.1| GTP-binding protein YqeH, possibly involved in replication
initiation [Staphylococcus lugdunensis HKU09-01]
gi|339894516|emb|CCB53797.1| putative GTPase [Staphylococcus lugdunensis N920143]
gi|410877574|gb|EKS25466.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 366
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 204/452 (45%), Gaps = 93/452 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q N PGY P NL
Sbjct: 7 CIGCGAPLQSENKNAPGYV--PEHNL---------------------------------- 30
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARS-VVLM 202
+ V+C RC L++Y +V+DV +++ DF L++ RS +++
Sbjct: 31 ------FREDVICRRCFRLKNYNEVQDVGMDS--EDF-------LNLLNGLSDRSGIIVN 75
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GSF + ++V GN +++LV K+DLLP ++ R
Sbjct: 76 VVDIFDFEGSFINALKRIV----------------GN-KKIILVANKLDLLPKQINHRRV 118
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+++ A++ G+ ++ +SA K WG++ L+ ++ +V+ +G N GKSTL
Sbjct: 119 KEWLKRSAKKYGLEA-EEVVLISAEKGWGIEDLLT-AINQNRDHEDVYIVGTTNVGKSTL 176
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N K ++ G EK++V T + PGTTL ++ + L + ++DTPG++ +
Sbjct: 177 IN---KLIELSVG----EKDVV---TTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQEH 224
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+T +T +E K + KE+K R Y++ ++ GL R+D + + S
Sbjct: 225 QMTHLVTEKELKTIIPKKEIKQRVYQLNESQTLFFGGLARIDYVSGGKRPL--ICFFSND 282
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H KTE A + + G L PP + + K+ DI +
Sbjct: 283 LNIHRTKTEKANELWKNQLGDLLTPP------NNVSNFNLKDIKAVRLETGKEKRDIMIS 336
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLG+ ++ A + V + VD+VLRN++L
Sbjct: 337 GLGFITI--DSGAKVIVRVPKNVDVVLRNSIL 366
>gi|395242556|ref|ZP_10419553.1| Ribosome biogenesis GTPase YqeH [Lactobacillus pasteurii CRBIP
24.76]
gi|394480288|emb|CCI85793.1| Ribosome biogenesis GTPase YqeH [Lactobacillus pasteurii CRBIP
24.76]
Length = 369
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 189/427 (44%), Gaps = 86/427 (20%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG +Q + GY P+ L K E+
Sbjct: 6 ICIGCGSRLQSEDVTKAGYL--PASALKKA---------------------------IED 36
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
E ++V C RC LRHY ++ V + N DF L S + +++++
Sbjct: 37 ERADV-------YCQRCFRLRHYNEIMPVELNN--DDF------LNLLNSLANKKALIVN 81
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF S + + V D +LV K DL P + +R
Sbjct: 82 VVDLFDFSNSILTSLKRFVGDND-----------------FILVGNKFDLFPKNSRQSRI 124
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+RQ A G+ ++ +SA K L LI+ ++ A +V+ +G N GKSTL
Sbjct: 125 KDWMRQEANRMGLYP-KEVFLISAAKQKYLDELIE-YLNKASTDRDVYFVGTTNVGKSTL 182
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + G+ K+++ T + PGTTL R+E L L DTPG++ N
Sbjct: 183 INAIIDKM-------GDIKDLI---TTSRFPGTTLD--RIEIPLDNGHFLVDTPGIMTKN 230
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ T L ++ LV+ K LKP TY++ G+++ + GL R+D + ES TV+
Sbjct: 231 QLATYLDAKDLALVSPKKPLKPATYQLLPGNTLFLGGLGRIDYVKG--ESTSFTVYVPRE 288
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+ +H K E A +KHFG L PP K ++L + KEF + S D+
Sbjct: 289 VYVHRTKLEKADEFYQKHFGEMLTPP---KTTKDLPEMKGKEFKTTYKS------DLLFG 339
Query: 503 GLGWFSV 509
G+G+ +V
Sbjct: 340 GIGFITV 346
>gi|326693253|ref|ZP_08230258.1| GTPase YqeH [Leuconostoc argentinum KCTC 3773]
Length = 379
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 189/451 (41%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+Q +P GY P L K
Sbjct: 20 CIGCGALIQVDDPNKSGYL--PMSALKKA------------------------------- 46
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ + E ++C RC LRHY +++ V L D DF L S R++++ V
Sbjct: 47 ---IDRDE--LLCQRCFRLRHYNEIQPVE----LTDDDF----ASLLHQISDTRALIVYV 93
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D D GS + + V G +++V K+DLLP L+ R +
Sbjct: 94 IDVFDVTGSEISSLPRFV----------------GQDNPILVVANKVDLLPKLLNKNRLK 137
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+W++ + GI K + SA L +L+ ++ +L R +V+ +G N GKSTL+
Sbjct: 138 NWLQAELKAQGI-KPVDIFLTSATHPQNLDALLAEIDELRAGR-DVFVVGVTNVGKSTLI 195
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K+ + +T + PGTTL R+E L L DTPG++ +Q
Sbjct: 196 NQIIKT----------STGVKDLITTSRFPGTTLD--RIEIPLSDGKHLIDTPGIIKRDQ 243
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
I L+ ++ K E+KPRTY++ ++ I GL R D E S E T + L
Sbjct: 244 IAHVLSDKDLKYALPKNEIKPRTYQLNPEQTLFIGGLARFDFE--SGERASFTAYFENNL 301
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K A EKH G L P K L V+ F + S DI AG
Sbjct: 302 NLHRTKLAGADAFYEKHVGTLLTP--APKTATPL---VKHTFKTTEKS------DIVFAG 350
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW SV + W +GV +++R A++
Sbjct: 351 LGWISV--PAGVQVSGWAPQGVSVLIRKAMI 379
>gi|238854460|ref|ZP_04644799.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 269-3]
gi|260665492|ref|ZP_05866339.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii SJ-7A-US]
gi|313471824|ref|ZP_07812316.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 1153]
gi|238832887|gb|EEQ25185.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 269-3]
gi|239530132|gb|EEQ69133.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 1153]
gi|260560760|gb|EEX26737.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii SJ-7A-US]
Length = 369
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 198/453 (43%), Gaps = 92/453 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q + G+ P+ LNK
Sbjct: 7 CIGCGAILQSEDENEAGFL--PASALNKA------------------------------- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ +K + C RC LRHY ++ V + N + R L S +++++ V
Sbjct: 34 ---LDGEDKEIYCKRCFRLRHYSEIMPVELNN--------NDFLRLLNSLGDKKALIVNV 82
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+ S + + V + +LV K+DL P + ++ +
Sbjct: 83 VDLFDFNNSLIPSLKRFVGNN-----------------DFILVGNKVDLFPLNSKESKIK 125
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ A G+ + +SA K L+ LI +D A + +V+ +G N GKSTL+
Sbjct: 126 DWMRQEANRMGLYP-KDIFLISAAKKRNLQDLIT-YLDQASQDQDVYFVGTTNVGKSTLI 183
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N+I + G+ K+++ T + PGTTL +++ L + L DTPG++ Q
Sbjct: 184 NSIIDLM-------GDVKDLI---TTSRFPGTTLDQIKIP--LDSGHYLVDTPGIMTEKQ 231
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + L ++ L+ K LKP TY++ +G ++ + GL R+D S TV+ + L
Sbjct: 232 LASYLNAKDLDLIAPKKPLKPATYQLNSGQTLFLGGLGRIDFISGKKTSF--TVYTARGL 289
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KT NA EKH G L PP G+ E L + +H + S D+ G
Sbjct: 290 YVHRTKTTNADDFYEKHVGDLLTPPHGD---ENLPAMKGQTYHPTTKS------DLLFGG 340
Query: 504 LGWFSVRLKGEAALGVWTY--EGVDIVLRNALL 534
+G+ +V A + V TY G+ +R AL+
Sbjct: 341 IGFITV----PAGVVVKTYLPGGIGQGIRRALI 369
>gi|261405558|ref|YP_003241799.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. Y412MC10]
gi|261282021|gb|ACX63992.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. Y412MC10]
Length = 375
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 185/382 (48%), Gaps = 46/382 (12%)
Query: 153 PVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS 212
PV+C RC +++Y + V V D D + R L G ++V+ +VD DF+GS
Sbjct: 40 PVICQRCFRIKNYNEASSVAV-------DQDEFL-RLLGQIGGKNALVIHIVDLFDFEGS 91
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + V GN P V+L V K DLLP + + +WV+++ +E
Sbjct: 92 LISGLQRFV----------------GNNP-VILAVNKTDLLPKVTNWNKVLNWVQKQCKE 134
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + + SA KN G + L++ V G R +V+ +GA N GKS+L+N + +
Sbjct: 135 HGL-RTEDIVLCSAKKNQGFERLLETVAHYRGDR-DVYVVGATNVGKSSLINRLIR---- 188
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
+ ++ LT + PGTTL +V + L + DTPG+++P + + ++RE+
Sbjct: 189 ------DYSDLDQELTVSRYPGTTLDMVNIP--LDDGRYIIDTPGIVYPWRYSELVSRED 240
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
V LKP Y++ G ++ G R D + +S T + S L +H K E
Sbjct: 241 LGTVMPENPLKPMVYQLNEGQTLFFGGFGRFDFLQGEHQSF--TCFISGRLGIHRTKLER 298
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A ++ +H G L PP E R+EEL +W R E + + D+ +GLGW + +
Sbjct: 299 ADSLFAEHAGELLSPPTKE-RLEELPEWTRHEIRIP----KGARQDVFISGLGWIKINGE 353
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
A + V +G+ ++ R +L+
Sbjct: 354 QGALVAVHVPKGIKVLSRPSLI 375
>gi|357010653|ref|ZP_09075652.1| YqeH [Paenibacillus elgii B69]
Length = 375
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 212/451 (47%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q P+ GY P+Q L +
Sbjct: 13 CAGCGVALQTEQPEQLGYV--PAQALART------------------------------- 39
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
P++C RC +++Y + +T+ DF R L G S+V+ +
Sbjct: 40 ---------PIICQRCFRIKNYNEASGITLNQ--DDF------LRLLTHVGGTDSLVVNI 82
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS +A+ V G P V+LVV KIDLLP + R
Sbjct: 83 VDIFDFEGSMISGLARFV----------------GTNP-VILVVNKIDLLPKVTNYNRIV 125
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+WV+++A+E G+ ++ ++ SA KN G + +I + ++L K +++ +GA N GKSTL+
Sbjct: 126 NWVQRQAKEAGL-RVVEVVLCSAKKNMGFERVI-EALELHRKGRDIYVVGATNVGKSTLI 183
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + + + ++ + LT + PGTTL +VR+ L A + DTPG+++ ++
Sbjct: 184 NRLIR----------DYSDLDAELTVSQYPGTTLDLVRIP--LDDGASIIDTPGIVYKHR 231
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+T +++++ V ++ +KP +++ +I L+R D + +S T + S L
Sbjct: 232 LTELVSKKDLMKVMPDRPIKPLVFQLNDQQTIFFGSLVRFDFVQGERQSF--TFYVSNAL 289
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
H K + A + E+H G L PP + +EEL K + + ++S+D++ +G
Sbjct: 290 QAHRTKLDRADELYEEHRGVLLSPPS-LEELEELPKLTKHPIRIP----KNASLDVSVSG 344
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGW V A L + +GV + +R +++
Sbjct: 345 LGWIKVNGTAGADLVIHVPKGVKVAVRESVI 375
>gi|418183293|ref|ZP_12819850.1| GTPase family protein [Streptococcus pneumoniae GA43380]
gi|353847722|gb|EHE27742.1| GTPase family protein [Streptococcus pneumoniae GA43380]
Length = 293
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 164/332 (49%), Gaps = 42/332 (12%)
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF+GS + + VS GN V+LV K D+LP S+ +
Sbjct: 4 VIDIFDFNGSVIPGLPRFVS---------------GN--DVLLVGNKKDILPKSVKSGKI 46
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+ +RA E+G+ + + SA +K +ID + R +V+ +G N GKSTL
Sbjct: 47 SQWLMKRAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTL 104
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+NAI + + ++N++ T + PGTTL ++E L + ++DTPG++H +
Sbjct: 105 INAIIQEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRH 152
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ LT + K V+ KE+KP+TY++ ++ + GL R D + T +
Sbjct: 153 QMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFITGEKQGF--TAFFDNE 210
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K E A +KH G L PP K E+ + V+ F + + D+ +
Sbjct: 211 LKLHRSKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVIS 263
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW +R+ G A + VW EGV +V R A++
Sbjct: 264 GLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 293
>gi|415692715|ref|ZP_11454635.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS03]
gi|315129875|gb|EFT85865.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS03]
Length = 366
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 203/402 (50%), Gaps = 58/402 (14%)
Query: 139 EAENETSEVKKHE---KPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-S 194
E +N+ V +H V+C RC L++Y +V+DV +E+ DF KL+S +
Sbjct: 17 EDKNKPGFVPEHNMFRDDVICRRCFRLKNYNEVQDVGLES--EDF-------LKLLSGLA 67
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
+ +V+ VVD F+GSF V ++V GN +++L K+DLLP
Sbjct: 68 DKKGIVVNVVDVFYFEGSFINAVKRIV----------------GN-KKIILAANKLDLLP 110
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
++ R + W+++ AR+ G+ + +SA K WG+ L+ + ++ + +V+ +G
Sbjct: 111 KQINKRRVKEWLKRTARKYGLEA-DDVVLISAEKGWGIDDLLSSIANIR-ENEDVYIVGT 168
Query: 315 QNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFD 374
N GKSTL+N K ++A G EK++V T + PGTTL ++ + L + ++D
Sbjct: 169 TNVGKSTLIN---KLIEASVG----EKDVV---TTSRFPGTTLDMIDIP--LDESSFMYD 216
Query: 375 TPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIY 434
TPG++ +Q+T ++ +E K++ KE+K R Y++ ++ GL R+D +
Sbjct: 217 TPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL- 275
Query: 435 VTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVE--ELGKWVRKEFHVSGSSW 492
+ S L +H KTE A + G L PP + + EL K VR E +G
Sbjct: 276 -VCFFSNDLNIHRTKTEKANDLWRNQLGDLLTPPGNPQNFDLNEL-KAVRLE---TG--- 327
Query: 493 DSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
D+ +GLG+ ++ A + V + VD+VLRN++L
Sbjct: 328 -KEKRDVMISGLGFITI--GPGAKVIVRVPKNVDVVLRNSIL 366
>gi|30022413|ref|NP_834044.1| GTP-binding protein YqeH [Bacillus cereus ATCC 14579]
gi|29897971|gb|AAP11245.1| GTP-binding protein [Bacillus cereus ATCC 14579]
Length = 358
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 189/423 (44%), Gaps = 88/423 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q N GY P+ +L K
Sbjct: 7 CIGCGVEIQTENKNEVGY--APASSLEK-------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L+HY +++DV+ L D DF R L + ++V+ +
Sbjct: 33 --------EQVICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGKSDALVVKI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V + +V+LV K DL+P S+ + +
Sbjct: 77 VDIFDFNGSWLPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
HW+R A++ G+ K + +SA K G+ L D + G + +V+ +G N GKST +
Sbjct: 120 HWMRYSAKQLGL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + K E +N++ T + PGTTL ++ + L ++ L+DTPG+++ +Q
Sbjct: 178 NRMIKEFS------DETENVI---TTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQ 226
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + ++ KL+ KE+KP +++ ++ +GL R D + T S L
Sbjct: 227 MAHYVGKQSLKLITPTKEIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRL 284
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H K E A + + H G L PP E+ + + + V+ EF++ D+ G
Sbjct: 285 TIHRTKLEKADELYKNHAGDLLSPPTPEE-LANMPELVKYEFNIR-----EPKTDVVFFG 338
Query: 504 LGW 506
LGW
Sbjct: 339 LGW 341
>gi|81429003|ref|YP_396003.1| GTP-binding protein YqeH [Lactobacillus sakei subsp. sakei 23K]
gi|78610645|emb|CAI55696.1| Putative GTP-binding protein [Lactobacillus sakei subsp. sakei 23K]
Length = 378
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 205/460 (44%), Gaps = 88/460 (19%)
Query: 76 EATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGL 135
+ T + C GCG +Q T+ + GY NS K GL
Sbjct: 6 QQTEEALFCIGCGAQIQTTDKEALGYT------------------------PNSALKKGL 41
Query: 136 VVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG 195
ET ++ C RC LRHY ++ D+ L D DF L++ G
Sbjct: 42 -------ETGQL-------YCQRCFRLRHYNEISDIK----LNDDDF-----LALLNQIG 78
Query: 196 -ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
+ ++++ VVD DF+GS + + + D V+LV K+D+LP
Sbjct: 79 DSDALIVNVVDIFDFNGSLIPGLHRFIGDNP-----------------VILVGNKVDILP 121
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
++L+P R +W+++ A+E G+ I + VSA K + L+ V++ K +V+ +G
Sbjct: 122 TALNPNRVINWIQKEAKEHGLHPIETM-LVSAKKGNSVDDLLA-VIERERKGRDVYVVGV 179
Query: 315 QNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFD 374
N GKSTL+N I K + +++ T + PGTTL + + + L D
Sbjct: 180 TNVGKSTLINRIIKQTGI------LDSDVI---TTSQFPGTTLDRIDIP-LYEDDHALID 229
Query: 375 TPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIY 434
TPG++H Q+ L ++ +L+ K++KP+ Y++ ++ + GL R D + +
Sbjct: 230 TPGIIHAQQMAHYLHDKDLRLIAPQKQIKPKVYQLNEQQTLFLGGLARFDYLQGPRHG-F 288
Query: 435 VTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDS 494
V + + L +H K ENA + G LQPP E + + R EF S
Sbjct: 289 VGYFDNE-LYIHRTKLENADNFYVRQLGDLLQPPHPED-LADFPDLQRYEFSTKEKS--- 343
Query: 495 SSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
D+ AGLGW + L + + +GV +++R AL+
Sbjct: 344 ---DLVFAGLGW--ITLPENVVVAGYAPKGVSVMIRKALI 378
>gi|452975135|gb|EME74954.1| GTPase YqeH [Bacillus sonorensis L12]
Length = 366
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 202/453 (44%), Gaps = 92/453 (20%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
VC GCGV +Q N GY P +L K
Sbjct: 5 VCIGCGVAIQTENKNELGY--APEASLLK------------------------------- 31
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVL 201
V+C RC L++Y +++DV+ L D DF K++ G S+++
Sbjct: 32 ---------DDVICQRCFRLKNYNEIQDVS----LTDDDF-----LKILHGIGETDSLIV 73
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
+VD DF+GS+ + + V G P ++L+ K D+LP S+ R
Sbjct: 74 KIVDIFDFNGSWINGLNRFV----------------GGNP-ILLIGNKADILPKSVKRER 116
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
HW+++ A+E G+ + L VSA + G+K I+ + + +V+ +G N GKST
Sbjct: 117 LVHWMKREAKELGLKPVDVL-LVSAGRGQGMKEAIEAIEHYRHGK-DVYVVGCTNVGKST 174
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
+N I K V G+G+ +T + PGTTL + + L + ++DTPG+++
Sbjct: 175 FINRIIKEV----SGEGDI------ITTSQYPGTTLDAIEIP--LDDGSSMYDTPGIINH 222
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q+ + + + K++ KELKPR +++ ++ GL R D S +
Sbjct: 223 HQMAHYVAKRDLKILTPKKELKPRNFQLNEQQTLFFGGLSRFDYISGGRSSF--VCYMPN 280
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L +H K ENA + EKH G L PP E+ ++ + V+ F + D+
Sbjct: 281 ELNIHRTKLENADELYEKHAGELLAPPAKEE-LDTFPELVKHTFTIK-----EPKTDVVF 334
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +V+ + + +GV + +R +L+
Sbjct: 335 SGLGWVTVQGANQRIVA-HAPKGVHVFVRRSLI 366
>gi|354806742|ref|ZP_09040222.1| ribosome biogenesis GTPase YqeH [Lactobacillus curvatus CRL 705]
gi|354514717|gb|EHE86684.1| ribosome biogenesis GTPase YqeH [Lactobacillus curvatus CRL 705]
Length = 377
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 184/382 (48%), Gaps = 50/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGS 212
+ C RC LRHY ++ D+ L D DF L++ G + ++++ VVD DF+GS
Sbjct: 45 LYCQRCFRLRHYNEISDIK----LNDDDF-----LALLNQIGDSDALIVNVVDIFDFNGS 95
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
+ + + D V+LV K+D+LPS+L+P + +W+++ A+E
Sbjct: 96 LIPGLHRFIGDNP-----------------VILVGNKVDILPSALNPNKVINWIQKEAKE 138
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + + VSA K + L+ V++ K +V+ +G N GKSTL+N I K
Sbjct: 139 HGLHPVETM-LVSAKKGNSVDELLA-VIERERKGRDVYVVGVTNVGKSTLINRIIKQTGI 196
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
+ +++ T + PGTTL + + + L DTPG++H Q+ L ++
Sbjct: 197 ------LDSDVI---TTSQFPGTTLDRIDIP-LYEDDHALIDTPGIMHAQQMAHYLHDKD 246
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
+L+ K +KP+ Y++ ++ + GL R D + + +V + + L +H K EN
Sbjct: 247 LRLIAPQKRIKPKVYQLNEQQTLFLGGLARFDFIQGARHG-FVGYFDNE-LYIHRTKLEN 304
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A K G LQPP E + + + R EF S D+ AGLGW + L
Sbjct: 305 ADQFYAKQLGDMLQPPHPED-LADFPELQRYEFSTKQKS------DLVFAGLGW--ITLP 355
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
+ + +GV +++R AL+
Sbjct: 356 ENVVVAGYAPKGVSVMIRKALI 377
>gi|319892654|ref|YP_004149529.1| GTP-binding protein YqeH [Staphylococcus pseudintermedius HKU10-03]
gi|317162350|gb|ADV05893.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Staphylococcus pseudintermedius HKU10-03]
Length = 366
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 204/453 (45%), Gaps = 95/453 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q +P+ PGY P +L K
Sbjct: 7 CIGCGATLQSDDPQKPGYV--PKTSLEK-------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLM 202
+ V+C RC L++Y +V+DV +E+ DF KL++ S +V+
Sbjct: 33 --------EDVICRRCFRLKNYNEVQDVGMES--DDF-------LKLLNGLSDKPGIVVN 75
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
+VD DF+GSF V ++V GN +++LV KIDLLP ++ R
Sbjct: 76 LVDVFDFEGSFIHAVKRIV----------------GN-KKIILVANKIDLLPKQINKRRV 118
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R+ A+E G+ + +SA K G+ L+ ++ +V+ +G N GKSTL
Sbjct: 119 SEWLRRLAKEYGLYP-EDVCLISAYKGIGIDGLLQ-TIEKHRNGQDVYIVGTTNVGKSTL 176
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N + + EKN+V T + +PGTTL ++ + + ++DTPG++ +
Sbjct: 177 INKLIEQTVG-------EKNVV---TTSRIPGTTLDMIDIP--IDDNHYMYDTPGIIQEH 224
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+T ++ + + KE+K R Y++ S+ I GL R+D + + + S
Sbjct: 225 QMTHYVSTKALNTIMPKKEIKQRVYQLNEAQSLFIGGLARVDYLKGGKRPL--VCYFSNE 282
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVE-ELGKWVRKEFHVSGSSWDSSSVDIAA 501
L +H K E A + K G L PP + R + E K VR + ++ DI
Sbjct: 283 LNIHRTKLEKADELWRKQIGTLLSPPSPKDRFDFEQLKTVR-------LTTENEKKDIMI 335
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLG+ +V A L V + V++ LR +++
Sbjct: 336 SGLGFVTV--DAGAELQVIVPQNVEVTLRPSIM 366
>gi|418322703|ref|ZP_12934017.1| ribosome biogenesis GTPase YqeH [Staphylococcus pettenkoferi
VCU012]
gi|365231150|gb|EHM72209.1| ribosome biogenesis GTPase YqeH [Staphylococcus pettenkoferi
VCU012]
Length = 368
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 207/464 (44%), Gaps = 117/464 (25%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q +PK PGY P NL +
Sbjct: 9 CIGCGAPLQSEDPKAPGYV--PEHNLFR-------------------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
VVC RC L+HY +V+DV +++ DF L + + + +V+ V
Sbjct: 35 --------DDVVCKRCFRLKHYNEVQDVGMDS--EDF------LNLLNTLADKKGIVVNV 78
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GSF V ++V GN +++L K+DLLP ++ R
Sbjct: 79 VDVFDFEGSFINAVKRIV----------------GN-KKIILAANKVDLLPKQINKNRVR 121
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R+ AR+ G+ + +SA N G++ LID ++ + +V+ +G N GKS+L+
Sbjct: 122 DWLRRTARKYGLDA-EAVVLLSAQHNKGIQDLID-AINKVRRNEDVYIVGTTNVGKSSLI 179
Query: 324 N-AIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
N I +SV EK++V T + PGTTL ++ + L + ++DTPG++ +
Sbjct: 180 NRLIEQSVG--------EKDVV---TTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDH 226
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+T +T EE K++ E+K R Y++ G ++ GL R+D S+ + S
Sbjct: 227 QMTHYVTPEELKIIIPKNEIKQRVYQLNEGQTLFFGGLARIDYVSGGRRSL--VCYFSNE 284
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSV----- 497
L +H KTE A + H G L PP S S +D S V
Sbjct: 285 LNIHRTKTEKADDLWHNHLGEMLTPP------------------TSASHFDLSQVKRVRL 326
Query: 498 -------DIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
D+ +GLG+ ++ + A + V + VD+VLR +++
Sbjct: 327 ETGKEKRDVMISGLGFITI--EAGAKVVVHVPKDVDVVLRKSIM 368
>gi|386319137|ref|YP_006015300.1| GTP-binding protein [Staphylococcus pseudintermedius ED99]
gi|323464308|gb|ADX76461.1| GTP-binding protein, putative [Staphylococcus pseudintermedius
ED99]
Length = 366
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 204/453 (45%), Gaps = 95/453 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q +P+ PGY P +L K
Sbjct: 7 CIGCGATLQSDDPQKPGYV--PKASLEK-------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLM 202
+ V+C RC L++Y +V+DV +E+ DF KL++ S +V+
Sbjct: 33 --------EDVICRRCFRLKNYNEVQDVGMES--DDF-------LKLLNGLSDKPGIVVN 75
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
+VD DF+GSF V ++V GN +++LV KIDLLP ++ R
Sbjct: 76 LVDVFDFEGSFIHAVKRIV----------------GN-KKIILVANKIDLLPKQINKRRV 118
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R+ A+E G+ + +SA K G+ L+ ++ +V+ +G N GKSTL
Sbjct: 119 SEWLRRLAKEYGLYP-EDVCLISAYKGIGIDGLLQ-TIEKHRNGQDVYIVGTTNVGKSTL 176
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N + + EKN+V T + +PGTTL ++ + + ++DTPG++ +
Sbjct: 177 INKLIEQTVG-------EKNVV---TTSRIPGTTLDMIDIP--IDDNHYMYDTPGIIQEH 224
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+T ++ + + KE+K R Y++ S+ I GL R+D + + + S
Sbjct: 225 QMTHYVSTKALNTIMPKKEIKQRVYQLNEAQSLFIGGLARVDYLKGGKRPL--VCYFSNE 282
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVE-ELGKWVRKEFHVSGSSWDSSSVDIAA 501
L +H K E A + K G L PP + R + E K VR + ++ DI
Sbjct: 283 LNIHRTKLEKADELWRKQIGTLLSPPSPKDRFDFEQLKTVR-------LTTENEKKDIMI 335
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLG+ +V A L V + V++ LR +++
Sbjct: 336 SGLGFVTV--DAGAELQVIVPQNVEVTLRPSIM 366
>gi|169350470|ref|ZP_02867408.1| hypothetical protein CLOSPI_01238 [Clostridium spiroforme DSM 1552]
gi|169292790|gb|EDS74923.1| ribosome biogenesis GTPase YqeH [Clostridium spiroforme DSM 1552]
Length = 365
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 198/405 (48%), Gaps = 53/405 (13%)
Query: 133 GGLVVFEAENETSEVKK---HEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRK 189
G ++ E ENE V K + V+C RC L++Y +++ NL D DF +
Sbjct: 11 GAVIQSEDENEIGFVPKKALNNDKVLCKRCFRLKNYHELQKT---NLTSD-DFLNI---- 62
Query: 190 LMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTK 249
L +V+ ++D D++GS + + +++ +++V K
Sbjct: 63 LQEIGNHDCLVVYLIDLFDYNGSLINGLPRHLNNND-----------------ILVVGNK 105
Query: 250 IDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNV 309
D+LP SL + HW+R++ +E GI + + S VKN+ L LI+ + + R +V
Sbjct: 106 RDILPKSLKDIKIIHWLRRQLKETGIKPVDVI-LSSGVKNYNLDLLINKINEYRHGR-DV 163
Query: 310 WAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQ 369
+ +G N GKS+L+NA+ K G + N++ T + PGTTL ++ + L
Sbjct: 164 YIVGVTNVGKSSLINALLKHYGTG------DNNLI---TTSEFPGTTLDLIEI--ALDDH 212
Query: 370 AKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESS 429
+ L+D+PG+++P+Q+ + E+ K + ELKP Y++ + S++ GL R D + +
Sbjct: 213 SYLYDSPGIINPHQMAHLVKDEDLKTIIPKNELKPINYQLDSNQSLYFGGLARFDFIKGN 272
Query: 430 VESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSG 489
S T + L +H K EN+ + +H L+P I E ++++ V +F +
Sbjct: 273 HSSF--TCYFPKSLKIHRTKLENSDGLYNRHL--TLKPEIEE--IKDIKDMVAYDFKLP- 325
Query: 490 SSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+ VD+ +GLG+ SV A + + +GV + +R AL+
Sbjct: 326 ----NYKVDLVISGLGFVSVNC-ANAKVKIHVPKGVGVFIREALI 365
>gi|70726319|ref|YP_253233.1| GTP-binding protein YqeH [Staphylococcus haemolyticus JCSC1435]
gi|68447043|dbj|BAE04627.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 366
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 203/452 (44%), Gaps = 93/452 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q + PGY P NL
Sbjct: 7 CIGCGAPLQSEDKSAPGYV--PEHNL---------------------------------- 30
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L++Y +++DV +++ DF L S + +++ V
Sbjct: 31 ------FREDVICQRCFRLKNYNEIQDVGMDS--EDF------LNLLNELSDRKGIIVNV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GSF + ++V GN +++L K+DLLP ++ R +
Sbjct: 77 VDIFDFEGSFINALKRIV----------------GN-KKIILAANKLDLLPKQINKRRVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+++ AR+ G+ + +SA K WG+ L+ + D + +V+ +G N GKSTL+
Sbjct: 120 DWLKKTARKYGLDA-DDVILISAQKGWGIDDLLTSI-DQNRNKQDVYIVGTTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N K ++ G EK++V T + PGTTL ++ + L + ++DTPG++ +Q
Sbjct: 178 N---KLIEQSVG----EKDVV---TTSRFPGTTLDLIDIP--LDEKTFMYDTPGIIQSHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+T ++ +E K + E+K R +++ G ++ GL R+D + + S L
Sbjct: 226 MTHYVSEKELKTIVPKNEIKQRVFQLNEGQTLFFGGLSRIDYVSGGKRPL--VCYFSNDL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELG-KWVRKEFHVSGSSWDSSSVDIAAA 502
+H KTE A + G L PP + K VR E +G DI +
Sbjct: 284 NIHRTKTEKANDLWRNQIGNVLTPPNNPDHFDMSDTKAVRLE---TG----KEKKDIMIS 336
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLG+ ++ + A + V + VD++LRN+++
Sbjct: 337 GLGFITI--EAGAKVIVRVPKNVDVILRNSIM 366
>gi|418026729|ref|ZP_12665523.1| GTP-binding protein [Streptococcus thermophilus CNCM I-1630]
gi|354694903|gb|EHE94534.1| GTP-binding protein [Streptococcus thermophilus CNCM I-1630]
Length = 272
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 152/291 (52%), Gaps = 25/291 (8%)
Query: 246 VVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGK 305
V K D+LP S+ + W+ +RA E+G+ + + SA + +K LI + L
Sbjct: 5 VGNKKDILPKSVKDGKVTQWLTERAHEEGMRPVDVM-LTSAQNHHAIKELIQRIEALRKG 63
Query: 306 RGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGV 365
R +V+ +G N GKSTL+NAI K + +K+++ T + PGTTL ++E
Sbjct: 64 R-DVYVVGVTNVGKSTLINAIIKEITG-------DKDVI---TTSRFPGTTLD--KIEIP 110
Query: 366 LPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV 425
L + +FDTPG++H +Q+ L+ ++ K V+ KE+KP+TY++ AG ++ + GL R D
Sbjct: 111 LDDGSYIFDTPGIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNAGQTLFLGGLGRFDF 170
Query: 426 EESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEF 485
+ + T + L LH K + A +KH G L PP G K + + K VR EF
Sbjct: 171 IDGDKQGF--TAFFDNNLKLHRTKLDGADAFYDKHVGSLLMPP-GPKELADFPKLVRHEF 227
Query: 486 HVSGSSWDSSSVDIAAAGLGWFSVRLKGE--AALGVWTYEGVDIVLRNALL 534
+ + D+ +GLGW V+ K + + EGV +V+R A++
Sbjct: 228 TIKDKT------DVVFSGLGWIRVQGKADQPTIVAACAPEGVGVVVRKAII 272
>gi|338730984|ref|YP_004660376.1| ribosome biogenesis GTPase YqeH [Thermotoga thermarum DSM 5069]
gi|335365335|gb|AEH51280.1| ribosome biogenesis GTPase YqeH [Thermotoga thermarum DSM 5069]
Length = 372
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 197/458 (43%), Gaps = 98/458 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
CPGCGV +Q + PGY P + K RK+
Sbjct: 3 CPGCGVELQHDDEYKPGYI--PLEAFKK-RKAE--------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
K ++C RC L+HY KVK V + D V L +V+ +
Sbjct: 33 -------GKEILCQRCFWLKHYRKVKPVRI---------DQNVLESLEKVVKESELVVWI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D +DF+GS+ ++ K+++ +V LVV KIDL+P ++
Sbjct: 77 IDISDFEGSYDERIKKLLARK-----------------KVALVVNKIDLIPKAVKIDEIR 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W++ D KI +SA KN+G+ SL K V +G N GKS++
Sbjct: 120 SWLKTCVNVDDFEKI---FLLSAEKNYGINSL----YRFLEKFNKVCFVGVTNVGKSSIF 172
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N ++ G++ + S +PGTTL I+ + + +Q K+FDTPGL+ +
Sbjct: 173 NKLS----------GKKATVTS------LPGTTLDIISAK-LKDSQTKIFDTPGLITSQR 215
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVE-ESSVESIYVTVWASPY 442
+ L E Q + K+L T++ + + + G+ + + E I+ +AS
Sbjct: 216 LMDFLPVECQAEIWAVKKLSRMTFKPDKDNVLFVGGMCVFEFDFEGPFRPIF-QFFASEK 274
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKR-VEELGKWVRKEFHVSGSSWDSSSVDIAA 501
+ H+ + EKH+G+ L PP + +E KWV + F + +++
Sbjct: 275 VKFHLTNITKKDQIWEKHYGKMLVPPCKSSQPSKEKVKWVERFFDLDIGQ------ELSI 328
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL-PYRS 538
AGLGW SVR +G + V E V + RNAL+ PYR+
Sbjct: 329 AGLGWLSVR-RGPFKVKVTLPETVLVKKRNALVNPYRN 365
>gi|374709075|ref|ZP_09713509.1| GTPase YqeH [Sporolactobacillus inulinus CASD]
Length = 366
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 198/453 (43%), Gaps = 96/453 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q +P+ GY KS L H
Sbjct: 6 CAGCGVKIQTEDPQALGY----------TPKSALQH------------------------ 31
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDV--TVENLLPDFDFDHTVGRKLMSASGARSVVL 201
P+VC RC L HY +V+DV T ++ L L S ++V+
Sbjct: 32 --------DPIVCQRCFRLAHYNEVQDVSLTADDFL----------TMLSKISEHDALVV 73
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
+VD D GS+ + + V G P V+LV K DL P S +P +
Sbjct: 74 YLVDLFDSAGSWVPGLQRFV----------------GGNP-VLLVGNKSDLFPKSTNPNK 116
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
W+R+ ARE G+ K + +SA KN GL + +D +V+ +GA N GKST
Sbjct: 117 LSSWIRRSAREQGL-KPVDVRLMSASKNHGLDE-VAAAIDHYRNGRDVYVVGATNVGKST 174
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
+N + + + G S +T + PGTTL + + L L+DTPG+++
Sbjct: 175 FINHLIQHLGTGD----------SAITTSRFPGTTLDFIEIP--LGDGGNLYDTPGIIND 222
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+Q + + K + KE+KP+ +++ ++ + GL R+D + S+ V+AS
Sbjct: 223 HQAAHFIDPRDLKKIMPVKEIKPKVFQLNERQTLFLGGLGRLDYIGPARRSL--IVYASS 280
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAA 501
L +H K E A + + G L PP EK +L R +F D D+
Sbjct: 281 SLVIHRTKMEQADDLYARQLGHLLTPP-SEK--VDLPPMERFDFRT-----DQEECDLVF 332
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLGW +++ +G A + + +G+ + LR++L+
Sbjct: 333 SGLGWITIKGQG-ARITAYAPKGIGVSLRSSLI 364
>gi|333395903|ref|ZP_08477720.1| GTPase YqeH [Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
gi|420146238|ref|ZP_14653668.1| GTP-binding protein [Lactobacillus coryniformis subsp. coryniformis
CECT 5711]
gi|398402054|gb|EJN55447.1| GTP-binding protein [Lactobacillus coryniformis subsp. coryniformis
CECT 5711]
Length = 373
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 195/455 (42%), Gaps = 96/455 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T+P GY P+ L K GL E
Sbjct: 11 CIGCGAQIQTTDPDAAGY--TPASALEK----------------------GLAAGE---- 42
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
V C RC LRHY ++ DV L D DF KL++ G ++++
Sbjct: 43 ----------VYCQRCFRLRHYNEISDVR----LTDDDF-----LKLLTQIGDTDALIVN 83
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF GS + + V G P V+LV K+D+LP S+ +
Sbjct: 84 VIDIFDFSGSIIPGLHRFV----------------GKNP-VLLVGNKVDVLPKSVKRGKV 126
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
HW++++A G+ + L SA + L L+ + R +V+ +G N GKSTL
Sbjct: 127 RHWLQEQAHAVGLRPLDVL-LTSAKSGYELDELLAAIDKYRAGR-DVYVVGVTNVGKSTL 184
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K + +T + PGTTL ++E L +L DTPG++H
Sbjct: 185 INQIIKRTTGTQ----------DLITTSRFPGTTLD--KIEIPLDDGHQLIDTPGIIHRE 232
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L ++ +LV K +KP+T+++ + ++ + GL R D E T++
Sbjct: 233 QMAYYLGPKDLRLVAPQKPIKPKTFQLNSEQTLFLGGLARFDYERGPHTGF--TLYLDNN 290
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKW---VRKEFHVSGSSWDSSSVDI 499
L +H K NA ++ G+ LQPP R EL + R +F S D+
Sbjct: 291 LLVHRTKLSNADDFYDRQAGKLLQPP----RPNELADFPPLARIQFTPKVKS------DL 340
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
AGLGW +V + W EGV + +R AL+
Sbjct: 341 VFAGLGWITV--PAGITVSGWAPEGVAVTMRPALI 373
>gi|228475982|ref|ZP_04060690.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis SK119]
gi|314936283|ref|ZP_07843630.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis subsp.
hominis C80]
gi|418619924|ref|ZP_13182735.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis VCU122]
gi|228269805|gb|EEK11285.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis SK119]
gi|313654902|gb|EFS18647.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis subsp.
hominis C80]
gi|374823487|gb|EHR87482.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis VCU122]
Length = 366
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 204/452 (45%), Gaps = 93/452 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q + PGY P NL
Sbjct: 7 CIGCGAPLQSEDKNAPGYV--PEHNL---------------------------------- 30
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L++Y +++DV +++ DF + L S + +++ V
Sbjct: 31 ------FRDDVICQRCFRLKNYNEIQDVGMDSE----DFLNL----LNGLSDRQGIIVNV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+GSF + ++V + +++L K+DLLP ++ R +
Sbjct: 77 IDVFDFEGSFINALKRIVGN-----------------KKIILAANKLDLLPRQINQRRVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+++ AR+ G+ ++ +SA K WG+ +L++ + + +V+ +G N GKSTL+
Sbjct: 120 EWLKRTARKYGLEA-EEVVLISAHKGWGIDALLESINRFRNHQ-DVYIVGTTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N K ++ G EK++V T + PGTTL ++ + L ++DTPG++ +Q
Sbjct: 178 N---KLIEQSVG----EKDVV---TTSRFPGTTLDMIDIP--LDENTFMYDTPGIIQAHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+T +T +E K++ E+K R +++ G ++ GL R+D + + S L
Sbjct: 226 MTHYVTEKELKVIIPRNEIKQRVFQLNEGQTLFFGGLARIDYVSGGKRPL--VCYFSNDL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIG-EKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+H KTE A + G L PP EK K VR E +G DI +
Sbjct: 284 NIHRTKTEKANDLWRNQIGHLLSPPSNPEKFNISDMKAVRLE---TG----KEKRDIMIS 336
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLG+ + L+ A + V + VD+VLR +++
Sbjct: 337 GLGFIT--LEAGAKVIVRVPKSVDVVLRQSIM 366
>gi|336394026|ref|ZP_08575425.1| GTPase YqeH [Lactobacillus coryniformis subsp. torquens KCTC 3535]
Length = 373
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 197/457 (43%), Gaps = 100/457 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T+P GY P+ L K GL E
Sbjct: 11 CIGCGAQIQTTDPAAAGY--TPASALEK----------------------GLAAGE---- 42
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLM 202
V C RC LRHY ++ DV L D DF KL++ G ++++
Sbjct: 43 ----------VYCQRCFRLRHYNEISDVR----LTDDDF-----LKLLTQIGDTDALIVN 83
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V+D DF GS + + V G P V+LV K+D+LP S+ +
Sbjct: 84 VIDIFDFSGSIIPGLHRFV----------------GKNP-VLLVGNKVDVLPKSVKRGKV 126
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
HW++++A G+ + L SA + L L+ + R +V+ +G N GKSTL
Sbjct: 127 RHWLQEQAHAVGLRPLDVL-LTSAKSGYELDELLAAIDKYRAGR-DVYVVGVTNVGKSTL 184
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I K + +T + PGTTL ++E L +L DTPG++H
Sbjct: 185 INQIIKRTTGTQ----------DLITTSRFPGTTLD--KIEIPLDDGHQLIDTPGIIHRE 232
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+ L ++ +LV K +KP+T+++ + ++ + GL R D E T++
Sbjct: 233 QMAYYLGPKDLRLVAPQKPIKPKTFQLNSEQTLFLGGLARFDYERGPHTGF--TLYLDNN 290
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKW---VRKEFHVSGSSWDSSSVDI 499
L +H K NA ++ G+ LQPP R EL + R +F S D+
Sbjct: 291 LLVHRTKLSNADDFYDRQAGKLLQPP----RPNELADFPPLARIQFTPKVKS------DL 340
Query: 500 AAAGLGWFSVRLKGEAALGV--WTYEGVDIVLRNALL 534
AGLGW +V A + V W EGV + +R AL+
Sbjct: 341 VFAGLGWITV----PAGITVSGWAPEGVAVTMRPALI 373
>gi|403339447|gb|EJY68983.1| hypothetical protein OXYTRI_10400 [Oxytricha trifallax]
Length = 874
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 196/411 (47%), Gaps = 54/411 (13%)
Query: 154 VVCARCHALRHYGKVKD---------VTVENLLPDFDFDHTVGRK--------LMSASGA 196
++C RCH L+H+ K+ D +L D VG+ ++S+
Sbjct: 442 LICQRCHNLKHHQKLIDHKGSLPSSYAGSTTVLADH-----VGKMDRQKILDGVLSSIYP 496
Query: 197 RSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSS 256
RS+++ V+D +F+GS ++ +++ D N+R R++LVV KID LP
Sbjct: 497 RSIIIKVIDITNFEGS---QIDEIIEDV---NQRRH---------RLILVVNKIDALPDG 541
Query: 257 LSPTRFEHWVRQRAREDGISKIT-KLHFVSAVKNWGLK------SLIDDVVDLAGKRGNV 309
S R + WV+ + KI + SA G+ S I D V
Sbjct: 542 FSVLRLQKWVKDQIDHKISDKIKYNICMTSARAATGVNKVMEILSFIKKEFDPQAYLPKV 601
Query: 310 WAIGAQNAGKSTLLNA-IAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPA 368
+ +G+ N+GKS+ +NA I KS K+ S LTE+ VPGTTL +V VE V
Sbjct: 602 YVVGSTNSGKSSFINAMIYKSNKHKEPNKIHYKSKYSILTESAVPGTTLEMVNVEDVRLG 661
Query: 369 QAKLFDTPGLLHPNQITTRLTREEQKLVNI--NKELKPRTYRIKAGHSIHIAGLMRMDVE 426
K DTPG+ + NQ+++ L + Q L+ + K++ +++G+S+ + GL R+D
Sbjct: 662 -FKFLDTPGVPNLNQVSS-LVEDYQDLITLLPQKQMMSYPLNMRSGYSVFLGGLARVDF- 718
Query: 427 ESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFH 486
S + Y T +P+L +H A + +K G L+P + K+++ E
Sbjct: 719 -LSGDDKYFTFIVAPHLTIHKTPILRAPDVFQKQAGNLLRPSYSAD--PDKVKFIQHEIG 775
Query: 487 VSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNA-LLPY 536
++ ++ ++ DI+ GLGWFS++ +G L + V +RN+ L+P+
Sbjct: 776 LNCDNFKEANFDISIEGLGWFSIQGRGFCNLMLHIPPEVKYHIRNSPLMPF 826
>gi|406671275|ref|ZP_11078514.1| ribosome biogenesis GTPase YqeH [Facklamia hominis CCUG 36813]
gi|405580525|gb|EKB54584.1| ribosome biogenesis GTPase YqeH [Facklamia hominis CCUG 36813]
Length = 374
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 184/426 (43%), Gaps = 86/426 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+Q +P GY P+ S F L+KG
Sbjct: 12 CIGCGALIQTESPDRFGYL--PA-----------------SAFKKGLEKGDFY------- 45
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
C RC LRHY ++ D+ ++ DF D KL + +++++ V
Sbjct: 46 ------------CQRCFRLRHYNELSDLELDE---DFFLD-----KLRKITDDQALIIHV 85
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D D +GS + +++ ++N ++++ K+DLLP S++ +R
Sbjct: 86 IDIFDIEGSLLTSLPRLL---GQDN--------------IIVIANKVDLLPKSVNRSRLT 128
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
HW+ Q R G+ K ++ S + G++ L++ + R +++ +G N GKSTLL
Sbjct: 129 HWLMQYIRSLGL-KPKQVILASGKQANGIEGLVEVINHFIQDR-DIYLVGITNVGKSTLL 186
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + + GGD E +H PGTTL ++R+ L + L DTPG + +Q
Sbjct: 187 NRLIQHY----GGDQEVITTSNH------PGTTLDLIRIP--LSEEYGLVDTPGFVKKDQ 234
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
L+R V K +KPR +++ ++ +AGL ++D E S + V Y
Sbjct: 235 WAHYLSRRSYGQVIPQKPIKPRVFQLNPKQTLFLAGLCQIDFVEGERTSFILNVANDLY- 293
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH K E A + H L PP ++R + +W V S D+ G
Sbjct: 294 -LHRSKLEKAADFYKAHCDDLLMPPTAKER-SLIPQWQAHHLTV------KSDQDLVIPG 345
Query: 504 LGWFSV 509
LGW +V
Sbjct: 346 LGWIAV 351
>gi|291000866|ref|XP_002683000.1| GTP-binding protein [Naegleria gruberi]
gi|284096628|gb|EFC50256.1| GTP-binding protein [Naegleria gruberi]
Length = 677
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 191/431 (44%), Gaps = 78/431 (18%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKL---MSASGARSVVLMVVDAADFD 210
+VC RCH LR+YG V V D R++ +S +++++ V+D D
Sbjct: 263 LVCQRCHQLRNYGVYSTVQV---------DQEAARQVFERISQLKKKALIIYVIDLFDTH 313
Query: 211 GSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLL----------------- 253
GS ++ G+ V++V K+DLL
Sbjct: 314 GSIIPNFKDII----------------GSHHNVLVVANKVDLLLKGRSSYDRRPDTEKER 357
Query: 254 PSSLSPTRFEHWVRQRARED--------GISKITKLHFVSAVKNWGLKSLIDDVVDLAGK 305
+L R E WVR+ ++D S++ + VS+ +K L + ++ K
Sbjct: 358 TKALIYRRLEEWVRRILKKDFELFLTTEERSQLVGIEVVSSTTGTNMKQL-HEKMNSYRK 416
Query: 306 RGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVR--VE 363
G+V+ IG N GKST +N + K R + NI +T + +PGTTL + +
Sbjct: 417 GGDVYVIGCTNVGKSTFINQLFKQQYESR-----KSNI--SITTSTLPGTTLKTISFPIT 469
Query: 364 GVLPAQAKLFDTPGLLHPNQ--ITTRLTREEQKLVNINKE-LKPRTYRIKAGHSIHIAGL 420
+A LFDTPG+L+ +Q T L E+ K + + + + PR R++ G ++GL
Sbjct: 470 TATGERANLFDTPGVLNQHQKLFTDYLKYEDWKYIIPDGDVIDPRFVRLRPGRCFFLSGL 529
Query: 421 MRMDVEESSVES-----IYVTVWASPYLPLHMGKTENACTMVEKHFGR------QLQPPI 469
R+D E +V++ +V+ S L +H E A EKH GR Q+ PPI
Sbjct: 530 FRLDYIEDNVQNEDWNRCIFSVFTSSRLSIHCTGIEKADEFYEKHVGRNATPEYQIVPPI 589
Query: 470 GEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVL 529
K G +F V+G++ S +DI G+GW S+ GE V T E V + L
Sbjct: 590 DGKDSLIYGLNKSLKFKVNGTTRRESILDICIGGIGWISITGVGEMTFEVHTNEHVQVYL 649
Query: 530 RN-ALLPYRSQ 539
R L+PY ++
Sbjct: 650 RQPCLMPYTTK 660
>gi|418035789|ref|ZP_12674231.1| hypothetical protein LDBUL1519_00931 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|354689355|gb|EHE89353.1| hypothetical protein LDBUL1519_00931 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 378
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 202/451 (44%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q + + PGY P+ L KV EN
Sbjct: 16 CIGCGAVLQSQDKQLPGYL--PASALAKV----------------------------ENG 45
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
E V C RC LRHY ++ V+++N DF L + + +++++ V
Sbjct: 46 ERE------EVYCQRCFRLRHYNEIMPVSLDN--DDF------LALLNTMAEKKALIVNV 91
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF S + + V +LV K+DL P + ++ +
Sbjct: 92 VDLFDFSNSLISSLKRFVGTN-----------------DFILVGNKLDLFPKNSKESKIK 134
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ A G+ + +SA K L +LID ++ + +V+ +G N GKSTL+
Sbjct: 135 DWMRQEANRMGLYP-KDIFLISAAKKKKLDTLID-YLNKHSQDQDVYFVGTTNVGKSTLI 192
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + G+ ++++ T + PGTTL ++E L L DTPG+L Q
Sbjct: 193 NAIIDEM-------GDVQDLI---TTSRFPGTTLD--QIEIPLDNGHFLVDTPGILTDKQ 240
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ +RL ++ L + K LKP TY++ G++I +AGL R+D + S T++A+ +
Sbjct: 241 LASRLDPKDLDLASPKKPLKPATYQLLPGNTIFLAGLGRIDYLKGPSTSF--TIYAARGM 298
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTE A +KH G L PP G +L +E+ + S D+ AG
Sbjct: 299 YIHRTKTEKADEFYQKHVGELLSPP-GPN--SDLPPLKGQEYSIKYRS------DVLFAG 349
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+G+ +V + +T G+ + R AL+
Sbjct: 350 VGFITV--PEGCVIKAYTPGGIGLGTRRALI 378
>gi|254736440|ref|ZP_05194146.1| GTP-binding protein YqeH [Bacillus anthracis str. Western North
America USA6153]
Length = 364
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 168/334 (50%), Gaps = 41/334 (12%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L+HY +++DV+ L D DF R L + ++V+ +VD DF+GS+
Sbjct: 35 VICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGKSDALVVKIVDIFDFNGSW 86
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + V + +V+LV K DL+P S+ + +HW+R A++
Sbjct: 87 LPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAKQL 129
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
G+ K + +SA K G+ L D + G + +V+ +G N GKST +N + K
Sbjct: 130 GL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFINRMIKEFS-- 185
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQ 393
E +N++ T + PGTTL ++ + L ++ L+DTPG+++ +Q+ + ++
Sbjct: 186 ----DETENVI---TTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQMAHYVGKQSL 236
Query: 394 KLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENA 453
KL+ KE+KP +++ ++ +GL R D + T S L +H K E A
Sbjct: 237 KLITPTKEIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKA 294
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHV 487
+ + H G L PP E+ +E + + V+ EF++
Sbjct: 295 DELYKNHAGDLLSPPTPEE-LENMPELVKYEFNI 327
>gi|300813180|ref|ZP_07093554.1| ribosome biogenesis GTPase YqeH [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300495838|gb|EFK30986.1| ribosome biogenesis GTPase YqeH [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 369
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 201/451 (44%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q + + PGY P+ L KV EN
Sbjct: 7 CIGCGAALQSQDKQLPGYL--PASALAKV----------------------------ENG 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
E V C RC LRHY ++ V+++N DF L + + +++++ V
Sbjct: 37 ERE------EVYCQRCFRLRHYNEIMPVSLDN--DDF------LALLNTMAEKKALIVNV 82
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF S + + V +LV K+DL P + ++ +
Sbjct: 83 VDLFDFSNSLISSLKRFVGTN-----------------DFILVGNKLDLFPKNSKESKIK 125
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ A G+ + +SA K L +LID ++ + +V+ +G N GKSTL+
Sbjct: 126 DWMRQEANRMGLYP-KDIFLISAAKKKNLDTLID-YLNKHSQDQDVYFVGTTNVGKSTLI 183
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + G+ ++++ T + PGTTL ++E L L DTPG+L Q
Sbjct: 184 NAIIDEM-------GDVQDLI---TTSRFPGTTLD--QIEIPLDNGHFLVDTPGILTDKQ 231
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ +RL ++ L + K LKP TY++ G++I +AGL R+D + S T++A+ +
Sbjct: 232 LASRLDPKDLDLASPKKPLKPATYQLLPGNTIFLAGLGRIDYLKGPSTSF--TIYAARGM 289
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTE A +KH G L PP G +L +E+ + S D+ AG
Sbjct: 290 YIHRTKTEKADEFYQKHVGELLSPP-GPN--SDLPPLKGQEYSIKYRS------DVLFAG 340
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+G+ +V + +T G+ + R AL+
Sbjct: 341 VGFITV--PEGCVIKAYTPGGIGLGTRRALI 369
>gi|385816103|ref|YP_005852494.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
gi|418028692|ref|ZP_12667246.1| hypothetical protein LDBUL1632_00040 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|325126140|gb|ADY85470.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
gi|354691530|gb|EHE91451.1| hypothetical protein LDBUL1632_00040 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 378
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 201/451 (44%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q + + PGY P+ L KV EN
Sbjct: 16 CIGCGAALQSQDKQLPGYL--PASALAKV----------------------------ENG 45
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
E V C RC LRHY ++ V+++N DF L + + +++++ V
Sbjct: 46 ERE------EVYCQRCFRLRHYNEIMPVSLDN--DDF------LALLNTMAEKKALIVNV 91
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF S + + V +LV K+DL P + ++ +
Sbjct: 92 VDLFDFSNSLISSLKRFVGTN-----------------DFILVGNKLDLFPKNSKESKIK 134
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ A G+ + +SA K L +LID ++ + +V+ +G N GKSTL+
Sbjct: 135 DWMRQEANRMGLYP-KDIFLISAAKKKKLDTLID-YLNKHSQDQDVYFVGTTNVGKSTLI 192
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + G+ ++++ T + PGTTL ++E L L DTPG+L Q
Sbjct: 193 NAIIDEM-------GDVQDLI---TTSRFPGTTLD--QIEIPLDNGHFLVDTPGILTDKQ 240
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ +RL ++ L + K LKP TY++ G++I +AGL R+D + S T++A+ +
Sbjct: 241 LASRLDPKDLDLASPKKPLKPATYQLLPGNTIFLAGLGRIDYLKGPSTSF--TIYAARGM 298
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTE A +KH G L PP G +L +E+ + S D+ AG
Sbjct: 299 YIHRTKTEKADEFYQKHVGELLSPP-GPN--SDLPPLKGQEYSIKYRS------DVLFAG 349
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+G+ +V + +T G+ + R AL+
Sbjct: 350 VGFITV--PEGCVIKAYTPGGIGLGTRRALI 378
>gi|104774345|ref|YP_619325.1| GTP-binding protein YqeH [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116514440|ref|YP_813346.1| GTP-binding protein YqeH [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|103423426|emb|CAI98299.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842]
gi|116093755|gb|ABJ58908.1| Predicted GTPase [Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
Length = 369
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 201/451 (44%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q + + PGY P+ L KV EN
Sbjct: 7 CIGCGAALQSQDKQLPGYL--PASALAKV----------------------------ENG 36
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
E V C RC LRHY ++ V+++N DF L + + +++++ V
Sbjct: 37 ERE------EVYCQRCFRLRHYNEIMPVSLDN--DDF------LALLNTMAEKKALIVNV 82
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF S + + V +LV K+DL P + ++ +
Sbjct: 83 VDLFDFSNSLISSLKRFVGTN-----------------DFILVGNKLDLFPKNSKESKIK 125
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ A G+ + +SA K L +LID ++ + +V+ +G N GKSTL+
Sbjct: 126 DWMRQEANRMGLYP-KDIFLISAAKKKKLDTLID-YLNKHSQDQDVYFVGTTNVGKSTLI 183
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + G+ ++++ T + PGTTL ++E L L DTPG+L Q
Sbjct: 184 NAIIDEM-------GDVQDLI---TTSRFPGTTLD--QIEIPLDNGHFLVDTPGILTDKQ 231
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ +RL ++ L + K LKP TY++ G++I +AGL R+D + S T++A+ +
Sbjct: 232 LASRLDPKDLDLASPKKPLKPATYQLLPGNTIFLAGLGRIDYLKGPSTSF--TIYAARGM 289
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTE A +KH G L PP G +L +E+ + S D+ AG
Sbjct: 290 YIHRTKTEKADEFYQKHVGELLSPP-GPN--SDLPPLKGQEYSIKYRS------DVLFAG 340
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+G+ +V + +T G+ + R AL+
Sbjct: 341 VGFITV--PEGCVIKAYTPGGIGLGTRRALI 369
>gi|313124180|ref|YP_004034439.1| ribosome biogenesis GTPase yqeh [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312280743|gb|ADQ61462.1| Ribosome biogenesis GTPase YqeH [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 369
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 200/451 (44%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q + + PGY P+ L KV E
Sbjct: 7 CIGCGAALQSQDKQLPGYL--PASALAKVENG---------------------------E 37
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
EV C RC LRHY ++ V+++N DF L + + +++++ V
Sbjct: 38 RDEV-------YCQRCFRLRHYNEIMPVSLDN--DDF------LALLNTMAEKKALIVNV 82
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF S + + V +LV K+DL P + ++ +
Sbjct: 83 VDLFDFSNSLISSLKRFVGTN-----------------DFILVGNKLDLFPKNSKESKIK 125
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ A G+ + +SA K L +LID ++ + +V+ +G N GKSTL+
Sbjct: 126 DWMRQEANRMGLYP-KDIFLISAAKKKNLDTLID-YLNKHSQDQDVYFVGTTNVGKSTLI 183
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + G+ ++++ T + PGTTL ++E L L DTPG+L Q
Sbjct: 184 NAIIDEM-------GDVQDLI---TTSRFPGTTLD--QIEIPLDNGHFLVDTPGILTDKQ 231
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ +RL ++ L + K LKP TY++ G++I +AGL R+D + S T++A+ +
Sbjct: 232 LASRLDPKDLDLASPKKPLKPATYQLLPGNTIFLAGLGRIDYLKGPSTSF--TIYAARGM 289
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTE A +KH G L PP G +L +E+ + S D+ AG
Sbjct: 290 YIHRTKTEKADEFYQKHVGELLSPP-GPN--SDLPPLKGQEYSIKYRS------DVLFAG 340
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+G+ +V + +T G+ + R AL+
Sbjct: 341 VGFITV--PEGCVIKAYTPGGIGLGTRRALI 369
>gi|56963402|ref|YP_175133.1| GTP-binding protein YqeH [Bacillus clausii KSM-K16]
gi|56909645|dbj|BAD64172.1| GTPase [Bacillus clausii KSM-K16]
Length = 372
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 191/435 (43%), Gaps = 92/435 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q +PK GY A ES +
Sbjct: 10 CSGCGVSIQTEDPKKLGY-------------------APESALKRDV------------- 37
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
VVC RC+ L+HY +++ V++ D DF S +++++ V
Sbjct: 38 ----------VVCKRCYRLKHYNEIEPVSIG----DEDFQAM----FASLHHKKALIVKV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF GS+ + V G P V+LV K+DLLP S + +
Sbjct: 80 VDVVDFYGSWISGAQRFV----------------GKNP-VLLVANKVDLLPKSTNRNKLT 122
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG-NVWAIGAQNAGKSTL 322
+W+++ A + G+ K ++ +S V G+ + + D+ +RG +V+ +G N GKS+
Sbjct: 123 NWLKKSASDLGL-KPLEVKLMSTVTGEGIDDVALTIDDM--RRGRDVYVVGCTNVGKSSF 179
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N I A G GE SH PGTTL ++ + L L DTPGL++ +
Sbjct: 180 INRIL----AMHGQTGEAMITTSHF-----PGTTLAMIDIP--LGDGKSLVDTPGLVNRH 228
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q L+ + K + KE+KP Y++K G ++ + GL R D + S V+ +
Sbjct: 229 QYAHLLSVKGLKEITPKKEIKPIVYQLKEGQTLFLGGLARFDFVKGPPSSF--IVYVANR 286
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H K E A + KH G L PP E E++ V+ F V +DI +
Sbjct: 287 LHIHRTKMEKADDLYSKHGGELLVPPYKEDG-EQVRPLVKHSFKVG-----KEPMDIVFS 340
Query: 503 GLGWFSVRLKGEAAL 517
GLGW +R++ E A+
Sbjct: 341 GLGW--IRIQTEGAI 353
>gi|422844094|ref|ZP_16890804.1| GTP-binding protein [Lactobacillus delbrueckii subsp. lactis DSM
20072]
gi|325685794|gb|EGD27867.1| GTP-binding protein [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 378
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 200/451 (44%), Gaps = 88/451 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q + + PGY P+ L KV E
Sbjct: 16 CIGCGAALQSQDKQLPGYL--PASALAKVENG---------------------------E 46
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
EV C RC LRHY ++ V+++N DF L + + +++++ V
Sbjct: 47 RDEV-------YCQRCFRLRHYNEIMPVSLDN--DDF------LALLNTMAEKKALIVNV 91
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF S + + V +LV K+DL P + ++ +
Sbjct: 92 VDLFDFSNSLISSLKRFVGTN-----------------DFILVGNKLDLFPKNSKESKIK 134
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+RQ A G+ + +SA K L +LID ++ + +V+ +G N GKSTL+
Sbjct: 135 DWMRQEANRMGLYP-KDIFLISAAKKKKLDTLID-YLNKHSQDQDVYFVGTTNVGKSTLI 192
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NAI + G+ ++++ T + PGTTL ++E L L DTPG+L Q
Sbjct: 193 NAIIDEM-------GDVQDLI---TTSRFPGTTLD--QIEIPLDNGHFLVDTPGILTDKQ 240
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ +RL ++ L + K LKP TY++ G++I +AGL R+D + S T++A+ +
Sbjct: 241 LASRLDPKDLDLASPKKPLKPATYQLLPGNTIFLAGLGRIDYLKGPSTSF--TIYAARGM 298
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTE A +KH G L PP G +L +E+ + S D+ AG
Sbjct: 299 YIHRTKTEKADEFYQKHVGELLSPP-GPN--SDLPPLKGQEYSIKYRS------DVLFAG 349
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+G+ +V + +T G+ + R AL+
Sbjct: 350 VGFITV--PEGCVIKAYTPGGIGLGTRRALI 378
>gi|339623958|ref|ZP_08659747.1| GTPase YqeH [Fructobacillus fructosus KCTC 3544]
Length = 388
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 199/465 (42%), Gaps = 97/465 (20%)
Query: 75 DEATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGG 134
+EA C GCG MQ T+ + GY P L K +S
Sbjct: 16 EEALQDGLYCIGCGARMQTTDQQEAGYL--PMSALQKQLES------------------- 54
Query: 135 LVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSAS 194
+ ++C RC LRHY +++ V+ L D DF + L S
Sbjct: 55 -----------------EQLLCQRCFRLRHYNEIQPVS----LTDDDFI----KLLHQVS 89
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
++++++ V+D DF GS + + V G + L+ K+DLLP
Sbjct: 90 ESKALIVYVLDLFDFSGSTIPGLPRFV----------------GQDNPIYLIGNKVDLLP 133
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
SL + + WVR + ++ GI + + SA L +++D + +L R +V+ +G
Sbjct: 134 KSLKANKIKDWVRGQLKDQGIKPVA-VDLTSAAHPANLDAILDKIDELRAGR-DVYVVGT 191
Query: 315 QNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFD 374
N GKSTL+N I KS + + +T + PGTTL + + L L D
Sbjct: 192 TNVGKSTLINQIIKS----------KTGVQELITTSRFPGTTLDQIAIP--LDDGRSLID 239
Query: 375 TPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES-I 433
TPG++ +Q ++T ++ K V E+K RTY++ G ++ I GL R D+ ++
Sbjct: 240 TPGIIKADQYAHQVTDKDLKYVLPKNEIKARTYQLNDGQTVFIGGLARFDLITGLEDAKT 299
Query: 434 YVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWD 493
VT + L LH K A EKH G L P + + G + EF
Sbjct: 300 GVTFYFENNLNLHRTKLVGADEFYEKHQGGLLTPV---PKSADSG-LISHEFKT------ 349
Query: 494 SSSVDIAAAGLGWFS----VRLKGEAALGVWTYEGVDIVLRNALL 534
++ D+ AGLG+ + V +KG A GV + LR A++
Sbjct: 350 KTAADLVIAGLGFITLPAGVTVKGYAPTGVSVF------LRKAMI 388
>gi|392972265|ref|ZP_10337657.1| ribosome biogenesis GTPase [Staphylococcus equorum subsp. equorum
Mu2]
gi|403046410|ref|ZP_10901879.1| GTP-binding protein YqeH [Staphylococcus sp. OJ82]
gi|392509978|emb|CCI60960.1| ribosome biogenesis GTPase [Staphylococcus equorum subsp. equorum
Mu2]
gi|402763106|gb|EJX17199.1| GTP-binding protein YqeH [Staphylococcus sp. OJ82]
Length = 366
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 127/453 (28%), Positives = 208/453 (45%), Gaps = 95/453 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q +P GY P NL
Sbjct: 7 CIGCGAPLQSEDPDAAGYV--PEHNL---------------------------------- 30
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
H + V+C RC L++Y +V+DV +++ DF L + + +V+ V
Sbjct: 31 ------HREDVICKRCFRLKNYNEVQDVGLDS--EDF------LNLLNGLADEKGIVVNV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GSF + ++V GN +++LV K+DLLP ++ R +
Sbjct: 77 VDVFDFEGSFINAIKRIV----------------GN-KKIILVANKLDLLPKQINKRRVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+++ AR+ G+ + + +SA KN G+ L+ + L NV+ +G N GKSTL+
Sbjct: 120 EWLKKTARKYGL-ETEDVVLISAEKNEGIDDLLASINTLRNN-DNVYIVGTTNVGKSTLI 177
Query: 324 NA-IAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
N I +SV EK++V T + PGTTL ++ + L + +FDTPG++ +
Sbjct: 178 NKLIERSVG--------EKDVV---TTSRFPGTTLDMIDIP--LDDTSFMFDTPGVIQEH 224
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+T +T +E K + KE+K R Y++ G ++ G+ R+D S+ S
Sbjct: 225 QMTHVVTDDELKTIMPKKEVKQRVYQLNEGQTLFFGGIARIDYVSGGRRSL--VCHFSNE 282
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVE-ELGKWVRKEFHVSGSSWDSSSVDIAA 501
L +H KTENA + + G L PP + + K VR E +G D+
Sbjct: 283 LNIHRTKTENANELWKNQLGALLSPPHNPDNFDLQNVKAVRLE---TG----KEKRDVMI 335
Query: 502 AGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLG+ ++ A + V + VD+VLRN+++
Sbjct: 336 SGLGFITI--DEGAKVIVRVPKNVDVVLRNSIM 366
>gi|239637592|ref|ZP_04678564.1| ribosome biogenesis GTPase YqeH [Staphylococcus warneri L37603]
gi|239596810|gb|EEQ79335.1| ribosome biogenesis GTPase YqeH [Staphylococcus warneri L37603]
Length = 366
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 205/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q + PGY P NL
Sbjct: 7 CIGCGAPLQSEDKNAPGYV--PEHNL---------------------------------- 30
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L++Y +V+DV +++ DF + L S +V+ V
Sbjct: 31 ------FREDVICKRCFRLKNYNEVQDVGMDSE----DFLNL----LTGLSDKSGIVVNV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GSF + ++V GN +++LV K+DLLP ++ R +
Sbjct: 77 VDVFDFEGSFINAIKRIV----------------GN-KKIILVANKMDLLPKQINHRRVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+++ A++ G+ + +SA K G++ L+D + + +V+ +G N GKSTL+
Sbjct: 120 EWLKRAAKKYGLEA-EDVVLISAEKGQGIEDLLDSINKYRDQE-DVYIVGTTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N K ++ G EK++V T + PGTTL ++ + L ++ +FDTPG++ +Q
Sbjct: 178 N---KLIELSVG----EKDVV---TTSRFPGTTLDMIDIP--LDEKSFMFDTPGIIQSHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+T +T +E KLV KE+K R Y++ G ++ GL R+D + + S L
Sbjct: 226 MTHFVTEKELKLVMPKKEIKQRVYQLNEGQTLFFGGLARIDYVSGGKRPL--VCFFSNEL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTE A + + H G L PP + ++ E D+ +G
Sbjct: 284 NIHRTKTEKANELWKNHIGDLLTPP------HDPSQFNMSEMKAVRLETGKEKRDVMISG 337
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LG+ ++ A + V + VD++LRN++L
Sbjct: 338 LGFITI--DSGAKVIVRVPKNVDVILRNSIL 366
>gi|295695837|ref|YP_003589075.1| ribosome biogenesis GTPase YqeH [Kyrpidia tusciae DSM 2912]
gi|295411439|gb|ADG05931.1| ribosome biogenesis GTPase YqeH [Kyrpidia tusciae DSM 2912]
Length = 363
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 196/457 (42%), Gaps = 97/457 (21%)
Query: 81 LTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEA 140
+ VC GCG +Q +P GY P+ ++
Sbjct: 1 MKVCSGCGEELQSEDPGKAGYV--PAHRID------------------------------ 28
Query: 141 ENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVV 200
E V+C RC+ + HY ++ V P + R A R++V
Sbjct: 29 ----------EPGVLCRRCYRIIHYQEIAPAAV----PPERLRGVLAR----AKQERALV 70
Query: 201 LMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPT 260
+ VVD D+ G+ ++ + +D A ER W LVV KIDLLP +
Sbjct: 71 VQVVDILDWTGT---RIPDL-NDVA--GERQW------------LVVHKIDLLPRETNYD 112
Query: 261 RFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKS 320
R W ++ R +G + +++ SA K G+ L+ DL G V+ +GA N GKS
Sbjct: 113 RVRRWFERQLRREGF-RAQRVYLASAHKGIGIPGLL---ADLNRVDGAVYFMGAANTGKS 168
Query: 321 TLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIV---RVEGVLPAQAKLFDTPG 377
+LLNA+ + E + LT + VPGTTL V R EG K DTPG
Sbjct: 169 SLLNALMGAA---------EISSDRPLTTSRVPGTTLNAVTIDRGEG-----RKWVDTPG 214
Query: 378 LLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTV 437
+ ++ RL + V + ++PR Y ++ G SI + GL R+DV E +
Sbjct: 215 ITAGYRVVDRLCPTCLRAVVPVQPIRPRVYSLETGQSIWLGGLARLDVLEGDRQPF--VC 272
Query: 438 WASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSV 497
+ S +P+H A EKH G+ L PP E+ + + R E+ + V
Sbjct: 273 FLSNRVPIHRTNVLRAQPFFEKHAGKDLVPPC-ERCLAGVMTMARTEWKLEA----GEKV 327
Query: 498 DIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
D+A AGLGW S R + A +G+ EGV+ LR AL+
Sbjct: 328 DLAVAGLGWVSARGR-VARVGLSVPEGVETELRPALV 363
>gi|295398703|ref|ZP_06808725.1| ribosome biogenesis GTPase YqeH [Aerococcus viridans ATCC 11563]
gi|294973056|gb|EFG48861.1| ribosome biogenesis GTPase YqeH [Aerococcus viridans ATCC 11563]
Length = 375
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 198/458 (43%), Gaps = 98/458 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q P GY P K +S L++
Sbjct: 9 CVGCGAEIQTDQPDKRGY--TPQSAYQKGIESGLLY------------------------ 42
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
C RC LRHY ++ V+ D + L + S ++++ V
Sbjct: 43 ------------CQRCFKLRHYNTLEKVSTSA-------DEFLA-ILNTLSEKDALIVNV 82
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D D GS + + +G P +++V K+D +P ++ R E
Sbjct: 83 IDIFDVAGSLINGLNRF----------------AGTNP-ILMVANKMDAIPKAVKHNRIE 125
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+W+R+ +++G+ K+ L SA K + L+ + ++ R +V+ IG N GKS+L+
Sbjct: 126 NWLRKYLKDNGV-KVDDLILTSAKKRANIDDLLAKIDEMRDGR-DVYVIGMANVGKSSLI 183
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRV-----EGVLPAQAKLFDTPGL 378
N I ++ G E +++ T + PGTTL ++ + EG +A L DTPG+
Sbjct: 184 NRILQAT-------GVEADVI---TTSQFPGTTLDLIDIPFDDAEG---NEASLIDTPGI 230
Query: 379 LHPNQITTRLTREEQKLVNI--NKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVT 436
++P Q+T L E ++LV+ NKE+KP T+++ ++ GL R+D E T
Sbjct: 231 INPGQMTAIL--EGKELVDALPNKEIKPVTFQLNPEQTLFFGGLARLDFIAG--ERTSFT 286
Query: 437 VWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSS 496
++ S + H K + + H G LQPP E V VRKEF + +
Sbjct: 287 LYMSGQIKPHRRKLAGSDEFYQAHLGGILQPPYPEN-VANFPGLVRKEFSI------KTP 339
Query: 497 VDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
DI GLGW SV + + +G+DI+ R L+
Sbjct: 340 TDIVFPGLGWVSV--SDPVQIVAYVPKGIDIITREKLI 375
>gi|384550424|ref|YP_005739676.1| GTPase family protein [Staphylococcus aureus subsp. aureus JKD6159]
gi|302333273|gb|ADL23466.1| GTPase family protein [Staphylococcus aureus subsp. aureus JKD6159]
Length = 366
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 197/384 (51%), Gaps = 55/384 (14%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLMVVDAADFDGS 212
V+C RC L++Y +V+DV +E+ DF KL+S + + +V+ VVD DF+GS
Sbjct: 35 VICRRCFRLKNYNEVQDVGLES--EDF-------LKLLSGLADKKGIVVNVVDVFDFEGS 85
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
F V ++V + +++L K+DLLP ++ R + W+++ AR+
Sbjct: 86 FINAVKRIVGNK-----------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + +SA K WG+ L+ + ++ + +V+ +G N GKSTL+N K ++A
Sbjct: 129 YGLEA-EDVVLISAEKGWGIDDLLSSIANIR-ENEDVYIVGTTNVGKSTLIN---KLIEA 183
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
G EK++V T + PGTTL ++ + L + ++DTPG++ +Q+T ++ +E
Sbjct: 184 SVG----EKDVV---TTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHLVSEKE 234
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K++ KE+K R Y++ ++ GL R+D + + S L +H KTEN
Sbjct: 235 LKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEN 292
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELG--KWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVR 510
A + G L PP G + +L K VR E +G D+ +GLG+ ++
Sbjct: 293 ANDLWRNQLGDLLTPP-GNPQNFDLNEVKAVRLE---TG----KEKRDVMISGLGFITI- 343
Query: 511 LKGEAALGVWTYEGVDIVLRNALL 534
A + V + VD+VLRN++L
Sbjct: 344 -GPGAKVIVRVPKNVDVVLRNSIL 366
>gi|403743307|ref|ZP_10952921.1| ribosome biogenesis GTPase YqeH [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122830|gb|EJY57022.1| ribosome biogenesis GTPase YqeH [Alicyclobacillus hesperidum
URH17-3-68]
Length = 409
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 189/450 (42%), Gaps = 94/450 (20%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
VC GCG +Q T+ PGY P + K
Sbjct: 15 VCLGCGAPLQSTDEDKPGYV--PESAVGK------------------------------- 41
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
V+C RC +RHYG+ VTV+ + T ++ +VL
Sbjct: 42 ---------PDVLCRRCFRIRHYGEFLPVTVD--------ESTYQAQVAQIFERPGLVLY 84
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD D GS +A+ V ++ V K+DLLP + TR
Sbjct: 85 VVDVFDLAGSLVPNLARFVLNSEVVVV-----------------VNKVDLLPERVQYTRL 127
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R++ + ++ + FVSA K G++ ++ +V+ +R V+ +G N GKSTL
Sbjct: 128 ADWIREQVERTRVP-VSDVLFVSAEKQLGIEQVLG-LVEWETER-PVYVVGMANTGKSTL 184
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGV-LPAQAKLFDTPGLLHP 381
LNAIA GR D + VS PGTTL + R+E + +L+DTPGL+H
Sbjct: 185 LNAIA-----GRLSDKKAPYTVSRR-----PGTTLALSRLEITGRHGRIELYDTPGLVHE 234
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
++ RL + ++V L+PR Y++ ++ + G++R+D E + I ++ +
Sbjct: 235 ARVIERLCVDCLRIVVPQSRLRPRVYQLNPEQTLFLGGIVRLDFERGDRQPI--VLYVAN 292
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQ-------PPIGEKRVEELGKWVRKEFHVSGS-SWD 493
LP+H K A + E+H LQ P +R L + R E GS +
Sbjct: 293 DLPVHRTKLSRADEIWERHQDDILQVPCAACRPDFANRRSIRLQRVRRGEPSARGSLAIS 352
Query: 494 SSSVDIAAAGLGWFSVR---LKGEAALGVW 520
DI GLGW ++ GE ++ W
Sbjct: 353 GRGSDIVIPGLGWIALSGRPFDGELSVPAW 382
>gi|401406948|ref|XP_003882923.1| Predicted GTPases (ISS), related [Neospora caninum Liverpool]
gi|325117339|emb|CBZ52891.1| Predicted GTPases (ISS), related [Neospora caninum Liverpool]
Length = 839
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 134/513 (26%), Positives = 221/513 (43%), Gaps = 60/513 (11%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRP------SQNLNKVRKSHLVHVANESEFSNSLKKGGLVV 137
CPGCG +Q +P G+ S + K+ V V +S+ G V+
Sbjct: 168 CPGCGAELQTEDPSRQGFVSAEKKEEWYSGRWKSLPKAKGVEV-------DSVPDGVEVI 220
Query: 138 FEAENETSEVKKHEKPVVCARCHALRHYGKVKDV------TVENLLPDFDFDHTVGRKLM 191
++ +K + ++C RC+ ++ Y ++ + LLP + TV ++
Sbjct: 221 ---TVKSPRFRKRTRLLLCRRCYRIQMYKQLDGQWEAAANAQDALLPSLE-PETVVNAIV 276
Query: 192 SASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKID 251
SVVL +VD D + S ++ ++ +S + V+ ++ +ID
Sbjct: 277 KTMKKDSVVLKLVDVCDLESSVVPEL--------------FQACRSKRL-HVIWLINRID 321
Query: 252 LLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSL-----------IDDVV 300
LP + + WVR+ R+ I VS+ G + L V
Sbjct: 322 CLPRTAQKREVKEWVRRMVRQIDNVHIDDCILVSSATGEGFEDLERRLEHLLVPAPGGVS 381
Query: 301 DLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIV 360
+ G+R ++ +G NAGKST + K ++ G K +T + +PGTTL +
Sbjct: 382 AVEGRR--IYVVGRVNAGKSTFVTRFLKFINYKHAGTIFMKRASGGVTRSAMPGTTLSFL 439
Query: 361 RVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNI--NKELKPRTYRIKAGHSIHIA 418
LP KL DTPG+ +Q+T+ L R L +I +K L+P TY + G S+ I
Sbjct: 440 PFG--LPKDFKLIDTPGIPSRHQVTS-LLRFAADLYSIVPSKRLQPITYAVTEGKSLLIG 496
Query: 419 GLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELG 478
+ R+D+ + S + +T + S + LH+ KT A ++ + L PP + L
Sbjct: 497 AMARIDLAQGS--TALITCYFSHKITLHICKTVKAADLLSRKACTFLYPPHLPAGFDRLQ 554
Query: 479 KWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVR-LKGEAALGVWTYEGVDIVLRNALLPYR 537
VR V + ++ DI+ AGLGW SV G L VW +GV I R A+LP +
Sbjct: 555 PLVRHSVKVHAGN-STAYDDISIAGLGWISVAGAAGPKELHVWAPQGVKIFRRPAMLPLQ 613
Query: 538 SQVFEVAGFTVSKIISKADQSLNKSKRLNEAKR 570
+ V F ++ + K KR+ EA R
Sbjct: 614 IRTTGVEDFHGKSPRARGPRINAKKKRMVEALR 646
>gi|258511984|ref|YP_003185418.1| ribosome biogenesis GTPase YqeH [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478710|gb|ACV59029.1| ribosome biogenesis GTPase YqeH [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 396
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 184/434 (42%), Gaps = 93/434 (21%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
VC GCG +Q T+ + PGY V +SHL E E+
Sbjct: 6 VCVGCGAPLQSTDERMPGY----------VPESHL---------------------ERED 34
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
V+C RC +RHYG + V+ + T R++ + +VL
Sbjct: 35 -----------VLCRRCFRIRHYGDFTPIAVD--------EETYQRQVAAIFDRPGLVLY 75
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD D GS + V+ + V++VV K+DLLP+ +
Sbjct: 76 VVDVFDLAGSLIPSARRFVASSD-----------------VIVVVNKVDLLPTDVGYEAL 118
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R R G+ + + F+SA K G+ L+D V + V+ IG N GKSTL
Sbjct: 119 ADWIRGEVRATGVEPL-DVAFISAEKRRGVDRLVDRVARETKR--PVYVIGMANVGKSTL 175
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP-AQAKLFDTPGLLHP 381
LNA+ + + E K T + PGTTL + R+E P + +LFDTPGL++
Sbjct: 176 LNAMVERLS-------ERKQ---PFTVSRRPGTTLAMSRLEIEGPYGRVELFDTPGLMYT 225
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+++ RL + K V ++PR Y++ G ++ + GL+R+ E E + ++ S
Sbjct: 226 SRVIERLCGDCLKWVVPRTRVRPRVYQLNPGQALFLGGLVRL--ETLGGERQGIVLYVSN 283
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPP-------IGEKRVEELGKWVRKEFHVSGSSWDS 494
LP+H K E A H L+ P ++R + R++ + S
Sbjct: 284 ELPVHRTKRERADQFFADHRYDILKVPCEACADAFADRRSWLVAAPPRRD---ADFSLGK 340
Query: 495 SSVDIAAAGLGWFS 508
DI GLGW +
Sbjct: 341 RGGDIVLPGLGWIA 354
>gi|417643756|ref|ZP_12293785.1| ribosome biogenesis GTPase YqeH [Staphylococcus warneri VCU121]
gi|445059504|ref|YP_007384908.1| GTPase YqeH [Staphylococcus warneri SG1]
gi|330685473|gb|EGG97127.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU121]
gi|443425561|gb|AGC90464.1| GTPase YqeH [Staphylococcus warneri SG1]
Length = 366
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 205/451 (45%), Gaps = 91/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q + PGY P NL
Sbjct: 7 CIGCGAPLQSEDKNAPGYV--PEHNL---------------------------------- 30
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L++Y +V+DV +++ DF + L S + +V+ V
Sbjct: 31 ------FREDVICKRCFRLKNYNEVQDVGMDS----DDFLNL----LTGLSDKKGIVVNV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GSF + ++V GN +++LV K+DLLP ++ R +
Sbjct: 77 VDVFDFEGSFINAIKRIV----------------GN-KKIILVANKMDLLPKQINHRRVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+++ A++ G+ + +SA K G++ L+ + + +V+ +G N GKSTL+
Sbjct: 120 EWLKRAAKKYGLEA-EDVVLISAEKGQGIEDLLYSINKYRDQE-DVYIVGTTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N K ++ G EK++V T + PGTTL ++ + L ++ +FDTPG++ +Q
Sbjct: 178 N---KLIELSVG----EKDVV---TTSRFPGTTLDMIDIP--LDEKSFMFDTPGIIQSHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+T +T +E KL+ KE+K R Y++ G ++ GL R+D + + S L
Sbjct: 226 MTHFVTEKELKLIMPKKEIKQRVYQLNEGQTLFFGGLARIDYVSGGKRPL--ICFFSNEL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTE A + + H G L PP + ++ E D+ +G
Sbjct: 284 NIHRTKTEKANELWKNHIGDLLTPP------HDPSQFNMSEMKAVRLETGKEKRDVMISG 337
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LG+ ++ A + V + VD++LRN++L
Sbjct: 338 LGFITI--DAGAKVIVRVPKNVDVILRNSIL 366
>gi|418321301|ref|ZP_12932647.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VCU006]
gi|418875536|ref|ZP_13429792.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC93]
gi|421148523|ref|ZP_15608183.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|443639852|ref|ZP_21123852.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21196]
gi|365225533|gb|EHM66776.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VCU006]
gi|377769608|gb|EHT93376.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC93]
gi|394331666|gb|EJE57749.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|443406127|gb|ELS64711.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21196]
Length = 366
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 202/402 (50%), Gaps = 58/402 (14%)
Query: 139 EAENETSEVKKHE---KPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-S 194
E +N+ V +H V+C RC L++Y +V+DV +E+ DF KL+S +
Sbjct: 17 EDKNKPGFVPEHNMFRDDVICRRCFRLKNYNEVQDVGLES--EDF-------LKLLSGLA 67
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
+ +V+ VVD DF+GSF V ++V + +++L K+DLLP
Sbjct: 68 DKKGIVVNVVDVFDFEGSFINAVKRIVGNK-----------------KIILAANKLDLLP 110
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
++ R + W+++ AR+ G+ + +SA K WG+ L+ + ++ +V+ +G
Sbjct: 111 KQINKRRVKEWLKRTARKYGLEA-DDVVLISAEKGWGIDDLLSSIANIRDNE-DVYIVGT 168
Query: 315 QNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFD 374
N GKSTL+N K ++A G EK++V T + PGTTL ++ + L + ++D
Sbjct: 169 TNVGKSTLIN---KLIEASVG----EKDVV---TTSRFPGTTLDMIDIP--LDESSFMYD 216
Query: 375 TPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIY 434
TPG++ +Q+T ++ +E K++ KE+K R Y++ ++ GL R+D +
Sbjct: 217 TPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL- 275
Query: 435 VTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELG--KWVRKEFHVSGSSW 492
+ S L +H KTE A + G L PP G + +L K VR E +G
Sbjct: 276 -VCFFSNDLNIHRTKTEKANDLWRNQLGDLLTPP-GNPQNFDLNEIKAVRLE---TG--- 327
Query: 493 DSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
D+ +GLG+ ++ A + V + VD+VLRN++L
Sbjct: 328 -KEKRDVMISGLGFITI--GPGAKVIVRVPKNVDVVLRNSIL 366
>gi|418318528|ref|ZP_12929930.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21232]
gi|365242991|gb|EHM83686.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21232]
Length = 366
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 197/384 (51%), Gaps = 55/384 (14%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLMVVDAADFDGS 212
V+C RC L++Y +V+DV +E+ DF KL+S + + +V+ VVD DF+GS
Sbjct: 35 VICRRCFRLKNYNEVQDVGLES--EDF-------LKLLSGLADKKGIVVNVVDVFDFEGS 85
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
F V ++V GN +++L K+DLLP ++ R + W+++ AR+
Sbjct: 86 FINAVKRIV----------------GN-KKIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + +SA K WG+ L+ + ++ + +V+ +G N GKSTL+N K ++A
Sbjct: 129 YGLEA-DDVVLISAEKGWGIDDLLSSIANIR-ENEDVYIVGTTNVGKSTLIN---KLIEA 183
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
G EK++V T + PGTTL ++ + L + ++DTPG++ +Q+T ++ +E
Sbjct: 184 SVG----EKDVV---TTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHLVSEKE 234
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K++ KE+K R Y++ ++ GL R+D + + S L +H KTE
Sbjct: 235 LKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEK 292
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELG--KWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVR 510
A + G L PP G + +L K VR E +G D+ +GLG+ ++
Sbjct: 293 ANDLWRNQLGDLLTPP-GNSQNFDLNEVKAVRLE---TG----KEKRDVMISGLGFITI- 343
Query: 511 LKGEAALGVWTYEGVDIVLRNALL 534
A + V + VD+VLRN++L
Sbjct: 344 -GPGAKVIVRVPKNVDVVLRNSIL 366
>gi|387143202|ref|YP_005731595.1| putative GTPase [Staphylococcus aureus subsp. aureus TW20]
gi|418276913|ref|ZP_12891667.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21178]
gi|418955584|ref|ZP_13507521.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-189]
gi|269941085|emb|CBI49470.1| putative GTPase [Staphylococcus aureus subsp. aureus TW20]
gi|365173896|gb|EHM64325.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21178]
gi|375370670|gb|EHS74468.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-189]
Length = 366
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 197/384 (51%), Gaps = 55/384 (14%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLMVVDAADFDGS 212
V+C RC L++Y +V+DV +E+ DF KL+S + + +V+ VVD DF+GS
Sbjct: 35 VICRRCFRLKNYNEVQDVGLES--EDF-------LKLLSGLADKKGIVVNVVDVFDFEGS 85
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
F V ++V GN +++L K+DLLP ++ R + W+++ AR+
Sbjct: 86 FINAVKRIV----------------GN-KKIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + +SA K WG+ L+ + ++ + +V+ +G N GKSTL+N K ++A
Sbjct: 129 YGLEA-DDVVLISAEKGWGIDDLLSSIANIR-ENEDVYTVGTTNVGKSTLIN---KLIEA 183
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
G EK++V T + PGTTL ++ + L + ++DTPG++ +Q+T ++ +E
Sbjct: 184 SVG----EKDVV---TTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHLVSEKE 234
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K++ KE+K R Y++ ++ GL R+D + + S L +H KTE
Sbjct: 235 LKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEK 292
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELG--KWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVR 510
A + G L PP G + +L K VR E +G D+ +GLG+ ++
Sbjct: 293 ANDLWRNQLGDLLTPP-GNPQNFDLNEVKAVRLE---TG----KEKRDVMISGLGFITI- 343
Query: 511 LKGEAALGVWTYEGVDIVLRNALL 534
A + V + VD+VLRN++L
Sbjct: 344 -GPGAKVIVRVPKNVDVVLRNSIL 366
>gi|15924587|ref|NP_372121.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus Mu50]
gi|15927177|ref|NP_374710.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus N315]
gi|148268080|ref|YP_001247023.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus JH9]
gi|150394149|ref|YP_001316824.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus JH1]
gi|156979915|ref|YP_001442174.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus Mu3]
gi|253315366|ref|ZP_04838579.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|255006382|ref|ZP_05144983.2| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257793673|ref|ZP_05642652.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9781]
gi|258411028|ref|ZP_05681308.1| nitric oxide synthase [Staphylococcus aureus A9763]
gi|258420169|ref|ZP_05683124.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9719]
gi|258437428|ref|ZP_05689412.1| nitric-oxide synthase [Staphylococcus aureus A9299]
gi|258443634|ref|ZP_05691973.1| GTP-binding protein YqeH [Staphylococcus aureus A8115]
gi|258446842|ref|ZP_05694996.1| nitric-oxide synthase [Staphylococcus aureus A6300]
gi|258448756|ref|ZP_05696868.1| nitric-oxide synthase [Staphylococcus aureus A6224]
gi|258453573|ref|ZP_05701551.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A5937]
gi|269203224|ref|YP_003282493.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus ED98]
gi|282893098|ref|ZP_06301332.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8117]
gi|282928230|ref|ZP_06335835.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A10102]
gi|295406720|ref|ZP_06816525.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8819]
gi|296276599|ref|ZP_06859106.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus MR1]
gi|297245698|ref|ZP_06929563.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8796]
gi|384864817|ref|YP_005750176.1| GTPase [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|387150740|ref|YP_005742304.1| GTP-binding protein YqeH, possibly involved in replication
initiation [Staphylococcus aureus 04-02981]
gi|417650984|ref|ZP_12300747.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21172]
gi|417802923|ref|ZP_12449973.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21318]
gi|417894287|ref|ZP_12538306.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21201]
gi|418424745|ref|ZP_12997859.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS1]
gi|418427739|ref|ZP_13000744.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS2]
gi|418430582|ref|ZP_13003492.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS3a]
gi|418433724|ref|ZP_13006316.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS4]
gi|418437219|ref|ZP_13009015.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS5]
gi|418440119|ref|ZP_13011820.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS6]
gi|418443137|ref|ZP_13014736.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS7]
gi|418446201|ref|ZP_13017674.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS8]
gi|418449215|ref|ZP_13020600.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS9]
gi|418452026|ref|ZP_13023360.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS10]
gi|418455020|ref|ZP_13026279.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418457898|ref|ZP_13029097.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418567012|ref|ZP_13131377.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21272]
gi|418640343|ref|ZP_13202575.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-3]
gi|418652879|ref|ZP_13214842.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-99]
gi|418660818|ref|ZP_13222430.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-122]
gi|418878514|ref|ZP_13432749.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1165]
gi|418881280|ref|ZP_13435497.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1213]
gi|418884129|ref|ZP_13438322.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1769]
gi|418886861|ref|ZP_13441009.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1150]
gi|418895359|ref|ZP_13449454.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1057]
gi|418914698|ref|ZP_13468669.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|418920677|ref|ZP_13474609.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC348]
gi|418931901|ref|ZP_13485736.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1750]
gi|418991524|ref|ZP_13539185.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1096]
gi|419784691|ref|ZP_14310454.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-M]
gi|424768942|ref|ZP_18196179.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CM05]
gi|443637575|ref|ZP_21121650.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21236]
gi|13701395|dbj|BAB42689.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14247368|dbj|BAB57759.1| similar to GTPase family protein [Staphylococcus aureus subsp.
aureus Mu50]
gi|147741149|gb|ABQ49447.1| Nitric-oxide synthase [Staphylococcus aureus subsp. aureus JH9]
gi|149946601|gb|ABR52537.1| Nitric-oxide synthase [Staphylococcus aureus subsp. aureus JH1]
gi|156722050|dbj|BAF78467.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|257787645|gb|EEV25985.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9781]
gi|257840178|gb|EEV64642.1| nitric oxide synthase [Staphylococcus aureus A9763]
gi|257843880|gb|EEV68274.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9719]
gi|257848633|gb|EEV72621.1| nitric-oxide synthase [Staphylococcus aureus A9299]
gi|257851040|gb|EEV74983.1| GTP-binding protein YqeH [Staphylococcus aureus A8115]
gi|257854417|gb|EEV77366.1| nitric-oxide synthase [Staphylococcus aureus A6300]
gi|257858034|gb|EEV80923.1| nitric-oxide synthase [Staphylococcus aureus A6224]
gi|257864304|gb|EEV87054.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A5937]
gi|262075514|gb|ACY11487.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus ED98]
gi|282590037|gb|EFB95119.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A10102]
gi|282764416|gb|EFC04542.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8117]
gi|285817279|gb|ADC37766.1| GTP-binding protein YqeH, possibly involved in replication
initiation [Staphylococcus aureus 04-02981]
gi|294968467|gb|EFG44491.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8819]
gi|297177349|gb|EFH36601.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8796]
gi|312829984|emb|CBX34826.1| GTPase of unknown function family protein [Staphylococcus aureus
subsp. aureus ECT-R 2]
gi|329727168|gb|EGG63624.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21172]
gi|334273571|gb|EGL91914.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21318]
gi|341852432|gb|EGS93321.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21201]
gi|371982716|gb|EHO99864.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21272]
gi|375014907|gb|EHS08578.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-3]
gi|375021047|gb|EHS14554.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-99]
gi|375040058|gb|EHS32964.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-122]
gi|377694636|gb|EHT19001.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1165]
gi|377695165|gb|EHT19529.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1057]
gi|377713079|gb|EHT37292.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1750]
gi|377714464|gb|EHT38665.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1769]
gi|377723646|gb|EHT47771.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1096]
gi|377725814|gb|EHT49927.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1150]
gi|377731023|gb|EHT55081.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1213]
gi|377757024|gb|EHT80920.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|377764403|gb|EHT88256.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC348]
gi|383363901|gb|EID41227.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-M]
gi|387718027|gb|EIK06022.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS2]
gi|387718094|gb|EIK06088.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS3a]
gi|387719524|gb|EIK07469.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS1]
gi|387724948|gb|EIK12579.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS4]
gi|387727207|gb|EIK14739.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS5]
gi|387730269|gb|EIK17676.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS6]
gi|387735133|gb|EIK22270.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS8]
gi|387736495|gb|EIK23586.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS9]
gi|387736813|gb|EIK23901.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS7]
gi|387744907|gb|EIK31671.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS10]
gi|387745073|gb|EIK31835.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387746666|gb|EIK33395.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS11b]
gi|402348333|gb|EJU83325.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CM05]
gi|408423710|emb|CCJ11121.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408425700|emb|CCJ13087.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408427687|emb|CCJ15050.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408429676|emb|CCJ26841.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408431663|emb|CCJ18978.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408433657|emb|CCJ20942.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408435649|emb|CCJ22909.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408437633|emb|CCJ24876.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|443405358|gb|ELS63962.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21236]
Length = 366
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 196/384 (51%), Gaps = 55/384 (14%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLMVVDAADFDGS 212
V+C RC L++Y +V+DV +E+ DF KL+S + + +V+ VVD DF+GS
Sbjct: 35 VICRRCFRLKNYNEVQDVGLES--EDF-------LKLLSGLADKKGIVVNVVDVFDFEGS 85
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
F V ++V + +++L K+DLLP ++ R + W+++ AR+
Sbjct: 86 FINAVKRIVGNK-----------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + +SA K WG+ L+ + ++ + +V+ +G N GKSTL+N K ++A
Sbjct: 129 YGLEA-DDVVLISAEKGWGIDDLLSSIANIR-ENEDVYIVGTTNVGKSTLIN---KLIEA 183
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
G EK++V T + PGTTL ++ + L + ++DTPG++ +Q+T ++ +E
Sbjct: 184 SVG----EKDVV---TTSRFPGTTLDMIDIP--LDESSFMYDTPGIIQDHQMTHLVSEKE 234
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K++ KE+K R Y++ ++ GL R+D + + S L +H KTE
Sbjct: 235 LKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEK 292
Query: 453 ACTMVEKHFGRQLQPPIGEKRVE--ELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVR 510
A + G L PP + + EL K VR E +G D+ +GLG+ ++
Sbjct: 293 ANDLWRNQLGDLLTPPGNPQNFDLNEL-KAVRLE---TG----KEKRDVMISGLGFITI- 343
Query: 511 LKGEAALGVWTYEGVDIVLRNALL 534
A + V + VD+VLRN++L
Sbjct: 344 -GPGAKVIVRVPKNVDVVLRNSIL 366
>gi|253732250|ref|ZP_04866415.1| GTP-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253733152|ref|ZP_04867317.1| GTP-binding protein [Staphylococcus aureus subsp. aureus TCH130]
gi|417897885|ref|ZP_12541811.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21259]
gi|253724039|gb|EES92768.1| GTP-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253728908|gb|EES97637.1| GTP-binding protein [Staphylococcus aureus subsp. aureus TCH130]
gi|341849387|gb|EGS90530.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21259]
Length = 366
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 196/384 (51%), Gaps = 55/384 (14%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLMVVDAADFDGS 212
V+C RC L++Y +V+DV +E+ DF KL+S + + +V+ VVD DF+GS
Sbjct: 35 VICRRCFRLKNYNEVQDVGLES--EDF-------LKLLSGLADKKGIVVNVVDVFDFEGS 85
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
F V ++V + +++L K+DLLP ++ R + W+++ AR+
Sbjct: 86 FINAVKRIVGNK-----------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + +SA K WG+ L+ + ++ + +V+ +G N GKSTL+N K ++A
Sbjct: 129 YGLEA-DDVVLISAEKGWGIDDLLSSIANIR-ENEDVYIVGTTNVGKSTLIN---KLIEA 183
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
G EK++V T + PGTTL ++ + L + ++DTPG++ +Q+T ++ +E
Sbjct: 184 SVG----EKDVV---TTSRFPGTTLDMIDIP--LDESSFMYDTPGIIQDHQMTHLVSEKE 234
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K++ KE+K R Y++ ++ GL R+D + + S L +H KTE
Sbjct: 235 LKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEK 292
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELG--KWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVR 510
A + G L PP G + +L K VR E +G D+ +GLG+ ++
Sbjct: 293 ANDLWRNQLGDLLTPP-GNPQNFDLNEVKAVRLE---TG----KEKRDVMISGLGFITI- 343
Query: 511 LKGEAALGVWTYEGVDIVLRNALL 534
A + V + VD+VLRN++L
Sbjct: 344 -GPGAKVIVRVPKNVDVVLRNSIL 366
>gi|418576003|ref|ZP_13140150.1| GTP-binding protein YqeH [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|418576029|ref|ZP_13140175.1| GTP-binding protein YqeH [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379325091|gb|EHY92223.1| GTP-binding protein YqeH [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379325751|gb|EHY92882.1| GTP-binding protein YqeH [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 368
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 197/387 (50%), Gaps = 53/387 (13%)
Query: 150 HEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADF 209
+++ V+C RC L++Y +V+DV +++ DF + L + + +V+ VVD DF
Sbjct: 33 YKEDVICKRCFRLKNYNEVQDVGLDS----EDFLNL----LNGLADKKGIVVNVVDVFDF 84
Query: 210 DGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
+GSF + ++V GN +++LV K+DLLP ++ R + W+++
Sbjct: 85 EGSFINAIKRIV----------------GN-KQIILVGNKLDLLPKQINKRRVKEWLKKT 127
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNA-IAK 328
AR+ G+ + +SA KN G++ L++ + L +V+ +G N GKSTL+N I +
Sbjct: 128 ARKYGLDA-EDVILISAEKNEGIEDLLNAINTLRNN-DDVYIVGTTNVGKSTLINKLIER 185
Query: 329 SVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRL 388
SV EKN+V T + PGTTL ++ + L + ++DTPG++ +Q+T +
Sbjct: 186 SVG--------EKNVV---TTSRFPGTTLDMIDIP--LDDTSFMYDTPGVIQEHQMTHYV 232
Query: 389 TREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMG 448
T +E K + KE+K R Y++ G ++ GL R+D + + S L +H
Sbjct: 233 TEKELKTIMPKKEVKQRVYQLNEGQTLFFGGLARIDYISGGKRPL--VCYFSNDLNIHRT 290
Query: 449 KTENACTMVEKHFGRQLQPPIGEKRVE-ELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWF 507
KTENA + G L PP + + K VR E +G D+ +GLG+
Sbjct: 291 KTENANELWRNQLGDVLSPPNNPDHFDLQNVKAVRLE---TG----KEKRDVMISGLGFI 343
Query: 508 SVRLKGEAALGVWTYEGVDIVLRNALL 534
++ A + V + VD+VLRN+++
Sbjct: 344 TI--DEGAKIIVRVPKNVDVVLRNSIM 368
>gi|304380806|ref|ZP_07363473.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|304340682|gb|EFM06615.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
Length = 366
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 197/384 (51%), Gaps = 55/384 (14%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLMVVDAADFDGS 212
V+C RC L++Y +V+DV +E+ DF KL+S + + +V+ VVD DF+GS
Sbjct: 35 VICRRCFRLKNYNEVQDVGLES--EDF-------LKLLSGLADKKGIVVNVVDVFDFEGS 85
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
F V ++V GN +++L K+DLLP ++ R + W+++ AR+
Sbjct: 86 FINAVKRIV----------------GN-KKIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + +SA K WG+ L+ + ++ + +V+ +G N GKSTL+N K ++A
Sbjct: 129 YGLEA-DDVVLISAEKGWGIDDLLSSIANIR-ENEDVYIVGTTNVGKSTLIN---KLIEA 183
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
G EK++V T + PGTTL ++ + L + ++DTPG++ +Q+T ++ +E
Sbjct: 184 SVG----EKDVV---TTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHLVSEKE 234
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K++ KE+K R Y++ ++ GL R+D + + S L +H KTE
Sbjct: 235 LKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSDGKRPL--VCFFSNDLNIHRTKTEK 292
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELG--KWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVR 510
A + G L PP G + +L K VR E +G D+ +GLG+ ++
Sbjct: 293 ANDLWRNQLGDLLTPP-GNPQNFDLNEVKAVRLE---TG----KEKRDVMISGLGFITI- 343
Query: 511 LKGEAALGVWTYEGVDIVLRNALL 534
A + V + VD+VLRN++L
Sbjct: 344 -GPGAKVIVRVPKNVDVVLRNSIL 366
>gi|386729298|ref|YP_006195681.1| GTP-binding protein [Staphylococcus aureus subsp. aureus 71193]
gi|387602937|ref|YP_005734458.1| GTPase family protein [Staphylococcus aureus subsp. aureus ST398]
gi|404478947|ref|YP_006710377.1| GTPase [Staphylococcus aureus 08BA02176]
gi|418310191|ref|ZP_12921741.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21331]
gi|418978321|ref|ZP_13526122.1| GTP-binding protein [Staphylococcus aureus subsp. aureus DR10]
gi|283470875|emb|CAQ50086.1| GTPase family protein [Staphylococcus aureus subsp. aureus ST398]
gi|365237648|gb|EHM78494.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21331]
gi|379993937|gb|EIA15382.1| GTP-binding protein [Staphylococcus aureus subsp. aureus DR10]
gi|384230591|gb|AFH69838.1| GTP-binding protein [Staphylococcus aureus subsp. aureus 71193]
gi|404440436|gb|AFR73629.1| putative GTPase [Staphylococcus aureus 08BA02176]
Length = 366
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 197/384 (51%), Gaps = 55/384 (14%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLMVVDAADFDGS 212
V+C RC L++Y +V+DV +E+ DF KL+S + + +V+ VVD DF+GS
Sbjct: 35 VICRRCFRLKNYNEVQDVGLES--EDF-------LKLLSGLADKKGIVVNVVDVFDFEGS 85
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
F V ++V GN +++L K+DLLP ++ R + W+++ AR+
Sbjct: 86 FINAVKRIV----------------GN-KKIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + +SA K WG+ L+ + ++ + +V+ +G N GKSTL+N K ++A
Sbjct: 129 YGLEA-DDVVLISAEKGWGIDDLLSSIANIR-ENEDVYIVGTTNVGKSTLIN---KLIEA 183
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
G EK++V T + PGTTL ++ + L + ++DTPG++ +Q+T ++ +E
Sbjct: 184 SVG----EKDVV---TTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHLVSEKE 234
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K++ KE+K R Y++ ++ GL R+D + + S L +H KTE
Sbjct: 235 LKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEK 292
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELG--KWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVR 510
A + G L PP G + +L K VR E +G D+ +GLG+ ++
Sbjct: 293 ANDLWRNQLGDLLTPP-GNPQNFDLNEVKAVRLE---TG----KEKRDVMISGLGFITI- 343
Query: 511 LKGEAALGVWTYEGVDIVLRNALL 534
A + V + VD+VLRN++L
Sbjct: 344 -GPGAKVIVRVPKNVDVVLRNSIL 366
>gi|258424024|ref|ZP_05686906.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9635]
gi|417889889|ref|ZP_12533968.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21200]
gi|418284085|ref|ZP_12896817.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21202]
gi|418308957|ref|ZP_12920538.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21194]
gi|418558984|ref|ZP_13123531.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21252]
gi|418889412|ref|ZP_13443545.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1524]
gi|257845645|gb|EEV69677.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9635]
gi|341855582|gb|EGS96426.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21200]
gi|365164949|gb|EHM56779.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21202]
gi|365236106|gb|EHM77008.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21194]
gi|371976334|gb|EHO93624.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21252]
gi|377752920|gb|EHT76838.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1524]
Length = 366
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 196/384 (51%), Gaps = 55/384 (14%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLMVVDAADFDGS 212
V+C RC L++Y +V+DV +E+ DF KL+S + + +V+ VVD DF+GS
Sbjct: 35 VICRRCFRLKNYNEVQDVGLES--EDF-------LKLLSGLADKKGIVVNVVDVFDFEGS 85
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
F V ++V + +++L K+DLLP ++ R + W+++ AR+
Sbjct: 86 FINAVKRIVGNK-----------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + +SA K WG+ L+ + ++ + +V+ +G N GKSTL+N K ++A
Sbjct: 129 YGLEA-DDVVLISAEKGWGIDDLLSSIANIR-ENEDVYIVGTTNVGKSTLIN---KLIEA 183
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
G EK++V T + PGTTL ++ + L + ++DTPG++ +Q+T ++ +E
Sbjct: 184 SVG----EKDVV---TTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQEHQMTHLVSEKE 234
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K++ KE+K R Y++ ++ GL R+D + + S L +H KTE
Sbjct: 235 LKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEK 292
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELG--KWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVR 510
A + G L PP G + +L K VR E +G D+ +GLG+ ++
Sbjct: 293 ANDLWRNQLGDLLTPP-GNPQNFDLNEVKAVRLE---TG----KEKRDVMISGLGFITI- 343
Query: 511 LKGEAALGVWTYEGVDIVLRNALL 534
A + V + VD+VLRN++L
Sbjct: 344 -GPGAKVIVRVPKNVDVVLRNSIL 366
>gi|257425721|ref|ZP_05602145.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257428382|ref|ZP_05604780.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257431019|ref|ZP_05607399.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
68-397]
gi|257433707|ref|ZP_05610065.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
E1410]
gi|257436621|ref|ZP_05612665.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus M876]
gi|282911234|ref|ZP_06319036.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282914403|ref|ZP_06322189.1| GTP-binding protein [Staphylococcus aureus subsp. aureus M899]
gi|282924697|ref|ZP_06332365.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C101]
gi|293503477|ref|ZP_06667324.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510494|ref|ZP_06669200.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus M809]
gi|293531034|ref|ZP_06671716.1| GTP-binding protein [Staphylococcus aureus subsp. aureus M1015]
gi|384867430|ref|YP_005747626.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus TCH60]
gi|257271415|gb|EEV03561.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257275223|gb|EEV06710.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257278449|gb|EEV09085.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
68-397]
gi|257281800|gb|EEV11937.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
E1410]
gi|257283972|gb|EEV14095.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus M876]
gi|282313532|gb|EFB43927.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C101]
gi|282321584|gb|EFB51909.1| GTP-binding protein [Staphylococcus aureus subsp. aureus M899]
gi|282324929|gb|EFB55239.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus WBG10049]
gi|290920302|gb|EFD97368.1| GTP-binding protein [Staphylococcus aureus subsp. aureus M1015]
gi|291095143|gb|EFE25408.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 58-424]
gi|291466858|gb|EFF09378.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus M809]
gi|312437935|gb|ADQ77006.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus TCH60]
Length = 366
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 203/402 (50%), Gaps = 58/402 (14%)
Query: 139 EAENETSEVKKHE---KPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-S 194
E +N+ V +H V+C RC L++Y +V+DV +E+ DF KL+S +
Sbjct: 17 EDKNKPGFVPEHNMFGDDVICRRCFRLKNYNEVQDVGLES--EDF-------LKLLSGLA 67
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
+ +V+ VVD DF+GSF V ++V + +++L K+DLLP
Sbjct: 68 DKKGIVVNVVDVFDFEGSFINAVKRIVGNK-----------------KIILAANKLDLLP 110
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
++ R + W+++ AR+ G+ + +SA K WG+ L+ + ++ + +V+ +G
Sbjct: 111 KQINKRRVKEWLKRTARKYGLEA-DDVVLISAEKGWGIDDLLSSIANIR-ENEDVYIVGT 168
Query: 315 QNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFD 374
N GKSTL+N K ++A G EK++V T + PGTTL ++ + L + ++D
Sbjct: 169 TNVGKSTLIN---KLIEASVG----EKDVV---TTSRFPGTTLDMIDIP--LDETSFMYD 216
Query: 375 TPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIY 434
TPG++ +Q+T ++ +E K++ KE+K R Y++ ++ GL R+D +
Sbjct: 217 TPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL- 275
Query: 435 VTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELG--KWVRKEFHVSGSSW 492
+ S L +H KTE A + G L PP G + +L K VR E +G
Sbjct: 276 -ICFFSNDLNIHRTKTEKANDLWRNQLGDLLTPP-GNPQNFDLNEVKAVRLE---TG--- 327
Query: 493 DSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
D+ +GLG+ ++ A + V + VD+VLRN++L
Sbjct: 328 -KEKRDVMISGLGFITI--GPGAKVIVRVPKNVDVVLRNSIL 366
>gi|21283277|ref|NP_646365.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus MW2]
gi|49486431|ref|YP_043652.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57651989|ref|YP_186493.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus COL]
gi|87160501|ref|YP_494251.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88195406|ref|YP_500210.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|151221711|ref|YP_001332533.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus str.
Newman]
gi|161509825|ref|YP_001575484.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221141132|ref|ZP_03565625.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|258450575|ref|ZP_05698637.1| GTP-binding protein YqeH [Staphylococcus aureus A5948]
gi|262048596|ref|ZP_06021479.1| hypothetical protein SAD30_0992 [Staphylococcus aureus D30]
gi|262051255|ref|ZP_06023479.1| hypothetical protein SA930_1686 [Staphylococcus aureus 930918-3]
gi|282916867|ref|ZP_06324625.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus D139]
gi|282920145|ref|ZP_06327870.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9765]
gi|283770672|ref|ZP_06343564.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus H19]
gi|284024655|ref|ZP_06379053.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus 132]
gi|294848627|ref|ZP_06789373.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9754]
gi|297207684|ref|ZP_06924119.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300911765|ref|ZP_07129208.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus TCH70]
gi|379014805|ref|YP_005291041.1| GTPase YqeH [Staphylococcus aureus subsp. aureus VC40]
gi|379021378|ref|YP_005298040.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus M013]
gi|384547829|ref|YP_005737082.1| GTP-binding protein [Staphylococcus aureus subsp. aureus ED133]
gi|384862197|ref|YP_005744917.1| GTPase family protein [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|384870137|ref|YP_005752851.1| GTP-binding protein [Staphylococcus aureus subsp. aureus T0131]
gi|385781882|ref|YP_005758053.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 11819-97]
gi|386831206|ref|YP_006237860.1| putative GTPase [Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|387780688|ref|YP_005755486.1| putative GTPase [Staphylococcus aureus subsp. aureus LGA251]
gi|415686213|ref|ZP_11450350.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS01]
gi|416842867|ref|ZP_11905194.1| GTP-binding protein YqeH [Staphylococcus aureus O11]
gi|416846547|ref|ZP_11906596.1| GTP-binding protein YqeH [Staphylococcus aureus O46]
gi|417649327|ref|ZP_12299131.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21189]
gi|417653518|ref|ZP_12303249.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21193]
gi|417799994|ref|ZP_12447126.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21310]
gi|417901075|ref|ZP_12544952.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21266]
gi|418285656|ref|ZP_12898324.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21209]
gi|418313226|ref|ZP_12924720.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21334]
gi|418316433|ref|ZP_12927871.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21340]
gi|418562587|ref|ZP_13127044.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21262]
gi|418571885|ref|ZP_13136105.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21283]
gi|418574394|ref|ZP_13138563.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21333]
gi|418579521|ref|ZP_13143616.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1114]
gi|418599941|ref|ZP_13163415.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21343]
gi|418641781|ref|ZP_13203986.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-24]
gi|418648338|ref|ZP_13210382.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-88]
gi|418650659|ref|ZP_13212677.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-91]
gi|418655646|ref|ZP_13217495.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-105]
gi|418659237|ref|ZP_13220925.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-111]
gi|418873209|ref|ZP_13427519.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-125]
gi|418903903|ref|ZP_13457944.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1770]
gi|418912207|ref|ZP_13466188.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG547]
gi|418925856|ref|ZP_13479758.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG2018]
gi|418928946|ref|ZP_13482832.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1612]
gi|418934567|ref|ZP_13488389.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC128]
gi|418948289|ref|ZP_13500606.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-157]
gi|418950693|ref|ZP_13502844.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-160]
gi|418988663|ref|ZP_13536335.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1835]
gi|419773172|ref|ZP_14299183.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CO-23]
gi|422742619|ref|ZP_16796622.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MRSA177]
gi|422746109|ref|ZP_16800042.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MRSA131]
gi|424785432|ref|ZP_18212235.1| GTP-binding protein YqeH [Staphylococcus aureus CN79]
gi|440707399|ref|ZP_20888098.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21282]
gi|440735047|ref|ZP_20914658.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|448741172|ref|ZP_21723142.1| GTP-binding protein YqeH [Staphylococcus aureus KT/314250]
gi|448745071|ref|ZP_21726945.1| GTP-binding protein YqeH [Staphylococcus aureus KT/Y21]
gi|21204717|dbj|BAB95413.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49244874|emb|CAG43335.1| putative GTPase [Staphylococcus aureus subsp. aureus MSSA476]
gi|57286175|gb|AAW38269.1| GTP-binding protein, putative [Staphylococcus aureus subsp. aureus
COL]
gi|87126475|gb|ABD20989.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202964|gb|ABD30774.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|150374511|dbj|BAF67771.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|160368634|gb|ABX29605.1| GTP-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257861733|gb|EEV84532.1| GTP-binding protein YqeH [Staphylococcus aureus A5948]
gi|259160892|gb|EEW45912.1| hypothetical protein SA930_1686 [Staphylococcus aureus 930918-3]
gi|259163243|gb|EEW47802.1| hypothetical protein SAD30_0992 [Staphylococcus aureus D30]
gi|282319354|gb|EFB49706.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus D139]
gi|282594493|gb|EFB99478.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9765]
gi|283460819|gb|EFC07909.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus H19]
gi|294824653|gb|EFG41076.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9754]
gi|296887701|gb|EFH26599.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|298694878|gb|ADI98100.1| GTP-binding protein [Staphylococcus aureus subsp. aureus ED133]
gi|300886011|gb|EFK81213.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus TCH70]
gi|302751426|gb|ADL65603.1| GTPase family protein [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|315198706|gb|EFU29034.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS01]
gi|320140517|gb|EFW32371.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144055|gb|EFW35824.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MRSA177]
gi|323438562|gb|EGA96309.1| GTP-binding protein YqeH [Staphylococcus aureus O11]
gi|323442801|gb|EGB00426.1| GTP-binding protein YqeH [Staphylococcus aureus O46]
gi|329314272|gb|AEB88685.1| GTP-binding protein [Staphylococcus aureus subsp. aureus T0131]
gi|329728433|gb|EGG64870.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21189]
gi|329733209|gb|EGG69546.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21193]
gi|334272526|gb|EGL90891.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21310]
gi|341846234|gb|EGS87431.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21266]
gi|344177790|emb|CCC88269.1| putative GTPase [Staphylococcus aureus subsp. aureus LGA251]
gi|359830687|gb|AEV78665.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus M013]
gi|364522871|gb|AEW65621.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 11819-97]
gi|365169466|gb|EHM60714.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21209]
gi|365236497|gb|EHM77386.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21334]
gi|365241117|gb|EHM81872.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21340]
gi|371973691|gb|EHO91039.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21262]
gi|371978377|gb|EHO95626.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21283]
gi|371979121|gb|EHO96356.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21333]
gi|374363502|gb|AEZ37607.1| GTPase YqeH [Staphylococcus aureus subsp. aureus VC40]
gi|374395530|gb|EHQ66793.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21343]
gi|375018236|gb|EHS11816.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-24]
gi|375026251|gb|EHS19634.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-88]
gi|375027945|gb|EHS21303.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-91]
gi|375036139|gb|EHS29220.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-105]
gi|375036235|gb|EHS29313.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-111]
gi|375366400|gb|EHS70397.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-125]
gi|375373050|gb|EHS76756.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-157]
gi|375376169|gb|EHS79717.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-160]
gi|377697548|gb|EHT21903.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1114]
gi|377717756|gb|EHT41931.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1835]
gi|377722464|gb|EHT46590.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG547]
gi|377738858|gb|EHT62867.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1612]
gi|377742918|gb|EHT66903.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1770]
gi|377744925|gb|EHT68902.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG2018]
gi|377770661|gb|EHT94422.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC128]
gi|383972996|gb|EID89017.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CO-23]
gi|385196598|emb|CCG16227.1| putative GTPase [Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|421956842|gb|EKU09171.1| GTP-binding protein YqeH [Staphylococcus aureus CN79]
gi|436431142|gb|ELP28496.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|436506155|gb|ELP41994.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21282]
gi|445548086|gb|ELY16342.1| GTP-binding protein YqeH [Staphylococcus aureus KT/314250]
gi|445561610|gb|ELY17803.1| GTP-binding protein YqeH [Staphylococcus aureus KT/Y21]
Length = 366
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 196/384 (51%), Gaps = 55/384 (14%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLMVVDAADFDGS 212
V+C RC L++Y +V+DV +E+ DF KL+S + + +V+ VVD DF+GS
Sbjct: 35 VICRRCFRLKNYNEVQDVGLES--EDF-------LKLLSGLADKKGIVVNVVDVFDFEGS 85
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
F V ++V + +++L K+DLLP ++ R + W+++ AR+
Sbjct: 86 FINAVKRIVGNK-----------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + +SA K WG+ L+ + ++ + +V+ +G N GKSTL+N K ++A
Sbjct: 129 YGLEA-DDVVLISAEKGWGIDDLLSSIANIR-ENEDVYIVGTTNVGKSTLIN---KLIEA 183
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
G EK++V T + PGTTL ++ + L + ++DTPG++ +Q+T ++ +E
Sbjct: 184 SVG----EKDVV---TTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHLVSEKE 234
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K++ KE+K R Y++ ++ GL R+D + + S L +H KTE
Sbjct: 235 LKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEK 292
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELG--KWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVR 510
A + G L PP G + +L K VR E +G D+ +GLG+ ++
Sbjct: 293 ANDLWRNQLGDLLTPP-GNPQNFDLNEVKAVRLE---TG----KEKRDVMISGLGFITI- 343
Query: 511 LKGEAALGVWTYEGVDIVLRNALL 534
A + V + VD+VLRN++L
Sbjct: 344 -GPGAKVIVRVPKNVDVVLRNSIL 366
>gi|73662470|ref|YP_301251.1| GTP-binding protein YqeH [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494985|dbj|BAE18306.1| putative GTPase [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
Length = 368
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 197/387 (50%), Gaps = 53/387 (13%)
Query: 150 HEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADF 209
+++ V+C RC L++Y +V+DV +++ DF + L + + +V+ VVD DF
Sbjct: 33 YKEDVICKRCFRLKNYNEVQDVGLDS----EDFLNL----LNGLADKKGIVVNVVDVFDF 84
Query: 210 DGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
+GSF + ++V GN +++LV K+DLLP ++ R + W+++
Sbjct: 85 EGSFINAIKRIV----------------GN-KQIILVGNKLDLLPKQINKRRVKEWLKKT 127
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNA-IAK 328
AR+ G+ + +SA KN G++ L++ + L +V+ +G N GKSTL+N I +
Sbjct: 128 ARKYGLDA-EDVILISAEKNEGIEDLLNAINTLRNN-DDVYIVGTTNVGKSTLINKLIER 185
Query: 329 SVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRL 388
SV EKN+V T + PGTTL ++ + L + ++DTPG++ +Q+T +
Sbjct: 186 SVG--------EKNVV---TTSRFPGTTLDMIDIP--LDDTSFMYDTPGVIQEHQMTHYV 232
Query: 389 TREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMG 448
T +E K + KE+K R Y++ G ++ GL R+D + + S L +H
Sbjct: 233 TEKELKTIMPKKEVKQRVYQLNEGQTLFFGGLARIDYISGGKRPL--VCYFSNDLNIHRT 290
Query: 449 KTENACTMVEKHFGRQLQPPIGEKRVE-ELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWF 507
KTENA + G L PP + + K VR E +G D+ +GLG+
Sbjct: 291 KTENANELWRNQLGDVLSPPNNPDHFDLQNVKAVRLE---TG----KEKRDVMISGLGFI 343
Query: 508 SVRLKGEAALGVWTYEGVDIVLRNALL 534
++ A + V + VD+VLRN+++
Sbjct: 344 TI--DEGAKIIVRVPKNVDVVLRNSIM 368
>gi|218288657|ref|ZP_03492934.1| Nitric-oxide synthase [Alicyclobacillus acidocaldarius LAA1]
gi|218241314|gb|EED08489.1| Nitric-oxide synthase [Alicyclobacillus acidocaldarius LAA1]
Length = 396
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 184/434 (42%), Gaps = 93/434 (21%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
VC GCG +Q T+ + PGY V +SHL E E+
Sbjct: 6 VCVGCGAPLQSTDERVPGY----------VPESHL---------------------ERED 34
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
V+C RC +RHYG + V+ + T R++ + +VL
Sbjct: 35 -----------VLCRRCFRIRHYGDFTPIAVD--------EDTYERQVAAIFDRPGLVLY 75
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD D GS + V+ + V++VV K+DLLP+ +
Sbjct: 76 VVDVFDLAGSLIPSARRFVASSD-----------------VIVVVNKVDLLPADVGYEAL 118
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
W+R R G+ + + F+SA K G+ L+D V + V+ IG N GKSTL
Sbjct: 119 ADWIRGEVRATGVEPL-DVAFISAEKRRGVDRLVDRVARETER--PVYVIGMANVGKSTL 175
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP-AQAKLFDTPGLLHP 381
LNA+ + + E K T + PGTTL + R+E P + +LFDTPGL++
Sbjct: 176 LNAMVERLS-------ERKQ---PFTVSRRPGTTLAMSRLEIEGPYGRVELFDTPGLMYT 225
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+++ RL + K V ++PR Y++ G ++ + GL+R+ E E + ++ S
Sbjct: 226 SRVIERLCGDCLKWVVPRTRVRPRVYQLNPGQALFLGGLVRL--ETLGGERQGIVLYVSN 283
Query: 442 YLPLHMGKTENACTMVEKHFGRQLQPP-------IGEKRVEELGKWVRKEFHVSGSSWDS 494
LP+H K E A H L+ P ++R + R++ + S
Sbjct: 284 ELPVHRTKRERADQFFADHRYDILKVPCEACADAFADRRSWLVAAPPRRD---ADFSLGK 340
Query: 495 SSVDIAAAGLGWFS 508
DI GLGW +
Sbjct: 341 RGGDIVLPGLGWIA 354
>gi|319937329|ref|ZP_08011736.1| hypothetical protein HMPREF9488_02571 [Coprobacillus sp. 29_1]
gi|319807695|gb|EFW04288.1| hypothetical protein HMPREF9488_02571 [Coprobacillus sp. 29_1]
Length = 366
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 207/456 (45%), Gaps = 101/456 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q+ N KH GY + + N +KV
Sbjct: 7 CFGCGAIIQNENEKHIGYVPKSAMNNDKV------------------------------- 35
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARS-VVLM 202
+C RC L++Y K+++ N+ D DF ++ G + +V+
Sbjct: 36 -----------LCQRCFQLKNYHKLQET---NMTKD-DF-----LTILQQIGEKDCLVVY 75
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
++D DF+GS + + + + A+ + V+++ K D+LP S+ +
Sbjct: 76 MIDLFDFNGSMIQGLMRHI---------AYND--------VLVLANKRDILPKSVKERKL 118
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSL-IDDVVD--LAGKRG-NVWAIGAQNAG 318
EHWVR++ ++ G+ V + G KS+ DD+ D + ++G +V+ +G N G
Sbjct: 119 EHWVRRQLKDQGVQA------VDVIVTSGKKSMNFDDIYDAIMEHRKGRDVYVVGVTNVG 172
Query: 319 KSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGL 378
KST +N + K + E++N++ T + PGTTL ++ + L + L+DTPG+
Sbjct: 173 KSTFINGLLKHY-----AEVEKQNLI---TVSEYPGTTLNLIEIP--LDEHSVLYDTPGI 222
Query: 379 LHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVW 438
++ +Q+T L E+ K V EL+P +++ + +++ GL R+D E S +
Sbjct: 223 INESQMTHLLAPEDIKKVVPQGELRPMGFQLNSLQTLYFGGLGRIDYLEGEQSSF--IAY 280
Query: 439 ASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVD 498
S L +H KT A + +H + LQ I ++ + + EF + D
Sbjct: 281 FSKNLKIHRTKTIKADDLYNRH--QTLQYEIA--GIDSIAQMKSYEFRLM-----PGKTD 331
Query: 499 IAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
I +GLG+ +V KG + V + ++LR A++
Sbjct: 332 IVISGLGFITVSSKG-GKVRVLVPPQISVILREAII 366
>gi|282919372|ref|ZP_06327107.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C427]
gi|417887990|ref|ZP_12532109.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21195]
gi|282317182|gb|EFB47556.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C427]
gi|341857019|gb|EGS97846.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21195]
Length = 366
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 190/382 (49%), Gaps = 51/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLMVVDAADFDGS 212
V+C RC L++Y +V+DV +E+ DF KL+S + + +V+ VVD DF+GS
Sbjct: 35 VICRRCFRLKNYNEVQDVGLES--EDF-------LKLLSGLADKKGIVVNVVDVFDFEGS 85
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
F V ++V GN +++L K+DLLP ++ R + W+++ AR+
Sbjct: 86 FINAVKRIV----------------GN-KKIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + +SA K WG+ L+ + ++ + +V+ +G N GKSTL+N K ++A
Sbjct: 129 YGLEA-DDVVLISAEKGWGIDDLLSSIANIR-ENEDVYIVGTTNVGKSTLIN---KLIEA 183
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
G EK++V T + PGTTL ++ + L + ++DTPG++ +Q+T ++ +E
Sbjct: 184 SVG----EKDVV---TTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHLVSEKE 234
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K++ KE+K R Y++ ++ GL R+D + + S L +H KTE
Sbjct: 235 LKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--ICFFSNDLNIHRTKTEK 292
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A + G L PP L + E D+ +GLG+ ++
Sbjct: 293 ANDLWRNQLGDLLTPP------GNLQNFDLNEVKAVRLETGKEKRDVMISGLGFITI--G 344
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
A + V + VD+VLRN++L
Sbjct: 345 PGAKVIVRVPKNVDVVLRNSIL 366
>gi|418906541|ref|ZP_13460567.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|377763446|gb|EHT87302.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC345D]
Length = 366
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 203/402 (50%), Gaps = 58/402 (14%)
Query: 139 EAENETSEVKKHE---KPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-S 194
E +N+ V +H V+C RC L++Y +V+DV +E+ DF KL+S +
Sbjct: 17 EDKNKPGFVPEHNMFRDDVICRRCFRLKNYNEVQDVGLES--EDF-------LKLLSGLA 67
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
+ +V+ VVD DF+GSF V ++V + +++L K+DLLP
Sbjct: 68 DKKGIVVNVVDVFDFEGSFINAVKRIVGNK-----------------KIILAANKLDLLP 110
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
++ R + W+++ AR+ G+ + +SA K WG+ L+ + ++ + +V+ +G
Sbjct: 111 KQINKRRVKEWLKRTARKYGLEA-DDVVLISAEKGWGIDDLLSSIANIR-ENEDVYIVGT 168
Query: 315 QNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFD 374
N GKSTL+N K ++A G EK++V T + PGTTL ++ + L + ++D
Sbjct: 169 TNVGKSTLIN---KLIEASVG----EKDVV---TTSRFPGTTLDMIDIP--LDETSFMYD 216
Query: 375 TPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIY 434
TPG++ +Q+T ++ +E K++ KE+K R Y++ ++ GL R+D +
Sbjct: 217 TPGIIQDHQMTHLVSGKELKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL- 275
Query: 435 VTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELG--KWVRKEFHVSGSSW 492
+ S L +H KTE A + G L PP G + +L K VR E +G
Sbjct: 276 -VCFFSNDLNIHRTKTEKANDLWRNQLGDLLTPP-GNPQNFDLNEVKAVRLE---TG--- 327
Query: 493 DSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
D+ +GLG+ ++ A + V + VD+VLRN++L
Sbjct: 328 -KEKRDVMISGLGFITI--GPGAKVIVRVPKNVDVVLRNSIL 366
>gi|379795955|ref|YP_005325953.1| putative GTPase [Staphylococcus aureus subsp. aureus MSHR1132]
gi|356872945|emb|CCE59284.1| putative GTPase [Staphylococcus aureus subsp. aureus MSHR1132]
Length = 366
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 202/452 (44%), Gaps = 93/452 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q + PG+ P NL
Sbjct: 7 CIGCGAPLQSEDKNKPGFV--PEHNL---------------------------------- 30
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLM 202
V+C RC L++Y +V+DV +E+ DF KL+S + + +V+
Sbjct: 31 ------FRDDVICRRCFRLKNYNEVQDVGLES--EDF-------LKLLSGLADKKGIVVN 75
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+GSF V ++V GN +++L K+DLLP ++ R
Sbjct: 76 VVDVFDFEGSFINAVKRIV----------------GN-KKIILAANKLDLLPKQINKRRV 118
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ W+++ AR+ G+ + +SA K WG+ L+ + + + +V+ +G N GKSTL
Sbjct: 119 KEWLKRTARKYGLEA-DDVVLISAEKGWGIDDLLSSIAKVR-ENEDVYIVGTTNVGKSTL 176
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N K ++A G EK++V T + PGTTL ++ + L + +FDTPG++ +
Sbjct: 177 IN---KLIEASVG----EKDVV---TTSRFPGTTLDMIDIP--LDETSFMFDTPGIIQDH 224
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
Q+T ++ +E K++ KE+K R Y++ ++ GL R+D + + S
Sbjct: 225 QMTHLVSEKELKIIMPKKEIKQRVYQLNEEQTLFFGGLARIDYVSGGKRPL--ICFFSNE 282
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L +H KTE A + G L PP + + E D+ +
Sbjct: 283 LNIHRTKTEKANELWRNQLGELLTPPSNPQNFD------LNEVKAVRLETGKEKRDVMIS 336
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLG+ ++ A + V + VD++LRN++L
Sbjct: 337 GLGFITI--GPGAKVIVRVPKNVDVILRNSIL 366
>gi|384135845|ref|YP_005518559.1| ribosome biogenesis GTPase YqeH [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339289930|gb|AEJ44040.1| ribosome biogenesis GTPase YqeH [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 389
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 166/376 (44%), Gaps = 83/376 (22%)
Query: 86 GCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENETS 145
GCG +Q T+ + PGY V +SHL E E+
Sbjct: 2 GCGAPLQSTDERMPGY----------VPESHL---------------------ERED--- 27
Query: 146 EVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVD 205
V+C RC +RHYG V V+ + T R++ + +VL VVD
Sbjct: 28 --------VLCRRCFRIRHYGDFTPVAVD--------EETYQRQVAAIFDHPGLVLYVVD 71
Query: 206 AADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHW 265
D GS + V+ + V++VV K+DLLP+ + W
Sbjct: 72 VFDLAGSLIPSARRFVASSD-----------------VIVVVNKVDLLPADVGYEALADW 114
Query: 266 VRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNA 325
+R R G+ + + F+SA K G+ L+D V + V+ +G N GKSTLLNA
Sbjct: 115 IRGEVRATGVEPL-DVAFISAEKRRGVDRLVDRVARETKR--PVYVMGMANVGKSTLLNA 171
Query: 326 IAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP-AQAKLFDTPGLLHPNQI 384
+ + + E K T + PGTTL + R+E P + +LFDTPGL++ +++
Sbjct: 172 MVERLS-------ERKQ---PFTVSRRPGTTLAMSRLEIEGPYGRVELFDTPGLMYTSRV 221
Query: 385 TTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLP 444
RL + K V ++PR Y++ G ++ + GL+R++ E + I ++ S LP
Sbjct: 222 IERLCGDCLKWVVPRSRVRPRVYQLNPGQALFLGGLVRLETLEGERQGI--VLYVSNELP 279
Query: 445 LHMGKTENACTMVEKH 460
+H K E A + +H
Sbjct: 280 VHRTKRERADSFFAEH 295
>gi|417797344|ref|ZP_12444540.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21305]
gi|334266836|gb|EGL85306.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21305]
Length = 366
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 198/400 (49%), Gaps = 54/400 (13%)
Query: 139 EAENETSEVKKHE---KPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-S 194
E +N+ V +H V+C RC L++Y +V+DV +E+ DF KL+S +
Sbjct: 17 EDKNKPGFVPEHNMFRDDVICRRCFRLKNYNEVQDVGLES--EDF-------LKLLSGLA 67
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
+ +V+ VVD DF+GSF V ++V + +++L K+DLLP
Sbjct: 68 DKKGIVVNVVDVFDFEGSFINAVKRIVGNK-----------------KIILAANKLDLLP 110
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
++ R + W+++ AR+ G+ + +SA K WG+ L+ + ++ + +V+ +G
Sbjct: 111 KQINKRRVKEWLKRTARKYGLEA-DDVVLISAEKGWGIDDLLSSIANIR-ENEDVYIVGT 168
Query: 315 QNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFD 374
N GKSTL+N K ++A G EK++V T + PGTTL ++ + L + ++D
Sbjct: 169 TNVGKSTLIN---KLIEASVG----EKDVV---TTSRFPGTTLDMIDIP--LDETSFMYD 216
Query: 375 TPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIY 434
TPG++ +Q+T ++ +E K++ KE+K R Y++ ++ GL R+D +
Sbjct: 217 TPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL- 275
Query: 435 VTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDS 494
+ S L +H KTE A + G L PP G + +L E
Sbjct: 276 -VCFFSNDLNIHRTKTEKANDLWRNQLGDLLTPP-GNPQNFDLN-----EVKAVRLKTGK 328
Query: 495 SSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
D+ +GLG+ ++ A + V + VD+VLRN++L
Sbjct: 329 EKRDVMISGLGFITI--GPGAKVIVRVPKNVDVVLRNSIL 366
>gi|418645090|ref|ZP_13207218.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-55]
gi|375023923|gb|EHS17368.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-55]
Length = 366
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 201/402 (50%), Gaps = 58/402 (14%)
Query: 139 EAENETSEVKKHE---KPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-S 194
E +N+ V +H V+C RC L++Y +V+DV +E+ DF KL+S +
Sbjct: 17 EDKNKPGFVPEHNMFRDDVICRRCFRLKNYNEVQDVGLES--EDF-------LKLLSGLA 67
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
+ +V+ VVD DF+GSF V ++V + +++L K+DLLP
Sbjct: 68 DKKGIVVNVVDVFDFEGSFINAVKRIVGNK-----------------KIILAANKLDLLP 110
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
++ R + W+++ AR+ G+ + +SA K WG+ L+ + ++ +V+ +G
Sbjct: 111 KQINKRRVKEWLKRTARKYGLEA-DDVVLISAEKGWGIDDLLSSIANIRDNE-DVYIVGT 168
Query: 315 QNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFD 374
N GKSTL+N K ++A G EK++V T + PGTTL ++ + L + ++D
Sbjct: 169 TNVGKSTLIN---KLIEASVG----EKDVV---TTSRFPGTTLDMIDIP--LDESSFMYD 216
Query: 375 TPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIY 434
TPG++ +Q+T ++ +E K++ KE+K R Y++ ++ GL R+D +
Sbjct: 217 TPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL- 275
Query: 435 VTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELG--KWVRKEFHVSGSSW 492
+ S L +H K E A + G L PP G + +L K VR E +G
Sbjct: 276 -VCFFSNDLNIHRTKMEKANDLWRNQLGDLLTPP-GNPQNFDLNEIKAVRLE---TG--- 327
Query: 493 DSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
D+ +GLG+ ++ A + V + VD+VLRN++L
Sbjct: 328 -KEKRDVMISGLGFITI--GPGAKVIVRVPKNVDVVLRNSIL 366
>gi|417897023|ref|ZP_12540966.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21235]
gi|341840289|gb|EGS81809.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21235]
Length = 366
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 196/384 (51%), Gaps = 55/384 (14%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLMVVDAADFDGS 212
V+C RC L++Y +V+DV +E+ DF KL+S + + +V+ VVD DF+GS
Sbjct: 35 VICRRCFRLKNYNEVQDVGLES--EDF-------LKLLSGLADKKGIVVNVVDVFDFEGS 85
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
F V ++V + +++L K+DLLP ++ R + W+++ AR+
Sbjct: 86 FINAVKRIVGNK-----------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + +SA K WG+ L+ + ++ + +V+ +G N GKSTL+N K ++A
Sbjct: 129 YGLEA-DDVVLISAEKGWGIDDLLSSIANIR-ENEDVYIVGTTNVGKSTLIN---KLIEA 183
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
G EK++V T + PGTTL ++ + L + ++DTPG++ +Q+T ++ +E
Sbjct: 184 SVG----EKDVV---TTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHLVSEKE 234
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K++ KE+K R Y++ ++ GL R+D + + S L +H K+E
Sbjct: 235 LKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKSEK 292
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELG--KWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVR 510
A + G L PP G + +L K VR E +G D+ +GLG+ ++
Sbjct: 293 ANDLWRNQLGDLLTPP-GNPQNFDLNEVKAVRLE---TG----KEKRDVMISGLGFITI- 343
Query: 511 LKGEAALGVWTYEGVDIVLRNALL 534
A + V + VD+VLRN++L
Sbjct: 344 -GPGAKVIVRVPKNVDVVLRNSIL 366
>gi|418994322|ref|ZP_13541957.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG290]
gi|377744119|gb|EHT68097.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG290]
Length = 366
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 195/384 (50%), Gaps = 55/384 (14%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLMVVDAADFDGS 212
V+C RC L++Y +V+DV +E+ DF KL+S + + +V+ VVD DF+GS
Sbjct: 35 VICRRCFRLKNYNEVQDVGLES--EDF-------LKLLSGLADKKGIVVNVVDVFDFEGS 85
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
F V ++V + +++L K+DLLP ++ R + W+++ AR+
Sbjct: 86 FINAVKRIVGNK-----------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + +SA K WG+ L+ + ++ + +V+ +G N GKSTL+N K ++A
Sbjct: 129 YGLEA-DDVVLISAEKGWGIDDLLSSIANIR-ENEDVYIVGTTNVGKSTLIN---KLIEA 183
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
G EK++V T + PGTTL ++ + L + ++DTPG++ +Q+T ++ +E
Sbjct: 184 SVG----EKDVV---TTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQEHQMTHLVSEKE 234
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K++ KE+K R Y++ + GL R+D + + S L +H KTE
Sbjct: 235 LKIIMPKKEIKQRVYQLNEAQILFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEK 292
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELG--KWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVR 510
A + G L PP G + +L K VR E +G D+ +GLG+ ++
Sbjct: 293 ANDLWRNQLGDLLTPP-GNPQNFDLNEVKAVRLE---TG----KEKRDVMISGLGFITI- 343
Query: 511 LKGEAALGVWTYEGVDIVLRNALL 534
A + V + VD+VLRN++L
Sbjct: 344 -GPGAKVIVRVPKNVDVVLRNSIL 366
>gi|441471183|emb|CCQ20938.1| Uncharacterized protein yqeH [Listeria monocytogenes]
gi|441474312|emb|CCQ24066.1| Uncharacterized protein yqeH [Listeria monocytogenes N53-1]
Length = 306
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 167/370 (45%), Gaps = 83/370 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY P +LN NE
Sbjct: 7 CIGCGAVIQTEDPDKIGY--APKSSLN-----------NEQ------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L+HY +++DV L D DF R L S +++++ V
Sbjct: 35 ----------VICKRCFRLKHYNEIQDVA----LTDDDF----LRILNQISSKQALIVYV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS+ + + +G+ P V+LV K D+LP SL +
Sbjct: 77 VDIFDFDGSWLPGLPRF----------------AGSNP-VLLVGNKEDVLPKSLKRDKLT 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+R RA+E G++ T + VSA K G +L++ + +L + +V+ +G N GKSTL+
Sbjct: 120 RWMRTRAKEQGLAA-TDVVLVSAEKGHGFDTLLEKIDELRNGQ-DVYVVGCTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N I K E N++ T + PGTTL ++E L L DTPG+++ +Q
Sbjct: 178 NRIIKQASG-------ENNVI---TTSQFPGTTLD--KIEIPLADGNVLVDTPGIINHHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + K + KE+KP +++ ++ + L R+D +S+ V+ S L
Sbjct: 226 MAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNL 283
Query: 444 PLHMGKTENA 453
P+H K E A
Sbjct: 284 PIHRTKLEKA 293
>gi|82751199|ref|YP_416940.1| GTP-binding protein YqeH [Staphylococcus aureus RF122]
gi|82656730|emb|CAI81158.1| conserved hypothetical protein [Staphylococcus aureus RF122]
Length = 366
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 196/384 (51%), Gaps = 55/384 (14%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLMVVDAADFDGS 212
V+C RC L++Y +V+DV +E+ DF KL+S + + +V+ VVD DF+GS
Sbjct: 35 VICRRCFRLKNYNEVQDVGLES--EDF-------LKLLSGLADKKGIVVNVVDVFDFEGS 85
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
F V ++V GN +++L K+DLLP ++ R + W+++ AR+
Sbjct: 86 FINAVKRIV----------------GN-KKIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
G+ + +SA K WG+ L+ + ++ + +V+ +G N GKSTL+N K ++
Sbjct: 129 YGLEA-DDVVLISAEKGWGIDDLLSSIANIR-ENEDVYIVGTTNVGKSTLIN---KLIED 183
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
G EK++V T + PGTTL ++ + L + ++DTPG++ +Q+T ++ +E
Sbjct: 184 SVG----EKDVV---TTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHLVSEKE 234
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K++ KE+K R Y++ ++ GL R+D + + S L +H KTE
Sbjct: 235 LKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEK 292
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELG--KWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVR 510
A + G L PP G + +L K VR E +G D+ +GLG+ ++
Sbjct: 293 ANDLWRNQLGDLLTPP-GNPQNFDLNEVKAVRLE---TG----KEKRDVMISGLGFITI- 343
Query: 511 LKGEAALGVWTYEGVDIVLRNALL 534
A + V + VD+VLRN++L
Sbjct: 344 -GPGAKVIVRVPKNVDVVLRNSIL 366
>gi|374339364|ref|YP_005096100.1| ribosome biogenesis GTPase YqeH [Marinitoga piezophila KA3]
gi|372100898|gb|AEX84802.1| ribosome biogenesis GTPase YqeH [Marinitoga piezophila KA3]
Length = 373
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 190/455 (41%), Gaps = 96/455 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q +P+ PG+ P K ++NE E
Sbjct: 3 CHGCGVEIQTVDPQKPGFL--PEHVFEK-------FLSNEEE------------------ 35
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+C RC L+HYG+ L+P D +L VL V
Sbjct: 36 ----------ALCQRCFKLKHYGE--------LMP-MKIDINFLSELKKIIKNFDTVLWV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+G++ +++ ++V D V L++ K+DLLP S++ +
Sbjct: 77 IDIIDFEGTYDKQILELVKDK-----------------NVFLIINKVDLLPKSVAFAELK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGN-VWAIGAQNAGKSTL 322
WV +R + D K + +SA KN+G+ L+ L G+ N +G N GKS+L
Sbjct: 120 DWVLERVKNDLNIKKDNIRLISAKKNFGINRLMK---ILKGQNINKAIVVGTTNVGKSSL 176
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
LN I +T + PGTTLG+VR + +L+DTPG+ N
Sbjct: 177 LNTITN----------------VKITTSSFPGTTLGVVR-RKIPDYGIELYDTPGIETNN 219
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV---EESSVESIYVTVWA 439
+ T Q + + + +T++ G I I+ L R + ++ I++ ++A
Sbjct: 220 RFTDFFDIYTQVEMIPKRTISRKTFKPDVGKVIFISSLFRFKILSPAHDDLKPIFL-IFA 278
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
+ H K E +++ G L PP EK ++ ++ + + ++
Sbjct: 279 PENISFHQTKEERVEDLLQNRIGEVLYPPY-EKNYPLDIEYEKEIVMIEENE------EL 331
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
A GLGW SVR +G + V + +++V+R L+
Sbjct: 332 ALPGLGWISVR-RGPLNIEVVKPKNIEMVIRKPLI 365
>gi|451343499|ref|ZP_21912571.1| ribosome biogenesis GTPase YqeH [Eggerthia catenaformis OT 569 =
DSM 20559]
gi|449337862|gb|EMD17018.1| ribosome biogenesis GTPase YqeH [Eggerthia catenaformis OT 569 =
DSM 20559]
Length = 359
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 197/454 (43%), Gaps = 103/454 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +PK PGY P + N R
Sbjct: 6 CYGCGAIIQTNSPKEPGYL--PEKAFNNER------------------------------ 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
V+C RC L HY + + E++ DF K++S G + ++V+
Sbjct: 34 ----------VLCQRCFKLMHYHTKIETSAESI----DF-----VKILSQIGQKDALVVY 74
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
+VD D GS + V V+++ K D+LP SL +
Sbjct: 75 IVDLFDLYGSMIPGFMRHVG-----------------FNDVLVLANKRDVLPKSLKDDKL 117
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
E +VR++ +++ I + + SA KN+ + + + +L R +V+ G N GKS+
Sbjct: 118 ERYVRRQLKKESIKPLDVI-ITSAKKNYNYDLIYESINELRKGR-DVYVTGTTNVGKSSF 175
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N + K +G +T + PGTTLG++++ L + ++DTPG+++ +
Sbjct: 176 INGLLKHYGGIKG----------FITVSEFPGTTLGMIKIP--LDENSAIYDTPGIINNH 223
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV--EESSVESIYVTVWAS 440
Q+T+R+T ++ + E++P T+++ +++ L R+D ++ S T + S
Sbjct: 224 QMTSRVTHKDLVKIIPQSEIRPVTFQLSGNQTLYFGALARLDYLGDKGS-----FTCYFS 278
Query: 441 PYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIA 500
LP+H K ENA + +H ++ I + E ++ KE +I
Sbjct: 279 KNLPIHRTKLENADNLYNRHMELKIGIDISKIEDFETISYMVKE-----------PCEIV 327
Query: 501 AAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLG+ SV G + V G+D+++R ++
Sbjct: 328 ISGLGFISVNALGIIKIHVPV--GIDVIMRERMI 359
>gi|49483844|ref|YP_041068.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
MRSA252]
gi|282904178|ref|ZP_06312066.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C160]
gi|282906005|ref|ZP_06313860.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282908916|ref|ZP_06316734.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|283958360|ref|ZP_06375811.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus A017934/97]
gi|295428174|ref|ZP_06820806.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297590860|ref|ZP_06949498.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MN8]
gi|415682399|ref|ZP_11447715.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS00]
gi|418564794|ref|ZP_13129215.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21264]
gi|418582523|ref|ZP_13146601.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1605]
gi|418597137|ref|ZP_13160670.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21342]
gi|418601018|ref|ZP_13164466.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21345]
gi|418892326|ref|ZP_13446439.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1176]
gi|418898231|ref|ZP_13452301.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|418901101|ref|ZP_13455157.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1214]
gi|418909448|ref|ZP_13463444.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG149]
gi|418917494|ref|ZP_13471453.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1267]
gi|418923278|ref|ZP_13477194.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1233]
gi|418982602|ref|ZP_13530310.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1242]
gi|418986268|ref|ZP_13533953.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1500]
gi|49241973|emb|CAG40668.1| putative GTPase [Staphylococcus aureus subsp. aureus MRSA252]
gi|282327180|gb|EFB57475.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282331297|gb|EFB60811.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282595796|gb|EFC00760.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C160]
gi|283790509|gb|EFC29326.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus A017934/97]
gi|295128532|gb|EFG58166.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297575746|gb|EFH94462.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MN8]
gi|315195499|gb|EFU25886.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS00]
gi|371975931|gb|EHO93223.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21264]
gi|374395373|gb|EHQ66640.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21342]
gi|374400265|gb|EHQ71384.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21345]
gi|377702498|gb|EHT26820.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1214]
gi|377704312|gb|EHT28622.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1500]
gi|377704883|gb|EHT29192.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1242]
gi|377710933|gb|EHT35171.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1605]
gi|377730620|gb|EHT54687.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1176]
gi|377735237|gb|EHT59273.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1233]
gi|377750668|gb|EHT74606.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1267]
gi|377752095|gb|EHT76019.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG149]
gi|377761266|gb|EHT85142.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC341D]
Length = 366
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 189/382 (49%), Gaps = 51/382 (13%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA-SGARSVVLMVVDAADFDGS 212
V+C RC L++Y +V+DV +E+ DF KL+S + + +V+ VVD DF+GS
Sbjct: 35 VICRRCFRLKNYNEVQDVGLES--EDF-------LKLLSGLADKKGIVVNVVDVFDFEGS 85
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
F V ++V GN +++L K+DLLP ++ R + W+++ AR+
Sbjct: 86 FINAVKRIV----------------GN-KKIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 273 DGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
+ + +SA K WG+ L+ + ++ + +V+ +G N GKSTL+N K ++A
Sbjct: 129 YSLEA-DDVVLISAEKGWGIDDLLSSIANIR-ENEDVYIVGTTNVGKSTLIN---KLIEA 183
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
G EK++V T + PGTTL ++ + L + ++DTPG++ +Q+T ++ +E
Sbjct: 184 SVG----EKDVV---TTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHLVSEKE 234
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K++ KE+K R Y++ ++ GL R+D + + S L +H KTE
Sbjct: 235 LKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--ICFFSNDLNIHRTKTEK 292
Query: 453 ACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
A + G L PP L + E D+ +GLG+ ++
Sbjct: 293 ANDLWRNQLGDLLTPP------GNLQNFDLNEVKAVRLETGKEKRDVMISGLGFITI--G 344
Query: 513 GEAALGVWTYEGVDIVLRNALL 534
A + V + VD+VLRN++L
Sbjct: 345 PGAKVIVRVPKNVDVVLRNSIL 366
>gi|242373901|ref|ZP_04819475.1| GTP-binding protein [Staphylococcus epidermidis M23864:W1]
gi|242348455|gb|EES40057.1| GTP-binding protein [Staphylococcus epidermidis M23864:W1]
Length = 366
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 204/452 (45%), Gaps = 93/452 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q + PGY P N+
Sbjct: 7 CIGCGAPLQSEDKNAPGYV--PEHNM---------------------------------- 30
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L++Y +V+DV +++ DF + L S + +V+ V
Sbjct: 31 ------FREDVICQRCFRLKNYNEVQDVGMDSE----DFLNL----LTGLSDQKGIVVNV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GSF + ++V + +++L K+DLLP ++ R +
Sbjct: 77 VDVFDFEGSFINAIKRIVGN-----------------KKIILAANKLDLLPKQINKRRVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+++ AR+ G+ + +SA K WG++ L+ + +V+ +G N GKSTL+
Sbjct: 120 EWLKKSARKYGLEA-EDVVLISADKGWGIEELLQSINQYRNNE-DVYIVGTTNVGKSTLI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + + + G EK++V T + PGTTL ++ + L ++DTPG++ +Q
Sbjct: 178 NKLIE-ISVG------EKDVV---TTSRFPGTTLDMIDIP--LDETTFMYDTPGIIQEHQ 225
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+T ++ +E K + KE+K R Y++ G ++ GL R+D + + S L
Sbjct: 226 MTHYVSEKELKTIMPKKEIKQRVYQLNEGQTLFFGGLARIDYVSGGKRPL--ICFFSNDL 283
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELG-KWVRKEFHVSGSSWDSSSVDIAAA 502
+H KTE A + + G L PP + + K VR E +G + D+ +
Sbjct: 284 NIHRTKTEKANELWKSQLGSVLTPPHNAENFDLNNVKAVRLE---TG----KAKRDVMIS 336
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLG+ ++ A + V + VD++LRN++L
Sbjct: 337 GLGFITI--DEGAKVIVRVPKNVDVILRNSIL 366
>gi|221486959|gb|EEE25205.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 1036
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 140/520 (26%), Positives = 223/520 (42%), Gaps = 74/520 (14%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESE-FSN---SLKKGGLVVFE 139
CPGCG +Q +P G+ V + E FS SL K V E
Sbjct: 371 CPGCGADLQTEDPARHGF----------------VSAEKKDEWFSGRWKSLPKAKGVPVE 414
Query: 140 AENETSEV--------KKHEKPVVCARCHALRHYGKVKD------VTVENLLPDFDFDHT 185
+ + EV +K + ++C RC+ ++ Y ++ + LLP +
Sbjct: 415 SVPDGVEVVTVKSPRFRKRTRLLLCRRCYRIQMYKQLDGDWEAAANAQDQLLPSLSPEAV 474
Query: 186 VGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVL 245
V + ++ SVVL +VD D + S V ++ ++ +S + V+
Sbjct: 475 V-QSIVKTMKKDSVVLKIVDVCDLESSV---VPEL-----------FQACRSKRL-HVIW 518
Query: 246 VVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLI--------- 296
++ ++D LP + + WVR+ R+ I VS+ G L
Sbjct: 519 LINRVDCLPRTAQKREVKEWVRRMVRQIDNVHIDDCILVSSATGHGFDELERRLELLLVP 578
Query: 297 --DDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPG 354
V + G+R ++ +G NAGKST + K ++ G K +T + +PG
Sbjct: 579 TPGGVCTVEGRR--IYVVGRVNAGKSTFVTRFLKFINYKHAGTIFMKRASGGVTRSALPG 636
Query: 355 TTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNI--NKELKPRTYRIKAG 412
TTL + LP KL DTPG+ +QIT+ L L +I +K L+P TY I G
Sbjct: 637 TTLSFLPFG--LPQGFKLIDTPGIPSRHQITSLLPFAAD-LYSIVPSKRLQPITYAITEG 693
Query: 413 HSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEK 472
S+ I L R+D+ + S + +T + S + LH+ KT A ++ + L PP
Sbjct: 694 KSLLIGALARIDLVQGS--TALITCFFSHKITLHICKTVKAADLLSRKACTFLYPPHLPA 751
Query: 473 RVEELGKWVRKEFHV-SGSSWDSSSVDIAAAGLGWFSVR-LKGEAALGVWTYEGVDIVLR 530
++L VR V +G+S + DI+ AGLGW SV G L VW +GV + R
Sbjct: 752 GFDKLQPLVRHSVKVHAGNSL--AYDDISIAGLGWISVAGSAGPKELHVWVPQGVKVFRR 809
Query: 531 NALLPYRSQVFEVAGFTVSKIISKADQSLNKSKRLNEAKR 570
A+LP + + V F ++ + K KR+ EA R
Sbjct: 810 PAMLPRQIRTTGVEEFHGKSPRARGPRINAKKKRMVEALR 849
>gi|237831793|ref|XP_002365194.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|211962858|gb|EEA98053.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
Length = 1036
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 140/520 (26%), Positives = 223/520 (42%), Gaps = 74/520 (14%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESE-FSN---SLKKGGLVVFE 139
CPGCG +Q +P G+ V + E FS SL K V E
Sbjct: 371 CPGCGADLQTEDPARHGF----------------VSAEKKDEWFSGRWKSLPKAKGVPVE 414
Query: 140 AENETSEV--------KKHEKPVVCARCHALRHYGKVKDV------TVENLLPDFDFDHT 185
+ + EV +K + ++C RC+ ++ Y ++ + LLP +
Sbjct: 415 SVPDGVEVVTVKSPRFRKRTRLLLCRRCYRIQMYKQLDGDWEAAANAQDQLLPSLSPEAV 474
Query: 186 VGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVL 245
V + ++ SVVL +VD D + S V ++ ++ +S + V+
Sbjct: 475 V-QSIVKTMKKDSVVLKIVDVCDLESSV---VPEL-----------FQACRSKRL-HVIW 518
Query: 246 VVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLI--------- 296
++ ++D LP + + WVR+ R+ I VS+ G L
Sbjct: 519 LINRVDCLPRTAQKREVKEWVRRMVRQIDNVHIDDCILVSSATGHGFDELERRLELLLVP 578
Query: 297 --DDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPG 354
V + G+R ++ +G NAGKST + K ++ G K +T + +PG
Sbjct: 579 TPGGVCTVEGRR--IYVVGRVNAGKSTFVTRFLKFINYKHAGTIFMKRASGGVTRSALPG 636
Query: 355 TTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNI--NKELKPRTYRIKAG 412
TTL + LP KL DTPG+ +QIT+ L L +I +K L+P TY I G
Sbjct: 637 TTLSFLPFG--LPQGFKLIDTPGIPSRHQITSLLPFAAD-LYSIVPSKRLQPITYAITEG 693
Query: 413 HSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEK 472
S+ I L R+D+ + S + +T + S + LH+ KT A ++ + L PP
Sbjct: 694 KSLLIGALARIDLVQGS--TALITCFFSHKITLHICKTVKAADLLSRKACTFLYPPHLPA 751
Query: 473 RVEELGKWVRKEFHV-SGSSWDSSSVDIAAAGLGWFSVR-LKGEAALGVWTYEGVDIVLR 530
++L VR V +G+S + DI+ AGLGW SV G L VW +GV + R
Sbjct: 752 GFDKLQPLVRHSVKVHAGNSL--AYDDISIAGLGWISVAGSAGPKELHVWVPQGVKVFRR 809
Query: 531 NALLPYRSQVFEVAGFTVSKIISKADQSLNKSKRLNEAKR 570
A+LP + + V F ++ + K KR+ EA R
Sbjct: 810 PAMLPRQIRTTGVEEFHGKSPRARGPRINAKKKRMVEALR 849
>gi|221506643|gb|EEE32260.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 1037
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 139/520 (26%), Positives = 222/520 (42%), Gaps = 74/520 (14%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESE-FSN---SLKKGGLVVFE 139
CPGCG +Q +P G+ V + E FS SL K V E
Sbjct: 372 CPGCGADLQTEDPARHGF----------------VSAEKKDEWFSGRWKSLPKAKGVPVE 415
Query: 140 AENETSEV--------KKHEKPVVCARCHALRHYGKVKD------VTVENLLPDFDFDHT 185
+ + EV +K + ++C RC+ ++ Y ++ + LLP +
Sbjct: 416 SVPDGVEVVTVKSPRFRKRTRLLLCRRCYRIQMYKQLDGDWEAAANAQDQLLPSLSPEAV 475
Query: 186 VGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVL 245
V + ++ SVVL +VD D + S ++ ++ +S + V+
Sbjct: 476 V-QSIVKTMKKDSVVLKIVDVCDLESSVVPEL--------------FQACRSKRL-HVIW 519
Query: 246 VVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLI--------- 296
++ ++D LP + + WVR+ R+ I VS+ G L
Sbjct: 520 LINRVDCLPRTAQKREVKEWVRRMVRQIDNVHIDDCILVSSATGHGFDELERRLELLLVP 579
Query: 297 --DDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPG 354
V + G+R ++ +G NAGKST + K ++ G K +T + +PG
Sbjct: 580 TPGGVCTVEGRR--IYVVGRVNAGKSTFVTRFLKFINYKHAGTIFMKRASGGVTRSALPG 637
Query: 355 TTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNI--NKELKPRTYRIKAG 412
TTL + LP KL DTPG+ +QIT+ L L +I +K L+P TY I G
Sbjct: 638 TTLSFLPFG--LPQGFKLIDTPGIPSRHQITSLLPFAAD-LYSIVPSKRLQPITYAITEG 694
Query: 413 HSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEK 472
S+ I L R+D+ + S + +T + S + LH+ KT A ++ + L PP
Sbjct: 695 KSLLIGALARIDLVQGS--TALITCFFSHKITLHICKTVKAADLLSRKACTFLYPPHLPA 752
Query: 473 RVEELGKWVRKEFHV-SGSSWDSSSVDIAAAGLGWFSVR-LKGEAALGVWTYEGVDIVLR 530
++L VR V +G+S + DI+ AGLGW SV G L VW +GV + R
Sbjct: 753 GFDKLQPLVRHSVKVHAGNSL--AYDDISIAGLGWISVAGSAGPKELHVWVPQGVKVFRR 810
Query: 531 NALLPYRSQVFEVAGFTVSKIISKADQSLNKSKRLNEAKR 570
A+LP + + V F ++ + K KR+ EA R
Sbjct: 811 PAMLPRQIRTTGVEEFHGKSPRARGPRINAKKKRMVEALR 850
>gi|150020690|ref|YP_001306044.1| HSR1-like GTP-binding protein [Thermosipho melanesiensis BI429]
gi|149793211|gb|ABR30659.1| GTP-binding protein, HSR1-related [Thermosipho melanesiensis BI429]
Length = 357
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 198/461 (42%), Gaps = 116/461 (25%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q +PK PGY P H+ E
Sbjct: 3 CKGCGVELQTVDPKKPGYV--PE------------HILLE-------------------- 28
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
E+P+ C RC+ + HYGK+ E + D KL + V+ V
Sbjct: 29 ------EEEPL-CQRCYRIIHYGKLTVPVEEEIFLD---------KLNKVLKDFNKVIYV 72
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+G+F +++ + + + V VTK DLLPS LS +
Sbjct: 73 VDITDFEGTFRKEIMEKLKNK-----------------EVYFAVTKFDLLPSFLSSIEAQ 115
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+++R G+S + +S+V +GL+ + + +L + ++ +G N GKS+L
Sbjct: 116 EWLKKRL---GVSS-EYIFLLSSVNKFGLRKIEKFLKNL---KEDILILGVTNVGKSSL- 167
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEA-----PVPGTTLGIV--RVEGVLPAQAKLFDTP 376
+SH T+A P PGTTLGI+ R+ G+ L+DTP
Sbjct: 168 --------------------ISHFTDANPTISPFPGTTLGIMKRRIFGI-----NLYDTP 202
Query: 377 GLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVT 436
G+L ++I L+ + Q + K L +T++I + ++ ++ +++VE +
Sbjct: 203 GILTHDRIIDLLSPDCQAKILNTKRLTRKTFKIDSTRAVLVSAYCKIEVEYDMGKKPIFQ 262
Query: 437 VWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSS 496
++ + H K E A ++ G L PP +++++ ++V E V
Sbjct: 263 IFTPEKVTFHETKKERADELMRNRAGDLLVPPCKKEKLD--FEFVTHEIEVDEEK----- 315
Query: 497 VDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYR 537
++A GLG+ +V+ +G L + +G+ I+ RN LL R
Sbjct: 316 -EVAITGLGFLNVK-RGPFLLKITVPKGIRIIKRNRLLKPR 354
>gi|314933767|ref|ZP_07841132.1| ribosome biogenesis GTPase YqeH [Staphylococcus caprae C87]
gi|313653917|gb|EFS17674.1| ribosome biogenesis GTPase YqeH [Staphylococcus caprae C87]
Length = 366
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 201/455 (44%), Gaps = 91/455 (20%)
Query: 80 KLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFE 139
+L C GCG +Q + PGY P N+
Sbjct: 3 ELLKCIGCGAPLQSEDKNAPGYV--PEHNM------------------------------ 30
Query: 140 AENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSV 199
+ V+C RC L++Y +V+DV +++ DF L S +
Sbjct: 31 ----------FREDVICQRCFRLKNYNEVQDVGMDS--EDF------LNLLTGLSNKSGI 72
Query: 200 VLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSP 259
V+ VVD DF+GSF + ++V GN +++L K+DLLP ++
Sbjct: 73 VVNVVDVFDFEGSFINAIKRIV----------------GN-KKIILAANKLDLLPKQINQ 115
Query: 260 TRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGK 319
R + W+++ AR+ G+ + +SA K WG++ L+ + + +V+ +G N GK
Sbjct: 116 RRVKEWLKKTARKYGLEA-DDVVLISADKGWGIEELMQSINQVRNNE-DVYVVGTTNVGK 173
Query: 320 STLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLL 379
STL+N + + + G EK++V T + PGTTL ++ + L ++DTPG++
Sbjct: 174 STLINKLIE-ISVG------EKDVV---TTSRFPGTTLDMIDIP--LDETTFMYDTPGII 221
Query: 380 HPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWA 439
+Q+T ++ E K + KE+K R Y++ ++ GL R+D S+ +
Sbjct: 222 QEHQMTNYVSDIELKTIMPKKEIKQRVYQLNEEQTLFFGGLARIDYVSGGKRSL--VCFF 279
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
S L +H KTE A + + G L PP + ++ + + D+
Sbjct: 280 SNDLNIHRTKTEKANELWKNQLGSLLTPP------HDASQFDLNDVKAVRLETGKAKRDV 333
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLG+ ++ A + V + VD++LRN++L
Sbjct: 334 MISGLGFITI--DEGAKVIVRVPKNVDVILRNSIL 366
>gi|217077039|ref|YP_002334755.1| GTP-binding protein [Thermosipho africanus TCF52B]
gi|217036892|gb|ACJ75414.1| GTP-binding protein [Thermosipho africanus TCF52B]
Length = 358
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 189/451 (41%), Gaps = 101/451 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T+PK PGY +
Sbjct: 3 CRGCGAELQYTDPKKPGYIPK--------------------------------------- 23
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
E+ ++E +C RC+ + HYGK+ E + F H + + + + VL V
Sbjct: 24 --EILENEPDPLCQRCYRIIHYGKLTVPVQEEI-----FLHQIDKVIKNFEK----VLYV 72
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+G++ ++ + + +GK V +TK DLLP SLS +
Sbjct: 73 IDITDFEGTYRSEIMEKL------------QGKD-----VYFAITKFDLLPRSLSSIEAQ 115
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+++R K+ S+ +GLK L D + ++ +G N GKS+LL
Sbjct: 116 EWLKKRLNTTS----EKIFLTSSKNGFGLKKLEKFFKD---SKKDILIVGVTNVGKSSLL 168
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
+A K H T +P PGTTLGIV+ + ++DTPG+L ++
Sbjct: 169 SAFTKE----------------HPTISPFPGTTLGIVKRKVF---NTYIYDTPGILTNDR 209
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ E Q + L +T++I +I ++ +++VE + ++A +
Sbjct: 210 VIDLLSPECQAKILKTNNLTRKTFKIDQSRAILVSAFCKIEVEFDGDKKPIFQIFAPEKV 269
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
H K+E A ++ + G LQPP + ++ K+ F D +I+ G
Sbjct: 270 TFHETKSERADQLIHQRAGDLLQPPC---KKTDMSKY---NFKTERILVDQKQ-EISING 322
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
L + +++ +G + E +++ LR+ LL
Sbjct: 323 LCFINIK-RGPFVAKITVPENINVTLRDRLL 352
>gi|228910174|ref|ZP_04073993.1| hypothetical protein bthur0013_43220 [Bacillus thuringiensis IBL
200]
gi|228849457|gb|EEM94292.1| hypothetical protein bthur0013_43220 [Bacillus thuringiensis IBL
200]
Length = 318
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 168/376 (44%), Gaps = 82/376 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q N GY P+ +L K
Sbjct: 7 CIGCGVEIQTENKNEVGY--APTSSLEK-------------------------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ V+C RC L+HY +++DV+ L D DF R L + ++V+ +
Sbjct: 33 --------EQVICQRCFRLKHYNEIQDVS----LTDDDF----LRILNGIGKSDALVVKI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS+ + + V + +V+LV K DL+P S+ + +
Sbjct: 77 VDIFDFNGSWLPGLHRFVGNN-----------------KVLLVGNKADLIPKSVKHDKVK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
HW+R A++ G+ K + +SA K G+ L D + G + +V+ +G N GKST +
Sbjct: 120 HWMRYSAKQLGL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFI 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + K E +N++ T + PGTTL ++ + L ++ L+DTPG+++ +Q
Sbjct: 178 NRMIKEFS------DETENVI---TTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQ 226
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + ++ KL+ KE+KP +++ ++ +GL R D + T S L
Sbjct: 227 MAHYVGKQSLKLITPTKEIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRL 284
Query: 444 PLHMGKTENACTMVEK 459
+H K E A + +K
Sbjct: 285 TIHRTKLEKADELYKK 300
>gi|223044373|ref|ZP_03614407.1| ribosome biogenesis GTPase YqeH [Staphylococcus capitis SK14]
gi|417907787|ref|ZP_12551554.1| ribosome biogenesis GTPase YqeH [Staphylococcus capitis VCU116]
gi|222442242|gb|EEE48353.1| ribosome biogenesis GTPase YqeH [Staphylococcus capitis SK14]
gi|341594874|gb|EGS37552.1| ribosome biogenesis GTPase YqeH [Staphylococcus capitis VCU116]
Length = 366
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 202/455 (44%), Gaps = 91/455 (20%)
Query: 80 KLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFE 139
+L C GCG +Q + PGY P N+
Sbjct: 3 ELLKCIGCGAPLQSEDKNAPGYV--PEHNM------------------------------ 30
Query: 140 AENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSV 199
+ V+C RC L++Y +V+DV +++ DF + L S +
Sbjct: 31 ----------FREDVICQRCFRLKNYNEVQDVGMDSE----DFLNL----LTGLSNKSGI 72
Query: 200 VLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSP 259
V+ VVD DF+GSF + ++V GN +++L K+DLLP ++
Sbjct: 73 VVNVVDVFDFEGSFINAIKRIV----------------GN-KKIILAANKLDLLPKQINQ 115
Query: 260 TRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGK 319
R + W+++ AR+ G+ + +SA K WG++ L+ + + +V+ +G N GK
Sbjct: 116 RRVKEWLKKTARKYGLEA-DDVVLISADKGWGIEELMQSINQVRNNE-DVYVVGTTNVGK 173
Query: 320 STLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLL 379
ST +N + + + G EK++V T + PGTTL ++ + L ++DTPG++
Sbjct: 174 STFINKLIE-ISVG------EKDVV---TTSRFPGTTLDMIDIP--LDETTFMYDTPGII 221
Query: 380 HPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWA 439
+Q+T ++ +E K + KE+K R Y++ ++ GL R+D S+ +
Sbjct: 222 QEHQMTNYVSDKELKTIMPKKEIKQRVYQLNEEQTLFFGGLARIDYVSGGKRSL--VCFF 279
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
S L +H KTE A + + G L PP + ++ + + D+
Sbjct: 280 SNDLNIHRTKTEKANELWKNQLGSLLTPP------HDASQFDLNDVKAVRLETGKAKRDV 333
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+GLG+ ++ A + V + VD++LRN++L
Sbjct: 334 MISGLGFITI--DEGAKVIVRVPKNVDVILRNSIL 366
>gi|154249877|ref|YP_001410702.1| HSR1-like GTP-binding protein [Fervidobacterium nodosum Rt17-B1]
gi|154153813|gb|ABS61045.1| GTP-binding protein HSR1-related [Fervidobacterium nodosum Rt17-B1]
Length = 376
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 196/463 (42%), Gaps = 118/463 (25%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
CPGCG +Q P PG+ P+ + LK+G
Sbjct: 11 CPGCGSKIQHDKPGKPGFI--PA-----------------DVYERRLKEG---------- 41
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
K ++C RC L+HYG L+ + D D + + + R+ + V
Sbjct: 42 --------KEILCQRCFKLKHYGM--------LVGEVDEDEIIDFLRKTVTKFRN-FMYV 84
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+G++ ++ +M+ D V+ VV K D+LP S+S + +
Sbjct: 85 LDIFDFEGTYRPEINEMIKDK-----------------NVIYVVNKFDILPKSVSGAQLK 127
Query: 264 HWVRQR---AREDGISKITKLHFVSAVKN-WGLKSLIDDVVDLAGKRGNVWAIGAQNAGK 319
W+ R A D I F+++ KN +G+ L + +L RG + +G N GK
Sbjct: 128 KWLTDRINNANSDNI-------FITSTKNEFGISKLKKYLENL---RGEMLVLGVTNVGK 177
Query: 320 STLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLL 379
S+LL + S +T +P PGTT+GIV+ + K++DTPG++
Sbjct: 178 SSLLKKLTN----------------SKVTVSPYPGTTIGIVKHK---LKNLKVYDTPGII 218
Query: 380 HPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESI--YVTV 437
+++ E Q + E+ +T++ I I GL ++ + + ES+ +
Sbjct: 219 VNDRMIDLFDAECQAKILAKGEVNRKTFKPYPEEVIFIGGLCKISAKMKNEESLRPIFQI 278
Query: 438 WASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSV 497
+A + H K +N K+FG++L PP K+ +SG ++ + S+
Sbjct: 279 FAPENVSFHKTKNKNFIDNFPKYFGKELVPPC-------------KKMDISGLNFKNLSI 325
Query: 498 DI------AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
++ + GL W +++ +G V+ E V + +R +L+
Sbjct: 326 EVNEGFELSIPGLCWINIK-RGPVQFDVYLPENVSVYIRPSLI 367
>gi|333371748|ref|ZP_08463690.1| GTP-binding protein [Desmospora sp. 8437]
gi|332975677|gb|EGK12563.1| GTP-binding protein [Desmospora sp. 8437]
Length = 367
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 185/452 (40%), Gaps = 93/452 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q +P+ PGY P L +
Sbjct: 8 CEGCGVPLQTEHPEKPGYV--PPAALER-------------------------------- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
E P+ C RC +RHY +V V + D ++ G R ++V+
Sbjct: 34 -------EHPI-CKRCFRIRHYNEVAQV---------EHDPDAYLAMLGEIGNRQALVVQ 76
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD D GS+ + + +G P ++++ K+DL P S R
Sbjct: 77 VVDLFDLSGSWIPGIQR----------------HTGGNP-ILILGNKLDLFPKSAKVQRL 119
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+ WV E G+ + + SA K + ++ + +V+ G N GKSTL
Sbjct: 120 KEWVYHTVSELGVKPVDVV-LTSAAKGVHFDE-VARAIETCREGRDVFVTGTANVGKSTL 177
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N + K G GEE +T +P PGTTL + + L +L D PG++ +
Sbjct: 178 INRLLKEF-----GSGEEV-----ITTSPYPGTTLDTIHIP--LEGGRELVDMPGIVRRD 225
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
+++ + +E + E+KP+ Y++ G ++ GL RMD E + + S Y
Sbjct: 226 RMSEWVAPDELGEITPKSEIKPKVYQLNDGQTLFFGGLARMDYSEGVRQPFVCHMANSLY 285
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+H K +A + EKH G L PP K L VR FH+ G D+ +
Sbjct: 286 --IHRTKLAHADEVWEKHRGELLSPP---KDPSSLPPLVRHTFHLDG----KQKQDLVIS 336
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW + K A + +W GV + +R A+L
Sbjct: 337 GLGWIATG-KERARVELWVPRGVRVEVRPAIL 367
>gi|449015954|dbj|BAM79356.1| similar to GTP-binding protein [Cyanidioschyzon merolae strain 10D]
Length = 674
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 197/466 (42%), Gaps = 82/466 (17%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
CPGCG +QD +P PGY P++ L KG
Sbjct: 251 CPGCGAHLQDDDPDAPGYL--PARALRP--------------------KG---------- 278
Query: 144 TSEVKKHEKPV---VCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVV 200
+ EKP+ VC RC L HY K+ + + P+ F L + R+VV
Sbjct: 279 ----QNAEKPLTSKVCQRCFHLTHYSKISAKGLTLMSPE-QFREI----LAPLAKQRAVV 329
Query: 201 LMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPT 260
+ ++D D S ++V+++ + + V++V+ K DLLPSS+
Sbjct: 330 VCMLDILDLSSSMLKEVSQLANAQSP----------------VLVVINKADLLPSSVKLG 373
Query: 261 RFEHWVRQRAREDGISKITK-LHFVSAVKNWGLKSLIDDVVDLA--GKRGNVWAIGAQNA 317
W+ +R G+ + + ++ +SA + G++ + +V A + +++ +GA N
Sbjct: 374 HIMQWIWKRCAASGMRRRPRAVYLISAERGLGIRGFVQGLVAAARESRTDHIYIMGAANV 433
Query: 318 GKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRV---EGVLPAQAKLFD 374
GKSTLLN I RG G LT + VPGTTLG+VR+ + + D
Sbjct: 434 GKSTLLNRII------RGHPGHGSKPTRELTTSVVPGTTLGMVRLPLKNAATGERIVIMD 487
Query: 375 TPGLLHPNQITTRLTRE--EQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES 432
TPG++ P ++ + E K + + L+ TYR++ G S+ + GL+ + + E +
Sbjct: 488 TPGIVEPRRVNLLCLEDISEMKGILPRRRLRGITYRLEQGKSLWLGGLVNIALAEG--KP 545
Query: 433 IYVTVWASPYLPLHM---GKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSG 489
+ T + S + +H+ K N V+ L P G RV L V
Sbjct: 546 WFFTAYVSEQVTVHVSDASKALNETYRVQSVKNGLLWP--GGLRV-PLATVEPVRMCVEH 602
Query: 490 SSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLP 535
+W + DI GLGW ++ G + V G + + L P
Sbjct: 603 GTWKRTCADIVIPGLGWVALLGSGSCTVHVRVAGGGTVWKQEPLAP 648
>gi|167756987|ref|ZP_02429114.1| hypothetical protein CLORAM_02536 [Clostridium ramosum DSM 1402]
gi|237732927|ref|ZP_04563408.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|365833456|ref|ZP_09374972.1| ribosome biogenesis GTPase YqeH [Coprobacillus sp. 3_3_56FAA]
gi|374625564|ref|ZP_09697980.1| ribosome biogenesis GTPase YqeH [Coprobacillus sp. 8_2_54BFAA]
gi|167703162|gb|EDS17741.1| ribosome biogenesis GTPase YqeH [Clostridium ramosum DSM 1402]
gi|229383996|gb|EEO34087.1| conserved hypothetical protein [Coprobacillus sp. D7]
gi|365257900|gb|EHM87923.1| ribosome biogenesis GTPase YqeH [Coprobacillus sp. 3_3_56FAA]
gi|373915224|gb|EHQ46995.1| ribosome biogenesis GTPase YqeH [Coprobacillus sp. 8_2_54BFAA]
Length = 365
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 196/407 (48%), Gaps = 57/407 (14%)
Query: 133 GGLVVFEAENETSEVKKH--EKPVV-CARCHALRHYGKVK--DVTVENLLPDFDFDHTVG 187
G ++ E E + V K+ EK V+ C RC L++Y +++ D+T ++ L
Sbjct: 11 GAIIQSEDEKKIGFVPKNALEKDVILCKRCFRLKNYHELQKTDLTSDDFL---------- 60
Query: 188 RKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVV 247
+ L +V+ +VD D++GS +++ +++ ++++
Sbjct: 61 KILQEIGNHDCLVVYLVDLFDYNGSLINGLSRHLNNND-----------------ILVLG 103
Query: 248 TKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG 307
K D+LP SL + EHW+R++ +E GI I + S KN+ L LID + + R
Sbjct: 104 NKRDILPKSLKDRKIEHWLRRQLKESGIKPIDVI-LSSGTKNYNLDLLIDKINEYRHGR- 161
Query: 308 NVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP 367
+V+ +G N GKS+L+N++ K G N++ T + PGTTL ++ + L
Sbjct: 162 DVYIVGVTNVGKSSLINSLLKHY------AGVTDNLI---TTSEFPGTTLDLIEIP--LD 210
Query: 368 AQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEE 427
+ L+D+PG+++ +Q+ + E+ +++ EL+P +++ +++ GL R+D +
Sbjct: 211 DKNYLYDSPGIINNHQMAHLVKDEDLRIIIPKSELRPINFQLNDQQTLYFGGLARVDFIK 270
Query: 428 SSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHV 487
S T + L +H K N+ + +H L P I + ++++ + +F +
Sbjct: 271 GPRSSF--TCFFPKLLKIHRTKLGNSDNLYNRHL--TLMPEI--ESIKDINEMASYDFKL 324
Query: 488 SGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+DI +GLG+ SV A + V +GV + +R AL+
Sbjct: 325 P-----EGKIDIVISGLGFVSVNCPN-ANVRVHAPQGVGVFIREALI 365
>gi|224543253|ref|ZP_03683792.1| hypothetical protein CATMIT_02453 [Catenibacterium mitsuokai DSM
15897]
gi|224523786|gb|EEF92891.1| ribosome biogenesis GTPase YqeH [Catenibacterium mitsuokai DSM
15897]
Length = 362
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 195/451 (43%), Gaps = 94/451 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q + K PGY P L+K
Sbjct: 6 CYGCGAIIQSADTKKPGYV--PESALSK-------------------------------- 31
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ ++C RC+ L HY + +E+ L DF R L + +V+ +
Sbjct: 32 --------EKILCQRCYKLMHYHQ----KMESHLTKDDF----LRVLQTVGEKDCLVVYI 75
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+GS + + + V+++ K D+LP SL R
Sbjct: 76 VDLFDFNGSLVPGLMRHIG-----------------YNDVLVLANKRDILPKSLKEHRLN 118
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
WVR++ +E GI + + S KN + D + + R +V+ +G N GKST +
Sbjct: 119 TWVRRQFKEYGIKPLDVV-VTSGKKNMNFDEIFDKIDEYRHGR-DVYVVGITNVGKSTFI 176
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + K+ + N++ T + PGTTL ++++ L + L+DTPG+L+ +Q
Sbjct: 177 NRMLKNY-------SDTTNLI---TTSEFPGTTLDLIKIP--LDDHSSLYDTPGILNEHQ 224
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
T+ + ++ + E++P ++++ + SI +G R+D + + + + S +
Sbjct: 225 YTSIVDEKDLAYIMPQGEVRPMSFQLNSDQSIFFSGFARIDYTKGNKGNF--ICYFSRNM 282
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
+H KTE A + +H +QLQ ++E+ + EF + DI +G
Sbjct: 283 QIHRTKTEKADELFNRH--KQLQVYGPASSMKEMKAY---EF-----TLPEEKRDIVISG 332
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LG+ + + + V+ +G+D+ +R +L+
Sbjct: 333 LGFVCIH-APKGKIKVYVPDGIDVFMRESLI 362
>gi|418160455|ref|ZP_12797154.1| hypothetical protein SPAR43_1796 [Streptococcus pneumoniae GA17227]
gi|353822188|gb|EHE02364.1| hypothetical protein SPAR43_1796 [Streptococcus pneumoniae GA17227]
Length = 243
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 136/267 (50%), Gaps = 25/267 (9%)
Query: 268 QRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIA 327
+RA E+G+ + + SA +K +ID + R +V+ +G N GKSTL+NAI
Sbjct: 2 ERAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAII 59
Query: 328 KSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR 387
+ + ++N++ T + PGTTL ++E L + ++DTPG++H +Q+
Sbjct: 60 QEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHY 107
Query: 388 LTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHM 447
LT + K V+ KE+KP+TY++ ++ + GL R D + T + L LH
Sbjct: 108 LTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHR 165
Query: 448 GKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWF 507
K E A +KH G L PP K E+ K V+ F++ D+ +GLGW
Sbjct: 166 TKLEGASAFYDKHVGTLLTPP-NSKEKEDFPKLVQHVFNI------KEKTDLVISGLGW- 217
Query: 508 SVRLKGEAALGVWTYEGVDIVLRNALL 534
+R+ G A + VW EGV +V R A++
Sbjct: 218 -IRVTGTAKVAVWAPEGVAVVTRKAII 243
>gi|419759618|ref|ZP_14285909.1| GTP-binding protein [Thermosipho africanus H17ap60334]
gi|407515351|gb|EKF50117.1| GTP-binding protein [Thermosipho africanus H17ap60334]
Length = 358
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 188/451 (41%), Gaps = 101/451 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q T+P PGY +
Sbjct: 3 CRGCGAELQYTDPTKPGYIPK--------------------------------------- 23
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
E+ ++E +C RC+ + HYGK+ E + F H + + + + VL V
Sbjct: 24 --EILENEPDPLCQRCYRIIHYGKLTVPVQEEI-----FLHQIDKVIKNFEK----VLYV 72
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DF+G++ ++ + + +GK V +TK DLLP SLS +
Sbjct: 73 IDITDFEGTYRSEIMEKL------------QGKD-----VYFAITKFDLLPRSLSSIEAQ 115
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+++R K+ S+ +GLK L D + ++ +G N GKS+LL
Sbjct: 116 EWLKKRLNATS----EKIFLTSSKNGFGLKKLEKFFKD---SKKDILIVGVTNVGKSSLL 168
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
+A K H T +P PGTTLGIV+ + ++DTPG+L ++
Sbjct: 169 SAFTKE----------------HPTISPFPGTTLGIVKRKVF---NTYIYDTPGILTNDR 209
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ L+ E Q + L +T++I +I ++ +++VE + ++A +
Sbjct: 210 VIDLLSPECQAKILKTNNLTRKTFKIDQSRAILVSAFCKIEVEFDGDKKPIFQIFAPEKV 269
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
H K+E A ++ + G LQPP + ++ K+ F D +I+ G
Sbjct: 270 TFHETKSERADQLIHQRAGDLLQPPC---KKTDMSKY---NFKTERILVDQKQ-EISING 322
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
L + +++ +G + E +++ LR+ LL
Sbjct: 323 LCFINIK-RGPFVAKITVPENINVTLRDRLL 352
>gi|418108181|ref|ZP_12745218.1| hypothetical protein SPAR70_1728 [Streptococcus pneumoniae GA41410]
gi|418158051|ref|ZP_12794767.1| hypothetical protein SPAR41_1834 [Streptococcus pneumoniae GA16833]
gi|353778458|gb|EHD58926.1| hypothetical protein SPAR70_1728 [Streptococcus pneumoniae GA41410]
gi|353824499|gb|EHE04673.1| hypothetical protein SPAR41_1834 [Streptococcus pneumoniae GA16833]
Length = 243
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 137/267 (51%), Gaps = 25/267 (9%)
Query: 268 QRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIA 327
+RA E+G+ + + SA +K +ID + R +V+ +G N GKSTL+NAI
Sbjct: 2 KRAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAII 59
Query: 328 KSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR 387
+ + ++N++ T + PGTTL ++E L + ++DTPG++H +Q+
Sbjct: 60 QEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHY 107
Query: 388 LTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHM 447
LT + K V+ KE+KP+TY++ ++ + GL R D + T + L LH
Sbjct: 108 LTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHR 165
Query: 448 GKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWF 507
K E A +KH G L PP K E+ + V+ F + + D+ +GLGW
Sbjct: 166 SKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVISGLGW- 217
Query: 508 SVRLKGEAALGVWTYEGVDIVLRNALL 534
+R+ G A + VW EGV +V+R A++
Sbjct: 218 -IRVTGIAKVAVWAPEGVAVVIRKAII 243
>gi|421213686|ref|ZP_15670640.1| hypothetical protein AMCSP12_001572 [Streptococcus pneumoniae
2070108]
gi|395578917|gb|EJG39427.1| hypothetical protein AMCSP12_001572 [Streptococcus pneumoniae
2070108]
Length = 243
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 137/267 (51%), Gaps = 25/267 (9%)
Query: 268 QRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIA 327
+RA E+G+ + + SA +K +ID + + K +V+ +G N GKSTL+NAI
Sbjct: 2 KRAHEEGLRPVDVV-LTSAQNKHAIKEVIDKI-EYYRKGRDVYVVGVTNVGKSTLINAII 59
Query: 328 KSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR 387
+ + ++N++ T + PGTTL ++E L + ++DTPG++H +Q+
Sbjct: 60 QEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHY 107
Query: 388 LTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHM 447
LT + K V+ KE+KP+TY++ ++ + GL R D + T + L LH
Sbjct: 108 LTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHR 165
Query: 448 GKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWF 507
K E A +KH G L PP K E+ + V+ F + + D+ +GLGW
Sbjct: 166 SKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVISGLGW- 217
Query: 508 SVRLKGEAALGVWTYEGVDIVLRNALL 534
+R+ G A + VW EGV +V R A++
Sbjct: 218 -IRVTGTAKVAVWAPEGVAVVTRKAII 243
>gi|418096859|ref|ZP_12733970.1| hypothetical protein SPAR40_1790 [Streptococcus pneumoniae GA16531]
gi|353768580|gb|EHD49104.1| hypothetical protein SPAR40_1790 [Streptococcus pneumoniae GA16531]
Length = 243
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 136/267 (50%), Gaps = 25/267 (9%)
Query: 268 QRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIA 327
+RA E+G+ + + SA +K +ID + R +V+ +G N GKSTL+NAI
Sbjct: 2 KRAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAII 59
Query: 328 KSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR 387
+ + ++N++ T + PGTTL ++E L + ++DTPG++H +Q+
Sbjct: 60 QEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHY 107
Query: 388 LTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHM 447
LT + K V+ KE+KP+TY++ ++ + GL R D + T + L LH
Sbjct: 108 LTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHR 165
Query: 448 GKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWF 507
K E A +KH G L PP K E+ + V+ F + + D+ +GLGW
Sbjct: 166 SKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVISGLGW- 217
Query: 508 SVRLKGEAALGVWTYEGVDIVLRNALL 534
+R+ G A + VW EGV +V R A++
Sbjct: 218 -IRVTGTAKVAVWAPEGVAVVTRKAII 243
>gi|417699129|ref|ZP_12348300.1| hypothetical protein SPAR69_1686 [Streptococcus pneumoniae GA41317]
gi|421218401|ref|ZP_15675295.1| hypothetical protein AMCSP13_002051 [Streptococcus pneumoniae
2070335]
gi|332199775|gb|EGJ13850.1| hypothetical protein SPAR69_1686 [Streptococcus pneumoniae GA41317]
gi|395583170|gb|EJG43619.1| hypothetical protein AMCSP13_002051 [Streptococcus pneumoniae
2070335]
Length = 243
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 136/267 (50%), Gaps = 25/267 (9%)
Query: 268 QRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIA 327
+RA E+G+ + + SA +K +ID + R +V+ +G N GKSTL+NAI
Sbjct: 2 KRAHEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAII 59
Query: 328 KSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR 387
+ + ++N++ T + PGTTL ++E L + ++DTPG++H +Q+
Sbjct: 60 QEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHY 107
Query: 388 LTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHM 447
LT + K V+ KE+KP+TY++ ++ + GL R D + T + L LH
Sbjct: 108 LTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHR 165
Query: 448 GKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWF 507
K E A +KH G L PP K E+ + V+ F + + D+ +GLGW
Sbjct: 166 SKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVISGLGW- 217
Query: 508 SVRLKGEAALGVWTYEGVDIVLRNALL 534
+R+ G A + VW EGV +V R A++
Sbjct: 218 -IRVTGIAKVAVWAPEGVAVVTRKAII 243
>gi|328773495|gb|EGF83532.1| hypothetical protein BATDEDRAFT_85971 [Batrachochytrium
dendrobatidis JAM81]
Length = 496
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 197/467 (42%), Gaps = 56/467 (11%)
Query: 76 EATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGL 135
A K ++C GCG Q +P GY L RK+ + A ++ +S++ L
Sbjct: 55 RAGSKPSICVGCGAAFQHHSPISAGYI----PELAYSRKASITPAA-IAKLKDSIEP--L 107
Query: 136 VVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG 195
+ + + K+ + +C RCH L+H+ K + F H+ + L + +G
Sbjct: 108 SPSQVKTLINASKEEKVVPICQRCHNLKHHNK------SQVPATFSTVHSQFKSLKTRTG 161
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS 255
+V+++VD D + + +V + V++ + KIDL+P
Sbjct: 162 G--LVVLIVDVYDLPCTLLPNLRDLV-----------------GMKNVIVAINKIDLIPK 202
Query: 256 SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQ 315
+P ++ WVR R + + + +SA K G+ SL+ +VD +++ +GA
Sbjct: 203 KDTPKQYIDWVRSRIQTSRHTGPISIIPISATKGTGIDSLVKAIVDNRNSNEDIYMVGAT 262
Query: 316 NAGKSTLLNAIAKSVDAGRGGDGEEKNIV-SHLTEAPVPGTTLGIVRVEGVL-------- 366
N GKS+++N I AG G N + + P+P ++ G L
Sbjct: 263 NVGKSSVINQIV--THAGYKGFLTTSNFAGTTIAPVPIPISSFGTQFFPNSLGDISDPDH 320
Query: 367 ---PAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRM 423
L DT G + Q+T L E + V ++PR ++ G +I L+R+
Sbjct: 321 DARKDTGHLIDTVGTYNSQQLTHFLASTEFQFVVPKTSIRPRKVNLRPGKNIWFGALVRL 380
Query: 424 DVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFG---RQLQPPIGEKRVEELGKW 480
++ ++ S + + LP+H + ++ ++H G + + PP G+ R+ L +
Sbjct: 381 EIVKTKTASSF-WFYGCHVLPIHGCRESRMASLWDEHAGINSQIMTPPYGKDRINALPPF 439
Query: 481 VRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDI 527
S S ++ I GLGW + + GE VWT GV I
Sbjct: 440 AI----ASESRYNKDGTRIWLGGLGW--IVMYGELHFRVWTPGGVGI 480
>gi|421245585|ref|ZP_15702083.1| GTP-binding protein [Streptococcus pneumoniae 2081685]
gi|395608112|gb|EJG68208.1| GTP-binding protein [Streptococcus pneumoniae 2081685]
Length = 243
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 136/267 (50%), Gaps = 25/267 (9%)
Query: 268 QRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIA 327
+RA E+G+ + + SA +K +ID + R +V+ +G N GKSTL+NAI
Sbjct: 2 KRAYEEGLRPVDVV-LTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAII 59
Query: 328 KSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR 387
+ + ++N++ T + PGTTL ++E L + ++DTPG++H +Q+
Sbjct: 60 QEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHY 107
Query: 388 LTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHM 447
LT + K V+ KE+KP+TY++ ++ + GL R D + T + L LH
Sbjct: 108 LTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHR 165
Query: 448 GKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWF 507
K E A +KH G L PP K E+ + V+ F + + D+ +GLGW
Sbjct: 166 SKLEGASAFYDKHLGTLLTPP-NSKEKEDFPRLVQHVFTIKDKT------DLVISGLGW- 217
Query: 508 SVRLKGEAALGVWTYEGVDIVLRNALL 534
+R+ G A + VW EGV +V R A++
Sbjct: 218 -IRVTGIAKVAVWAPEGVAVVTRKAII 243
>gi|418621384|ref|ZP_13184160.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU123]
gi|419769637|ref|ZP_14295731.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-250]
gi|374829328|gb|EHR93132.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU123]
gi|383358256|gb|EID35717.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-250]
Length = 288
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 161/327 (49%), Gaps = 41/327 (12%)
Query: 208 DFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVR 267
DF+GSF + ++V GN +++LV KIDLLP ++ R + W+R
Sbjct: 3 DFEGSFINAIQRIV----------------GN-KKIILVANKIDLLPKQINHRRVKEWLR 45
Query: 268 QRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIA 327
+ AR+ G+ + +SA K WG+ L+ + + K +V+ +G N GKSTL+N
Sbjct: 46 KSARKYGLEA-EDVVLISANKGWGIDELLQSINHVRNK-DDVYIVGTTNVGKSTLIN--- 100
Query: 328 KSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR 387
K ++ G EK++V T + PGTTL ++ + L ++ +FDTPG++ +Q+T
Sbjct: 101 KLIEQSVG----EKDVV---TTSRFPGTTLDMIDIP--LDEKSFMFDTPGIIQSHQMTNY 151
Query: 388 LTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHM 447
++ E K++ E+K R Y++ ++ GL R+D + + S L +H
Sbjct: 152 VSENELKIIIPKNEIKQRVYQLNEKQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHR 209
Query: 448 GKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWF 507
KTE A + + G L PP ++ ++ + + DI +GLG+
Sbjct: 210 TKTEKANDLWKSQLGALLSPP------QDAQQFNLNDVKAVRLETGKTKRDIMISGLGFI 263
Query: 508 SVRLKGEAALGVWTYEGVDIVLRNALL 534
++ A + V + VD++LRN++L
Sbjct: 264 TI--DAGAKVIVRVPKHVDVILRNSIL 288
>gi|383787213|ref|YP_005471782.1| ribosome biogenesis GTPase YqeH [Fervidobacterium pennivorans DSM
9078]
gi|383110060|gb|AFG35663.1| ribosome biogenesis GTPase YqeH [Fervidobacterium pennivorans DSM
9078]
Length = 370
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 202/462 (43%), Gaps = 106/462 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
CPGCG +Q +P PG+ P + ++ L++G
Sbjct: 4 CPGCGAEIQFDHPGKPGFI--PYE-----------------VYTKRLEEG---------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
K +VC RC L+HYG + E+ + +F +M A ++ +
Sbjct: 35 --------KEIVCQRCFKLKHYGMLVSEADEDEIMEF---------IMKAIKKFKHIVYI 77
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
D DF+G++ ++ +++S V+ V K D LP ++S ++ +
Sbjct: 78 FDVFDFEGTYRPEIVELLSGA-----------------NVLYVANKFDTLPKTVSGSQLK 120
Query: 264 HWVRQR--AREDGISKITKLHFVSAVKN-WGLKSLIDDVVDLAGKRGNVWAIGAQNAGKS 320
W++ R A+ I F+++ KN +G+ L ++ +L +G+ +G N GKS
Sbjct: 121 EWLKHRIPAKSSEI-------FITSTKNGFGISKLKKELENL---KGSALVLGVTNVGKS 170
Query: 321 TLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLH 380
+LL AI S T +P PGTT+G++ E L KLFD+PG++
Sbjct: 171 SLLKAITNS----------------SATISPYPGTTIGLI--EHRL-GSLKLFDSPGIVV 211
Query: 381 PNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGL--MRMDVEESSVESIYVTVW 438
+++ E Q + E+ +T++ +I + GL ++ +++S++ I+ ++
Sbjct: 212 NDRMIDLFDPECQSKILAKGEVTRKTFKPFPEETIFVGGLCQIKAKMKDSNLRPIF-QIF 270
Query: 439 ASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVD 498
A + H K +N KHFG+ L PP G+ VE++ F D +
Sbjct: 271 APENVTFHKTKNQNFLQNYPKHFGKLLFPPCGKMDVEKIS------FKEEKVVVDIDQ-E 323
Query: 499 IAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQV 540
++ +GL W +V+ +G + E V I +R AL+ + ++
Sbjct: 324 LSISGLCWINVK-RGPVEFTITVPENVRIYVREALMKPKRKI 364
>gi|346314270|ref|ZP_08855791.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
2_2_44A]
gi|345906628|gb|EGX76352.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
2_2_44A]
Length = 360
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 188/419 (44%), Gaps = 69/419 (16%)
Query: 126 FSNSLKKGGLVVFEAENETS--EVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFD 183
SN + KG VV ++ + + K E C RC +RHY D V ++ D D
Sbjct: 1 MSNKICKGCGVVLQSSDAAAIGYTPKMEADY-CQRCFRIRHY----DDVVISMKQGIDSD 55
Query: 184 HTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRV 243
L + ++V+ VVD DF+ + + + + GK +
Sbjct: 56 AV----LQKINAMDALVVWVVDLFDFESNLLPGINRHLL------------GKD-----I 94
Query: 244 VLVVTKIDLLPSSLSPTRFEHWVRQRAREDGI--SKITKLHFVSAVKNWGLKSLIDDVVD 301
++V TK DLLP++L + ++ +R +E+GI I ++A + +D+V
Sbjct: 95 LMVATKRDLLPATLGNEKLSQFLLRRLKEEGILVQGIVVCGDLAAHARREDNASVDEVCA 154
Query: 302 LAG---KRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLG 358
K +V +G NAGKSTLLNAI VD LT + PGTTL
Sbjct: 155 AIAHYRKERDVVVMGMANAGKSTLLNAICDGVD---------------LTTSRHPGTTLD 199
Query: 359 I--VRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIH 416
+ +EG +L+DTPGL + + T + K V K LK R Y++K ++
Sbjct: 200 FNSIAMEGY-----QLYDTPGLTRMDSLLTHVDDGLLKTVIPLKPLKARGYQLKGNQTLS 254
Query: 417 IAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEE 476
+ GL+R+D+ E + + S LPLH K E A + +H+ L P IGE+ E
Sbjct: 255 LGGLVRLDLIRC--EQVSCVAYFSERLPLHRSKQEKADVLWAQHYDEILSPVIGER--EH 310
Query: 477 LGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGE-AALGVWTYEGVDIVLRNALL 534
+ K+ S +D+ GLGWF +R G+ A++ V+ + ++ R A++
Sbjct: 311 MKKF-------SYGHVQEHKLDVVIHGLGWFCIR--GDVASVDVYVAQQGNVTFRKAMI 360
>gi|313901194|ref|ZP_07834682.1| ribosome biogenesis GTPase YqeH [Clostridium sp. HGF2]
gi|373121441|ref|ZP_09535309.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
21_3]
gi|422327456|ref|ZP_16408483.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
6_1_45]
gi|312954152|gb|EFR35832.1| ribosome biogenesis GTPase YqeH [Clostridium sp. HGF2]
gi|371663296|gb|EHO28486.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
6_1_45]
gi|371665459|gb|EHO30624.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
21_3]
Length = 360
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 188/419 (44%), Gaps = 69/419 (16%)
Query: 126 FSNSLKKGGLVVFEAENETS--EVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFD 183
SN + KG VV ++ + + K E C RC +RHY D V ++ D D
Sbjct: 1 MSNKICKGCGVVLQSSDAAAIGYTPKMEADY-CQRCFRIRHY----DDVVISMKQGIDSD 55
Query: 184 HTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRV 243
L + ++V+ VVD DF+ + + + + GK +
Sbjct: 56 AV----LQKINAMDALVVWVVDLFDFESNLLPGINRHLL------------GKD-----I 94
Query: 244 VLVVTKIDLLPSSLSPTRFEHWVRQRAREDGI--SKITKLHFVSAVKNWGLKSLIDDVVD 301
++V TK DLLP++L + ++ +R +E+GI I ++A + +D+V
Sbjct: 95 LMVATKRDLLPATLGNEKLSQFLLRRLKEEGILVQGIVVCGDLAAHARREDNASVDEVCA 154
Query: 302 LAG---KRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLG 358
K +V +G NAGKSTLLNAI VD LT + PGTTL
Sbjct: 155 AIAHYRKGRDVVVMGMANAGKSTLLNAICDGVD---------------LTTSRHPGTTLD 199
Query: 359 I--VRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIH 416
+ +EG +L+DTPGL + + T + K V K LK R Y++K ++
Sbjct: 200 FNSIAMEGY-----QLYDTPGLTRMDSLLTHVDDGLLKTVIPLKPLKARGYQLKGNQTLS 254
Query: 417 IAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEE 476
+ GL+R+D+ E + + S LPLH K E A + +H+ L P IGE+ E
Sbjct: 255 LGGLVRLDL--IGCEQVSCVAYFSERLPLHRSKQEKADVLWAQHYDEILTPVIGER--EH 310
Query: 477 LGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGE-AALGVWTYEGVDIVLRNALL 534
+ K+ S +D+ GLGWF +R G+ A++ V+ + ++ R A++
Sbjct: 311 MKKF-------SYGHVQEHKLDVVIHGLGWFCIR--GDVASVDVYVAQQGNVTFRKAMI 360
>gi|301015573|gb|ADK47527.1| NOA1/RIF1 protein [Medicago truncatula]
Length = 547
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 177/401 (44%), Gaps = 53/401 (13%)
Query: 142 NETSEVKK--HE-KPVVCARCHALRHYGKVKDVTVENLLP---DFDFDHTVGRKLMSASG 195
+ET E+KK H+ K V+C RC L H + V F + +KL
Sbjct: 112 SETYELKKKHHQLKTVLCGRCQLLSHGEMITAVGGHGGYSGGKQFITAEDLRQKLSHLRD 171
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS 255
A+++++ +VD DF+GSF +V D A N +++VVTK+DLLP
Sbjct: 172 AKALIVKLVDVVDFNGSFLSRV----RDLAGANP-------------IIMVVTKVDLLPR 214
Query: 256 SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQ 315
WV + ++ + +H S+ G+ +I ++ R +V+ +G+
Sbjct: 215 DTDFNCVGDWVVEAITRKKLN-VLSVHLTSSKSLVGITGVISEIQKEKKGR-DVYILGSA 272
Query: 316 NAGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKL 372
N GKS +NA+ K++ D K + ++ VPGTTLG +++ KL
Sbjct: 273 NVGKSAFINALLKTMSYNDPVAAAAQRYKPV-----QSAVPGTTLGPIQINAFF-GGGKL 326
Query: 373 FDTPGL-----------------LHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSI 415
+DTPG+ L P L+ ++++ N T G SI
Sbjct: 327 YDTPGVHLHHRQTAVVPSEDLSSLAPKSRLRGLSFPSSQVLSDNTNKGASTVNGLNGFSI 386
Query: 416 HIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVE 475
GL+R+DV ++ E+ +T + +P+HM TE A +K G L PP G ++ E
Sbjct: 387 FWGGLVRIDVLKALPETC-LTFYGPKRMPIHMVPTEKADEFYQKELGVLLTPPSGREKAE 445
Query: 476 EL-GKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEA 515
G +++ + + + DIA +GLGW SV G +
Sbjct: 446 HWRGLDSKRKLQIKFEDAERPACDIAISGLGWLSVEPVGRS 486
>gi|357450949|ref|XP_003595751.1| Nitric oxide synthase [Medicago truncatula]
gi|355484799|gb|AES66002.1| Nitric oxide synthase [Medicago truncatula]
Length = 547
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 176/401 (43%), Gaps = 53/401 (13%)
Query: 142 NETSEVKK--HE-KPVVCARCHALRHYGKVKDVTVENLLP---DFDFDHTVGRKLMSASG 195
+ET E+KK H+ K V+C RC L H + V F + +KL
Sbjct: 112 SETYELKKKHHQLKTVLCGRCQLLSHGEMITAVGGHGGYSGGKQFITAEDLRQKLSHLRD 171
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS 255
A+++++ +VD DF+GSF +V D A N +++VVTK+DLLP
Sbjct: 172 AKALIVKLVDVVDFNGSFLSRV----RDLAGANP-------------IIMVVTKVDLLPR 214
Query: 256 SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQ 315
WV + ++ + +H S+ G+ +I ++ R +V+ +G+
Sbjct: 215 DTDFNCVGDWVVEAITRKKLN-VLSVHLTSSKSLVGITGVISEIQKEKKGR-DVYILGSA 272
Query: 316 NAGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKL 372
N GKS +NA+ K++ D K + ++ VPGTTLG +++ KL
Sbjct: 273 NVGKSAFINALLKTMSYNDPVAAAAQRYKPV-----QSAVPGTTLGPIQINAFF-GGGKL 326
Query: 373 FDTPGL-----------------LHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSI 415
+DTPG+ L P L+ ++++ N T G SI
Sbjct: 327 YDTPGVHLHHRQTAVVPSEDLSSLAPKSRLRGLSFPSSQVLSDNTNKGASTVNGLNGFSI 386
Query: 416 HIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVE 475
GL+R+DV ++ E+ +T + +P+HM TE A +K G L PP G ++ E
Sbjct: 387 FWGGLVRIDVLKALPETC-LTFYGPKRMPIHMVPTEKADEFYQKELGVLLTPPSGREKAE 445
Query: 476 EL-GKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEA 515
G ++ + + + DIA +GLGW SV G +
Sbjct: 446 HWRGLDSERKLQIKFEDAERPACDIAISGLGWLSVEPVGRS 486
>gi|225466135|ref|XP_002268388.1| PREDICTED: nitric oxide synthase 1 [Vitis vinifera]
gi|296084222|emb|CBI24610.3| unnamed protein product [Vitis vinifera]
Length = 564
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 172/397 (43%), Gaps = 47/397 (11%)
Query: 143 ETSEVKKHEK---PVVCARCHALRHYGKVKDVTVENLLP---DFDFDHTVGRKLMSASGA 196
ET E+KK + V+C RC L H + V F + KL
Sbjct: 130 ETYELKKKHRQLRTVLCGRCRLLSHGQMITAVGGNGGYSGGKQFISAEELREKLSHLRHE 189
Query: 197 RSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSS 256
+++++ +VD DF+GSF V D A N ++LVVTK+DLLP
Sbjct: 190 KALIVKLVDIVDFNGSF----LAHVRDLAGANP-------------IILVVTKVDLLPKE 232
Query: 257 LSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQN 316
WV + + ++ + +H S+ G+ + ++ R NV+ +G+ N
Sbjct: 233 TDLNCVGDWVVEATMKKKLN-VLSVHLTSSKSLVGISGVASEIQKEKKGR-NVYILGSAN 290
Query: 317 AGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTP 376
GKS +NA+ K + A R + A VPGTTLG ++++ L KL+DTP
Sbjct: 291 VGKSAFINALLKMM-AQRDPAAAAAQRYKPIQSA-VPGTTLGPIQIDAFL-GGGKLYDTP 347
Query: 377 GL-LHPNQ-----------ITTRLTREEQKLVNINKELKPRTY-RIKA----GHSIHIAG 419
G+ LH Q + R Q N T RIK+ G SI G
Sbjct: 348 GVHLHHRQAAVVHSEDLPALAPRSRLRGQCFPNFQVAFDDSTLSRIKSNGLNGFSIFWGG 407
Query: 420 LMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEE-LG 478
L+R+D+ + + +T + L +HM T+ A +K G L PP G++R E+ LG
Sbjct: 408 LVRIDIVKV-LPQTRLTFYGPKALNIHMVPTDKADEFYQKELGVLLTPPTGKQRAEDWLG 466
Query: 479 KWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEA 515
++ + D + D+A +GLGW +V G +
Sbjct: 467 LETERQLQIKFEDSDRPACDLAISGLGWIAVEPIGRS 503
>gi|56808383|ref|ZP_00366137.1| COG1161: Predicted GTPases [Streptococcus pyogenes M49 591]
Length = 214
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 117/231 (50%), Gaps = 27/231 (11%)
Query: 308 NVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP 367
+V+ +G N GKSTL+NAI + + + +T + PGTTL ++E L
Sbjct: 7 DVYVVGVTNVGKSTLINAIIQEITGNK----------DVITTSRFPGTTLD--KIEIPLD 54
Query: 368 AQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEE 427
+FDTPG++H +Q+ L+ +E K+V+ KE+KP+TY++ ++ + GL R D
Sbjct: 55 DGTFIFDTPGIIHRHQMAHYLSPKELKIVSPKKEIKPKTYQLNPEQTLFLGGLSRFDFIN 114
Query: 428 SSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHV 487
+ T + L LH K A +KH G L PP +K + K VR EF +
Sbjct: 115 GERQGF--TAFFDNQLELHRTKLAGADAFYDKHVGTLLTPP-DKKELTAFPKLVRHEFTI 171
Query: 488 SGSSWDSSSVDIAAAGLGWFSVRLKGE----AALGVWTYEGVDIVLRNALL 534
+DI +GLGW +R+ G+ A + W EGV +++R A++
Sbjct: 172 ------DQKMDIVFSGLGW--IRVNGQKDSKAIVAAWAPEGVAVIVRKAII 214
>gi|310778332|ref|YP_003966665.1| ribosome biogenesis GTPase YqeH [Ilyobacter polytropus DSM 2926]
gi|309747655|gb|ADO82317.1| ribosome biogenesis GTPase YqeH [Ilyobacter polytropus DSM 2926]
Length = 370
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 183/411 (44%), Gaps = 64/411 (15%)
Query: 138 FEAENETSE--------VKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRK 189
E +NE+SE V + K + C RC +++YG+ V + D+ VG++
Sbjct: 12 IELQNESSEKQGFVPKSVLESRKEIYCQRCFKIKNYGEYLPVE----MTKEDYRKEVGKQ 67
Query: 190 LMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTK 249
A VVL V D DF+GSF ++ ++ + ++ + K
Sbjct: 68 AERAD----VVLAVFDIIDFEGSFDDEILDILREKDS-----------------IIAINK 106
Query: 250 IDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNV 309
+DL+P P+ WV++R ++GI+ + + +SA +G+ +I +
Sbjct: 107 LDLVPGEKHPSEVSDWVKERLADEGIAPLD-IAILSAKSGYGVNGIIRKLRHFFPDGAKA 165
Query: 310 WAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPA- 368
+G N GKS+++N + G++K +T + PGTTL +E ++
Sbjct: 166 MVLGTTNVGKSSIINGLL----------GDKK-----VTTSKYPGTTLK--SLENIISGT 208
Query: 369 QAKLFDTPGLLHPNQITTRLTRE-EQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEE 427
+ L DTPGL+ +++ + E K+V N E+ +T++++ + GL+ M V
Sbjct: 209 KLTLIDTPGLIPEGRVSDMVCEECNLKIVPAN-EISRKTFKLEKDRVLMFGGLLWMKVMN 267
Query: 428 SSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHV 487
S E + +AS + H ++ H G + PP + R E ++KE
Sbjct: 268 S--EKAIFSAFASKDVSFHETNEGRLEDLLRDHSGDAISPPCEKCRDEYAALPMKKE--- 322
Query: 488 SGSSWD-SSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYR 537
W S ++ GLGW SV+ +G + V EG +I+LR+A + R
Sbjct: 323 ---EWTVESGEELVFKGLGWISVK-RGPLTIEVTIPEGAEIILRDAFIKPR 369
>gi|429328803|gb|AFZ80563.1| hypothetical protein BEWA_034200 [Babesia equi]
Length = 569
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 143/295 (48%), Gaps = 18/295 (6%)
Query: 243 VVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDL 302
V+ V K+D++P PT + W+R R+ G +K + VS+ K GL L +
Sbjct: 274 VIWVANKVDVIPKPNDPTEIKRWLRSFVRQIGNAKSADVILVSSTKGIGLDVLEHRMKAY 333
Query: 303 --AGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIV 360
G N++ +GA N GKST +N + GG T + +PGTTL
Sbjct: 334 LQTGNPRNIYVVGATNVGKSTFVNRFLDFIQYNVGGT----------TRSAIPGTTLEF- 382
Query: 361 RVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKL-VNINKELKPRTYRIKAGHSIHIAG 419
+E LP KL DTPG+ P+Q+ + L R L ++I K + P + +++AG S+ + G
Sbjct: 383 -IEFGLPKGFKLVDTPGIPIPSQVPSLLYRPIDLLSISIMKTINPLSIKLEAGRSLLVGG 441
Query: 420 LMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGK 479
L R+D+ + S S V + S + + + ++ A +++ G L PP ++ E+L
Sbjct: 442 LARVDLVQGS--STIVQCFFSSGITIKVCRSVAAEDILKHQVGTSLYPPHDKEDFEKLLP 499
Query: 480 WVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+ F V+ + + +GLGW S G + ++ G++++ R A+L
Sbjct: 500 LSKYRFAVNCTGRRPVD-EFVISGLGWISFCGIGPKIIEMYIPRGINLLRRPAML 553
>gi|281203403|gb|EFA77603.1| hypothetical protein PPL_12209 [Polysphondylium pallidum PN500]
Length = 565
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 118/465 (25%), Positives = 183/465 (39%), Gaps = 115/465 (24%)
Query: 84 CPGCGVLMQDTNPKHPGYF---IRPSQNLNKVRKSHLVHVANESEFSNSL----KKGGLV 136
C GCG +Q +P GY + LNK +K ++ SE K L
Sbjct: 143 CTGCGCSLQCDHPNQLGYIPKSVAIRYLLNKNKKPSDTTTSDTSEDDYYDEEYEKYRKLT 202
Query: 137 VFEAENETSE--------VKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGR 188
+ E E K + C RCH L+HYGKV + + P +F H
Sbjct: 203 IEEEAKRNFENFSVKNGSKKNMNEKETCQRCHMLKHYGKVVPIKI----PVEEFRH---- 254
Query: 189 KLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVT 248
KL VV+ VVD DF G+F K++ GN P V+LV
Sbjct: 255 KLSPIKDMNCVVVKVVDIMDFHGTFVENFRKII----------------GNNP-VILVGN 297
Query: 249 KIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG- 307
K+D+LP+ + R E W+R+ + G+ ++ + +S+ G+ I ++ L +RG
Sbjct: 298 KMDVLPADIHRNRIEDWLRRECKLRGMV-VSHVTLLSSASRDGIAKFIVELEKL--RRGR 354
Query: 308 NVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEK---------------NIVSHLTEAPV 352
+V+ +G N GKST LNA+ + E+ + + T +
Sbjct: 355 DVFVVGCSNVGKSTFLNALVDEYREKVIFNENEQGNSGSSNNNNNQAKPSALERATTSIF 414
Query: 353 PGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAG 412
PGTTL I+ V P +K
Sbjct: 415 PGTTLNIISV----PLWSK----------------------------------------- 429
Query: 413 HSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEK 472
SI + GL R+D + TV+ S +LP+H+ KTE A + E+ G+ L PP+ E
Sbjct: 430 -SIFLGGLARIDYQGGLAT---FTVYVSNHLPVHICKTEKADALFERQRGKLLSPPLTED 485
Query: 473 R-----VEELGKWVRKEFHVSGSSWD--SSSVDIAAAGLGWFSVR 510
+ E + K F ++ D + DI +GLGW +++
Sbjct: 486 QDRFDNDESIKLTQVKRFTITPEKIDFKHTHSDIVISGLGWIAIK 530
>gi|125537706|gb|EAY84101.1| hypothetical protein OsI_05484 [Oryza sativa Indica Group]
Length = 547
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 193/450 (42%), Gaps = 78/450 (17%)
Query: 79 PKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVF 138
P C GCG +Q + PGY VH A + LKK
Sbjct: 95 PSAAACYGCGAPLQTADEAAPGY----------------VHPA-----TYDLKK------ 127
Query: 139 EAENETSEVKKHE-KPVVCARCHALRHYGKVKDVTVENLLP---DFDFDHTVGRKLMSAS 194
+ H+ + V+C RC L H + V P F + KL
Sbjct: 128 ---------RHHQLRTVLCGRCKLLSHGHMITAVGGHGGYPGGKQFVSADQLRDKLSYLR 178
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
+++++ +VD DF+GSF +V D A N ++LV+TK+DLLP
Sbjct: 179 HEKALIIKLVDIVDFNGSFLARV----RDFAGANP-------------IILVITKVDLLP 221
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
WV + + ++ + +H S+ G+ +I ++ R +V+ +G+
Sbjct: 222 RDTDLNCIGDWVVEAVVKKKLN-VLSVHLTSSKSLVGVTGVISEIQQEKKGR-DVYILGS 279
Query: 315 QNAGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAK 371
N GKS ++A+ +++ D + K I ++ VPGTTLG +++E L K
Sbjct: 280 ANVGKSAFISAMLRTMAYKDPVAAAAQKYKPI-----QSAVPGTTLGPIQIEAFL-GGGK 333
Query: 372 LFDTPGL-LHPNQITTRLTREEQKLVNINKELKPRTYRIK------AGHSIHIAGLMRMD 424
L+DTPG+ LH Q + ++ + L+ R + +G+S+ GL+R+D
Sbjct: 334 LYDTPGVHLHHRQAAV-IHADDLPSLAPQSRLRARCFPANDTDVGLSGNSLFWGGLVRID 392
Query: 425 VEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEE-LGKWVRK 483
V ++ + +T + L ++M T A E+ G L PP G+++ E +G V +
Sbjct: 393 VVKA-LPRTRLTFYGPKKLKINMVPTTEADEFYEREVGVTLTPPAGKEKAEGWVGLQVVR 451
Query: 484 EFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
E + D + DIA +GLGW +V G
Sbjct: 452 ELQIKYEESDRPACDIAISGLGWVAVEPLG 481
>gi|309775711|ref|ZP_07670709.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
3_1_53]
gi|308916550|gb|EFP62292.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
3_1_53]
Length = 359
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 193/460 (41%), Gaps = 112/460 (24%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCGV++Q+++ GY P E+++
Sbjct: 4 ICKGCGVVLQNSDANSIGY--TPKM---------------EADY---------------- 30
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
C RC +RHY D V ++ D D V RK+ + ++V+
Sbjct: 31 -------------CQRCFRIRHY----DDVVISMKQGIDSD-AVLRKI---NAMDALVVW 69
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
VVD DF+ + + + + GK +++V TK DLLP++L +
Sbjct: 70 VVDLFDFESNLLPGINRHLL------------GKD-----ILMVATKRDLLPATLGNDKL 112
Query: 263 EHWVRQRAREDGI--SKITKLHFVSAVKNWGLKSLIDDV---VDLAGKRGNVWAIGAQNA 317
++ +R +E+GI I ++A + +D+V + + +V +G NA
Sbjct: 113 SAFMLRRLKEEGIVVQGIVVCGDLAAHARREENASVDEVRSAIAHYRRERDVVVMGMANA 172
Query: 318 GKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGI--VRVEGVLPAQAKLFDT 375
GKSTLLNAI D LT + PGTTL + +EG +L+DT
Sbjct: 173 GKSTLLNAICDHTD---------------LTTSRHPGTTLDFNSIAMEGY-----QLYDT 212
Query: 376 PGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYV 435
PGL + + T + K V K LK R Y++K ++ + GL+R+D+ ES+
Sbjct: 213 PGLTRMDSLLTHVDERLLKTVIPLKPLKARGYQLKGNQTLSLGGLVRLDL--IGCESVSC 270
Query: 436 TVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSS 495
+ S L LH K E A + +H+ L P IGE++ ++ K+ S
Sbjct: 271 VAYFSERLKLHRSKQEKADDLWRQHYDEILSPVIGEQK--DMKKF-------SYGHVQEY 321
Query: 496 SVDIAAAGLGWFSVRLKGEAA-LGVWTYEGVDIVLRNALL 534
VD+ GLGWF + G L V+ E + R A++
Sbjct: 322 KVDVVIHGLGWFCI--SGHVQELHVYVAEQGSVTFRKAMI 359
>gi|290793111|gb|ADD63989.1| nitric oxide synthase-associated protein I [Solanum tuberosum]
Length = 561
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 180/396 (45%), Gaps = 53/396 (13%)
Query: 141 ENETSEVKK--HE-KPVVCARCHALRHYGKVKDVTVENLLP---DFDFDHTVGRKLMSAS 194
+ ET ++KK H+ + ++C RC L H + V F + KL
Sbjct: 125 DQETYDLKKKHHQLRKILCGRCRLLSHGHMITAVGGNGGYSGGKQFVTAEELREKLSHVR 184
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
+++++ +VD DF+GSF +V D A N ++LV+TK+DLLP
Sbjct: 185 HEKALIVKLVDIVDFNGSFLARV----RDLAGANP-------------IILVITKVDLLP 227
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
WV + + ++ + +H S+ G+ ++ ++ R +V+ +G+
Sbjct: 228 KDTDLNCVGDWVVEATMKKKLN-VLSVHLTSSKSLVGISGVVSEIQKEKKGR-DVYILGS 285
Query: 315 QNAGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAK 371
N GKS +NA+ ++ D + K I ++ VPGTTLG + ++ L + K
Sbjct: 286 ANVGKSAFINALLNTMPYKDPVAASARKYKPI-----QSAVPGTTLGPIPIDAFLGGE-K 339
Query: 372 LFDTPGL-LHPNQITTRLTREEQKLV---------------NINKELKPRTYRIK-AGHS 414
L+DTPG+ LH Q + L N++ ++ R +G S
Sbjct: 340 LYDTPGVHLHHRQAAVIHVEDLPTLAPQSRLRGQVFPSSGQNLDSQIANRMRSSGLSGLS 399
Query: 415 IHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRV 474
I GL+R+DV + E+ +T + L +H+ TE A +K G L PP G+++
Sbjct: 400 IFWGGLVRIDVLKVLPETC-LTFYGPKALQIHVVPTEEADEFYQKELGVLLTPPTGKEKA 458
Query: 475 EE-LGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
++ +G +++ + + + D+A +GLGWFSV
Sbjct: 459 DDWMGLETKRQLQIKYEDIERPTCDVAISGLGWFSV 494
>gi|356531613|ref|XP_003534371.1| PREDICTED: nitric oxide synthase 1-like [Glycine max]
Length = 554
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 186/431 (43%), Gaps = 69/431 (16%)
Query: 143 ETSEVKK--HE-KPVVCARCHALRHYGKVKDVTVENLLPD---FDFDHTVGRKLMSASGA 196
ET E+KK H+ + V+C RC L H + V P F + KL
Sbjct: 119 ETYELKKKHHQLRTVLCRRCRLLSHGKMITAVGGHGGYPGGKLFVSAEELREKLSHLRHE 178
Query: 197 RSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSS 256
+++++ +VD DF+GSF +V + +G+ P +VLVVTK+DLLP
Sbjct: 179 KALIVKLVDIVDFNGSFLSRVRDL----------------AGSNP-IVLVVTKVDLLPRD 221
Query: 257 LSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQN 316
WV + ++ + +H S+ G+ +I ++ R +V+ +G+ N
Sbjct: 222 TDLNCVGDWVVEATMRKKLN-VLSVHLTSSKSLVGITGVISEIQKEKKGR-DVYILGSAN 279
Query: 317 AGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLF 373
GKS +NA+ K++ D K I ++ VPGTTLG +++ L KL+
Sbjct: 280 VGKSAFINALLKTMAINDPVAASAQRYKPI-----QSAVPGTTLGPIQINAFL-GGGKLY 333
Query: 374 DTPGLLHPNQITTRLTREEQKLVNINKELKPRTY--------RIKAG----------HSI 415
DTPG+ ++ T + E+ ++ L+ + ++ G SI
Sbjct: 334 DTPGVHLFHRQTAVVHSEDLPILAPQSRLRGLAFPSSIVSSDNVEEGASTIVNGLNEFSI 393
Query: 416 HIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVE 475
GL+R+DV + E+ +T + +P+HM TE A + G L PP G + E
Sbjct: 394 FWGGLVRIDVLKVLPETC-LTFYGPKRIPIHMVPTEQAVEFYQTELGFLLTPPSGGENAE 452
Query: 476 EL-GKWVRKEFHVSGSSWDSSSVDIAAAGLGWFS---------------VRLKGEAALGV 519
G ++ + D + DIA +GLGWF+ V GE L V
Sbjct: 453 NWKGLESERKLQIKFEVVDRPACDIAISGLGWFTVEPVSRSHKISQPKPVETAGELILAV 512
Query: 520 WTYEGVDIVLR 530
+ V+I +R
Sbjct: 513 HVPKAVEIFVR 523
>gi|221059269|ref|XP_002260280.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193810353|emb|CAQ41547.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 824
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 156/329 (47%), Gaps = 10/329 (3%)
Query: 243 VVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDV--- 299
++ +V K+D LP S + + W R R+ + I L F+SA+K + L L + +
Sbjct: 423 IIWLVNKVDCLPKSTNLEMVKIWFRNLVRQIKNTHINDLIFISALKFYNLNMLEERMKYY 482
Query: 300 VDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGI 359
VDL K +++ +G N GKS+ +N+ K ++ GD K +T + +P TTL
Sbjct: 483 VDLE-KGTDIYIVGCVNVGKSSFVNSFLKYINYKHIGDIYSKRKKGGVTTSNIPYTTLNY 541
Query: 360 VRVEGVLPAQAKLFDTPGLLHPNQITTRLTRE-EQKLVNINKELKPRTYRIKAGHSIHIA 418
+ L K+ DT G+ Q ++ L ++ + ++INK ++P TY++K SI +
Sbjct: 542 NTFQ--LKKNIKIIDTMGIPTKYQYSSILYKDIDLNSISINKRIQPFTYKLKENSSIILG 599
Query: 419 GLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELG 478
L +++ S VT + S + +H+ ++E +EK L PP E+ L
Sbjct: 600 SLCYINLIYGSFA--LVTFYISNRVTIHICRSEKVEQFLEKKKCSFLYPPHVEQDFHLLK 657
Query: 479 KWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRS 538
+V+ V G ++S DI + L WFSV +G ++ + V I R +++
Sbjct: 658 PFVKHTVKVFGKDFESID-DIVISDLCWFSVSGRGVKVFEIYAPKNVKIYRRPSMITDAV 716
Query: 539 QVFEVAGFTVSKIISKADQSLNKSKRLNE 567
+ +V F + + L K K+L E
Sbjct: 717 KHTQVDVFKYKSYRGRTAKVLRKKKKLIE 745
>gi|242060118|ref|XP_002451348.1| hypothetical protein SORBIDRAFT_04g000530 [Sorghum bicolor]
gi|241931179|gb|EES04324.1| hypothetical protein SORBIDRAFT_04g000530 [Sorghum bicolor]
Length = 546
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 187/450 (41%), Gaps = 82/450 (18%)
Query: 81 LTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEA 140
L C GCG +Q PGY
Sbjct: 97 LASCYGCGAPLQTAEEAAPGY--------------------------------------V 118
Query: 141 ENETSEVKKHE---KPVVCARCHALRHYGKVKDVTVENLLP---DFDFDHTVGRKLMSAS 194
+ +T E+KK + V+C RC L H V V P F + KL
Sbjct: 119 DPDTYELKKRHHQLRTVLCGRCKLLSHGHMVTAVGGHGGYPGGKQFVSAEQLREKLSYLR 178
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
+++++ +VD DF+GSF +V D A N ++LV+TK+DLLP
Sbjct: 179 HEKALIVKLVDIVDFNGSFLARV----RDFAGANP-------------IILVITKVDLLP 221
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
WV + + ++ + +H S+ G+ +I ++ R +V+ +G+
Sbjct: 222 RDTDLNCIGDWVVESVVKKKLN-VLSVHLTSSKSLVGITGVISEIQQEKKGR-DVYILGS 279
Query: 315 QNAGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAK 371
N GKS ++A+ +++ D + K I ++ VPGTTLG +++E L K
Sbjct: 280 ANVGKSAFISAMLRTMAYKDPVAAAAQKYKPI-----QSAVPGTTLGPIQIEAFL-GGGK 333
Query: 372 LFDTPGL-LHPNQITTRLTREEQKLVNINKELKPRTYRIK------AGHSIHIAGLMRMD 424
L+DTPG+ LH Q + ++ + LK R + +G+S+ AGL+R+D
Sbjct: 334 LYDTPGVHLHHRQAAV-IHADDLPSLAPQSRLKGRCFPANDTDVELSGNSLFWAGLVRID 392
Query: 425 VEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEEL-GKWVRK 483
V ++ + +T + L ++M T A E G L PP G++R E G +
Sbjct: 393 VVKA-LPRARLTFYGPKKLKINMVPTTEADQFYETEVGVTLTPPTGKERAEGWQGLQGVR 451
Query: 484 EFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
E + D + DIA +GLGW SV G
Sbjct: 452 ELKIKYEERDRPACDIAISGLGWISVEPSG 481
>gi|373451898|ref|ZP_09543816.1| ribosome biogenesis GTPase YqeH [Eubacterium sp. 3_1_31]
gi|371967330|gb|EHO84801.1| ribosome biogenesis GTPase YqeH [Eubacterium sp. 3_1_31]
Length = 359
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 189/413 (45%), Gaps = 69/413 (16%)
Query: 132 KGGLVVFEAENETSEVKKHEKPVV--CARCHALRHYGKVKDVTVENLLPDFDFDHTVGRK 189
KG VV ++E++T ++ KP C RC +RHY D V ++ + D + R
Sbjct: 6 KGCGVVMQSEDKT-KLGYTPKPEADYCQRCFRIRHY----DDVVISMKQGINSDEVLARI 60
Query: 190 LMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTK 249
M ++V+ VVD DF+ A MVS N + +++V TK
Sbjct: 61 AM----MDALVVWVVDLFDFE-------ANMVSGL---NRHLLHKD-------ILMVATK 99
Query: 250 IDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKN--WGLKSLIDDV---VDLAG 304
DLLP+++S + ++ QR +E I + +K+ + ID++ ++
Sbjct: 100 RDLLPATMSDQKLGDFLLQRLKELSIQVKGIVICGDLMKHPRRDENNSIDEIAYAIEHYR 159
Query: 305 KRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGI--VRV 362
+V +G NAGKST+LNA+ + D LT + PGTTL + +
Sbjct: 160 NERDVVVMGMANAGKSTMLNALCEKGD---------------LTTSRHPGTTLDFNEINM 204
Query: 363 EGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMR 422
+G L+DTPGL + + T + + K + K LKPR Y++ +I +AG +R
Sbjct: 205 DGY-----TLYDTPGLTRMDSLLTHVDDKLLKTMIPLKPLKPRGYQLYQDQTISLAGFVR 259
Query: 423 MDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVR 482
+D+ + + +P LPLH K E A + ++H G L P I E ++E+ +
Sbjct: 260 LDLLGG--HKVSCVAYFAPDLPLHRSKQEKADQLWQQHLGELLAPAIDES-IKEMQMF-- 314
Query: 483 KEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEA-ALGVWTYEGVDIVLRNALL 534
E H G VD+ GLGWF V G+ + V+ + ++ R A++
Sbjct: 315 -EMHPKG-----EKVDVVIHGLGWFCV--SGDVKTIRVYVSKYANVTFRKAMI 359
>gi|293400788|ref|ZP_06644933.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291305814|gb|EFE47058.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 360
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 189/413 (45%), Gaps = 69/413 (16%)
Query: 132 KGGLVVFEAENETSEVKKHEKPVV--CARCHALRHYGKVKDVTVENLLPDFDFDHTVGRK 189
KG VV ++E++T ++ KP C RC +RHY D V ++ + D + R
Sbjct: 7 KGCGVVMQSEDKT-KLGYTPKPEADYCQRCFRIRHY----DDVVISMKQGINSDEVLARI 61
Query: 190 LMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTK 249
M ++V+ VVD DF+ A MVS N + +++V TK
Sbjct: 62 AM----MDALVVWVVDLFDFE-------ANMVSGL---NRHLLHKD-------ILMVATK 100
Query: 250 IDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKN--WGLKSLIDDV---VDLAG 304
DLLP+++S + ++ QR +E I + +K+ + ID++ ++
Sbjct: 101 RDLLPATMSDQKLGDFLLQRLKELSIQVKGIVICGDLMKHPRRDENNSIDEIAYAIEHYR 160
Query: 305 KRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGI--VRV 362
+V +G NAGKST+LNA+ + D LT + PGTTL + +
Sbjct: 161 NERDVVVMGMANAGKSTMLNALCEKGD---------------LTTSRHPGTTLDFNEINM 205
Query: 363 EGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMR 422
+G L+DTPGL + + T + + K + K LKPR Y++ +I +AG +R
Sbjct: 206 DGY-----TLYDTPGLTRMDSLLTHVDDKLLKTMIPLKPLKPRGYQLYQDQTISLAGFVR 260
Query: 423 MDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVR 482
+D+ + + +P LPLH K E A + ++H G L P I E ++E+ +
Sbjct: 261 LDLLGG--HKVSCVAYFAPDLPLHRSKQEKADQLWQQHLGELLAPAIDES-IKEMQMF-- 315
Query: 483 KEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEA-ALGVWTYEGVDIVLRNALL 534
E H G VD+ GLGWF V G+ + V+ + ++ R A++
Sbjct: 316 -EMHPKG-----EKVDVVIHGLGWFCV--SGDVKTIRVYVSKYANVTFRKAMI 360
>gi|302140656|gb|ADK95138.1| nitric oxide-associated protein 1 [Nicotiana attenuata]
Length = 548
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 177/396 (44%), Gaps = 53/396 (13%)
Query: 141 ENETSEVKK--HE-KPVVCARCHALRHYGKVKDVTVENLLP---DFDFDHTVGRKLMSAS 194
+ ET ++KK H+ + V+C RC L H + V F + KL
Sbjct: 119 DQETYDLKKKHHQLRKVLCGRCRLLSHGHMITAVGGNGGYSGGKQFVTAEELREKLSHLR 178
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
+++++ +VD DF+GSF +V D A N ++LV+TK+DLLP
Sbjct: 179 NEKALIVKLVDIVDFNGSFLARV----RDLAGANP-------------IILVITKVDLLP 221
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
WV + + ++ + +H S+ G+ ++ ++ R +V+ +G+
Sbjct: 222 KETDLNCVGDWVVEATMKKKLN-VLSVHLTSSKSLVGIAGVVSEIQKEKKGR-DVYILGS 279
Query: 315 QNAGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAK 371
N GKS +NA+ ++ D + K I ++ VPGTTLG + + L K
Sbjct: 280 ANVGKSAFINALLNTMSYNDPIAATARKYKPI-----QSAVPGTTLGPIPXDAFL-GGGK 333
Query: 372 LFDTPGL-LHPNQITTRLTREEQKL---------------VNINKELKPRTYRIK-AGHS 414
++DTPG+ LH Q + L +N+ ++ R +G S
Sbjct: 334 VYDTPGVHLHHRQAAVIHAEDLPTLAPQSRLRGQAFPSSGLNLESQIADRVRSSGLSGLS 393
Query: 415 IHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRV 474
I GL+R+DV + E+ +T + L LHM TE A +K G L PP G+++
Sbjct: 394 IFWGGLVRIDVLKVLPETC-LTFYGPKALQLHMVPTEEADEFYQKELGILLTPPTGKEKA 452
Query: 475 EE-LGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
+ +G +++ + + + D+A +GLGWFSV
Sbjct: 453 DGWMGLETKRQLQIKYEDIERPTCDVAISGLGWFSV 488
>gi|297819358|ref|XP_002877562.1| ATNOS1/NOS1 [Arabidopsis lyrata subsp. lyrata]
gi|297323400|gb|EFH53821.1| ATNOS1/NOS1 [Arabidopsis lyrata subsp. lyrata]
Length = 560
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 190/454 (41%), Gaps = 89/454 (19%)
Query: 81 LTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEA 140
++ C GCG +Q ++ PG+ LV +E
Sbjct: 104 ISCCYGCGAPLQTSDVDSPGF-------------------------------ADLVTYEL 132
Query: 141 ENETSEVKKHE--KPVVCARCHALRHYGKVKDVTVENLLP---DFDFDHTVGRKLMSASG 195
+ KKH + ++C RC L H + V F + KL
Sbjct: 133 K------KKHHQLRTMICGRCQLLSHGHMITAVGGNGGYSGGKQFVSADELREKLSHLRH 186
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS 255
+++++ +VD DF GSF +V +V G P ++LV+TKIDLLP
Sbjct: 187 EKALIVKLVDIVDFHGSFLARVRDLV----------------GANP-IILVITKIDLLPK 229
Query: 256 SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQ 315
WV + ++ + +H S+ G+ + ++ R +V+ +GA
Sbjct: 230 GTDMNCIGDWVVEVTMRKKLN-VLSVHLTSSKSLDGVSGVASEIQKEKKGR-DVYILGAA 287
Query: 316 NAGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKL 372
N GKS +NA+ K++ D + K I ++ VPGTTLG +++ L + KL
Sbjct: 288 NVGKSAFINALLKTMAERDPVAAAAQKYKPI-----QSAVPGTTLGPIQINAFLGGE-KL 341
Query: 373 FDTPGL-LHPNQITTRLTREEQKLVNINKELKPRTYRIKA---------------GHSIH 416
+DTPG+ LH Q + + L N+ L+ +++ I G++
Sbjct: 342 YDTPGVHLHHRQAAVVHSDDLPALAPQNR-LRGQSFDISTLPTQSPSSPKGESLNGYTFF 400
Query: 417 IAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEE 476
GL+R+D+ ++ E+ + T + L +H+ T+ A EK G L PP G+ +++E
Sbjct: 401 WGGLVRIDILKALPETCF-TFYGPKALDIHVVPTKTATAFYEKELGVLLTPPSGKDQMQE 459
Query: 477 L-GKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
G + + + + D+A +GLGW S+
Sbjct: 460 WKGLQSHRLLQIEINDAKRPASDVAISGLGWISI 493
>gi|428170399|gb|EKX39324.1| hypothetical protein GUITHDRAFT_114525 [Guillardia theta CCMP2712]
Length = 574
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 106/199 (53%), Gaps = 4/199 (2%)
Query: 341 KNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINK 400
+ + +T + +PGTTL + ++ L +FDTPGL+ P+Q+T LT EE +
Sbjct: 339 RGMQGGVTTSSLPGTTLDLTELD--LGNGYSMFDTPGLIVPSQLTNMLTMEELAVALPQH 396
Query: 401 ELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKH 460
+++ TYRI AG +H+ +R +E + + + T++ S + +H+GKT A
Sbjct: 397 KVEHVTYRIPAGTCVHLGAFVR--IELLTDKPFFFTIFVSNLVTIHVGKTSKAEEFRWAQ 454
Query: 461 FGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVW 520
GR L+PP+ +R++ +G+ G SWD + DI AG GW ++ G + V
Sbjct: 455 VGRMLKPPMTSERLKAVGELEETILDDYGDSWDVACTDIVIAGFGWVALTGIGPVRVRVL 514
Query: 521 TYEGVDIVLRNALLPYRSQ 539
+GV + R+ L+P+ ++
Sbjct: 515 APKGVGVTRRSPLMPFEAR 533
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 95/246 (38%), Gaps = 82/246 (33%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
CPGCG +Q ++ PGY
Sbjct: 55 CPGCGCKLQSSSSSAPGY------------------------------------------ 72
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVK-DVTVENLLPDFDFDHTVGRKLMSASGARS-VVL 201
E K ++ VVC RC+ L+HYGKV D+T +N + R +++ +S +V
Sbjct: 73 VPESKTGQEKVVCVRCYNLQHYGKVNPDLTAQNA-KYTEVSPAAFRSILAPLKKQSCIVC 131
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
VVD DF G+F +P + +V + R
Sbjct: 132 YVVDIFDFHGTF--------------------------LPDLKEIVGR----------DR 155
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG-NVWAIGAQNAGKS 320
+ WVR+ A+ G I + +SA +G+K L + + KR N++ +GA N GKS
Sbjct: 156 VKQWVREEAKILGDYLIVDVVLISAASGYGVKLLEQQLRAWSSKRKQNIYIVGAANVGKS 215
Query: 321 TLLNAI 326
TL+N +
Sbjct: 216 TLVNRL 221
>gi|293331105|ref|NP_001168044.1| uncharacterized protein LOC100381773 [Zea mays]
gi|223945667|gb|ACN26917.1| unknown [Zea mays]
Length = 540
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 185/447 (41%), Gaps = 76/447 (17%)
Query: 81 LTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEA 140
L C GCG +Q PGY + P K R L
Sbjct: 95 LASCYGCGAPLQTAEEAAPGY-VDPDTYQLKKRHHQL----------------------- 130
Query: 141 ENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLP---DFDFDHTVGRKLMSASGAR 197
+ V+C RC L H V V P F + KL +
Sbjct: 131 -----------RTVLCGRCKLLSHGHMVTAVGGHGGYPGGKKFVSAEQLREKLSYLRHEK 179
Query: 198 SVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSL 257
++++ +VD DF+GSF +V D A N ++LV+TK+DLLP
Sbjct: 180 ALIVKLVDIVDFNGSFLARV----RDFAGANP-------------IILVITKVDLLPRDT 222
Query: 258 SPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNA 317
WV + + ++ + +H S+ G+ +I ++ R +V+ +G+ N
Sbjct: 223 DLNCIGDWVVESVVKKKLN-VLSVHLTSSKSLVGITGVISEIHQERKGR-DVYILGSANV 280
Query: 318 GKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFD 374
GKS ++A+ +++ D + K I ++ VPGTTLG +++E L KL+D
Sbjct: 281 GKSAFISAMLRTMAYKDPVAAAAQKYKPI-----QSAVPGTTLGPIQIEAFL-GGGKLYD 334
Query: 375 TPGL-LHPNQITTRLTREEQKLVNINKELKPRTYRIK------AGHSIHIAGLMRMDVEE 427
TPG+ LH Q + ++ + LK R + +G+S+ AGL+R+DV +
Sbjct: 335 TPGVHLHHRQAAV-IHADDLPSLAPQSRLKGRCFPANDTDVELSGNSLFWAGLVRIDVIK 393
Query: 428 SSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEE-LGKWVRKEFH 486
+ S +T + L ++M T A E G L PP G++R E G +E
Sbjct: 394 ALPRS-RLTFYGPKKLKINMVPTTEADQFYETEVGVTLTPPTGKERAEGWTGLQGVRELK 452
Query: 487 VSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ D + DIA +GLGW SV G
Sbjct: 453 IKYEERDRPACDIAISGLGWISVEPSG 479
>gi|449488606|ref|XP_004158109.1| PREDICTED: NO-associated protein 1,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 555
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 179/394 (45%), Gaps = 48/394 (12%)
Query: 141 ENETSEVKK--HE-KPVVCARCHALRHYGKVKDVTVENLLP---DFDFDHTVGRKLMSAS 194
E ET E+KK H+ + V+C RC L H + V F + KL
Sbjct: 125 EPETYELKKKHHQLRRVICGRCRLLSHGHMITAVGGNGGYSGGKQFISAEELRDKLSHLR 184
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
+++++ +VD DF+GSF +V + +G P ++LVVTK+DLLP
Sbjct: 185 YEKALIVKLVDIVDFNGSFLARVRDL----------------AGANP-IILVVTKVDLLP 227
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
WV + + +S + +H S+ G+ ++ D+ R +V+ +G+
Sbjct: 228 KGTDLNCIGDWVVEATTKKKLS-VLSVHLTSSKSLVGVAGVVADIQKEKKGR-DVYILGS 285
Query: 315 QNAGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAK 371
N GKS +NA+ K + D + + I ++ VPGTTLG ++++ L K
Sbjct: 286 ANVGKSAFINAVLKKMAERDPVAAAAQKYRPI-----QSAVPGTTLGPIQIDAFL-GGGK 339
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIK------------AGHSIHIAG 419
L+DTPG+ +++ + E+ + L+ + ++++ G SI G
Sbjct: 340 LYDTPGVHLHHRLAAVVHSEDLPALAPQSRLRGQHFQVQHLPMNNELSSGLNGFSIFWGG 399
Query: 420 LMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEK-RVEELG 478
L+R+D+ + E+ +T + L + + TE A EK G L PP G++ R + G
Sbjct: 400 LVRVDLLKVQPETC-LTFYGPKGLQIRVVPTEKADEFYEKELGISLTPPSGKQTRNDWRG 458
Query: 479 KWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
++ ++ + D+A +GLGW +V K
Sbjct: 459 LETVRQLKINFEDEQRPACDVAISGLGWITVEQK 492
>gi|156083447|ref|XP_001609207.1| hypothetical protein [Babesia bovis T2Bo]
gi|154796458|gb|EDO05639.1| conserved hypothetical protein [Babesia bovis]
Length = 579
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 119/514 (23%), Positives = 207/514 (40%), Gaps = 110/514 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYF---------IRPSQNLNKVRKSHLVHVANESEFSNSLKKGG 134
C GCG L Q T+ PGY R S + K+ + HV + G
Sbjct: 96 CIGCGALFQSTDSTKPGYIDSEVLSGIGARGSAKVPKIGGVEVDHVPD-----------G 144
Query: 135 LVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDH---------- 184
+ V + ++ +++ ++ VC RC+ L+ Y +++ + N D + DH
Sbjct: 145 IQVDKCDD--GRLQRLKRKAVCRRCYKLQFYKRLEPIMEPN---DTESDHNPRESTSRII 199
Query: 185 ----------------------TVGRK---------LMSASGARSVVLMVVDAADFDGS- 212
T RK LM+ + +V VVD + + +
Sbjct: 200 HETMKHTGTMKMPEEIERERTATSARKAAAPEVISNLMTRIKSDGLVFFVVDITNVEATA 259
Query: 213 FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 272
P + + + E V+ V+ K+D+LP + W+R R
Sbjct: 260 LPELYIALRNKSIE----------------VIWVINKVDVLPYRTDLPEIKRWLRSIVRH 303
Query: 273 DGISKITKLHFVSAVKNWGLKSL---IDDVVDLAGKRGNVWAIGAQNAGKSTLLNAI--- 326
G +K + + VS+ K G SL + + + + R + + +GA N GKST +N +
Sbjct: 304 IGNAKNSDVFMVSSTKGIGFDSLEKRLKESIKIGQAR-DTYVVGAVNTGKSTFVNRLLHY 362
Query: 327 -----AKSVDAGRGGDGEEKNI---VSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGL 378
S + D NI V +T + PG+TLG V L L DTPG+
Sbjct: 363 IHYRYVASTLMTKCSDAGTLNIKRGVGGVTRSATPGSTLGFVDFG--LFGGFNLVDTPGI 420
Query: 379 LHPNQITTRLTREEQKL-VNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTV 437
+ +T LT + +NK + P R++ G S+ + L+R+D E V ++
Sbjct: 421 PVASTVTQLLTTPADMFSIAMNKRIDPTVIRMEPGQSLLLGALIRIDFVEGHVAIVH--C 478
Query: 438 WASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKW--VRKEFHVSGS-SWDS 494
+ S + + +T A +++ G ++ PP ++ E+L W R E + + + D
Sbjct: 479 YISSGVTMETCRTVAASDIMKYKAGVKIYPPHSKQNYEKLLPWSTYRVELNCNAAFPLD- 537
Query: 495 SSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIV 528
DI GLGW S+ G + + +G+DI+
Sbjct: 538 ---DIVLPGLGWLSITGTGPKIIEISAPKGLDIL 568
>gi|417905371|ref|ZP_12549182.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21269]
gi|341843647|gb|EGS84869.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21269]
Length = 261
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 147/286 (51%), Gaps = 26/286 (9%)
Query: 250 IDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNV 309
+DLLP ++ R + W+++ AR+ G+ + +SA K WG+ L+ + ++ + +V
Sbjct: 1 MDLLPKQINKRRVKEWLKRTARKYGLED-DDVVLISAEKGWGIDDLLSSIANIR-ENEDV 58
Query: 310 WAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQ 369
+ +G N GKSTL+N K ++A G EK++V T + PGTTL ++ + L
Sbjct: 59 YIVGTTNVGKSTLIN---KLIEASVG----EKDVV---TTSRFPGTTLDMIDIP--LDET 106
Query: 370 AKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESS 429
+ ++DTPG++ +Q+T ++ +E K++ KE+K R Y++ ++ GL R+D
Sbjct: 107 SFMYDTPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGG 166
Query: 430 VESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVE-ELGKWVRKEFHVS 488
+ + S L +H KTE A + G L PP + + K VR E +
Sbjct: 167 KRPL--VCFFSNDLNIHRTKTEKANDLWRNQLGDLLTPPGNPQNFDFNEVKAVRLE---T 221
Query: 489 GSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
G D+ +GLG+ ++ A + V + VD+VLRN++L
Sbjct: 222 G----KEKRDVMISGLGFITI--GPGAKVIVRVPKNVDVVLRNSIL 261
>gi|115443669|ref|NP_001045614.1| Os02g0104700 [Oryza sativa Japonica Group]
gi|75131025|sp|Q6YPG5.1|NOS_ORYSJ RecName: Full=Putative nitric oxide synthase
gi|40363768|dbj|BAD06278.1| putative GTPase [Oryza sativa Japonica Group]
gi|41052546|dbj|BAD07538.1| putative GTPase [Oryza sativa Japonica Group]
gi|113535145|dbj|BAF07528.1| Os02g0104700 [Oryza sativa Japonica Group]
Length = 547
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 192/450 (42%), Gaps = 78/450 (17%)
Query: 79 PKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVF 138
P C GCG +Q + PGY VH A + LKK
Sbjct: 95 PSAAACYGCGAPLQTADEAAPGY----------------VHPA-----TYDLKK------ 127
Query: 139 EAENETSEVKKHE-KPVVCARCHALRHYGKVKDVTVENLLP---DFDFDHTVGRKLMSAS 194
+ H+ + V+C RC L H + V P F + KL
Sbjct: 128 ---------RHHQLRTVLCGRCKLLSHGHMITAVGGHGGYPGGKQFVSADQLRDKLSYLR 178
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
+++++ +VD DF+GSF +V D A N ++LV+TK+DLLP
Sbjct: 179 HEKALIIKLVDIVDFNGSFLARV----RDFAGANP-------------IILVITKVDLLP 221
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
WV + + ++ + +H S+ G+ +I ++ R +V+ +G+
Sbjct: 222 RDTDLNCIGDWVVEAVVKKKLN-VLSVHLTSSKSLVGVTGVISEIQQEKKGR-DVYILGS 279
Query: 315 QNAGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAK 371
N GKS ++A+ +++ D + K I ++ VPGTTLG +++E L K
Sbjct: 280 ANVGKSAFISAMLRTMAYKDPVAAAAQKYKPI-----QSAVPGTTLGPIQIEAFL-GGGK 333
Query: 372 LFDTPGL-LHPNQITTRLTREEQKLVNINKELKPRTYRIK------AGHSIHIAGLMRMD 424
L+DTPG+ LH Q + ++ + L+ R + +G+S+ GL+R+D
Sbjct: 334 LYDTPGVHLHHRQAAV-IHADDLPSLAPQSRLRARCFPANDTDVGLSGNSLFWGGLVRID 392
Query: 425 VEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEE-LGKWVRK 483
V + ++ +T + L ++M T A E+ G L PP G+++ E +G +
Sbjct: 393 VVK-ALPRTRLTFYGPKKLKINMVPTTEADEFYEREVGVTLTPPAGKEKAEGWVGLQGVR 451
Query: 484 EFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
E + D + DIA +GLGW +V G
Sbjct: 452 ELQIKYEESDRPACDIAISGLGWVAVEPLG 481
>gi|449451815|ref|XP_004143656.1| PREDICTED: NO-associated protein 1,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 555
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 178/394 (45%), Gaps = 48/394 (12%)
Query: 141 ENETSEVKK--HE-KPVVCARCHALRHYGKVKDVTVENLLP---DFDFDHTVGRKLMSAS 194
E ET E+KK H+ + V+C RC L H + V F + KL
Sbjct: 125 EPETYELKKKHHQLRRVICGRCRLLSHGHMITAVGGNGGYSGGKQFISAEELRDKLSHLR 184
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
+++++ +VD DF+GSF +V + +G P ++LVVTK+DLLP
Sbjct: 185 YEKALIVKLVDIVDFNGSFLARVRDL----------------AGANP-IILVVTKVDLLP 227
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
WV + +S + +H S+ G+ ++ D+ R +V+ +G+
Sbjct: 228 KGTDLNCIGDWVVEATTRKKLS-VLSVHLTSSKSLVGVAGVVADIQKEKKGR-DVYILGS 285
Query: 315 QNAGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAK 371
N GKS +NA+ K + D + + I ++ VPGTTLG ++++ L K
Sbjct: 286 ANVGKSAFINAVLKKMAERDPVAAAAQKYRPI-----QSAVPGTTLGPIQIDAFL-GGGK 339
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIK------------AGHSIHIAG 419
L+DTPG+ +++ + E+ + L+ + ++++ G SI G
Sbjct: 340 LYDTPGVHLHHRLAAVVHSEDLPALAPQSRLRGQHFQVQHLPMDNELSSGLNGFSIFWGG 399
Query: 420 LMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEK-RVEELG 478
L+R+D+ + E+ +T + L + + TE A EK G L PP G++ R + G
Sbjct: 400 LVRVDLLKVQPETC-LTFYGPKGLQIRVVPTEKADEFYEKELGISLTPPSGKQTRNDWRG 458
Query: 479 KWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
++ ++ + D+A +GLGW +V K
Sbjct: 459 LETVRQLKINFEDEQRPACDVAISGLGWITVEQK 492
>gi|356543000|ref|XP_003539951.1| PREDICTED: nitric oxide synthase 1-like [Glycine max]
Length = 557
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 124/506 (24%), Positives = 208/506 (41%), Gaps = 109/506 (21%)
Query: 73 NYDEATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKK 132
N +A+ + C GCG + ++ PGY
Sbjct: 88 NAIKASRAVASCYGCGAPLHTSDADAPGY------------------------------- 116
Query: 133 GGLVVFEAENETSEVKK--HE-KPVVCARCHALRHYGKVKDVTVENLLPD---FDFDHTV 186
+ ET E+KK H+ + V+C RC L H + V P F +
Sbjct: 117 -------VDPETYELKKKHHQLRTVLCRRCRLLSHGKMITAVGGHGGYPGGKLFVTAEEL 169
Query: 187 GRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLV 246
KL +++++ +VD DF+GSF +V + +G+ P ++LV
Sbjct: 170 REKLSHLRHEKALIVKLVDIVDFNGSFLSRVRDL----------------AGSNP-IILV 212
Query: 247 VTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKR 306
VTK+DLLP WV + ++ + +H S+ G+ +I ++ R
Sbjct: 213 VTKVDLLPRDTDLHCVGDWVVEATMRKKLN-VLSVHLTSSKSLVGITGVISEIQKEKKGR 271
Query: 307 GNVWAIGAQNAGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVE 363
+V+ +G+ N GKS +NA+ K++ D K I ++ VPGTTLG +++
Sbjct: 272 -DVYILGSANVGKSAFINALLKTMAINDPVAASAQRYKPI-----QSAVPGTTLGPIQIN 325
Query: 364 GVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTY------RIKAG----- 412
L KL+DTPG+ ++ T + E+ ++ L+ ++ ++ G
Sbjct: 326 AFL-GGGKLYDTPGVHLYHRQTAVVHSEDLPILAPQSRLRGLSFPSSILSSVEEGASTIV 384
Query: 413 -----HSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQP 467
SI GL+R+DV + E+ +T + +P+HM TE A + G L P
Sbjct: 385 NGLNAFSIFWGGLVRIDVLKVLPETC-LTFYGPKRIPIHMVPTEQAVEFYQTELGVLLTP 443
Query: 468 PIGEKRVEEL-GKWVRKEFHVSGSSWDS----SSVDIAAAGLGWFSVR-----LK----- 512
P G + E G ++ + DS + DIA +GLGWF+V LK
Sbjct: 444 PSGGENAENWKGLESERKLQIKFEDVDSYDPKPACDIAISGLGWFTVEPVSRSLKISQPK 503
Query: 513 -----GEAALGVWTYEGVDIVLRNAL 533
GE L V + V+I +R+ +
Sbjct: 504 PVETAGELILAVHVPKAVEIFVRSPI 529
>gi|160902307|ref|YP_001567888.1| hypothetical protein Pmob_0841 [Petrotoga mobilis SJ95]
gi|160359951|gb|ABX31565.1| conserved hypothetical protein [Petrotoga mobilis SJ95]
Length = 365
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 190/456 (41%), Gaps = 100/456 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ +Q + + PGY EN
Sbjct: 3 CEGCGIGIQTEDQEKPGYI-------------------------------------PENV 25
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
E K+ + VVC RC L+HY + +T+ + DF + + L VL V
Sbjct: 26 LKEKIKNNESVVCQRCFKLKHYNYLLPITINS-----DFSGELDKVLKDFE----TVLWV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF+G+F +++A+ + +GK+ + L+V KIDLLP S + +
Sbjct: 77 VDVIDFEGTFRKEIAEKI------------KGKN-----IFLIVNKIDLLPKSTPYEKLK 119
Query: 264 HWVRQRAREDGIS-KITKLHFVSAVKNWGL---KSLIDDVVDLAGKRGNVWAIGAQNAGK 319
+W+ R +E GI+ + + VS G+ K L+ L ++ +G N GK
Sbjct: 120 NWLLLRIKEMGINIRDDHVRMVSVKTGMGIEKTKQLL-----LQKEKEKALVLGVTNVGK 174
Query: 320 STLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLL 379
S+ LN + + + +T + GTTL +++ V +LFDTPG+
Sbjct: 175 SSFLNRLVE----------------AEITVSAYSGTTLKVLKA-NVPNTDLQLFDTPGIF 217
Query: 380 HPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESI--YVTV 437
+++ Q + +K++K +T+ + + + I+GL + V ++ V ++ +TV
Sbjct: 218 TQDRLCDFFDIYTQVKMIPSKKIKIKTFTVNEKNVLFISGLFWLKVLKNGVNNLPPIITV 277
Query: 438 WASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSV 497
+ + H K E ++ H L PP + + EF D +
Sbjct: 278 FLPEEISAHRAKEERVNDLL--HNREVLFPPYDNN-----FDFDQIEFERENVKIDKGN- 329
Query: 498 DIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNAL 533
DIA G GW S++ +G + +G+ V+R ++
Sbjct: 330 DIALPGAGWLSIK-RGPLIAEISKPKGLKYVIRKSM 364
>gi|159885612|dbj|BAF93184.1| nitric oxide associated 1 [Nicotiana benthamiana]
Length = 568
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 180/396 (45%), Gaps = 55/396 (13%)
Query: 142 NETSEVKK--HE-KPVVCARCHALRHYGKVKDVTVENLLP---DFDFDHTVGRKLMSASG 195
ET ++KK H+ + V+C RC L H + V F + KL
Sbjct: 133 QETYDLKKKHHQLRKVLCGRCRLLSHGHMITAVGGNGGYSGGKQFVTAEELREKLSHLRH 192
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS 255
+++++ +VD DF+GSF +V D A N ++LV+TK+DLLP
Sbjct: 193 EKALIVKLVDIVDFNGSFLARV----RDLAGANP-------------IILVITKVDLLPK 235
Query: 256 SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQ 315
WV + + ++ + +H S+ G+ ++ ++ R +V+ +G+
Sbjct: 236 ETDLNCVGDWVVEATMKKKLN-VLSVHLTSSKSLVGIAGVVSEIQKEKKGR-DVYILGSA 293
Query: 316 NAGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKL 372
N GKS +NA+ ++ D + K I ++ VPGTTLG + ++ L K+
Sbjct: 294 NVGKSAFINALLNTMSYNDPVAATARKYKPI-----QSAVPGTTLGPIPIDAFL-GGGKV 347
Query: 373 FDTPGL-LHPNQITTRLTREEQKLVNINKELKPRTY-------------RIKA----GHS 414
+DTPG+ LH Q T + L ++ L+ + + R+++ G S
Sbjct: 348 YDTPGVHLHHRQAAVIHTEDLPTLAPQSR-LRAQAFPSSGLKLESQIADRVRSSGLNGLS 406
Query: 415 IHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRV 474
I GL+R+DV + E+ +T + L LHM TE A +K G L PP G+++
Sbjct: 407 IFWGGLVRIDVLKVLPETC-LTFYGPKALQLHMVPTEEADEFYQKELGILLTPPTGKEKA 465
Query: 475 EE-LGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
+ +G +++ + + + D+A +GLGW SV
Sbjct: 466 DGWMGLETKRQLQIKYEDIERPTCDVAISGLGWLSV 501
>gi|30692870|ref|NP_850666.1| Nitric oxide synthase 1 [Arabidopsis thaliana]
gi|75115358|sp|Q66GP9.1|NOA1_ARATH RecName: Full=NO-associated protein 1, chloroplastic/mitochondrial;
Short=AtNOA1; AltName: Full=Dubious mitochondrial nitric
oxide synthase 1; Short=AtNOS1; AltName: Full=GTPase
NOA1; AltName: Full=Protein RESISTANT TO INHIBITION BY
FOSMIDOMYCIN 1; Flags: Precursor
gi|51536476|gb|AAU05476.1| At3g47450 [Arabidopsis thaliana]
gi|53850493|gb|AAU95423.1| At3g47450 [Arabidopsis thaliana]
gi|110740509|dbj|BAE98360.1| hypothetical protein [Arabidopsis thaliana]
gi|332644762|gb|AEE78283.1| Nitric oxide synthase 1 [Arabidopsis thaliana]
Length = 561
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 191/454 (42%), Gaps = 89/454 (19%)
Query: 81 LTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEA 140
++ C GCG +Q ++ PG+ LV +E
Sbjct: 105 VSCCYGCGAPLQTSDVDSPGFV-------------------------------DLVTYEL 133
Query: 141 ENETSEVKKHE--KPVVCARCHALRHYGKVKDVTVENLLP---DFDFDHTVGRKLMSASG 195
+ KKH + ++C RC L H + V P F + KL
Sbjct: 134 K------KKHHQLRTMICGRCQLLSHGHMITAVGGNGGYPGGKQFVSADELREKLSHLRH 187
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS 255
+++++ +VD DF+GSF +V +V G P ++LV+TKIDLLP
Sbjct: 188 EKALIVKLVDIVDFNGSFLARVRDLV----------------GANP-IILVITKIDLLPK 230
Query: 256 SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQ 315
WV + ++ + +H S+ G+ + ++ R +V+ +GA
Sbjct: 231 GTDMNCIGDWVVEVTMRKKLN-VLSVHLTSSKSLDGVSGVASEIQKEKKGR-DVYILGAA 288
Query: 316 NAGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKL 372
N GKS +NA+ K++ D + K I ++ VPGTTLG +++ + + KL
Sbjct: 289 NVGKSAFINALLKTMAERDPVAAAAQKYKPI-----QSAVPGTTLGPIQINAFVGGE-KL 342
Query: 373 FDTPGL-LHPNQITTRLTREEQKLVNINKELKPRTYRIKA---------------GHSIH 416
+DTPG+ LH Q + + L N+ L+ +++ I G++
Sbjct: 343 YDTPGVHLHHRQAAVVHSDDLPALAPQNR-LRGQSFDISTLPTQSSSSPKGESLNGYTFF 401
Query: 417 IAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEE 476
GL+R+D+ ++ E+ + T + L +H T+ A EK G L PP G+ +++E
Sbjct: 402 WGGLVRIDILKALPETCF-TFYGPKALEIHAVPTKTATAFYEKELGVLLTPPSGKNQMQE 460
Query: 477 L-GKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
G + + + + D+A +GLGW S+
Sbjct: 461 WKGLQSHRLLQIEINDAKRPASDVAISGLGWISI 494
>gi|261278032|gb|ACX61572.1| GTPase [Brassica juncea]
Length = 555
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 190/450 (42%), Gaps = 84/450 (18%)
Query: 81 LTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEA 140
L+ C GCG +Q ++ PG+ + +L K
Sbjct: 102 LSCCYGCGAPLQTSDVDSPGFVDLVTYDLKK----------------------------- 132
Query: 141 ENETSEVKKHE-KPVVCARCHALRHYGKVKDVTVENLL---PDFDFDHTVGRKLMSASGA 196
K H+ + V+C RC L H + V F + KL
Sbjct: 133 -------KHHQLRTVICGRCQLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRHE 185
Query: 197 RSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSS 256
+++++ +VD DF+GSF +V +V G P ++LV+TKIDLLP
Sbjct: 186 KALIVKLVDIVDFNGSFLARVRDLV----------------GANP-IILVITKIDLLPKG 228
Query: 257 LSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQN 316
WV + + ++ + +H S+ G+ + ++ R +V+ +GA N
Sbjct: 229 TDMNCIGDWVVEVTTKKKLN-VLSVHLTSSKSLDGVSGVASEIQKEKKGR-DVYILGAAN 286
Query: 317 AGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLF 373
GKS +NA+ K++ D + K I ++ VPGTTLG +++ L + KL+
Sbjct: 287 VGKSAFINALLKTMAERDPVAAAAQKYKPI-----QSAVPGTTLGPIQINAFLGGE-KLY 340
Query: 374 DTPGL-LHPNQITTRLTREEQKLVNINKELKPRTYRIKA------------GHSIHIAGL 420
DTPG+ LH Q + + L N+ L+ +++ I G++ GL
Sbjct: 341 DTPGVHLHHRQAAVVHSDDLPALAPQNR-LRGQSFDISTQSSNSTEGESLNGYTFFWGGL 399
Query: 421 MRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEEL-GK 479
+R+D+ ++ E+ + T + L +H T+ A +K G L PP G+ +++E G
Sbjct: 400 VRIDILKALPETRF-TFYGPKALEIHAVPTKTATEFYQKEVGVLLTPPSGKDQMQEWKGL 458
Query: 480 WVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
+ + + + D+A +GLGW S+
Sbjct: 459 QSHRLLRIEFNDPKRPASDVAISGLGWISI 488
>gi|357138391|ref|XP_003570776.1| PREDICTED: putative nitric oxide synthase-like [Brachypodium
distachyon]
Length = 562
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 174/390 (44%), Gaps = 44/390 (11%)
Query: 141 ENETSEVKKHE---KPVVCARCHALRHYGKVKDVTVENLLP---DFDFDHTVGRKLMSAS 194
E T E+KK + V+C RC L H V V P F + KL
Sbjct: 134 EPATYELKKRHNQLRTVLCGRCKLLSHGHMVTAVGGHGGYPGGKQFVSAEELREKLSYLR 193
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
+++++ +VD DF+GSF ++ D A N +VLV+TK+DLLP
Sbjct: 194 HEKALIVKLVDIVDFNGSFLARI----RDFAGANP-------------IVLVITKVDLLP 236
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
WV + ++ + +H S+ G+ +I ++ R +V+ +G+
Sbjct: 237 RDTDLNCIGDWVVEAVVRKKLN-VLSVHLTSSKSLVGITGVISEIQQEKKAR-DVYILGS 294
Query: 315 QNAGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAK 371
N GKS ++A+ K++ D + K I ++ VPGTTLG +++E L K
Sbjct: 295 ANVGKSAFISAMLKTMAYKDPVAAAAQKYKPI-----QSAVPGTTLGPIQIEAFL-GGGK 348
Query: 372 LFDTPGL-LHPNQITTRLTREEQKLVNINKELKPRTYRIK------AGHSIHIAGLMRMD 424
L+DTPG+ LH Q + ++ + LK R + +G+++ GL+R+D
Sbjct: 349 LYDTPGVHLHHRQAAV-IHADDLPSLAPQSRLKGRCFPANDTDVGLSGNTLFWGGLVRID 407
Query: 425 VEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEE-LGKWVRK 483
V + ++ + + L ++M T A E+ G L PP G++R E G +
Sbjct: 408 VVK-ALPRTRLAFYGPKKLNINMVPTTEADEFYEREVGVTLTPPTGQERAEGWCGLQGVR 466
Query: 484 EFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
E + D + DIA +GLGW +V G
Sbjct: 467 ELQIKYEELDRPACDIAISGLGWITVEPLG 496
>gi|326519915|dbj|BAK03882.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 561
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 175/390 (44%), Gaps = 44/390 (11%)
Query: 141 ENETSEVKKHE---KPVVCARCHALRHYGKVKDVTVENLLP---DFDFDHTVGRKLMSAS 194
E T ++KK K V+C RC L H V V P F + KL
Sbjct: 133 EPATYDLKKRHNQLKTVLCGRCKLLSHGHMVTAVGGHGGYPGGKQFVSAEELREKLSYLR 192
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
+++++ +VD DF+GSF ++ D A N +VLV+TK+DLLP
Sbjct: 193 HEKALIVKLVDIVDFNGSFLARI----RDFAGANP-------------IVLVITKVDLLP 235
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
WV + ++ + +H S+ G+ +I ++ R +V+ +G+
Sbjct: 236 RDTDLNCIGDWVVESVVRKKLN-VLSVHLTSSKSLVGITGVISEIQQEKKAR-DVYILGS 293
Query: 315 QNAGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAK 371
N GKS ++A+ K++ D + K I ++ VPGTTLG +++E L K
Sbjct: 294 ANVGKSAFISAMLKTMAYKDPVAAAAQKYKPI-----QSAVPGTTLGPIQIEAFL-GGGK 347
Query: 372 LFDTPGL-LHPNQITTRLTREEQKLVNINKELKPRTYRIK------AGHSIHIAGLMRMD 424
L+DTPG+ LH Q + ++ + LK R + +G+++ GL+R+D
Sbjct: 348 LYDTPGVHLHHRQAAV-IHADDLPSLAPQSRLKGRCFPANDTDVGLSGNTLFWGGLVRID 406
Query: 425 VEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEE-LGKWVRK 483
+ + ++ +T + L ++M T A ++ G L PP G++R E G +
Sbjct: 407 IVK-ALPRTRLTFYGPKKLSINMVPTTEADEFYKREVGVTLTPPTGQERAEGWCGLQGVR 465
Query: 484 EFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
E + D + DIA +GLGW +V G
Sbjct: 466 ELQIKYEELDRPASDIAISGLGWIAVEPLG 495
>gi|269120434|ref|YP_003308611.1| GTP-binding protein HSR1-like protein [Sebaldella termitidis ATCC
33386]
gi|268614312|gb|ACZ08680.1| GTP-binding protein HSR1-related protein [Sebaldella termitidis
ATCC 33386]
Length = 379
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 188/455 (41%), Gaps = 101/455 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ +Q P++ GY V+ E + +
Sbjct: 6 CSGCGITLQTEFPENAGY------------------VSEEKFITGT-------------- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
++C RC+ ++HYGK +D+ + +++ A ++L +
Sbjct: 34 ---------DILCQRCYRIKHYGKHQDIELTK--------EDYKKEVEDAVKKSDIILAI 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
D DF+GSF ++ + + ++++ KIDLLP ++ P+
Sbjct: 77 FDIIDFEGSFSEEILDFLREYNS-----------------IVMINKIDLLPKTIHPSEIS 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
WV+ R E+GI + +S +G+ ++ + + +G N GKS+ +
Sbjct: 120 DWVKGRLEEEGIVPYD-IALMSTKTKYGVNGVLRKIKSFK-ENATAVVLGVTNTGKSSFM 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIV--RVEGVLPAQAKLFDTPGLLHP 381
N++ + ++K+ +S PGTTL + +++G K+ DTPGL+
Sbjct: 178 NSLME----------KDKSTISKY-----PGTTLKSIKNKIDG---TDIKIIDTPGLIPE 219
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLM--RMDVEESSVESIYVTVWA 439
+I+ L +E + N E+ +T++ GLM R+ VEE I+ + +A
Sbjct: 220 KRISDLLEPKEALALVPNGEINRKTFKPDNNQVFFFDGLMWFRVIVEEDEKSPIF-SAFA 278
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
+ + H+ K + ++ K F P ++ K ++ V ++
Sbjct: 279 AKDIKFHVTKKDRVEDLLNKDF---FTFPSKTEKDAYYQKMKKETLTVEAFE------EM 329
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
A +GLGW +V+ +G + + E V IV+RN ++
Sbjct: 330 AISGLGWINVK-RGPLKIELSYPENVKIVIRNGII 363
>gi|160915285|ref|ZP_02077498.1| hypothetical protein EUBDOL_01294 [Eubacterium dolichum DSM 3991]
gi|158433084|gb|EDP11373.1| putative ribosome biogenesis GTPase YqeH [Eubacterium dolichum DSM
3991]
Length = 358
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 178/410 (43%), Gaps = 64/410 (15%)
Query: 132 KGGLVVFEAENETSEVKKHEKPV-VCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKL 190
KG VV ++E+ + +K +C RC + HY V ++++ + ++ L
Sbjct: 6 KGCGVVLQSEDAKALGYTPKKDADLCQRCFRIIHYDDVT-ISMKQGIDSYEV-------L 57
Query: 191 MSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKI 250
++VL VVD DF+ + + + + GK +VLV TK
Sbjct: 58 QKIQAMNALVLWVVDVFDFEANMLHGINRHLL------------GKD-----IVLVATKR 100
Query: 251 DLLPSSLSPTRFEHWVRQRAREDGI--SKITKLHFVSAVKNWGLKSLIDDV---VDLAGK 305
DLLP++L + ++ R +E GI S I ++ + I+ V +D K
Sbjct: 101 DLLPATLGNEKLGKFILSRLKELGIVVSGIVICGDLAKHAHEEYNDSIEQVEQAIDYYRK 160
Query: 306 RGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGV 365
+V +G NAGKSTLLNA+ S LT + PGTTL V +
Sbjct: 161 GRDVVVMGMANAGKSTLLNAMCDS---------------RQLTTSRHPGTTLD---VNAI 202
Query: 366 LPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV 425
L L+DTPGL + + T + K V K LKPR Y++ ++ + GL+R+D+
Sbjct: 203 LHHDYLLYDTPGLTREDSLLTHVDDRLLKQVIPLKPLKPRVYQLYEASTMSLGGLVRLDL 262
Query: 426 EESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEF 485
E + + S L LH K A + +KH+ L P I ++ R E
Sbjct: 263 --IGCEQVSCVAYFSENLKLHRSKQPKAEELWKKHYAEMLSPTIASLEEQQ-----RFEH 315
Query: 486 H-VSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
H V G +D+ GLGWF + K + + V+ + ++ R A++
Sbjct: 316 HGVDG------KLDVVIHGLGWFCISGKLDEIV-VYVPKNGNVTFRKAMI 358
>gi|124810009|ref|XP_001348738.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
gi|23497637|gb|AAN37177.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
Length = 797
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 140/296 (47%), Gaps = 10/296 (3%)
Query: 243 VVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSL---IDDV 299
++ +V K+D LP S + + W R R+ S I L F+SA+K + L +
Sbjct: 423 IIWLVNKVDCLPKSTNLDMIKIWFRNLVRQIKNSHINDLIFISALKFYNYDMLEERMKYY 482
Query: 300 VDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGI 359
VD+ K +++ +G N GKST +N+ K ++ GD K +T + +P TTL
Sbjct: 483 VDI-DKGTDIYIVGCVNVGKSTFVNSFLKYINYKHIGDIYNKRKKGGVTTSNIPYTTLNY 541
Query: 360 VRVEGVLPAQAKLFDTPGLLHPNQITTRLTRE-EQKLVNINKELKPRTYRIKAGHSIHIA 418
+ L + DT G+ Q ++ L ++ + + INK+++P TY++K SI I
Sbjct: 542 NVFK--LKKNINIIDTIGIPTKYQYSSILYKDIDLNGICINKKIQPFTYKLKEDSSIIIG 599
Query: 419 GLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELG 478
+ ++ + + T + S + +HM +TE + +EK L PP + L
Sbjct: 600 SMCYINFIHGTFSLL--TFYLSNKVTVHMCRTEKVESFLEKKKCSFLYPPHINSDFDLLK 657
Query: 479 KWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+V+ + G ++S DI + LGWFS+ G ++ + + I R +++
Sbjct: 658 PFVKHTIKIYGKDFESVD-DIVISDLGWFSITGSGTKIFEIYVPKNIKIYRRPSMI 712
>gi|42565686|ref|NP_190329.2| Nitric oxide synthase 1 [Arabidopsis thaliana]
gi|332644761|gb|AEE78282.1| Nitric oxide synthase 1 [Arabidopsis thaliana]
Length = 561
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/454 (23%), Positives = 190/454 (41%), Gaps = 89/454 (19%)
Query: 81 LTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEA 140
++ C GCG +Q ++ PG+ LV +E
Sbjct: 105 VSCCYGCGAPLQTSDVDSPGFV-------------------------------DLVTYEL 133
Query: 141 ENETSEVKKHE--KPVVCARCHALRHYGKVKDVTVENLLP---DFDFDHTVGRKLMSASG 195
+ KKH + ++C RC L H + V P F + KL
Sbjct: 134 K------KKHHQLRTMICGRCQLLSHGHMITAVGGNGGYPGGKQFVSADELREKLSHLRH 187
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS 255
+++++ +VD DF+GSF +V +V G P ++LV+TKIDLLP
Sbjct: 188 EKALIVKLVDIVDFNGSFLARVRDLV----------------GANP-IILVITKIDLLPK 230
Query: 256 SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQ 315
WV + ++ + +H S+ G+ + ++ R +V+ +GA
Sbjct: 231 GTDMNCIGDWVVEVTMRKKLN-VLSVHLTSSKSLDGVSGVASEIQKEKKGR-DVYILGAA 288
Query: 316 NAGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKL 372
N GKS +NA+ K++ D + K I ++ VPGTTLG +++ + + KL
Sbjct: 289 NVGKSAFINALLKTMAERDPVAAAAQKYKPI-----QSAVPGTTLGPIQINAFVGGE-KL 342
Query: 373 FDTPGL-LHPNQITTRLTREEQKLVNINKELKPRTYRIKA---------------GHSIH 416
+DTPG+ LH Q + + L N+ L+ +++ I G++
Sbjct: 343 YDTPGVHLHHRQAAVVHSDDLPALAPQNR-LRGQSFDISTLPTQSSSSPKGESLNGYTFF 401
Query: 417 IAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEE 476
GL+R+D+ ++ E+ + T + L +H T+ A E G L PP G+ +++E
Sbjct: 402 WGGLVRIDILKALPETCF-TFYGPKALEIHAVPTKTATAFYEAKLGVLLTPPSGKNQMQE 460
Query: 477 L-GKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
G + + + + D+A +GLGW S+
Sbjct: 461 WKGLQSHRLLQIEINDAKRPASDVAISGLGWISI 494
>gi|294955562|ref|XP_002788567.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239904108|gb|EER20363.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 574
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 166/353 (47%), Gaps = 35/353 (9%)
Query: 198 SVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP-SS 256
S+VLM+VD DF+ S V ++ ++N + V+ V+ KID +P
Sbjct: 162 SLVLMLVDILDFESSI---VPELFESCRQKNLQ------------VMFVINKIDGIPFYE 206
Query: 257 LSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDL--AGKRGNVWAIGA 314
+ W + +R+ + + + VS++ G L D + A K ++ +G
Sbjct: 207 KKKHQIRQWATRMSRQIKNAHWSDVVLVSSLNGTGFAELEDRMRQYLSADKPRWIYIVGR 266
Query: 315 QNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFD 374
N GKST +N + + G K +T +PVPGTT+ V LP + +L D
Sbjct: 267 VNTGKSTFVNRWLRHIGYTHLGTVNYKRGTGGITRSPVPGTTMQFVTFG--LPRKFRLVD 324
Query: 375 TPGLLHPNQITTRLTREEQKLVNIN----KELKPRTYRIKAGHSIHIAG-LMRMDVEESS 429
+PG+ Q+++ L + + L +++ ++P T+ IK G S+ I G L R+D + +S
Sbjct: 325 SPGIPSKVQLSSFL-EDPKDLYDLSLCRQHPVRPVTHTIKPGRSLIIGGGLARIDHKGAS 383
Query: 430 VES-----IYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPP-IGEKRVEELGKWVRK 483
+ ++++ + S + LH+ T+ A + + G + PP + R+ L K
Sbjct: 384 TQGMHAQPVFLSCFVSNKVTLHVIDTKKAEDFLTRRKGTFMYPPHSADARLPPLTK---H 440
Query: 484 EFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPY 536
V + ++ DI+ AGLGW +V G L VW EGV + R A+LP+
Sbjct: 441 NVEVYAPNPHTAMDDISIAGLGWITVYGYGHEELTVWVPEGVKVFRRPAMLPF 493
>gi|294955564|ref|XP_002788568.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239904109|gb|EER20364.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 574
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 164/352 (46%), Gaps = 33/352 (9%)
Query: 198 SVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP-SS 256
S+VLM+VD DF+ S V ++ ++N + V+ V+ KID +P
Sbjct: 162 SLVLMLVDILDFESSI---VPELFESCRQKNLQ------------VMFVINKIDGIPFYE 206
Query: 257 LSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDL--AGKRGNVWAIGA 314
+ W + +R+ + + + VS++ G L D + A K ++ +G
Sbjct: 207 KKKHQIRQWATRMSRQIKNAHWSDVVLVSSLNGTGFAELEDRMRQYLSADKPRWIYIVGR 266
Query: 315 QNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFD 374
N GKST +N + + G K +T +PVPGTT+ V LP + +L D
Sbjct: 267 VNTGKSTFVNRWLRHIGYTHLGTVNYKRGTGGITRSPVPGTTMQFVTFG--LPRKFRLVD 324
Query: 375 TPGLLHPNQITTRLTREEQKLVNIN----KELKPRTYRIKAGHSIHIAG-LMRMDVEESS 429
+PG+ Q+++ L + + L +++ ++P T+ IK G S+ I G L R+D + +S
Sbjct: 325 SPGIPSKVQLSSFL-EDPKDLYDLSLCRQHPVRPVTHTIKPGRSLIIGGGLARIDHKGAS 383
Query: 430 VES-----IYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKE 484
+ ++++ + S + LH+ T+ A + + G + PP +L +
Sbjct: 384 TQGMHAQPVFLSCFVSNKVTLHVIDTKKAEDFLTRKKGTFMYPPHSAD--AKLPPLTKHN 441
Query: 485 FHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPY 536
V + ++ DI+ AGLGW +V G L VW EGV + R A+LP+
Sbjct: 442 VEVYAPNPHTAMDDISIAGLGWITVYGYGHEELTVWVPEGVKVFRRPAMLPF 493
>gi|156100137|ref|XP_001615796.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804670|gb|EDL46069.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 795
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 155/329 (47%), Gaps = 10/329 (3%)
Query: 243 VVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDV--- 299
++ +V K+D LP + R + W R R+ + I L F+SA+K + L + +
Sbjct: 421 IIWLVNKVDCLPKMANLERVKIWFRNLVRQIKNAHINDLIFISALKFFNFNVLEERMKFH 480
Query: 300 VDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGI 359
VDL K +++ +G N GKST +N+ K ++ GD + +T + +P TTL
Sbjct: 481 VDLE-KGTDIYIVGCVNVGKSTFVNSFLKYINYKHLGDIYSRRKKGGVTTSNIPYTTLNY 539
Query: 360 VRVEGVLPAQAKLFDTPGLLHPNQITTRLTRE-EQKLVNINKELKPRTYRIKAGHSIHIA 418
+ L K+ DT G+ Q ++ L ++ + ++ +K ++P TY++K S+ +
Sbjct: 540 NTFQ--LKKNIKIIDTMGIPTKYQYSSILYKDIDLNSISFHKRIQPLTYKLKENASLILG 597
Query: 419 GLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELG 478
L +++ S +T++ S + +HM ++E + +E+ L PP + E L
Sbjct: 598 SLCYINLVYGSF--TLLTLYISNRVTIHMCRSEKVESFLERKKCSFLYPPHVKADFELLK 655
Query: 479 KWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRS 538
+V+ V G ++S DI L WFSV +G ++ + + I R +++
Sbjct: 656 PFVKHTVKVVGKDFESID-DIVIGDLCWFSVTGRGIKVFEIYAPKNLKIYRRPSMISDAV 714
Query: 539 QVFEVAGFTVSKIISKADQSLNKSKRLNE 567
+ +V F + + L K K+L E
Sbjct: 715 RHTQVDVFKCKSYRGRTAKVLRKKKKLIE 743
>gi|399218226|emb|CCF75113.1| unnamed protein product [Babesia microti strain RI]
Length = 582
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 113/500 (22%), Positives = 190/500 (38%), Gaps = 76/500 (15%)
Query: 84 CPGCGVLMQDTNPKHPGY----FIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFE 139
C GCG Q +P PGY + S KV + + S+ G V +
Sbjct: 61 CIGCGSKFQSVDPAKPGYVHDGILHSSHARGKVVWPEI-----RGKVVESVPDG--VRVD 113
Query: 140 AENETSEVKKHEKPVVCARCHALRHYGKVKD-------------------VTVENLLPD- 179
++ + K + V+C C+ L++Y ++ V N+ P
Sbjct: 114 RVDDLKFIAKRRR-VICKYCYKLQYYKRIDGEITPIYRPQIPENREAESRVVAHNMTPSK 172
Query: 180 -----------------FDFDHT--VGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKM 220
F H+ + +L+ S+++ V+D + + + ++
Sbjct: 173 KVVKLPVECQVAIANEGFKISHSPEIISQLVYQIRPNSIIIYVLDLTNIEVTMLPELYIA 232
Query: 221 VSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITK 280
+S+ E V+ V+ K D+LP S R + W R+ + G
Sbjct: 233 LSNKKLE---------------VIFVLNKSDVLPHGTSLPRVKMWSRRLVKHLGNVHNEN 277
Query: 281 LHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEE 340
+ S+ +G L + ++ +G+ N GKSTL+N V G
Sbjct: 278 VIVCSSTSGYGFDKLEQRLEHYLCNNKYIYVVGSVNVGKSTLVNRFLTYVGYKEIGTIFS 337
Query: 341 KNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTRE-EQKLVNIN 399
K V +T + VPGTTLG V L KL DTPG+ Q++T L + + + I
Sbjct: 338 KRAVGGITRSSVPGTTLG--HVTFGLGKGIKLVDTPGIPIGGQMSTILPKSIDLCAIAIT 395
Query: 400 KELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEK 459
K ++P + S+ I L R+D + + +T + S L K A ++++
Sbjct: 396 KPIQPVKVILNEYQSLIIGALARVDNVKGC--DLNITCYTSQKLTYKTCKLNKAGDLMKE 453
Query: 460 HFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGV 519
H L PP ++ +E LG W E ++G S DI GLGW + G +
Sbjct: 454 HGSVSLHPPFFKEDLESLGDWSIYELELNG-----ESCDIVIPGLGWLTFYGNGPKTTNI 508
Query: 520 WTYEGVDIVLRNALLPYRSQ 539
V + R +L R Q
Sbjct: 509 HIPSSVKLFKRPVMLSPRRQ 528
>gi|50365167|ref|YP_053592.1| GTPase [Mesoplasma florum L1]
gi|50363723|gb|AAT75708.1| predicted GTPase [Mesoplasma florum L1]
Length = 365
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 180/436 (41%), Gaps = 98/436 (22%)
Query: 81 LTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEA 140
++ C GCG+L Q+ + PGY I+P
Sbjct: 1 MSKCIGCGILKQNKDQNKPGYVIKP----------------------------------- 25
Query: 141 ENETSEVKKHEKPVVCARCHALRHYGKV--KDVTVENLLPDFDFDHTVGRKLMSASGARS 198
ENE C RC +++Y ++ +++ E + + L+ +
Sbjct: 26 ENE-----------YCLRCFKIKNYNELINQEINAEQFILKL-------KTLIQNDKPKD 67
Query: 199 V-VLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSL 257
+ ++D D +GS +E E A K P V +VV KIDLLP ++
Sbjct: 68 IEFFYIIDIFDLEGS-----------RVKEIEEAIKR-----YP-VTIVVNKIDLLPKAV 110
Query: 258 SPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNA 317
+ ++ + I + ++ KN SL++ + + + IG+ N
Sbjct: 111 KLAKIRRYITDLFAKSAIYD-ANIILNTSFKNNFTNSLLNKI---KKTKTKKYFIGSSNV 166
Query: 318 GKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPG 377
GKS+++N++ ++ N++ + E+ TTL ++++ L + +FDTPG
Sbjct: 167 GKSSIINSLLRT-----------NNLIPQIVESKYFNTTLDFIQIK--LSSDDIIFDTPG 213
Query: 378 LLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTV 437
+ N L +E+ K + NKE+ T+++K +SI AG+ +D E S E
Sbjct: 214 IARSNSAANLLDKEDWKYIYFNKEVAQNTFQLKPFNSIFYAGIAWVDFEWESDEINSFHF 273
Query: 438 WASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSV 497
+ + + LH T+NA ++ + P + +V++EF + +
Sbjct: 274 FNNKEIKLHRTNTKNAFDYYTRN-KENIVPYNLD------NNFVKREFIFNEKDIN-KEF 325
Query: 498 DIAAAGLGWFSVRLKG 513
+I+ +GLGWF+ ++K
Sbjct: 326 EISISGLGWFNFKVKN 341
>gi|222622006|gb|EEE56138.1| hypothetical protein OsJ_05018 [Oryza sativa Japonica Group]
Length = 427
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 172/378 (45%), Gaps = 43/378 (11%)
Query: 148 KKHE--KPVVCARCHALRHYGKVKDVTVENLL---PDFDFDHTVGRKLMSASGARSVVLM 202
K+H + V+C RC L H + V F + KL +++++
Sbjct: 7 KRHHQLRTVLCGRCKLLSHGHMITAVGGHGGYPGGKQFVSADQLRDKLSYLRHEKALIIK 66
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
+VD DF+GSF +V D A N ++LV+TK+DLLP
Sbjct: 67 LVDIVDFNGSFLARV----RDFAGANP-------------IILVITKVDLLPRDTDLNCI 109
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
WV + + ++ + +H S+ G+ +I ++ R +V+ +G+ N GKS
Sbjct: 110 GDWVVEAVVKKKLN-VLSVHLTSSKSLVGVTGVISEIQQEKKGR-DVYILGSANVGKSAF 167
Query: 323 LNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGL- 378
++A+ +++ D + K I ++ VPGTTLG +++E L KL+DTPG+
Sbjct: 168 ISAMLRTMAYKDPVAAAAQKYKPI-----QSAVPGTTLGPIQIEAFL-GGGKLYDTPGVH 221
Query: 379 LHPNQITTRLTREEQKLVNINKELKPRTYRIK------AGHSIHIAGLMRMDVEESSVES 432
LH Q + ++ + L+ R + +G+S+ GL+R+DV + ++
Sbjct: 222 LHHRQAAV-IHADDLPSLAPQSRLRARCFPANDTDVGLSGNSLFWGGLVRIDVVK-ALPR 279
Query: 433 IYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEE-LGKWVRKEFHVSGSS 491
+T + L ++M T A E+ G L PP G+++ E +G +E +
Sbjct: 280 TRLTFYGPKKLKINMVPTTEADEFYEREVGVTLTPPAGKEKAEGWVGLQGVRELQIKYEE 339
Query: 492 WDSSSVDIAAAGLGWFSV 509
D + DIA +GLGW +V
Sbjct: 340 SDRPACDIAISGLGWVAV 357
>gi|340054098|emb|CCC48392.1| conserved hypothetical protein, fragment, partial [Trypanosoma
vivax Y486]
Length = 743
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 132/538 (24%), Positives = 204/538 (37%), Gaps = 121/538 (22%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANE-----SEFSNSLKKGGLVV 137
C GCG L+QD + GY R V + + V E SE KK G V
Sbjct: 138 CCSGCGALLQDRDENSFGYVRRGDIERYIVERQRKMKVKAEYADRMSELQAHWKKHGRCV 197
Query: 138 FE-------AENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKL 190
E E + + P VC RCHAL + G V + PDF KL
Sbjct: 198 GEEWLDFMTQEEFDAFYRDRNSPFVCYRCHALENLGVEGRRRVWS-APDFT------EKL 250
Query: 191 MSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKI 250
+ + VV++VVD DF G+ + ++S + V++ V K+
Sbjct: 251 RALREKKCVVVLVVDITDFPGTMVYDLPGLISMNND----------------VIIAVNKM 294
Query: 251 DLLPSS---------------LSPTRFEHWVRQRAREDGISK--ITKLHFVSAVKNWGLK 293
D + + L +WV A + G+ + I + +SA + W ++
Sbjct: 295 DCIRNRSFNYSGKDKAVAACLLKEQYVRNWVTDIAVQFGLPRHQIKDVVPISAKRGWNIE 354
Query: 294 SLIDDVVDLAG-------KRGNVWAIGAQNAGKSTLLNAIA--------------KSVDA 332
LI V + + K + +G N GKS++LNAIA K
Sbjct: 355 KLIGTVEEASNLNLRRPVKPMMTYFVGVANVGKSSVLNAIAHKLYIPLPPHPESRKVYYT 414
Query: 333 GRGGDGEE-------------------------KNIVSHLTEAPVPGTTL--GIVRV--- 362
+ DG E K LT + +PGTT+ VRV
Sbjct: 415 KKAKDGTEAVFWRWYTPPNVNQAEMIDIPSRHDKKASKLLTVSSLPGTTVEATAVRVSLT 474
Query: 363 EGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMR 422
+G +A LFDTPGLL + LT + + I K P+ + + G+++ ++GL
Sbjct: 475 KGTSGEKAYLFDTPGLLPHWHRHSPLTLLQMRRTLIRKYRNPQCFILVPGNTLLLSGLAA 534
Query: 423 MDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPP-----IGEKRVEEL 477
+D+ + + + V+ S + + TE + + G+ L PP +GE R+ E
Sbjct: 535 IDIVKGTSRGLLFMVYTSQKVRSAIINTERSDEFWREQLGKALDPPGSLEQLGELRLTES 594
Query: 478 GKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLP 535
++ F D+ G+GW AA V E D+VLR LP
Sbjct: 595 KSYL---FECYKRHRRRPKADVYVCGIGW--------AAFCV--NEPCDVVLRVRTLP 639
>gi|167998362|ref|XP_001751887.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696985|gb|EDQ83322.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 455
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 186/441 (42%), Gaps = 79/441 (17%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q + + PG+ S ++ +V+K H
Sbjct: 23 CYGCGAVLQSSTAEAPGFL---SLDIFEVKKKH--------------------------- 52
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPD---FDFDHTVGRKLMSASGARSVV 200
V+C RC L + V+ + F + +L ++++
Sbjct: 53 -----HQLGTVLCGRCQLLSQGAMIPAVSGNGGYGEGKGFVSSDELRAQLTHLRYEKALI 107
Query: 201 LMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPT 260
+ +VD DF+GSF +V +V G+ P ++LVVTK+DLLP
Sbjct: 108 VKLVDIVDFNGSFLTRVRDLV----------------GSNP-IILVVTKVDLLPKGTDLA 150
Query: 261 RFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG-NVWAIGAQNAGK 319
WV Q ++ I+ +H SA G+ + L ++G +V+ +G+ N GK
Sbjct: 151 AVGDWVIQATIAKKLNVIS-VHLTSAKAATGISGF--SALMLRQRQGRDVYVLGSANVGK 207
Query: 320 STLLNAIAKSVDAGRGGDGEEKNIVSHL-----TEAPVPGTTLGIVRVEGVLPAQAKLFD 374
S ++ + + + GE I + ++ +PGTTLG ++++ L+D
Sbjct: 208 SAFISTLLRDM-------GERDPIAAAAQRFRPIQSAMPGTTLGPIQIDA-FSGGGSLYD 259
Query: 375 TPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIK------AGHSIHIAGLMRMDVEES 428
TPG+ +++ ++ E+ L+ K L R G SI G++R+DV E+
Sbjct: 260 TPGVHLHHRLAAAVSPEDLPLLAPRKRLAGRLISAPDPSLSLVGQSIFWGGVVRIDVLEA 319
Query: 429 SVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVS 488
E+I +T + +P+ T A EK G +L PP G++ G ++ +
Sbjct: 320 P-ENIALTFYGPNSIPVLGTLTPQAEVFYEKEVGVRLFPPGGDRAKNWPGLVNQEVVRFT 378
Query: 489 GSSWDSSSVDIAAAGLGWFSV 509
+S + D+A +GLGW +V
Sbjct: 379 VNSRKRPAGDLAISGLGWIAV 399
>gi|389843658|ref|YP_006345738.1| GTPase [Mesotoga prima MesG1.Ag.4.2]
gi|387858404|gb|AFK06495.1| putative GTPase [Mesotoga prima MesG1.Ag.4.2]
Length = 368
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 180/456 (39%), Gaps = 104/456 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q +P GY R S + L+ G
Sbjct: 3 CGGCGAELQHDDPAGLGYISR-------------------SVMESRLQSG---------- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDV-----TVENLLPDFDFDHTVGRKLMSASGARS 198
K V+C RC ++HYG + + +++NL D V
Sbjct: 34 --------KQVLCRRCFLIKHYGSLSEDDRVVHSIDNLKEYLDLAQDV------------ 73
Query: 199 VVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLS 258
+ V+D +DFDG+ R + +++ + V ++ KIDLLP +
Sbjct: 74 --IYVIDISDFDGTCRRDILRLLKEHT-----------------VHYILNKIDLLPREVK 114
Query: 259 PTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAG 318
W + + K T + VS +KN GLKSL L ++G N G
Sbjct: 115 IDEIRDWAASMLK---VPKET-VRPVSVLKNHGLKSLFSY---LKSASEEFVSVGVTNVG 167
Query: 319 KSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGL 378
KS++LN + +S LT + PGTT+ + + V + ++DTPG+
Sbjct: 168 KSSILNGLIQS---------------EELTVSRFPGTTVKVAS-KKVGGSAFTVYDTPGI 211
Query: 379 LHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVW 438
++IT L+ E+Q K+L T + ++ + G +R+DV+ S V+
Sbjct: 212 FTKDRITDLLSVEDQSRFLPRKKLNKSTIQFHDVRTVFLGGFVRLDVKNESDPVGIFHVF 271
Query: 439 ASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVD 498
+ +H ++ ++ +G L+PP E + KW + F + + +
Sbjct: 272 VPESVTVHETNSDTGNEEWDRWYGGILKPPFSES-IRSNYKWKSERFRL------ITGQE 324
Query: 499 IAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+ G+GW +V KG + V T EGV +R L+
Sbjct: 325 LHIFGMGWINV-AKGPLTIAVTTPEGVATKVRKGLI 359
>gi|218281649|ref|ZP_03488050.1| hypothetical protein EUBIFOR_00617 [Eubacterium biforme DSM 3989]
gi|218217256|gb|EEC90794.1| hypothetical protein EUBIFOR_00617 [Eubacterium biforme DSM 3989]
Length = 359
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 174/387 (44%), Gaps = 66/387 (17%)
Query: 156 CARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPR 215
C RC+ +RHYG DVT+ N+ + + T+ K+ G VV VVD F+ +
Sbjct: 31 CQRCYRIRHYG---DVTI-NMQQGIESNATL-EKINKIDG---VVFWVVDLFAFEANLIS 82
Query: 216 KVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGI 275
++ + + GK +V+V+TK D+LP++L+ + ++V+ R E+ I
Sbjct: 83 RLNQKLP------------GKD-----IVMVLTKRDVLPTTLTDEKIINFVKHRLHEENI 125
Query: 276 SKITKLHFVSAV------KNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
I K + K+ S I + + K NV +G NAGKST+LN + +
Sbjct: 126 --IVKDIVICGYLLKENDKSREYSSRIVNAILKYRKNRNVIFMGVANAGKSTVLNHLLAT 183
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQ-AKLFDTPGLLHPNQITTRL 388
D LT + PGTTL +V + P + ++DTPG+ + + + T L
Sbjct: 184 KD---------------LTTSQNPGTTLDLVPI----PFEDYTIYDTPGIENTHSLLTYL 224
Query: 389 TREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMG 448
++ K V K ++P +I S AGL R+DV S + V + S L +H G
Sbjct: 225 QSKDLKTVIPTKPIRPFVSQIFEDQSFAAAGLARLDVVVSGKAT--VVGYFSRSLSIHRG 282
Query: 449 KTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFS 508
K NA + +KH L P + + FH + +D+ G+GWF
Sbjct: 283 KLSNADALWQKHLNGMLVPCV------DTSLLTMHTFH--APKLEDEKMDVCIHGIGWFC 334
Query: 509 VRLKGEAA-LGVWTYEGVDIVLRNALL 534
+ G+ + V ++G+ + R A++
Sbjct: 335 I--SGQVKDVYVKVHKGIQVTFRKAMI 359
>gi|255539795|ref|XP_002510962.1| Nitric-oxide synthase, putative [Ricinus communis]
gi|223550077|gb|EEF51564.1| Nitric-oxide synthase, putative [Ricinus communis]
Length = 567
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 185/451 (41%), Gaps = 84/451 (18%)
Query: 81 LTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEA 140
+ C GCG +Q + + PGY
Sbjct: 112 VVCCYGCGAPLQTLDQEAPGY--------------------------------------V 133
Query: 141 ENETSEVKKHE---KPVVCARCHALRHYGKVKDVTVENLLP---DFDFDHTVGRKLMSAS 194
+ +T E+KK + V+C RC L H + V F + KL
Sbjct: 134 QPDTYELKKRHHQLRTVLCGRCKLLSHGHMITAVGGNGGYSGGKQFVSADELREKLSHLR 193
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
R +V+ +VD DF+GSF ++ D A N ++LVVTK+DLLP
Sbjct: 194 YERVLVVKLVDIVDFNGSFLARI----RDLAGANP-------------IILVVTKVDLLP 236
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
WV + + ++ + +H S+ G+ ++ ++ R +V+ +G+
Sbjct: 237 KETDFNCIGDWVVEATTKKKLN-VLSVHLTSSKSLVGIAGVVSEIQKEKKGR-DVYILGS 294
Query: 315 QNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFD 374
N GKS +NA+ K + A R + A VPGTTLG ++++ L KLFD
Sbjct: 295 ANVGKSAFINALLKMM-AQRDPAAAAARKYRPIQSA-VPGTTLGSIQIDAFL-GGGKLFD 351
Query: 375 TPGL-LHPNQITTRLTREEQKLVNINKELKPRTYRIKA------------GHSIHIAGLM 421
TPG+ LH Q + E+ ++ L+ +++ + + G SI GL+
Sbjct: 352 TPGVHLHHRQAAV-VQSEDLPILAPRSRLRGQSFPVCSLQTDKFESNGLNGFSIFWGGLV 410
Query: 422 RMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVE--KHFGRQLQPPIGEKRVEEL-G 478
R+DV + E+ +T + L H+ T+ A + K G L PP G + ++ G
Sbjct: 411 RIDVLKVLPET-SLTFYGPKALQFHIVPTDEADEFYQASKELGVLLTPPTGIEGAKDWKG 469
Query: 479 KWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
+ ++ + + + D+A +GLGW +V
Sbjct: 470 LGIIRQLQIKFEDAERPASDVAISGLGWIAV 500
>gi|340756111|ref|ZP_08692744.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. D12]
gi|373114391|ref|ZP_09528604.1| ribosome biogenesis GTPase YqeH [Fusobacterium necrophorum subsp.
funduliforme 1_1_36S]
gi|419841285|ref|ZP_14364660.1| ribosome biogenesis GTPase YqeH [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|421500652|ref|ZP_15947644.1| ribosome biogenesis GTPase YqeH [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
gi|313686863|gb|EFS23698.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. D12]
gi|371652385|gb|EHO17801.1| ribosome biogenesis GTPase YqeH [Fusobacterium necrophorum subsp.
funduliforme 1_1_36S]
gi|386905611|gb|EIJ70371.1| ribosome biogenesis GTPase YqeH [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|402267206|gb|EJU16602.1| ribosome biogenesis GTPase YqeH [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
Length = 362
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/458 (20%), Positives = 184/458 (40%), Gaps = 100/458 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ +Q+T+ K GY
Sbjct: 5 CIGCGIPLQNTDSKKGGY------------------------------------------ 22
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T + ++ + C RC + HYG+ + L D+ ++L + + L +
Sbjct: 23 TPKDLTGKEELYCQRCFRISHYGEHSS----SFLSREDYQ----KELQQWVSPQRLALAI 74
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
D DF+GSF + ++ + ++V+ K+DL+P P+
Sbjct: 75 FDIIDFEGSFQDDILDILREMDS-----------------IVVINKVDLIPGEKHPSEVA 117
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+WV+ R +GI+ + + VS N+G+ ++ + V +G N GKS+++
Sbjct: 118 NWVKGRLASEGIAPL-DIAIVSCKNNYGMNGILRKIHHFYPNGVEVLVLGVTNVGKSSVV 176
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + GE + VS PGTTL + + + +L DTPGL+ +
Sbjct: 177 NRLL----------GENRVTVSKY-----PGTTL-LSTFHEITGTKLRLIDTPGLIPGGR 220
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + E+Q + + E+ +T++++ + + L+++ V + +++AS +
Sbjct: 221 FSDLVIEEDQLKIIPSTEISRKTFKLEKNRCVVLGELIKLQVLNEEGQKPIFSLYASQGV 280
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
H +E A E+ L+ E GK+ +++F ++ ++ G
Sbjct: 281 QFHETNSEKASLQTERVHCLHLK---------EKGKFRKEKFTIAAGE------ELVWKG 325
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVF 541
L W SV+ +G + V EG DIV+R A + R F
Sbjct: 326 LAWLSVK-RGPLHIEVEYPEGGDIVIRKAFIHPRRVSF 362
>gi|313665313|ref|YP_004047184.1| ribosome biogenesis GTPase YqeH [Mycoplasma leachii PG50]
gi|392388747|ref|YP_005907156.1| hypothetical protein MLEA_002390 [Mycoplasma leachii 99/014/6]
gi|312949512|gb|ADR24108.1| ribosome biogenesis GTPase YqeH [Mycoplasma leachii PG50]
gi|339276392|emb|CBV66971.1| Putative uncharacterized protein [Mycoplasma leachii 99/014/6]
Length = 367
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/436 (20%), Positives = 172/436 (39%), Gaps = 90/436 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+Q TN GY N+SE +
Sbjct: 4 CLGCGSLLQTTNKLEQGY-------------------VNDSEHA---------------- 28
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
C RC +++Y ++ D + D +F + + + V V
Sbjct: 29 -----------YCLRCFKIKNYNQLVDSEIN----DKEFINKISTLIKENKNNNLVFYYV 73
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D D GS ++ ++ D +V+LVV KIDLLP S+ +
Sbjct: 74 LDIFDLFGSRILEIENLIKDF-----------------KVILVVNKIDLLPKSIKLEKIR 116
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+++ + + + ++ SA K ++ L++ V+ + + IGA N GKS+L+
Sbjct: 117 NYINNIFKNSFLKNV-EIFLTSANKINLVEPLLNKVI--KNNKNQQYFIGASNVGKSSLI 173
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + E ++ + + TTL ++++ L +FD+ G+ N
Sbjct: 174 NKML-----------EINQLIPSIVVSKFFNTTLDFIKIQ--LDTNTTIFDSAGVSRKNS 220
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
I + + Q KE++ TY++ +SI +G+ D S+ + ++ + +
Sbjct: 221 IANLMNKRFQSYCYFKKEIQQFTYQLTNNNSIFFSGVCWFDYISSNNQKTSFHIYTNKEI 280
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH T+N + + L P I ++ ++ + H++ W DI+ +G
Sbjct: 281 NLHRTNTKNVIRYWNNN-RKNLIPYINNSEKIQVYEFKFTKEHLNN--W----YDISISG 333
Query: 504 LGWFSVRLKGEAALGV 519
LGW + +++ E + +
Sbjct: 334 LGWINFKVETEMIIKI 349
>gi|223986364|ref|ZP_03636371.1| hypothetical protein HOLDEFILI_03682 [Holdemania filiformis DSM
12042]
gi|223961655|gb|EEF66160.1| hypothetical protein HOLDEFILI_03682 [Holdemania filiformis DSM
12042]
Length = 353
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 151/359 (42%), Gaps = 62/359 (17%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
V+C RC L HY ++ E + PD R L +++L VVD DF+ S
Sbjct: 30 VLCQRCFRLTHYDDLQFSMREGIDPD--------RILAQIHAMDALILWVVDLFDFEASL 81
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ + + GK V++V TK DLLP ++ + +V R +E
Sbjct: 82 LEGMNRHLF------------GKD-----VIVVGTKRDLLPETVGSEKLAKFVYGRLKEL 124
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
GI K V+ G + ++ A K +V +G NAGKSTLLNA+
Sbjct: 125 GIH--VKGLVVTGKNIPGGPEEVLRAIEWA-KGKDVVVMGMANAGKSTLLNALMDK---- 177
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGI--VRVEGVLPAQAKLFDTPGLLHPNQITTRLTRE 391
LT + PGTTL + + GV ++DTPGL N + L E
Sbjct: 178 -----------PQLTSSRYPGTTLDFNPLDIHGV-----TVYDTPGLTPRNSMLLHLDEE 221
Query: 392 EQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTE 451
+ K V K +KP ++++ S + GL R+D+ E + + S L LH G+ +
Sbjct: 222 DLKTVLPAKAVKPVGFQLRGDQSFAVGGLCRIDL--LGCEHVSAVFYCSNLLELHRGRAD 279
Query: 452 NACTMVEKHFGRQLQP-PIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
A + ++H+G L+P P G E W G D+ G+GW S+
Sbjct: 280 KADELWDRHYGELLRPIPAGMPYAE----WTSTVLTPLG-----VKEDVVIPGVGWMSL 329
>gi|407417084|gb|EKF37934.1| hypothetical protein MOQ_001862 [Trypanosoma cruzi marinkellei]
Length = 925
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 133/541 (24%), Positives = 208/541 (38%), Gaps = 127/541 (23%)
Query: 83 VCPGCGVLMQDTNPKHPGY--------FIRPSQNLNKVRKSHLVHVANESEFSNSLKKGG 134
C GCG L+QD + GY +I Q KVR + + SE +K G
Sbjct: 300 CCKGCGALLQDKDENVFGYVRRGDIERYIVDRQAKAKVRAEYADRM---SELQAHWQKHG 356
Query: 135 LVVFE-------AENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVG 187
V E E + K KP VC RCHAL + G + + PDF
Sbjct: 357 RRVGEEWLDFMTQEEFDAFYKDKNKPFVCHRCHALENLGVEGRRQIWS-APDFT------ 409
Query: 188 RKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVV 247
KL + + VV++VVD ADF G+ + ++S + V++ V
Sbjct: 410 EKLRALREKKCVVVLVVDIADFPGTMVYDLPGLISMNND----------------VIIAV 453
Query: 248 TKIDL--------------LPSSLSPTRF-EHWVRQRAREDGISK--ITKLHFVSAVKNW 290
K+D + + L R+ WV A + G+ + I + +SA + W
Sbjct: 454 NKMDCVRNRSFNYSNKDRAIAARLVTERYVRRWVTGIALQFGLPRHQIKDVVPISAKRGW 513
Query: 291 GLKSLIDDVVDLAG-------KRGNVWAIGAQNAGKSTLLNAIA--------------KS 329
++ LI V + + K + +G N GKS+++NAIA K
Sbjct: 514 NVEKLIAAVEEASNLNLTRPIKPMPTYFVGVANVGKSSVINAIAHKLYVPVPPHPESRKV 573
Query: 330 VDAGRGGDGEE-------------------------KNIVSHLTEAPVPGTTL--GIVRV 362
+ DG E K LT + +PGTT+ VRV
Sbjct: 574 YYTRKAKDGTEAVFWRWYTPPNVNQAEMIDIPSRHDKKASKLLTVSSLPGTTVEANAVRV 633
Query: 363 ---EGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAG 419
+G A LFDTPGLL ++ LT + + I K P+ + + G+++ ++G
Sbjct: 634 SLTKGAPGDAAYLFDTPGLLPHWHHSSPLTLLQMRRTLIRKYRNPQCFILMPGNTLFLSG 693
Query: 420 LMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPP-----IGEKRV 474
L +DV + + + V+ S + + TE + + G+ L PP IG+ R+
Sbjct: 694 LAAIDVVKGTSRGMLFMVYTSQKVRNAIIATERSDEFWQDQLGKALDPPGSLEQIGDLRL 753
Query: 475 EELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
E ++ F D+ G+GW S + E D+VLR L
Sbjct: 754 TESKCYL---FECYPRHRRRPKADVYVCGIGWTSFCVN----------ETCDVVLRVRTL 800
Query: 535 P 535
P
Sbjct: 801 P 801
>gi|82705979|ref|XP_727192.1| GTPase [Plasmodium yoelii yoelii 17XNL]
gi|23482916|gb|EAA18757.1| GTPase of unknown function, putative [Plasmodium yoelii yoelii]
Length = 831
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 144/301 (47%), Gaps = 20/301 (6%)
Query: 243 VVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWG---LKSLIDDV 299
++ +V KID LP S + + W R R+ + I L F+SA+K + L+ + +
Sbjct: 448 IIWLVNKIDCLPKSTNLDIIKIWFRNMIRQIKNTHINDLIFISALKCYNYNILEERMKNY 507
Query: 300 VDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGI 359
+D+ K +++ +G N GKS+ LN+ K ++ GD K +T + +P TTL
Sbjct: 508 IDI-DKGIDIYIVGCVNVGKSSFLNSFLKFINYKHIGDIYNKRKKGGVTVSNIPYTTLNY 566
Query: 360 VRVEGVLPAQAKLFDTPGLLHPNQITTRLTRE-EQKLVNINKELKPRTYRIKAGHSIHIA 418
+ L + DT G+ Q ++ L ++ + + INK+++P TY++K +SI +
Sbjct: 567 NVFK--LKKDINIIDTIGIPTKYQYSSILYKDIDLNSIIINKKIQPFTYKLKDDYSIILG 624
Query: 419 GLMRMDVEESSVESIY-----VTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKR 473
L +++ IY +T + S + +HM ++E +EK L PP
Sbjct: 625 SLCYINL-------IYGNFALLTFYISNKVTIHMCRSEKVENFLEKKKCSFLYPPHVYSD 677
Query: 474 VEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNAL 533
+ L +V+ V G ++S DI + L WFS+ +G ++ + + I R ++
Sbjct: 678 FDLLKPFVKHTVKVLGKDYESID-DIVISDLCWFSITGRGIKIFEIYAPKNIKIYRRPSM 736
Query: 534 L 534
+
Sbjct: 737 I 737
>gi|282851350|ref|ZP_06260715.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
gi|282557318|gb|EFB62915.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
Length = 213
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 25/231 (10%)
Query: 304 GKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVE 363
G++ +++ +G N GKSTL+NAI + + K+++ T + PGTTL +++
Sbjct: 8 GEKKDIYFVGTTNVGKSTLINAIINM-------NSDLKDVI---TTSKFPGTTLDEIKIP 57
Query: 364 GVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRM 423
L L DTPG+L+ NQ+ + L+ +E ++V K LKP TY++ G +I +AGL R
Sbjct: 58 --LSNGHYLIDTPGILNANQLASHLSGKELEVVEPKKPLKPATYQLLPGQTIFLAGLGRF 115
Query: 424 DVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRK 483
D + T++ + L +H KTENA T EKH L PP + + LG +
Sbjct: 116 DYVDGPSSGF--TIYVARDLYVHRTKTENADTFYEKHKDDLLLPP---SKDDCLGPLKGQ 170
Query: 484 EFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
F S DI G+G+ + + +T EG+ + +R AL+
Sbjct: 171 TFSPKEKS------DILFGGVGFITT--PANVVVKAYTPEGIGLGIRRALI 213
>gi|257125887|ref|YP_003164001.1| HSR1-like GTP-binding protein [Leptotrichia buccalis C-1013-b]
gi|257049826|gb|ACV39010.1| GTP-binding protein HSR1-related [Leptotrichia buccalis C-1013-b]
Length = 373
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 177/388 (45%), Gaps = 60/388 (15%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
++C RC +++YG ENL+ +F + + +++ + ++L + D DF+GSF
Sbjct: 35 LLCQRCFKIKNYG-------ENLVNNFSKEDYL-KEVNESVKKSDIILPIFDIIDFEGSF 86
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
++ + D R ++++ KIDLLP + PT +WV+ R E+
Sbjct: 87 TEEILDYLRDY-----------------RSIILINKIDLLPDFIHPTEISNWVKDRLAEE 129
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDL-AGKRGNVWAIGAQNAGKSTLLNAIAKSVDA 332
I + F+SA +G+ +I + ++ K+ +G N GKS+++N + +
Sbjct: 130 DIVP-DDIAFISAKNRYGVNGIIRKIKNIFQNKKVKATVLGVSNVGKSSVINLLLGN--- 185
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP-AQAKLFDTPGLLHPNQITTRLTRE 391
+ +T + GTTL + +P ++ + DTPGL+ +I+ ++ E
Sbjct: 186 ------------NKITTSKYSGTTLK--SINNRIPNSEITIIDTPGLIPDGRISDLISVE 231
Query: 392 EQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSV-----ESIYVTVWASPYLPLH 446
+ E+ +T++++ R + E+ + + I+ + +AS + H
Sbjct: 232 NGLKLVPAGEISRKTFKLEENQVFMFDVFCRFKILENELLKSGSKPIF-SAYASKSVKFH 290
Query: 447 MGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGW 506
+ + E T++ F L+ EK+ K+ + EF V+ + ++ AGLGW
Sbjct: 291 VAREERVETLLSGSFFEILEG--SEKK-----KYFQNEF-VTHEVEIEENEELVIAGLGW 342
Query: 507 FSVRLKGEAALGVWTYEGVDIVLRNALL 534
+V+ +G + + E V +V+R ++
Sbjct: 343 INVK-RGPLKIQLEVPEKVKVVIRPSIF 369
>gi|302767618|ref|XP_002967229.1| hypothetical protein SELMODRAFT_87746 [Selaginella moellendorffii]
gi|300165220|gb|EFJ31828.1| hypothetical protein SELMODRAFT_87746 [Selaginella moellendorffii]
Length = 599
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 119/499 (23%), Positives = 208/499 (41%), Gaps = 130/499 (26%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q T PGY E
Sbjct: 148 CYGCGAVLQYTQENSPGYI--------------------------------------NAE 169
Query: 144 TSEVKK--HE-KPVVCARCHALRH------------YGKVKD-VTVENLLPDFDFDHTVG 187
T E+KK H+ K V+C+RC + H YG+ K VT E L
Sbjct: 170 TYELKKKHHQLKSVLCSRCQLMCHGKLIPAVGGYGIYGREKGFVTAEELRA--------- 220
Query: 188 RKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVV 247
+L R +VL +VD DF GSF ++ +V GN P +VLV
Sbjct: 221 -QLAHIREERVLVLKLVDIVDFSGSFLTRIRDLV----------------GNNP-IVLVA 262
Query: 248 TKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG 307
TK+DLLP W+ + + ++ I+ +H SA G+ +++ ++ R
Sbjct: 263 TKVDLLPEGTDLAAVGDWIVESTQRKKLNVIS-VHLTSAKYFMGITNIVKEIHRERQGR- 320
Query: 308 NVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHL------TEAPVPGTTLGIVR 361
+V+ +GA N GKS ++++ K + A ++ ++ + ++ +PGTT+G +
Sbjct: 321 DVYILGAANVGKSAFISSLLKEMAA--------RDPIAAVARKRKPVQSVLPGTTVGPIS 372
Query: 362 VEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKA---------- 411
++ + ++DTPG+ ++I T ++ ++ L ++ + R Y I +
Sbjct: 373 IDA-FASGGSMYDTPGVHLHHRIETAISPDD--LPSLFPARRLRGYSIFSEALKQAEKDE 429
Query: 412 ---------GHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFG 462
G ++ G+ R+DV ++ ++ +T +AS L +H T A ++ G
Sbjct: 430 VISNVQDLTGTTMFWGGIARIDVLKAP-QNTRLTFYASAALRVHKVLTSEADEFYKRELG 488
Query: 463 RQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSV-DIAAAGLGWFSVR-LKGEAA---- 516
+ L PP E+ G R +F D+ V DIA +GLGW + L+ E+
Sbjct: 489 KTLVPPSDERASAWPGLDHRNKFTFDYD--DTRPVGDIAISGLGWMKMEFLQTESGVEDC 546
Query: 517 --LGVWTYEGVDIVLRNAL 533
L V+ G+++ R A+
Sbjct: 547 LELEVYVPRGIEVFRRPAI 565
>gi|302754142|ref|XP_002960495.1| hypothetical protein SELMODRAFT_164227 [Selaginella moellendorffii]
gi|300171434|gb|EFJ38034.1| hypothetical protein SELMODRAFT_164227 [Selaginella moellendorffii]
Length = 599
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 120/499 (24%), Positives = 208/499 (41%), Gaps = 130/499 (26%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q T PGY E
Sbjct: 148 CYGCGAVLQYTQENTPGYI--------------------------------------NAE 169
Query: 144 TSEVKK--HE-KPVVCARCHALRH------------YGKVKD-VTVENLLPDFDFDHTVG 187
T E+KK H+ K V+C+RC + H YG+ K VT E L
Sbjct: 170 TYELKKKHHQLKSVLCSRCQLMCHGKLIPAVGGYGIYGREKGFVTAEELRA--------- 220
Query: 188 RKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVV 247
+L R +VL +VD DF GSF +V +V GN P +VLV
Sbjct: 221 -QLAHIREERVLVLKLVDIVDFSGSFLTRVRDLV----------------GNNP-IVLVA 262
Query: 248 TKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG 307
TK+DLLP W+ + + ++ I+ +H SA G+ +++ ++ R
Sbjct: 263 TKVDLLPEGTDLAAVGDWIVESTQRKKLNVIS-VHLTSAKYFMGITNIVKEIHRERQGR- 320
Query: 308 NVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHL------TEAPVPGTTLGIVR 361
+V+ +GA N GKS ++++ K + A ++ ++ + ++ +PGTT+G +
Sbjct: 321 DVYILGAANVGKSAFISSLLKEMAA--------RDPIAAVARKRKPVQSVLPGTTVGPIS 372
Query: 362 VEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKA---------- 411
++ + ++DTPG+ ++I T ++ ++ L ++ + R Y I +
Sbjct: 373 IDA-FASGGSMYDTPGVHLHHRIETAISPDD--LPSLFPARRLRGYSIFSEALKQAEKDE 429
Query: 412 ---------GHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFG 462
G ++ G+ R+DV ++ ++ +T +AS L +H T A ++ G
Sbjct: 430 VISNVQDLTGTTMFWGGIARIDVLKAP-QNTRLTFYASAALRVHKVLTSEADEFYKRELG 488
Query: 463 RQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSV-DIAAAGLGWFSVR-LKGEAA---- 516
+ L PP E+ G R +F D+ V DIA +GLGW + L+ E+
Sbjct: 489 KTLVPPSDERASAWPGLDHRNKFTFDYD--DTRPVGDIAISGLGWMRMEFLQTESGVEDS 546
Query: 517 --LGVWTYEGVDIVLRNAL 533
L V+ G+++ R A+
Sbjct: 547 LELEVYVPRGIEVFRRPAI 565
>gi|407852124|gb|EKG05773.1| hypothetical protein TCSYLVIO_003151 [Trypanosoma cruzi]
Length = 917
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 131/541 (24%), Positives = 206/541 (38%), Gaps = 127/541 (23%)
Query: 83 VCPGCGVLMQDTNPKHPGY--------FIRPSQNLNKVRKSHLVHVANESEFSNSLKKGG 134
C GCG L+QD + GY +I Q K R + + SE +K G
Sbjct: 300 CCKGCGALLQDKDENVFGYVRRGDIERYILDRQAKMKARAEYADRM---SELQAHWQKHG 356
Query: 135 LVVFE-------AENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVG 187
V E E + K KP VC RCHAL + G + + PDF
Sbjct: 357 RRVGEEWLDFMTQEEFDAFYKDQNKPFVCHRCHALENLGVEGRRQIWS-APDFT------ 409
Query: 188 RKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVV 247
KL + + VV++VVD ADF G+ + ++S + V++ V
Sbjct: 410 EKLRALREKKCVVVLVVDIADFPGTMVYDLPGLISMNND----------------VIIAV 453
Query: 248 TKIDL--------------LPSSLSPTRF-EHWVRQRAREDGISK--ITKLHFVSAVKNW 290
K+D + + L R+ WV A + G+ + I + +SA + W
Sbjct: 454 NKMDCVRNRSFNYSNKDRAIAARLVTERYVRRWVTGIALQFGLPRHQIKDVIPISAKRGW 513
Query: 291 GLKSLIDDVVDLAG-------KRGNVWAIGAQNAGKSTLLNAIA--------------KS 329
+ LI V + + K + +G N GKS+++NAIA K
Sbjct: 514 NVDKLIAAVEEASNLNLTRPIKPMPTYFVGVANVGKSSVINAIAHKLYVPVPPHPESRKV 573
Query: 330 VDAGRGGDGEE-------------------------KNIVSHLTEAPVPGTTL--GIVRV 362
+ DG E K LT + +PGTT+ VRV
Sbjct: 574 YYTRKAKDGTEAVFWRWYTPPNVNQAEMIDIPSRHDKKASKLLTVSSLPGTTVEANAVRV 633
Query: 363 ---EGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAG 419
+G A LFDTPGLL ++ LT + + I K P+ + + G+++ ++G
Sbjct: 634 SLTKGAPGDAAYLFDTPGLLPHWHHSSPLTLLQMRRTLIRKYRNPQCFILMPGNTLFLSG 693
Query: 420 LMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPP-----IGEKRV 474
L +DV + + + V+ S + + TE + + G+ L PP +G+ R+
Sbjct: 694 LAAIDVVKGTSRGMLFMVYTSQKVCNAIIATERSDEFWQDQLGKALDPPGSLEQLGDLRL 753
Query: 475 EELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
E ++ F D+ G+GW S + E D+VLR L
Sbjct: 754 TESKCYL---FECYPRHRRRPKADVYVCGIGWTSFCVN----------ETCDVVLRVRTL 800
Query: 535 P 535
P
Sbjct: 801 P 801
>gi|262037918|ref|ZP_06011343.1| ribosome biogenesis GTPase YqeH [Leptotrichia goodfellowii F0264]
gi|261748061|gb|EEY35475.1| ribosome biogenesis GTPase YqeH [Leptotrichia goodfellowii F0264]
Length = 376
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 176/390 (45%), Gaps = 57/390 (14%)
Query: 151 EKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFD 210
E+ ++C RC+ +++YG+ + N L D+ V +++ ++L + D DF+
Sbjct: 32 EEDLLCQRCYKIKNYGQ----NIGNNLKKEDYSKEVA----NSAKKSDIILPIFDIIDFE 83
Query: 211 GSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRA 270
GSF ++ + D R ++++ KIDLLP + PT +WV++R
Sbjct: 84 GSFTEEILDYLRDY-----------------RSIILINKIDLLPDFVHPTEIANWVKERL 126
Query: 271 REDGISKITKLHFVSAVKNWGLKSLIDDVVDLA-GKRGNVWAIGAQNAGKSTLLNAIAKS 329
E+ I + F+SA +G+ +I + +L K+ +GA N GKS+++N +
Sbjct: 127 MEEDIIP-DDIGFLSAKSKYGVNGIIRKINNLFPDKKVRAVILGASNVGKSSVINLLL-- 183
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
G+ K +T + GTTL + + + DTPGL+ +I+ ++
Sbjct: 184 --------GKNK-----ITTSKYSGTTLKSIN-NKIPKTDIMIIDTPGLIPEGRISDLIS 229
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV--EESSVESIY---VTVWASPYLP 444
E + + E+ +T++ + R + E+S Y +V++S +
Sbjct: 230 VESGLKLVPSGEISRKTFKPEENRVFMFDAFCRFKILETENSDRGKYKPIFSVYSSKNVK 289
Query: 445 LHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGL 504
H+ K + +++ F ++ EE ++ +F V+ ++ + D+ AGL
Sbjct: 290 FHLTKEDRVEELLKGDFFELMKK-------EEKENYLENKF-VTYNTEIQENEDLVIAGL 341
Query: 505 GWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GW +V+ +G + + E +++R +L
Sbjct: 342 GWINVK-RGPLNIELTVPEYAKVIVRPSLF 370
>gi|342181471|emb|CCC90950.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 578
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 128/541 (23%), Positives = 206/541 (38%), Gaps = 119/541 (21%)
Query: 83 VCPGCGVLMQDTNPKHPGY--------FIRPSQNLNKVRKSHLVHVANESEFSNSLKKGG 134
C GCG L+QD + GY +I Q + R + + SE +K G
Sbjct: 31 CCRGCGALLQDQDEDSFGYVRKGDVERYIIERQQKMRARAEYADRM---SELQAHWEKHG 87
Query: 135 LVVFE-------AENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVG 187
V E E + + KP VC RCHAL + G + + PDF
Sbjct: 88 RQVGEEWLDFMTQEEFDAFYRDQNKPFVCHRCHALENLGVEGRRRIWS-APDFT------ 140
Query: 188 RKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVV 247
KL + + VV++VVD DF G+ + ++S + V++ V
Sbjct: 141 EKLRALREKKCVVVLVVDITDFPGTMVYDLPGLISMNND----------------VIIAV 184
Query: 248 TKIDL--------------LPSSLSPTRF-EHWVRQRAREDGISK--ITKLHFVSAVKNW 290
K+D + + L ++ WV A + G+ + I + +SA + W
Sbjct: 185 NKMDCVRNRSFSYSGKDRAIAACLVGEKYIRRWVTGIAVQFGLPRHQIRDVVPISAKRGW 244
Query: 291 GLKSLIDDVVDLAG-------KRGNVWAIGAQNAGKSTLLNAIA--------------KS 329
+++LI V + + K + +G N GKS+++NAIA K
Sbjct: 245 NIETLISAVEEASNLNLRRPTKPMPTYFVGVANVGKSSVINAIAHKLYVPLPPHPESRKV 304
Query: 330 VDAGRGGDGEE-------------------------KNIVSHLTEAPVPGTTLGIVR--- 361
R DG+E K LT + +PGTT+ V
Sbjct: 305 YYTKRAEDGKESVFWRWYTPPNVNQAEMIDIPSRHDKKASKLLTTSSLPGTTVDAVAVRV 364
Query: 362 --VEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAG 419
V G +A LFDTPGLL + LT + + I K P+ + + G+++ + G
Sbjct: 365 SLVRGSNKDRAYLFDTPGLLPHWHRHSPLTLLQMRRTLIRKFRNPQCFILVPGNTLLLGG 424
Query: 420 LMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPP-----IGEKRV 474
L +D+ + + + V+ S + + T+ + G+ L PP +G+ R+
Sbjct: 425 LCAIDIVKGTSRGMLFMVYTSQKVRNAIINTDQSDEFWSSQLGKALDPPGSLEQLGDLRL 484
Query: 475 EELGKWVRKEFHVSGSSWDSSSVDIAAAGLGW--FSVRLKGEAALGVWTYEGVDIVLRNA 532
E ++ F + DI GLGW F V + L V T GV +R
Sbjct: 485 TESKSYL---FECYKRNSRRPKADIYVCGLGWVAFCVNEPADVVLRVRTIPGVIHGIREP 541
Query: 533 L 533
L
Sbjct: 542 L 542
>gi|343475714|emb|CCD12971.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 920
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 128/541 (23%), Positives = 206/541 (38%), Gaps = 119/541 (21%)
Query: 83 VCPGCGVLMQDTNPKHPGY--------FIRPSQNLNKVRKSHLVHVANESEFSNSLKKGG 134
C GCG L+QD + GY +I Q + R + + SE +K G
Sbjct: 300 CCRGCGALLQDQDEDSFGYVRKGDVERYIIERQQKMRARAEYADRM---SELQAHWEKHG 356
Query: 135 LVVFE-------AENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVG 187
V E E + + KP VC RCHAL + G + + PDF
Sbjct: 357 RQVGEEWLDFMTQEEFDAFYRDQNKPFVCHRCHALENLGVEGRRRIWS-APDFT------ 409
Query: 188 RKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVV 247
KL + + VV++VVD DF G+ + ++S + V++ V
Sbjct: 410 EKLRALREKKCVVVLVVDITDFPGTMVYDLPGLISMNND----------------VIIAV 453
Query: 248 TKIDL--------------LPSSLSPTRF-EHWVRQRAREDGISK--ITKLHFVSAVKNW 290
K+D + + L ++ WV A + G+ + I + +SA + W
Sbjct: 454 NKMDCVRNRSFNYSGKDRAIAACLVGEKYIRRWVTGIAVQFGLPRHQIRDVVPISAKRGW 513
Query: 291 GLKSLIDDVVDLAG-------KRGNVWAIGAQNAGKSTLLNAIA--------------KS 329
+++LI V + + K + +G N GKS+++NAIA K
Sbjct: 514 NIETLISAVEEASNLNLRRPTKPMPTYFVGVANVGKSSVINAIAHKLYVPLPPHPESRKV 573
Query: 330 VDAGRGGDGEE-------------------------KNIVSHLTEAPVPGTTLGIVR--- 361
R DG+E K LT + +PGTT+ V
Sbjct: 574 YYTKRAEDGKESVFWRWYTPPNVNQAEMIDIPSRHDKKASKLLTTSSLPGTTVDAVAVRV 633
Query: 362 --VEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAG 419
V G +A LFDTPGLL + LT + + I K P+ + + G+++ + G
Sbjct: 634 SLVRGSNKDRAYLFDTPGLLPHWHRHSPLTLLQMRRTLIRKFRNPQCFILVPGNTLLLGG 693
Query: 420 LMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPP-----IGEKRV 474
L +D+ + + + V+ S + + T+ + G+ L PP +G+ R+
Sbjct: 694 LCAIDIVKGTSRGMLFMVYTSQKVRNAIINTDQSDEFWSSQLGKALDPPGSLEQLGDLRL 753
Query: 475 EELGKWVRKEFHVSGSSWDSSSVDIAAAGLGW--FSVRLKGEAALGVWTYEGVDIVLRNA 532
E ++ F + DI GLGW F V + L V T GV +R
Sbjct: 754 TESKSYL---FECYKRNSRRPKADIYVCGLGWVAFCVNEPADVVLRVRTIPGVIHGIREP 810
Query: 533 L 533
L
Sbjct: 811 L 811
>gi|256383799|gb|ACU78369.1| ribosome biogenesis GTPase YqeH [Mycoplasma mycoides subsp. capri
str. GM12]
gi|256384629|gb|ACU79198.1| ribosome biogenesis GTPase YqeH [Mycoplasma mycoides subsp. capri
str. GM12]
gi|296455327|gb|ADH21562.1| ribosome biogenesis GTPase YqeH [synthetic Mycoplasma mycoides
JCVI-syn1.0]
Length = 367
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/436 (20%), Positives = 170/436 (38%), Gaps = 90/436 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+Q N GY N++E +
Sbjct: 4 CLGCGSLLQTINKFEQGY-------------------VNDTEHA---------------- 28
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
C RC +++Y ++ D + D F + + + V V
Sbjct: 29 -----------YCLRCFKIKNYNQLVDSEIN----DQQFINKISALVNENKNNDLVFYYV 73
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D D GS ++ ++ D +V+LVV KIDLLP S+ +
Sbjct: 74 LDIFDLFGSRILEIESLIKDF-----------------KVILVVNKIDLLPKSIKLEKIR 116
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+++ + + + ++ SA K ++ L++ V+ + + IGA N GKS+L+
Sbjct: 117 NYINNVFKTSCLKNL-EIFLTSANKINLVEPLLNKVI--KNNKNQQYFIGASNVGKSSLI 173
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + E ++ + + TTL + ++ L +FD+ G+ N
Sbjct: 174 NKML-----------EINQLIPSIIVSKYFNTTLDFIEIQ--LDTNTTIFDSAGVSRKNS 220
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
I + + Q KE++ TY++ A +SI +G+ D SS + ++ + +
Sbjct: 221 IANLMNKRFQSYCYFKKEIQQFTYQLTANNSIFFSGVCWFDYLSSSSKKTNFHIYTNKEI 280
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH T+N + + L P I ++ ++ + H++ W DI+ +G
Sbjct: 281 NLHRTNTKNVIRYWNNN-RKNLIPYISNSEKIQVYEFKFTKEHLNN--W----YDISISG 333
Query: 504 LGWFSVRLKGEAALGV 519
LGW + +++ E + +
Sbjct: 334 LGWINFKVETEMIIKI 349
>gi|331703546|ref|YP_004400233.1| GTPase [Mycoplasma mycoides subsp. capri LC str. 95010]
gi|328802101|emb|CBW54255.1| Conserved hypothetical protein, probable GTPase [Mycoplasma
mycoides subsp. capri LC str. 95010]
Length = 367
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/436 (20%), Positives = 170/436 (38%), Gaps = 90/436 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+Q N GY N++E +
Sbjct: 4 CLGCGSLLQTINKFEQGY-------------------VNDTEHA---------------- 28
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
C RC +++Y ++ D + D F + + + V V
Sbjct: 29 -----------YCLRCFKIKNYNQLVDSEIN----DQQFINKISTLVNENKNNDLVFYYV 73
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D D GS ++ ++ D +V+LVV KIDLLP S+ +
Sbjct: 74 LDIFDLFGSRILEIENLIKDF-----------------KVILVVNKIDLLPKSIKLEKIR 116
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+++ + + + ++ SA K ++ L++ V+ + + IGA N GKS+L+
Sbjct: 117 NYINNVFKTSCLKNL-EIFLTSANKINLVEPLLNKVI--KNNKNQQYFIGASNVGKSSLI 173
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + E ++ + + TTL + ++ L A +FD+ G+ N
Sbjct: 174 NKML-----------EINQLIPSIVVSKFFNTTLDFIEIQ--LDANTTIFDSAGVSRKNS 220
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
I + + Q KE++ TY++ +SI +G+ D SS + ++ + +
Sbjct: 221 IANLMNKRFQSYCYFKKEIQQFTYQLTPNNSIFFSGVCWFDYLSSSNQKTNFHIYTNKEI 280
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH T+N + + L P I ++ ++ + H++ W DI+ +G
Sbjct: 281 NLHRTNTKNVIRYWNNN-RKNLIPYINNSDKIQVYEFKFTKEHLNN--W----YDISISG 333
Query: 504 LGWFSVRLKGEAALGV 519
LGW + +++ E + +
Sbjct: 334 LGWINFKVETEMIIKI 349
>gi|71666593|ref|XP_820254.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70885591|gb|EAN98403.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 917
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 131/541 (24%), Positives = 206/541 (38%), Gaps = 127/541 (23%)
Query: 83 VCPGCGVLMQDTNPKHPGY--------FIRPSQNLNKVRKSHLVHVANESEFSNSLKKGG 134
C GCG L+QD + GY +I Q K R + + SE +K G
Sbjct: 300 CCKGCGALLQDKDENVFGYVRRGDIERYIVDRQAKMKARAEYADRM---SELQVHWQKHG 356
Query: 135 LVVFE-------AENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVG 187
V E E + K KP VC RCHAL + G + + PDF
Sbjct: 357 RRVGEEWLDFMTQEEFDAFYKDQNKPFVCHRCHALENLGVEGRRQIWS-APDFT------ 409
Query: 188 RKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVV 247
KL + + VV++VVD ADF G+ + ++S + V++ V
Sbjct: 410 EKLRALREKKCVVVLVVDIADFPGTMVYDLPGLISMNND----------------VIIAV 453
Query: 248 TKIDL--------------LPSSLSPTRF-EHWVRQRAREDGISK--ITKLHFVSAVKNW 290
K+D + + L R+ WV A + G+ + I + +SA + W
Sbjct: 454 NKMDCVRNRSFNYSNKDRAIAARLVTERYVRRWVIGIALQFGLPRHQIKDVVPISAKRGW 513
Query: 291 GLKSLIDDVVDLAG-------KRGNVWAIGAQNAGKSTLLNAIA--------------KS 329
+ LI V + + K + +G N GKS+++NAIA K
Sbjct: 514 NVDKLIAAVEEASNLNLTRPIKPMPTYFVGVANVGKSSVINAIAHKLYVPVPPHPESRKV 573
Query: 330 VDAGRGGDGEE-------------------------KNIVSHLTEAPVPGTTL--GIVRV 362
+ DG E K LT + +PGTT+ VRV
Sbjct: 574 YYTRKAKDGTEAVFWRWYTPPNVNQAEMIDIPSRHDKKASKLLTVSSLPGTTVEANAVRV 633
Query: 363 ---EGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAG 419
+G A LFDTPGLL ++ LT + + I K P+ + + G+++ ++G
Sbjct: 634 SLTKGAPGDAAYLFDTPGLLPHWHHSSPLTLLQMRRTLIRKYRNPQCFILMPGNTLFLSG 693
Query: 420 LMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPP-----IGEKRV 474
L +DV + + + V+ S + + TE + + G+ L PP +G+ R+
Sbjct: 694 LAAIDVVKGTSRGMLFMVYTSQKVCNAIIATERSDEFWQDQLGKALDPPGSLEQLGDLRL 753
Query: 475 EELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
E ++ F D+ G+GW S + E D+VLR L
Sbjct: 754 TESKCYL---FECYPRHRRRPKADVYVCGIGWTSFCVN----------ETCDVVLRVRTL 800
Query: 535 P 535
P
Sbjct: 801 P 801
>gi|419524131|ref|ZP_14063706.1| GTPase family protein [Streptococcus pneumoniae GA13723]
gi|379556539|gb|EHZ21594.1| GTPase family protein [Streptococcus pneumoniae GA13723]
Length = 196
Score = 96.3 bits (238), Expect = 4e-17, Method: Composition-based stats.
Identities = 65/210 (30%), Positives = 109/210 (51%), Gaps = 17/210 (8%)
Query: 268 QRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIA 327
+RA E+G+ + + SA + +K +ID + R +V+ +G N GKSTL+NAI
Sbjct: 2 KRAHEEGLRPVDVV-LTSAQNKYAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAII 59
Query: 328 KSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR 387
+ + ++N++ T + PGTTL ++E L + ++DTPG++H +Q+
Sbjct: 60 QEITG-------DQNVI---TTSRFPGTTLD--KIEIPLDDGSYIYDTPGIIHRHQMAHY 107
Query: 388 LTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHM 447
LT + K V+ KE+KP+TY++ ++ + GL R D + T + L LH
Sbjct: 108 LTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHR 165
Query: 448 GKTENACTMVEKHFGRQLQPPIG-EKRVEE 476
K E A +KH G L PP EK++ +
Sbjct: 166 SKLEGASAFYDKHLGTLLTPPNSKEKKISQ 195
>gi|110004623|emb|CAK98959.1| conserved hypothetical gtp binding protein [Spiroplasma citri]
Length = 358
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 176/452 (38%), Gaps = 101/452 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV++QDT P GY +Q+
Sbjct: 7 CSGCGVVLQDTTPNDLGYVETLTQD----------------------------------- 31
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
C RC L HY ++ V P DF KL V
Sbjct: 32 -----------YCYRCFRLTHYNELVTYNV----PAIDF----LAKLRQDYHLSWHYFYV 72
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D D DG+ + +++ + +V L++ KIDL+ ++P +
Sbjct: 73 LDVYDLDGTRELALEQLLQNN-----------------KVTLIINKIDLVNKLINPHKII 115
Query: 264 HWVRQRAREDGI-SKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
++ + R + SK+ + VS +KN+GL L + + ++ +G+ N GKSTL
Sbjct: 116 TYITELFRTSVLFSKLEDIILVSGLKNYGLDELWRYI---KRQTNDIVFVGSSNTGKSTL 172
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
LN++ K + + +T + TTLG + V L + K++DTPG+++ +
Sbjct: 173 LNSLIKLTNQQQK-----------ITVSNNLATTLGKIVVN--LGTRHKVYDTPGIMNKH 219
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
+ + L + ++ + LKP T+++ +I GL S + + +
Sbjct: 220 SLLSYLAENNKNMIT-KQLLKPMTFQLNLEQTIFYEGLASFSYLTGLKTSFH--FYKNNN 276
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K N + +F L +++ +W + ++ + + + A
Sbjct: 277 LKLHRTKLSNK----DYYFTHHLST--AAVKLKNYQEWTERVIEIN----EPGNYSLFIA 326
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW S + + + V T++ + I LR +
Sbjct: 327 GLGWISFKGQSGQKIMVGTHQNIKITLRKQFI 358
>gi|320528085|ref|ZP_08029250.1| ribosome biogenesis GTPase YqeH [Solobacterium moorei F0204]
gi|320131433|gb|EFW23998.1| ribosome biogenesis GTPase YqeH [Solobacterium moorei F0204]
Length = 349
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 183/457 (40%), Gaps = 111/457 (24%)
Query: 81 LTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEA 140
+TVC GCG ++Q T+ K GY + ++E+
Sbjct: 1 MTVCKGCGAVLQTTDSKAIGYSPKA-----------------DAEY-------------- 29
Query: 141 ENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVV 200
C RC L HY D+T+ ++ D D + R + +++
Sbjct: 30 ---------------CQRCFRLIHY---DDLTI-SMKTGIDPDAVIDR----IAKMDALI 66
Query: 201 LMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPT 260
L V+D DF+ + + ++D +V++ TK DLLP+S
Sbjct: 67 LWVIDLYDFEAGIINGINRKLAD-----------------KDIVMIATKRDLLPASCGEE 109
Query: 261 RFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKS 320
+ H+V R ++ GI +I +L S + G++ + + V +LA R + +G N+GKS
Sbjct: 110 KIAHFVFGRLKDLGI-RIERLILASKEEKMGVEEIKECVDELANGR-QIVVMGKANSGKS 167
Query: 321 TLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLH 380
TL+N + + LT + PGTTL +E DTPG+
Sbjct: 168 TLINNLMST---------------RVLTASRYPGTTLDFNELE---IDGHTYIDTPGIEI 209
Query: 381 PNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVW-A 439
N + ++ + K + +K +KP+ ++++ S + GL R+D+ S VW
Sbjct: 210 GNSMLMEVSEADLKTIMPSKNIKPQVFQLRGEQSFFVGGLARLDLSGCKHAS---CVWYL 266
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKW-VRKEFHVSGSSWDSSSVD 498
S L +H A H G P E E+ K+ +RK D VD
Sbjct: 267 SDRLNVHRTNGNYADEKWNTHVGTLFVPTAIEA---EMKKYTIRK---------DMPKVD 314
Query: 499 IAAAGLGWFSVRLKGEAA-LGVWTYEGVDIVLRNALL 534
+ GLGW V GE + + V + V + R A+L
Sbjct: 315 VVIDGLGWACV--SGEVSTITVHVPKSVSVTFRKAML 349
>gi|401406986|ref|XP_003882942.1| hypothetical protein NCLIV_026980 [Neospora caninum Liverpool]
gi|325117358|emb|CBZ52910.1| hypothetical protein NCLIV_026980 [Neospora caninum Liverpool]
Length = 895
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 199/478 (41%), Gaps = 76/478 (15%)
Query: 151 EKPVVCARCHALRHYGKVKDVTVENLLPDFDF-DHTV-----GRKLMSASGARSVVLMVV 204
+K V+C RCHA++ K+ E L F DH + R + S R + L+ +
Sbjct: 433 QKLVLCQRCHAMKSGKKID----EGLRVGFSHGDHLLHPDRFKRLVASLRTKRCIFLLFL 488
Query: 205 DAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSL------- 257
D ++ + D N V + VTK DLLP SL
Sbjct: 489 DL------ISPELVPALPDLVRVNP-------------VYVAVTKCDLLPGSLRRPDAPF 529
Query: 258 --SPTRFE-----------HWVRQ---RAREDGISKITKLHFVSAVKNWGLKSLIDDVVD 301
S F H+V + RA + + +S G+ LI+ V
Sbjct: 530 NSSAEGFRRRCIANTNVARHYVFEMLSRAYRLKDFTVKNIFMISNKSGAGVSHLINAVGQ 589
Query: 302 LAGKRGN-VWAIGAQNAGKSTLLNAI-AKSVDAGRGGDGE------EKNIVSHLTEAPVP 353
A +R V+ IGA NAGKS+ LN I AK+ G + + + VP
Sbjct: 590 EAIRRKRPVYVIGAANAGKSSFLNKILAKATREPESTPGPLQKPQLKGAKAAAAASSAVP 649
Query: 354 GTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGH 413
GTTL + + V+ + K+ DTPG+ LT+EE + + L + R+ GH
Sbjct: 650 GTTLDFIPL--VVNGKWKVIDTPGIFLKGSYANLLTQEELQAAVPSSALHLCSARVAEGH 707
Query: 414 SIHIAGLMRMDVEESSVESIYVTVWASPYL---PLHMGKTENACTMVEKHFGRQLQPPIG 470
+ + GL R VE + + + S L P T ++ +L PP
Sbjct: 708 GVWLGGLAR--VELLGDRGCFFSFFLSRSLLIRPFTAAGTPEGKLEAQRS---RLSPPFS 762
Query: 471 EKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLR 530
+R + L V ++F+++G W ++ DI +GLGW S+ G + V + V + R
Sbjct: 763 PERRKALSPLVPEDFYIAGKGWQEAAADIVLSGLGWISITGCGPLRVRVHVPDEVRVYQR 822
Query: 531 NALLPYRSQVFEVAGFTVSKIISKAD-QSLNKSKRLNEAKRKPR-EPEGTIHPKSSLS 586
AL+P ++ T+ + AD Q+++K + ++A R PR +PE H KS +S
Sbjct: 823 PALVPRATRACPAVATTL--LQKTADRQAVHKMQ--SQAHRSPRGDPERRHHMKSDIS 876
>gi|239616645|ref|YP_002939967.1| GTP-binding protein HSR1-related [Kosmotoga olearia TBF 19.5.1]
gi|239505476|gb|ACR78963.1| GTP-binding protein HSR1-related [Kosmotoga olearia TBF 19.5.1]
Length = 368
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 184/456 (40%), Gaps = 95/456 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q N PGY P+ L + +K
Sbjct: 3 CKGCGVEIQTFNDDVPGYI--PADVLERRQKEG--------------------------- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
K ++C RC L+HYGK K D ++ + L A V+ V
Sbjct: 34 --------KEILCQRCFHLKHYGKFKKEKKGVKSLD-----SLKKYLHLAKN----VIYV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D DFDG++ ++ +++ E N V V+ K+DL+P ++P +
Sbjct: 77 IDIFDFDGTYREEIVELLK---EHN--------------VYYVINKVDLVPKEVAPPEIK 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W R R + + T++ +SA G+ + + +R V +G N GKS++L
Sbjct: 120 KWARDRLK----VQSTRVKLLSAKVGRGVSGFVKFLKSKKDRRFLV--VGVTNVGKSSVL 173
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
NA+ G+G+ LT + PGTTL +V+++ L DTPG+ ++
Sbjct: 174 NALT--------GEGQ-------LTASKYPGTTLELVQLKNE-DTGLTLIDTPGIFTNDR 217
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVE-ESSVESIYVTVWASPY 442
+T L Q + K+L T K ++ + + + V+ S + S
Sbjct: 218 VTDLLDPWCQAKIMPQKKLTVTTINAKKDRTVFFSSFVSITVKGYKGRRSPIFHILTSEN 277
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
+ +H E A + FGR L PP G + K+ + + +I
Sbjct: 278 VVVHETNPEKAEERWSEWFGRFLVPPCGNSGFDNY-KFENHQLRLEAGQ------EIHIC 330
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL-PYR 537
GLGW +V +G A + E V V+R+AL+ PY+
Sbjct: 331 GLGWVNVA-RGPAEFTLKLPESVKWVVRDALIGPYK 365
>gi|156085495|ref|XP_001610157.1| membrane protein [Babesia bovis T2Bo]
gi|154797409|gb|EDO06589.1| membrane protein, putative [Babesia bovis]
Length = 677
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 120/514 (23%), Positives = 218/514 (42%), Gaps = 107/514 (20%)
Query: 74 YDEATPKLTVCPGCGVLMQDTNPKHPGYF-------IRPSQNLNKVRKSHLVHVANESEF 126
+D AT T C GCG+ +Q N + PGY IR S + R+ +++ F
Sbjct: 215 FDIATDAST-CIGCGIRLQSGNLQSPGYIDPLVMASIRESGGHARCRRCS--SMSSGLIF 271
Query: 127 SNSLKKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTV 186
+NS G +A ET +
Sbjct: 272 NNSDIAVGADATDAARETVAII-------------------------------------- 293
Query: 187 GRKLMSASGARSV-VLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVL 245
R +S + R+V V+ ++DA D F +A++++ + RA + S +
Sbjct: 294 -RNALSLNATRNVTVVYMLDALDI--HFEDGLAELIA-----SRRAQRTSDS----HFYI 341
Query: 246 VVTKIDLLP--SSLSPTRFEH-WVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDL 302
V+ K+DLLP S + H +V+ RA + G+ K + +S+ G+ + ++D
Sbjct: 342 VLNKVDLLPPHSRKRLIAYVHRYVKSRAPDLGL-KPRHIFLLSSRTGSGVNLFLSVLLDD 400
Query: 303 A-GKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSH----LTEAPVPGTTL 357
A +R ++ +GA N GKST +N ++ V D + +I + L+ + VPGTTL
Sbjct: 401 AYRRRSKIFFVGATNTGKSTFINRLSNLVSCS---DERKSDIAASKRALLSTSVVPGTTL 457
Query: 358 GIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHI 417
+R++ +++DTPG++ PN T+ LT +E K+ + R+ G S+ I
Sbjct: 458 RPLRID--TGPGFEMYDTPGIVVPNAFTSYLTPDELKMAVPASLGAAKPLRVACGSSLLI 515
Query: 418 AGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEK--------HFGRQLQPPI 469
+R+DV + + T + S + + + +T + K +G + + I
Sbjct: 516 GPFVRIDVTKG--RPWFFTPYFSKRVKVAVVRTNRIAQFLSKSPFGDARIFYGTECEDGI 573
Query: 470 --------------GEKRVEELGKWV--------RKEFHVSGSSWDSSSVDIAAAGLGWF 507
E V+++ K V R + +V GS WD ++ D+ GLG+
Sbjct: 574 LTSDESNTSDREGPLEGSVDDIRKHVLPNRVDTTRHQVNVVGSGWDHATSDLCFKGLGFI 633
Query: 508 SVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVF 541
++ E ++ + T GV + +R L+P+ + F
Sbjct: 634 ALAGALELSICIETCSGVGVYMREPLMPFDAIPF 667
>gi|259481754|tpe|CBF75572.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 634
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 189/435 (43%), Gaps = 86/435 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
CPGCG Q P PG++ S+ + RK L+ A + S + + +
Sbjct: 69 CCPGCGAYSQTVEPNEPGFY---SKTRKQTRK--LLLEAQKEPLKESATQEAVFTVQKAV 123
Query: 143 ETSEV-------------KKHEKPV-VCARCHALRHYGKVKDVTVENLLPDFDFDHTVGR 188
E +E+ +K + PV VC RCH L H+ K V + P H++G
Sbjct: 124 EEAEIAPKPHPDTVSQYLEKSQSPVQVCDRCHDLLHHNK----GVSAISPSI---HSIGA 176
Query: 189 KLMSASGARSVVLMVVDAADFDGSFPRKVAKM--VSDTAEENERA----WKEGKSGNVPR 242
L + + + ++DAADF S + + + + N R+ +K GK +P
Sbjct: 177 YLDESPHKHNRIYHIIDAADFPMSLVDGIYEELGIQEQRSRNRRSATYKYKHGK--KLPT 234
Query: 243 VVLVVTKIDLLPSS--LSPTRFEHWVRQRARED-GIS----KITKLHFVSAVKNWGLKSL 295
+ V+T+ DLL + L ++ E +VR RE GIS ++ +H +SA + W K +
Sbjct: 235 ITFVITRSDLLGPTKELVDSKME-FVRSVLREKLGISSEEFRLGNVHMISAHRGWWTKKV 293
Query: 296 IDDVVDLAGKRGNVWAIGAQNAGKSTLLNA---------------IAKSVDAGRGGDGEE 340
+++ + G +W +G NAGKS+ + A IA+ +A ++
Sbjct: 294 KEEMREHG---GGIWIVGKANAGKSSFVQACIPKDSRNLEKMAELIARRGEASPAPSLDD 350
Query: 341 KNIV---SHLTEAP-------------VPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQI 384
+ S L AP +PGTT+ +R+ + ++ D PGL +
Sbjct: 351 QPAFDPDSLLPPAPNEDLYPVLPIVSSLPGTTVSPIRIP-FGRGKGEIIDLPGLSR-GDL 408
Query: 385 TTRLTREEQKLVNINKELKPRTYRIKAGHSIHI-AGLMRMDVEESSVESIYVTVWASPYL 443
+ E ++ + + K KP + IK G S+ I GL+R+ + + V A+ ++
Sbjct: 409 ADYVQDEYKRDLIMTKRGKPERHTIKPGQSLLIGGGLIRI-----TPLDLDTIVLAAAFI 463
Query: 444 PL--HMGKTENACTM 456
P+ H+ +T+ A M
Sbjct: 464 PIETHLTRTDKAAEM 478
>gi|67526495|ref|XP_661309.1| hypothetical protein AN3705.2 [Aspergillus nidulans FGSC A4]
gi|40740723|gb|EAA59913.1| hypothetical protein AN3705.2 [Aspergillus nidulans FGSC A4]
Length = 990
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 189/435 (43%), Gaps = 86/435 (19%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
CPGCG Q P PG++ S+ + RK L+ A + S + + +
Sbjct: 425 CCPGCGAYSQTVEPNEPGFY---SKTRKQTRK--LLLEAQKEPLKESATQEAVFTVQKAV 479
Query: 143 ETSEV-------------KKHEKPV-VCARCHALRHYGKVKDVTVENLLPDFDFDHTVGR 188
E +E+ +K + PV VC RCH L H+ K V + P H++G
Sbjct: 480 EEAEIAPKPHPDTVSQYLEKSQSPVQVCDRCHDLLHHNK----GVSAISPSI---HSIGA 532
Query: 189 KLMSASGARSVVLMVVDAADFDGSFPRKVAKM--VSDTAEENERA----WKEGKSGNVPR 242
L + + + ++DAADF S + + + + N R+ +K GK +P
Sbjct: 533 YLDESPHKHNRIYHIIDAADFPMSLVDGIYEELGIQEQRSRNRRSATYKYKHGK--KLPT 590
Query: 243 VVLVVTKIDLLPSS--LSPTRFEHWVRQRARED-GIS----KITKLHFVSAVKNWGLKSL 295
+ V+T+ DLL + L ++ E +VR RE GIS ++ +H +SA + W K +
Sbjct: 591 ITFVITRSDLLGPTKELVDSKME-FVRSVLREKLGISSEEFRLGNVHMISAHRGWWTKKV 649
Query: 296 IDDVVDLAGKRGNVWAIGAQNAGKSTLLNA---------------IAKSVDAGRGGDGEE 340
+++ + G +W +G NAGKS+ + A IA+ +A ++
Sbjct: 650 KEEMREHG---GGIWIVGKANAGKSSFVQACIPKDSRNLEKMAELIARRGEASPAPSLDD 706
Query: 341 KNIV---SHLTEAP-------------VPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQI 384
+ S L AP +PGTT+ +R+ + ++ D PGL +
Sbjct: 707 QPAFDPDSLLPPAPNEDLYPVLPIVSSLPGTTVSPIRIP-FGRGKGEIIDLPGLSR-GDL 764
Query: 385 TTRLTREEQKLVNINKELKPRTYRIKAGHSIHI-AGLMRMDVEESSVESIYVTVWASPYL 443
+ E ++ + + K KP + IK G S+ I GL+R+ + + V A+ ++
Sbjct: 765 ADYVQDEYKRDLIMTKRGKPERHTIKPGQSLLIGGGLIRI-----TPLDLDTIVLAAAFI 819
Query: 444 PL--HMGKTENACTM 456
P+ H+ +T+ A M
Sbjct: 820 PIETHLTRTDKAAEM 834
>gi|315917028|ref|ZP_07913268.1| GTP-binding protein [Fusobacterium gonidiaformans ATCC 25563]
gi|313690903|gb|EFS27738.1| GTP-binding protein [Fusobacterium gonidiaformans ATCC 25563]
Length = 362
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/458 (20%), Positives = 179/458 (39%), Gaps = 100/458 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ +Q+T+ K GY +++N
Sbjct: 5 CIGCGIPLQNTDSKKDGY---TPKDING-------------------------------- 29
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
++ + C RC + HYG+ + L D+ ++L + + L V
Sbjct: 30 -------KEELYCQRCFRVSHYGE----HSSSFLSREDYQ----KELQQWVSPKRLALAV 74
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
D DF+GSF + ++ + ++V+ K+DL+P P+
Sbjct: 75 FDIIDFEGSFQDDILDILREMDS-----------------IVVINKVDLIPGEKHPSEVA 117
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+WV+ R +GIS + + VS N+G+ ++ + V +G N GKS+++
Sbjct: 118 NWVKGRLASEGISPLD-IAIVSCKNNYGMNGVLRKIQHFYPNGVEVLVLGVTNVGKSSVI 176
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + + +T + PGTTL + + +L + L DTPGL+ +
Sbjct: 177 NRLLGK---------------NRVTVSKYPGTTL-LSTMNEILGTKLCLIDTPGLIPEGR 220
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + E+Q V + E+ +T++++ I + +++ V + +++AS +
Sbjct: 221 FSDLMIEEDQLRVIPSTEISRKTFKLEKDRCIVLGEFVKLRVLNEEEQRPIFSLYASQGV 280
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
H E A E L+ K+ ++ F ++ ++ G
Sbjct: 281 QFHETSLEKASLQKENENCLHLKKK---------QKFCKEIFTIAAGE------ELVWKG 325
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVF 541
W SV+ +G + V EG DIV+R A + R F
Sbjct: 326 FAWLSVK-RGPLHIEVEYPEGGDIVIRKAFIHPRRVSF 362
>gi|339498294|ref|ZP_08659270.1| GTPase YqeH [Leuconostoc pseudomesenteroides KCTC 3652]
Length = 209
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 110/235 (46%), Gaps = 31/235 (13%)
Query: 298 DVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTL 357
D +D +V+ +G N GKSTL+N I KS I + +T + PGTTL
Sbjct: 2 DTIDNFRDGRDVFVVGVTNVGKSTLINQIIKS----------RTGIQNLITTSRFPGTTL 51
Query: 358 GIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHI 417
R+E L +L DTPG++ +Q+ LT ++ K E+KPRTY++ +I I
Sbjct: 52 D--RIEIPLEDGQQLIDTPGIIKRDQMAHVLTDKDLKFALPKNEIKPRTYQLNPEQTIFI 109
Query: 418 AGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEEL 477
GL R D + +I T + L LH K A E+H G L P +L
Sbjct: 110 GGLARFDFISGARSAI--TAYFENNLNLHRTKLIGADDFYEQHAGGLLVPA-----PSQL 162
Query: 478 GKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGV--WTYEGVDIVLR 530
++ EF ++ S DI +GLGW SV A + V W +GV +++R
Sbjct: 163 QNLIKHEFSITEDS------DIVFSGLGWISV----PAGIKVAGWAPKGVSVLIR 207
>gi|343525560|ref|ZP_08762515.1| ferrous iron transport protein B-like protein [Streptococcus
constellatus subsp. pharyngis SK1060 = CCUG 46377]
gi|343395830|gb|EGV08368.1| ferrous iron transport protein B-like protein [Streptococcus
constellatus subsp. pharyngis SK1060 = CCUG 46377]
Length = 197
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 16/201 (7%)
Query: 268 QRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIA 327
+RA E+G+ + + SA +K LI+ + R +V+ +G N GKSTL+NAI
Sbjct: 3 ERAHEEGLRPVDVV-LTSAQNKQAIKELIEKIEQYRKGR-DVYVVGVTNVGKSTLINAII 60
Query: 328 KSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR 387
+ + +K+I+ T + PGTTL ++E L + ++DTPG++H +Q+
Sbjct: 61 QEITG-------DKDII---TTSRFPGTTLD--KIEIPLVDGSHIYDTPGIIHRHQMAHY 108
Query: 388 LTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHM 447
L+ + K V+ KE+KP+TY++ ++ + GL R D + + T + L LH
Sbjct: 109 LSAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFVSGNKQGF--TAYFDNELQLHR 166
Query: 448 GKTENACTMVEKHFGRQLQPP 468
K A EKH G L PP
Sbjct: 167 TKLAGAGEFYEKHVGSLLTPP 187
>gi|42561081|ref|NP_975532.1| GTPase [Mycoplasma mycoides subsp. mycoides SC str. PG1]
gi|42492578|emb|CAE77174.1| Conserved hypothetical GTPase of unknown function [Mycoplasma
mycoides subsp. mycoides SC str. PG1]
gi|301320975|gb|ADK69618.1| ribosome biogenesis GTPase YqeH [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 367
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/436 (20%), Positives = 170/436 (38%), Gaps = 90/436 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+Q N GY N++E +
Sbjct: 4 CLGCGSLLQTINKFEQGY-------------------VNDTEHA---------------- 28
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
C RC +++Y ++ D + D F + + + V V
Sbjct: 29 -----------YCLRCFKIKNYNQLVDSEIN----DQQFINKISTLVNENKNNGLVFYYV 73
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D D GS ++ ++ D +V+LVV KIDLLP S+ +
Sbjct: 74 LDIFDLFGSRILEIENLIKDF-----------------KVILVVNKIDLLPKSIKLEKIR 116
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+++ + G K ++ SA + ++ L++ V+ + + IGA N GKS+L+
Sbjct: 117 NYINNVFKT-GCLKNLEIFLTSADRINLVEPLLNKVI--KNNKNQQYFIGASNVGKSSLI 173
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + E ++ + + TTL + ++ L +FD+ G+ N
Sbjct: 174 NKML-----------EINQLIPSIVVSKYFNTTLDFIEIQ--LDTNTTIFDSAGVSRKNS 220
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
I + + Q KE++ TY++ +SI +G+ D SS + ++ + +
Sbjct: 221 IANLMNKRFQSYCYFKKEIQQFTYQLTPNNSIFFSGVCWFDYLSSSNQKTNFHIYTNKEI 280
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH T+N + + L P I ++ ++ + H+ ++W DI+ +G
Sbjct: 281 NLHRTNTKNVIRYWNNN-RKNLIPYINNSEKIQVYEFKFTKEHL--NNW----YDISISG 333
Query: 504 LGWFSVRLKGEAALGV 519
LGW + +++ E + +
Sbjct: 334 LGWINFKVETEMIIKI 349
>gi|399219162|emb|CCF76049.1| unnamed protein product [Babesia microti strain RI]
Length = 569
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 209/492 (42%), Gaps = 73/492 (14%)
Query: 84 CPGCGVLMQDTNPKHPGYFIR------PSQNLNKVRKSHLVHVANESEFSNSLKKGGLVV 137
CPGCG+ Q + PGY SQN+ + L F KGG V+
Sbjct: 105 CPGCGISFQSKDVFLPGYIDTHEFDKFKSQNIEDPKLKLLPLCMRCKGF-----KGGNVL 159
Query: 138 FEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHT-VGRKLMSASGA 196
+ ++ ++E K+ K D+ + N D + V + +
Sbjct: 160 NDGKHLSNEYKETNKR---------------NDLAIGNTAIDASNETAFVLHNTLKKNYH 204
Query: 197 RSV-VLMVVDAADFDGSFPRKVAKMVSDTAEENERAWK----EGKSGNVPRVVLVVTKID 251
R V ++ ++DA D ++V V + E + K + + +VV KID
Sbjct: 205 RHVSIVYIMDALDL--YLDKRVVDFVVNRRREISKRVKMSDGDQTLSKLTLFYIVVNKID 262
Query: 252 LLPSSLSPTRFEHWVRQRA----REDGISKITKLHFVSAVKNWGLKSLIDDVVDLAG-KR 306
L+P S R +V + +E G+ K + +++ G+ V+ A R
Sbjct: 263 LVPYD-SRKRILCYVHKLFNDVHKELGL-KPRHIFLTNSLTGNGVNLFYSVVLHSAEILR 320
Query: 307 GNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVL 366
V+ IG N+GKSTLLN +AK D + + L + PGTTL V+++ +
Sbjct: 321 SKVYFIGYANSGKSTLLNWLAKF-----ASDTKSPVSPNRLATSIFPGTTLRPVKID--I 373
Query: 367 PAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIK-------AGHSIHIAG 419
+ +L+DTPG+L N IT+ L+ + + K P +R+K G S+ +
Sbjct: 374 GKKYELYDTPGILLTNSITSHLSVDNIPIAIPKKHKAPMIHRVKDGKLYNYLGESLLLGP 433
Query: 420 LMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPI-----GEKRV 474
+R+D+E+S + + T + S +P+ + + E ++ P G K V
Sbjct: 434 FVRIDLEDS--KPYFFTPFISGNIPVRVASRKRLYISKEAQDLSRMYPVYEYDQSGNKIV 491
Query: 475 -----------EELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYE 523
+E V K+F + G W +++VDI GLG+ +V +A + V+T+
Sbjct: 492 HKNSKVPPEMEDEEKMLVPKKFKIIGRGWKTATVDICIRGLGFVAVAGALKATIKVYTHP 551
Query: 524 GVDIVLRNALLP 535
V+I LR ++ P
Sbjct: 552 DVEITLRESMFP 563
>gi|83319349|ref|YP_424399.1| hypothetical protein MCAP_0424 [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
gi|83283235|gb|ABC01167.1| GTP-binding conserved hypothetical protein [Mycoplasma capricolum
subsp. capricolum ATCC 27343]
Length = 367
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/436 (19%), Positives = 170/436 (38%), Gaps = 90/436 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+Q TN GY N+SE +
Sbjct: 4 CLGCGSLLQTTNKFEQGY-------------------VNDSEHA---------------- 28
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
C RC +++Y ++ D + D F + + + + V V
Sbjct: 29 -----------YCLRCFKIKNYNQLVDSEIN----DKQFINKISTLVKNNKNNNLVFYYV 73
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D D GS ++ ++ D +V+LVV KID+LP S+ +
Sbjct: 74 LDIFDLFGSRILEIENLIKDF-----------------KVILVVNKIDILPKSVKLEKIR 116
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+++ + + + ++ SA K ++ L++ V+ + + IGA N GKS+L+
Sbjct: 117 NYINNIFKNSSLKNV-EIFLTSANKINLVEPLLNKVI--KNNKNQQYFIGASNVGKSSLI 173
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + E ++ + + TTL + ++ L +FD+ G+ N
Sbjct: 174 NKML-----------EINQLIPSIVVSKFFNTTLDFIEIQ--LDKNTTIFDSAGVSRKNS 220
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
I + + Q KE++ TY++ +SI +G+ D + + ++ + +
Sbjct: 221 IANLMNKRFQSYCYFKKEIQQFTYQLTNNNSIFFSGVCWFDYISLNNQKTSFHIYTNKEI 280
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH T+N + + L P I ++ ++ + H++ W DI+ +G
Sbjct: 281 NLHRTNTKNVIRYWNNN-RKNLIPYISNSDQIQVYEFKFDKSHLNN--W----YDISISG 333
Query: 504 LGWFSVRLKGEAALGV 519
LGW + +++ E + +
Sbjct: 334 LGWINFKVESEMIIKI 349
>gi|84999858|ref|XP_954650.1| GTPase [Theileria annulata]
gi|65305648|emb|CAI73973.1| GTPase, putative [Theileria annulata]
Length = 550
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 114/511 (22%), Positives = 204/511 (39%), Gaps = 84/511 (16%)
Query: 67 ALTRDGNY-DEATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESE 125
+T D Y D + PK C GCG Q + PGY N + R S + E
Sbjct: 65 GITSDPFYKDISLPKR--CIGCGAQFQTIDQNKPGYVCSDVLNESGARGSSKLPRIRGVE 122
Query: 126 FSNSLKKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVK-----DVTVENLLPDF 180
N+ + G+ V +AE KK V+C RC+ L++Y ++ D + E L+ +F
Sbjct: 123 IENAPE--GVEVNKAELGRFSTKKRR--VICQRCYKLQYYKRLDTKNEVDSSRETLVKEF 178
Query: 181 ----DFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGK 236
+ ++++S++ +++ + + + K +S T+E K
Sbjct: 179 LDGENLKRNALKRVISSNLTAKQFPVLMTQLESETNIANNSVK-ISSTSEIISNMATRIK 237
Query: 237 SGNVPRVVL--------------------------VVTKIDLLPSSLSPTRFEHWVRQRA 270
+ ++ VL + KID+LP + + + W++
Sbjct: 238 NNSLILFVLDLTNLEISVIPELYIALRNRTLEVIWIANKIDVLPKVVDHSEIKRWLKSVV 297
Query: 271 REDGISKITKLHFVSAVKNWGLKSL---IDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIA 327
R G SK + + +S+ K G L + + + R N++ +GA N GKST +N
Sbjct: 298 RHIGNSKSSDVILISSSKGTGFDKLEHRFKEYLRVGDPR-NIYVVGATNVGKSTFVNRFL 356
Query: 328 KSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR 387
+ G + V T + +PGTTL +E LP+ KL DTPG+ +QI +
Sbjct: 357 DFIKYKHVGTLNLRRSVGGTTRSAIPGTTLEF--IEFGLPSGFKLIDTPGIPIISQIPSL 414
Query: 388 LTREEQKL-VNINKELKPRTYRIKAGHSIHIAGLMRMDVEESS---VESIYVTVWASPYL 443
L + + + + K + P ++ G ++ I L R+D+ + S V+ +
Sbjct: 415 LYKPVDLISIAMTKTINPLYIKLDEGQTLLIGALGRVDLVQGSKCIVQCFFACTLIIETE 474
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
PL + + N V + G K ++E G
Sbjct: 475 PLQVKISLNIKVTVNCN---------GPKPLDEF----------------------VICG 503
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
LGWFS G + ++ +GV+ + R A++
Sbjct: 504 LGWFSFSGTGPKIVEMFVPKGVNFLRRPAMI 534
>gi|429327798|gb|AFZ79558.1| hypothetical protein BEWA_024070 [Babesia equi]
Length = 642
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 200/456 (43%), Gaps = 76/456 (16%)
Query: 128 NSLKKGGLVVFEAENETSE------VKKHEKPVVCARCHALRHYG--KVKDVTVENLLPD 179
N+ KG V + ++E + + + + PV+C RC ++ G V V + +
Sbjct: 205 NNQCKGCGVFLQTQHEDKKGYVDHIILQRKVPVLCKRCSSMNSGGIYTVGGVALGQSAKE 264
Query: 180 FDFDHTVGR--KLMSASGARSV-VLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGK 236
TV R +S RS+ ++ ++D D F +A ++ RA +
Sbjct: 265 AS-GETVARLRNALSYHEKRSIKIVYIMDVLDM--YFEEGLANLII-----KRRALAKKV 316
Query: 237 SGNVPRVVLVVTKIDLLPSSLSPTRFEH---WVRQRAREDGISKITKLHFVSAVKNWGLK 293
S R+ +V+ K+DLLP E+ ++ +A + + T+ F+ + K
Sbjct: 317 S---TRLYIVLNKVDLLPKHRRKRIMEYVQRFINNKAPQLRVK--TRDIFLLSAKKGAAI 371
Query: 294 SLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEE-KNIVSHLT---- 348
+L V+ +R ++ +GA N GKSTLLN IA GG+ ++ NI S +T
Sbjct: 372 NLFLSVLLKNARRTRIFFVGATNVGKSTLLNCIANFT----GGETKKIHNIASLMTVSGE 427
Query: 349 ---------------EAP-------VPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITT 386
E P VPGTTL ++ + KLFDTPG++ P +T+
Sbjct: 428 GTNETDSRGKKKKLQEPPNILSTSIVPGTTLSVMHINT--GTGLKLFDTPGIVLPGSLTS 485
Query: 387 RLTREEQKLVNINKELKP-RTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPL 445
LT E KLV + L P + +R++ G++I + +R+D+ + ++AS + +
Sbjct: 486 YLTASELKLV-VPSSLGPLKPHRLRGGYTILLGPFVRIDIVRG--RPFFFNIFASKRIKV 542
Query: 446 HMGKTENACTMVEKHFGRQLQPPIGEKR----VEEL-GKWVRKEFHVSGSSWDSSSVDIA 500
KT VEK P G+ R VE L + + + G+ WD ++ DI
Sbjct: 543 VTKKTFK----VEKFLHTN---PFGDVRLFYGVEPLENSRMARRMKILGAGWDRATTDIC 595
Query: 501 AAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPY 536
GLG+ ++ L V T V + +R L+P+
Sbjct: 596 IQGLGFVTLGGALGLELLVETLPEVTVHMREPLMPF 631
>gi|359403271|ref|ZP_09196178.1| GTPase YqeH [Spiroplasma melliferum KC3]
gi|438118792|ref|ZP_20871437.1| GTP-binding protein YqeH [Spiroplasma melliferum IPMB4A]
gi|357968488|gb|EHJ90997.1| GTPase YqeH [Spiroplasma melliferum KC3]
gi|434155698|gb|ELL44628.1| GTP-binding protein YqeH [Spiroplasma melliferum IPMB4A]
Length = 358
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/452 (21%), Positives = 176/452 (38%), Gaps = 101/452 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV++QDT P GY +Q+
Sbjct: 7 CSGCGVVLQDTRPNDLGYVETLTQD----------------------------------- 31
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
C RC L HY ++ V P DF KL V
Sbjct: 32 -----------YCYRCFRLTHYNELVTYNV----PAIDF----LAKLRQDYHLNWHYFYV 72
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D D DG+ + +++ + +V L++ KIDL+ ++P +
Sbjct: 73 LDVYDLDGTRELALEQLLQNN-----------------KVTLIINKIDLVNKLINPHKII 115
Query: 264 HWVRQRAREDGI-SKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
++ + R + SK+ + VS +KN+GL L + + ++ +G+ N GKSTL
Sbjct: 116 TYISELFRTSVLFSKLEDIILVSGLKNYGLDELWRYI---KRQTNDIVFVGSSNTGKSTL 172
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
LN++ K + + +T + TTL + V L + K++DTPG+++ +
Sbjct: 173 LNSLIKLTNQQQK-----------ITVSNNLATTLDKIVVN--LGTRHKVYDTPGIMNKH 219
Query: 383 QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY 442
+ + L + ++ + LKP T+++ + +I GL S + + +
Sbjct: 220 SLLSYLAENNKNMIT-KQLLKPITFQLNSEQTIFYEGLASFSYLTGLKTSFH--FYKNNN 276
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAA 502
L LH K N + +F L +++ +W + ++ + + + A
Sbjct: 277 LKLHRTKLSNK----DYYFTHHLSTT--AVKLKNYQEWTERVIEIN----EPGNYSLFIA 326
Query: 503 GLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW S + + + V T++ + I LR +
Sbjct: 327 GLGWISFKGQSGQKIMVGTHQNIKITLRKQFI 358
>gi|340751857|ref|ZP_08688667.1| ribosome biogenesis GTPase YqeH [Fusobacterium mortiferum ATCC
9817]
gi|229420821|gb|EEO35868.1| ribosome biogenesis GTPase YqeH [Fusobacterium mortiferum ATCC
9817]
Length = 371
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 190/454 (41%), Gaps = 93/454 (20%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
+C GCG+ +Q P+ GY P+ L + + +
Sbjct: 5 ICIGCGIELQSDYPEKNGYL--PAAKLEEPGEHY-------------------------- 36
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLM 202
C RC +++YGK V L D+ V +++++ V +
Sbjct: 37 -------------CQRCFKIKNYGKYMPVR----LTRDDYRKVVQEEMVNSQ----VAIA 75
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRF 262
V D DF+GSF ++ ++ + ++V+ K+DL+P P+
Sbjct: 76 VFDIIDFEGSFDDEILDVLREMDS-----------------IVVINKLDLIPDEKHPSEV 118
Query: 263 EHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTL 322
+WV+ R E+GI+ + + VS+ +G+ + + +G N GKS++
Sbjct: 119 ANWVKVRLAEEGIAPLD-IAIVSSKNGYGINGIFKKIKHFYPDGVEALVLGVTNVGKSSI 177
Query: 323 LNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
+N + + +T + PGTTL VR + + + L DTPGL+
Sbjct: 178 VNRLLG---------------LKKVTVSKYPGTTLKSVRNQ-IPHTKITLVDTPGLIPEG 221
Query: 383 QITTRLTRE-EQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV-EESSVESIYVTVWAS 440
+I+ + K+V N E+ +T+++ G ++ I L+ + E ++ I+ +++A+
Sbjct: 222 RISDLVCENCNLKMVPAN-EISRKTFKMSKGRALIIGELLWFRILNEDEMKPIF-SLYAA 279
Query: 441 PYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIA 500
+ H + +++ G L PP E ++E K + + V+ + + ++
Sbjct: 280 KDVTFHETNEDKLKELLKTDRGDLLTPPC-ENCIDEYRKLEKIKHRVTVKTGE----ELV 334
Query: 501 AAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GLGW SV+ +G + + + IV+R+A +
Sbjct: 335 FKGLGWISVK-RGPLEIEITAPKEAGIVIRDAFI 367
>gi|146318022|ref|YP_001197734.1| GTPase [Streptococcus suis 05ZYH33]
gi|145688828|gb|ABP89334.1| Predicted GTPase [Streptococcus suis 05ZYH33]
Length = 162
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 88/163 (53%), Gaps = 11/163 (6%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
++DTPG++H +Q+ LT + K ++ KE+KP+TY++ ++ +AGL R D +
Sbjct: 11 IYDTPGIIHRHQMAHYLTAKNLKYISPRKEIKPKTYQLNPEQTLFLAGLGRFDFVAGERQ 70
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSS 491
T + L LH K + A +KH G L PP K ++E + VR EF +
Sbjct: 71 GF--TAFFDNELQLHRTKLQGASEFYQKHAGSLLVPPTS-KELKEFPELVRHEFTI---- 123
Query: 492 WDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
+ D+ +GLGW +R+ +A + W +GVD+V+R A++
Sbjct: 124 --NEKTDVVFSGLGW--IRVNEKAKIAAWAPKGVDVVIRKAII 162
>gi|148907645|gb|ABR16951.1| unknown [Picea sitchensis]
Length = 601
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 106/461 (22%), Positives = 176/461 (38%), Gaps = 98/461 (21%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
VC GCG +Q PGY
Sbjct: 135 VCYGCGAPLQSVEVDGPGYVTL-------------------------------------- 156
Query: 143 ETSEVKKHEK---PVVCARCHALRH---YGKVKDVTVENLLPDFDFDHTVGRKLMSASGA 196
ET E+KK + V+C RC L H V + F + KL
Sbjct: 157 ETYELKKKHRQLRSVLCGRCRLLSHGHMLTAVGGHGGYSGGKQFISAEQLREKLSHLRHD 216
Query: 197 RSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSS 256
+++++ +VD DF+GSF +V +V G P +++V TK+DLLP
Sbjct: 217 KALIVKLVDIVDFNGSFLARVRDLV----------------GANP-IIMVATKVDLLPKG 259
Query: 257 LSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQN 316
+ W+ + ++ + +H S+ G ++ ++ R +V+ +G+ N
Sbjct: 260 TDLSVVGDWIVEATMRKKLN-VLSIHLTSSKSLSGFVGVVSEIQQQRKGR-DVYVLGSAN 317
Query: 317 AGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLF 373
GKS +NA+ K++ D K I ++ VPGTTLG ++++ + KL+
Sbjct: 318 VGKSAFINALLKTMALKDFVAAAARRYKPI-----QSAVPGTTLGPIQIDA-FHGEGKLY 371
Query: 374 DTPGL-LHPNQITT-----------------------RLTREEQKLVNINKELKPRTYRI 409
DTPG+ LH Q LT+E Q+L +K
Sbjct: 372 DTPGVHLHHRQAAVVHAEDLPLLAPQSRLKGITISIDALTKENQELFYTSKTTSCTVDNG 431
Query: 410 KAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPI 469
G SI G++R+DV + + I + ++ + + + T A K G L+PP
Sbjct: 432 LNGLSIFWGGIVRIDVVKVPLH-IRLIMYGPKGVQIKVVPTSEAEEFYHKELGGALKPPT 490
Query: 470 GEKRVEEL-GKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
G+ + + G V + DIA +GLGW ++
Sbjct: 491 GKDKAKNWPGLKGSHPIDVKMGNNSRPVCDIAISGLGWIAI 531
>gi|340370800|ref|XP_003383934.1| PREDICTED: uncharacterized protein C4orf14 homolog [Amphimedon
queenslandica]
Length = 583
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 92/169 (54%), Gaps = 6/169 (3%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
L DTPG ++ Q T LT E +L+ K L PRT +K G S+ + GL R+D +
Sbjct: 393 LHDTPGAVNDIQATNHLTTNELRLMLPKKRLSPRTIILKEGQSVFLGGLARLDYIQGKT- 451
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGE-KRVEELGKWVRKEFHVSG 489
S Y T++ S YLP+H +T +A M ++H G+ L+ P+G+ +R++ +E ++G
Sbjct: 452 SAYFTIFTSSYLPIHTRRTRDADEMYKRHLGQPLLKVPVGDAERIDAFPPLEPEELIITG 511
Query: 490 SSWDSSSVDIAAAGLGWFSVR--LKGEAALGVWTYEGVDIVLRN-ALLP 535
+ SS DI + +GW V L+ E + +T G I +R+ +L P
Sbjct: 512 RGFSSSVCDIILSSVGWVCVTAGLEHEIKILAYTPNGKGIFMRSPSLFP 560
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 30/217 (13%)
Query: 151 EKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFD 210
+KPV+C RC LRHY VT LP D+ + L + +VL+++D DF
Sbjct: 104 DKPVICQRCFYLRHYNNPLHVT----LPPDDYL----KSLSHLKDEKCLVLVIIDGIDFP 155
Query: 211 GSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP--SSLSPTRFEHWVRQ 268
S + +++ +V LV+ KID+LP RFE +++
Sbjct: 156 SSLFPSLRTLLNP---------------QFSKVYLVINKIDVLPLMDESMKIRFESYIKT 200
Query: 269 RAREDGI--SKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAI 326
A E I + + +H+VSA G+ L D + G RGNV+ +G N GKS+L +
Sbjct: 201 EA-EKSIDPATVIGIHYVSAKTGQGVGFLTDSITTEWGNRGNVYLLGCTNVGKSSLFKLL 259
Query: 327 AKSVDAGRGGDGEEKNIVS--HLTEAPVPGTTLGIVR 361
+S+ + G + N +S T + PGTT+G+++
Sbjct: 260 LQSLCGVQPGQLKTVNEISAPSPTISHWPGTTIGLIK 296
>gi|433450833|ref|ZP_20412689.1| ribosome biogenesis GTPase YqeH [Mycoplasma sp. G5847]
gi|431933780|gb|ELK20339.1| ribosome biogenesis GTPase YqeH [Mycoplasma sp. G5847]
Length = 367
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/436 (20%), Positives = 168/436 (38%), Gaps = 90/436 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+Q TN GY N++E +
Sbjct: 4 CLGCGSLLQTTNKLEQGY-------------------VNDTEHA---------------- 28
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
C RC +++Y ++ D + D F + + + V V
Sbjct: 29 -----------YCLRCFKIKNYNQLVDSEIN----DEQFINKISTLVKENEDNHLVFYYV 73
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D D GS ++ ++ D +V+LVV KIDLLP S+ +
Sbjct: 74 LDIFDLFGSRILEIENLIKDF-----------------QVILVVNKIDLLPKSIKLEKIR 116
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+++ + ++ ++ SA K ++ L++ V+ + + IGA N GKS+L+
Sbjct: 117 NYINNVFKTSSLND-PEIFLTSANKLNLVEPLLNKVI--KNNKYQQYFIGASNVGKSSLI 173
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + E ++ + + TTL + ++ L +FD+ G+ N
Sbjct: 174 NKML-----------EINKLIPSIVVSKYFNTTLDFIEIQ--LDKNTTIFDSAGVSRKNS 220
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
I + + Q KE+ TY++ +SI +G+ D S + ++ + +
Sbjct: 221 IANLMNKRFQNYCYFKKEIHQFTYQLANNNSIFFSGVCWFDYLSFSNKKTNFHIYTNKEI 280
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
LH T+N T + + L P I ++ ++ H++ W DI+ +G
Sbjct: 281 NLHRTNTKNV-TRYWNNNRKSLIPYINNSENVQVYEFKFTNEHLNN--W----YDISISG 333
Query: 504 LGWFSVRLKGEAALGV 519
LGW + +++ E + +
Sbjct: 334 LGWINFKVESEMMIRI 349
>gi|317058880|ref|ZP_07923365.1| GTP-binding protein [Fusobacterium sp. 3_1_5R]
gi|313684556|gb|EFS21391.1| GTP-binding protein [Fusobacterium sp. 3_1_5R]
Length = 362
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/458 (20%), Positives = 175/458 (38%), Gaps = 100/458 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ +Q+T+ K GY
Sbjct: 5 CIGCGIPLQNTDSKKDGY------------------------------------------ 22
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
T + ++ + C RC + HYG+ + L D+ ++L + + L V
Sbjct: 23 TPKDINGKEELYCQRCFRVSHYGE----HSSSFLSREDYQ----KELQQWVSPKRLALAV 74
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
D DF+GSF + ++ + ++V+ K+DL+P P+
Sbjct: 75 FDIIDFEGSFQDDILDILREMDS-----------------IVVINKVDLIPGEKHPSEVA 117
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
+WV+ R +GIS + + VS N+G+ ++ + V +G N GKS+++
Sbjct: 118 NWVKGRLASEGISPLD-IAIVSCKNNYGMNGVLRKIQHFYPNGVEVLVLGVTNVGKSSVI 176
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
N + + +T + PGTTL + + + L DTPGL+ +
Sbjct: 177 NRLLGK---------------NRVTVSKYPGTTL-LSTMNEISGTNLCLIDTPGLIPEGR 220
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYL 443
+ + E+Q V + E+ +T++++ I + +++ V + +++AS +
Sbjct: 221 FSDLMIEEDQLRVIPSTEISRKTFKLEKDRCIVLGEFVKLRVLNEEEQRPIFSLYASQGV 280
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAG 503
H E A E L+ K+ ++ F ++ ++ G
Sbjct: 281 QFHETSLEKASLQKENENCLHLKKK---------QKFCKEIFTIAAGE------ELVWKG 325
Query: 504 LGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRSQVF 541
W SV+ +G + V EG DIV+R A + R F
Sbjct: 326 FAWLSVK-RGPLHIEVEYPEGGDIVIRKAFIHPRRVSF 362
>gi|301102847|ref|XP_002900510.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262101773|gb|EEY59825.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 513
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 105/243 (43%), Gaps = 61/243 (25%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ +Q PK GYF P Q LN V ++
Sbjct: 6 CSGCGIELQYKEPKQVGYF--PKQLLNNV-----------------------------HD 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
E+K+ + C RC + YGK+ D +P +++ R++M +++ +
Sbjct: 35 LKELKR----LRCERCFQMTQYGKISDTK----MPYQEYE----RRVMELRSKDMLMIQL 82
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD D GS K + G P V+LVV K DL+P+ R
Sbjct: 83 VDILDISGSLLPKARHIF----------------GKKP-VMLVVNKGDLVPTKSGIRRLM 125
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
++Q A+E G+ + ++ +SA+K G+K +++DV R ++ +GA N GKST L
Sbjct: 126 RRIKQEAKEAGVDNLISIYLISAMKRIGMKEIVEDVAKYRQNR-DICVVGAANVGKSTFL 184
Query: 324 NAI 326
N+
Sbjct: 185 NSF 187
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 98/239 (41%), Gaps = 61/239 (25%)
Query: 346 HLTEAPVPGTTLGIVRVEGVLPAQAK-----LFDTPGLLHPNQITTRLTREEQKLVNI-- 398
+T +P+PGTTL + LP + + DTPGL+ ++ QKLV +
Sbjct: 276 EMTTSPLPGTTLAV----QYLPVMVRNEVFNILDTPGLITDSK--------RQKLVEVLA 323
Query: 399 ------------NKELKPRTYRIKAGHSIHIAGLMRMDVE---ESSVESIYVTVWASPYL 443
+K+L TYR++ G S+ + L R D E + + ++ + W L
Sbjct: 324 LDGAAKLKNVFPSKQLPVTTYRVRPGRSLFLGALARFDYETLGKDNDKNFLLLSWYG-VL 382
Query: 444 PLHMGKTENACTMVEKHFGRQLQPPIGEKRVE-----ELGKWVRKEFHVSGSSWDSSS-- 496
P H+ TE A KH G L PP G + L + V + ++ S+ S
Sbjct: 383 PGHLTNTERAEDTFVKHAGGILSPPRGLDAMSFTGPPTLSQNVYLKDYILDSALTKSKHK 442
Query: 497 -------VDIAAAGLGWFSVR---LKGEAA---------LGVWTYEGVDIVLRNALLPY 536
V++ G GW SV L G A+ + V T G+ +V R L PY
Sbjct: 443 KPKRTTVVELEVPGFGWLSVTAVDLDGTASSQKTLNQGKISVHTCRGLSVVPRAPLFPY 501
>gi|121700106|ref|XP_001268318.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
gi|119396460|gb|EAW06892.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
Length = 658
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 189/451 (41%), Gaps = 99/451 (21%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKV---------------------------RKS 115
CPGCG Q P PGY+ + + K+ S
Sbjct: 83 CCPGCGAYAQTVEPNEPGYYGKSRKQTRKLLSELQQAPQEEHKDVEEGLDLRSEAEKAAS 142
Query: 116 HLVHVANESEFSNSLKKGGLVVFEAENETSE-VKKHEKPV-VCARCHALRHYGKVKDVTV 173
+ +A +SE + K G ++ +A S+ ++K + PV +C RCH L H+ K V
Sbjct: 143 TIQKLAIDSELTIPKAKHGAMLEDAAVTASQYLEKSKAPVQICDRCHDLVHHNKA----V 198
Query: 174 ENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVS--DTAEENERA 231
+ P +++G L + + + VVDAADF S + + +S + N RA
Sbjct: 199 SAISPSI---YSIGELLKESPHRDNRIYHVVDAADFPMSLVDNIYEALSIQEPRSRNRRA 255
Query: 232 WKEGKSG--NVPRVVLVVTKIDLLPSSLSP--TRFEHWVRQRARED-----GISKITKLH 282
E G +P + L++T+ DLL ++ +R E ++R R+ +++ +H
Sbjct: 256 SIEKYRGGKKLPTISLIITRSDLLAATKEQVDSRME-YIRTLLRDTLNLSTEQARLGNVH 314
Query: 283 FVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNA-----------IAKSVD 331
+SA + W K + +++ G +W +G N GKS+ + A IA+ V+
Sbjct: 315 MISAHRGWWTKQVKEEIRKHGG---GIWVVGKANVGKSSFIEACFPKDSRNLEKIAELVE 371
Query: 332 AGRGGDGEEKNIV----------SHLTEAP-------------VPGTTLGIVRVEGVLPA 368
+ EE N+ S L AP VPGTT+ +R+
Sbjct: 372 RRK----EESNVPTFKNIALGFNSLLPPAPREDLYPVLPVVSSVPGTTVSPIRIP-FGHG 426
Query: 369 QAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHS-IHIAGLMRMDVEE 427
+ ++ D PGL Q+ + E ++ + + K KP Y IK G S + GL+R+ E
Sbjct: 427 KGEMIDLPGLDR-GQLENYVRDEHKRDLTMTKRKKPERYTIKPGQSLLLGGGLIRITAEN 485
Query: 428 SSVESIYVTVWASPYLPL--HMGKTENACTM 456
+ A+ ++P+ H+ TE A M
Sbjct: 486 PD-----HLIMAACFIPIEAHVTNTEKAIEM 511
>gi|294782272|ref|ZP_06747598.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 1_1_41FAA]
gi|294480913|gb|EFG28688.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 1_1_41FAA]
Length = 366
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 162/384 (42%), Gaps = 55/384 (14%)
Query: 156 CARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPR 215
C RC L+HYGK N + D+ VG+ L +V+ V D DF+GSF
Sbjct: 35 CQRCFQLKHYGKYS----TNKMTREDYKKEVGKLLDDVK----LVIAVFDIIDFEGSFDV 86
Query: 216 KVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGI 275
++ ++ +E S ++VV K+DL+P P+ +WV+ R E+ I
Sbjct: 87 EILDIL-----------REKDS------IVVVNKLDLIPDEKHPSEVANWVKDRLAEESI 129
Query: 276 SKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRG 335
+ + + VS +G+ + + N IG N GKS+++N + A
Sbjct: 130 APLD-IAIVSTKNGYGVNGIFKKIKHFYPDGVNAMVIGVTNVGKSSVINRLLGKRIA--- 185
Query: 336 GDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP-AQAKLFDTPGLLHPNQITTRLTREEQK 394
T + PGTT I ++P L+DTPGL+ + + L +
Sbjct: 186 ------------TVSKYPGTT--IKNTLNMIPFTNIGLYDTPGLIPEGRASDLLCDSCAQ 231
Query: 395 LVNINKELKPRTYRIKAGHSIHIAGLMRMDV-EESSVESIYVTVWASPYLPLHMGKTENA 453
+ E+ +T++ K I I L+++ V + V+ I+ ++A+ + H E A
Sbjct: 232 KIIPAGEISRKTFKAKYDRIIMIDNLVKIRVLNDEEVKPIF-AIYAAKDVKFHETTIERA 290
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ E +F P R E K ++ + + ++ GLGW SV+ +G
Sbjct: 291 KELEEGNF---FDIPCECCRDE-----YNKHKKITKTLTIKTGEELVFKGLGWVSVK-RG 341
Query: 514 EAALGVWTYEGVDIVLRNALLPYR 537
+ V E ++I +R A + R
Sbjct: 342 PLKIEVTLAEEIEISIRKAFIKPR 365
>gi|340752873|ref|ZP_08689667.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 2_1_31]
gi|422316805|ref|ZP_16398183.1| ribosome biogenesis GTPase YqeH [Fusobacterium periodonticum D10]
gi|229422666|gb|EEO37713.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 2_1_31]
gi|404590606|gb|EKA92965.1| ribosome biogenesis GTPase YqeH [Fusobacterium periodonticum D10]
Length = 366
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 162/384 (42%), Gaps = 55/384 (14%)
Query: 156 CARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPR 215
C RC L+HYGK N + D+ VG+ L +V+ V D DF+GSF
Sbjct: 35 CQRCFQLKHYGKYS----TNKMTREDYKKEVGKLLDDVK----LVIAVFDIIDFEGSFDV 86
Query: 216 KVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGI 275
++ ++ +E S ++VV K+DL+P P+ +WV+ R E+ I
Sbjct: 87 EILDIL-----------REKDS------IVVVNKLDLIPDEKHPSEVANWVKDRLAEESI 129
Query: 276 SKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRG 335
+ + + VS +G+ + + N IG N GKS+++N + A
Sbjct: 130 APLD-IAIVSTKNGYGVNGIFKKIKHFYPDGVNAMVIGVTNVGKSSVINRLLGKRIA--- 185
Query: 336 GDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP-AQAKLFDTPGLLHPNQITTRLTREEQK 394
T + PGTT I ++P L+DTPGL+ + + L +
Sbjct: 186 ------------TVSKYPGTT--IKNTLNMIPFTNIGLYDTPGLIPEGRASDLLCDSCAQ 231
Query: 395 LVNINKELKPRTYRIKAGHSIHIAGLMRMDV-EESSVESIYVTVWASPYLPLHMGKTENA 453
+ E+ +T++ K I I L+++ V + V+ I+ ++A+ + H E A
Sbjct: 232 KIIPAGEISRKTFKAKYDRIIMIDNLVKIRVLNDEEVKPIF-AIYAAKDVKFHETTIERA 290
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ E +F P R E K ++ + + ++ GLGW SV+ +G
Sbjct: 291 KELEEGNF---FDIPCECCRDE-----YNKHKKITKTLTIKTGEELVFKGLGWVSVK-RG 341
Query: 514 EAALGVWTYEGVDIVLRNALLPYR 537
+ V E ++I +R A + R
Sbjct: 342 PLKIEVTLAEEIEISIRKAFIKPR 365
>gi|340757056|ref|ZP_08693660.1| ribosome biogenesis GTPase YqeH [Fusobacterium varium ATCC 27725]
gi|251834325|gb|EES62888.1| ribosome biogenesis GTPase YqeH [Fusobacterium varium ATCC 27725]
Length = 370
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 160/381 (41%), Gaps = 52/381 (13%)
Query: 156 CARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPR 215
C RC +++YGK V + +++ A + + V D DF+GSF
Sbjct: 36 CQRCFKIKNYGKYMPVRLNK--------DDYRKEVQEAMQYSKLAIAVFDIIDFEGSFDD 87
Query: 216 KVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGI 275
++ ++ + ++V+ K+DL+P P+ WV+ R E+GI
Sbjct: 88 EILDVLREMDS-----------------IVVINKLDLIPDDKHPSEVSDWVKDRLAEEGI 130
Query: 276 SKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRG 335
+ + + VS+ +G+ + + +G N GKS+++N +
Sbjct: 131 APLD-IAIVSSKNGYGINGIFKKIKHFFPDGVEAIVLGTTNVGKSSIVNRLL-------- 181
Query: 336 GDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKL 395
G +K VS PGTTL V+ + + L DTPGL+ +I+ + E
Sbjct: 182 --GTKKVTVSKY-----PGTTLKSVKNQ-IPHTNIVLVDTPGLIPEGRISDLVCEECNLK 233
Query: 396 VNINKELKPRTYRIKAGHSIHIAGLMRMDV-EESSVESIYVTVWASPYLPLHMGKTENAC 454
+ + E+ +T+++K G ++ I L+ V E + I+ +++A+ + H TE
Sbjct: 234 MVPSGEISRKTFKVKKGRALLIGELLWFKVLNEDNTMPIF-SLYAAKDVTFHETNTEKLK 292
Query: 455 TMVEKHFGRQLQPPIGEKRVEELG-KWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
++ PP R + + ++K+ V ++ GLGW SV+ +G
Sbjct: 293 ELLSSDRKDLFYPPCDNCRSQYKNLEMIKKKIKVQAGE------ELVFKGLGWISVK-RG 345
Query: 514 EAALGVWTYEGVDIVLRNALL 534
+ V + I +RNA +
Sbjct: 346 PLEIEVTLPKKAGITVRNAFI 366
>gi|146093650|ref|XP_001466936.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134071300|emb|CAM69985.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 918
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 129/583 (22%), Positives = 213/583 (36%), Gaps = 148/583 (25%)
Query: 64 SSLALTRDGNYDEATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKV----RKSHLVH 119
+S+ + ++ P CPGCG L+Q+ + GY +RP + V K+ L H
Sbjct: 261 TSIVMEAPSSFHVPVPGRDCCPGCGALLQNLSEDAFGY-VRPGEIEKYVAQRNEKAQLRH 319
Query: 120 --VANESEFSNSLKKGGLVVFE-------AENETSEVKKHEKPVVCARCHALRHYGKVKD 170
A +E K G V E E + + +P C RCHAL + G
Sbjct: 320 EYAARMAELQAHWAKHGRHVGEEWLDFMTQEEFDAFYRDTPRPFTCHRCHALENLGVEGR 379
Query: 171 VTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENER 230
V + PDF +L + + VV++VVD DF GS + ++S
Sbjct: 380 RKVWS-APDFT------DQLRALKEKKCVVVLVVDITDFPGSMVYDLPGLISMNNS---- 428
Query: 231 AWKEGKSGNVPRVVLVVTKIDLLPSS---------------LSPTRFEHWVRQRAREDGI 275
V++ V K+D + + +S + WV A + G+
Sbjct: 429 ------------VIIAVNKMDCIRNRSFNYASKDRSVAACLVSESYVRRWVMDIAVQFGL 476
Query: 276 --SKITKLHFVSAVKNWGLKSL---IDDVVDLAGKRGN----VWAIGAQNAGKSTLLNAI 326
+I K+ +SA + WG+ L I+D +L +R + + +G N GKS+++NA+
Sbjct: 477 PQHQIKKVVPLSAKRGWGITHLISAIEDAANLNLRRPHKPLPTYFVGVANVGKSSVINAM 536
Query: 327 AKSVDAGR------------GGDGEEKNIV---------------------------SHL 347
A ++ + D + KN V +
Sbjct: 537 AHALYVPQPPHPESRKVYYTKTDAQGKNAVFWRWYTPPNVNQAEMLDIRGRHDKKASKLM 596
Query: 348 TEAPVPGTTLGI--VRV--------------------------EGVLPAQAKLFDTPGLL 379
T + +PGTT+ + VR+ + V Q ++DTPGLL
Sbjct: 597 TVSSLPGTTVAVNAVRLSLGPTAHTAKQERQRLSEGATAPGKADDVAGTQTYIYDTPGLL 656
Query: 380 HPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWA 439
+ LT + + I K P+ + + GH++ + GL +DV + V+
Sbjct: 657 PHWHQRSLLTLLQMRRTLIRKFRNPQCFLLLPGHTLFLGGLAAVDVVRGPPRGLLFLVYT 716
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPP---------------IGEKRVEELGKWVRKE 484
S + + T + + G+ L PP G R+ E ++
Sbjct: 717 SQKVRNAIVNTVQSDAFWREQLGKALDPPGSYEQLLPLDDLSTAAGRPRLSETRSYL--- 773
Query: 485 FHVSGSSWDSSSVDIAAAGLGW--FSVRLKGEAALGVWTYEGV 525
F G D+ GLGW F V + L V T GV
Sbjct: 774 FECYGRHRRRPKADLYVCGLGWTSFCVSEPADVVLRVRTLPGV 816
>gi|262067703|ref|ZP_06027315.1| ribosome biogenesis GTPase YqeH [Fusobacterium periodonticum ATCC
33693]
gi|291378428|gb|EFE85946.1| ribosome biogenesis GTPase YqeH [Fusobacterium periodonticum ATCC
33693]
Length = 366
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 164/390 (42%), Gaps = 55/390 (14%)
Query: 150 HEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADF 209
+++ + C RC L+HYGK N + D+ VG+ L +V+ V D DF
Sbjct: 29 NKEDMYCQRCFQLKHYGKYS----TNKMTREDYKKEVGKLLDDVK----LVIAVFDIIDF 80
Query: 210 DGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQR 269
+GSF ++ ++ + ++VV K+DL+P P+ +WV+ R
Sbjct: 81 EGSFDVEILDILREKDS-----------------IVVVNKLDLIPDEKHPSEVANWVKDR 123
Query: 270 AREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS 329
E+ I+ + + VS +G+ + + N IG N GKS+++N +
Sbjct: 124 LAEESIAPLD-IAIVSTKNGYGVNGIFKKIKHFYPDGVNAMVIGVTNVGKSSVINRLLGK 182
Query: 330 VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP-AQAKLFDTPGLLHPNQITTRL 388
A T + PGTT I ++P L+DTPGL+ + + L
Sbjct: 183 RIA---------------TVSKYPGTT--IKNTLNMIPFTNIGLYDTPGLIPKGRASDLL 225
Query: 389 TREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV-EESSVESIYVTVWASPYLPLHM 447
+ + E+ +T++ K I I L+++ + + V+ I+ ++A+ + H
Sbjct: 226 CDSCAQKIIPAGEISRKTFKAKYDRVIMIDNLVKIRILNDEEVKPIF-AIYAAKDVKFHE 284
Query: 448 GKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWF 507
E A + E +F + P R E K +S + + ++ GL W
Sbjct: 285 TTIERAKELEEGNF---FEIPCECCRDE-----YNKHKKISKTLTIKTGEELVFKGLAWV 336
Query: 508 SVRLKGEAALGVWTYEGVDIVLRNALLPYR 537
SV+ +G + V E ++I +R A + R
Sbjct: 337 SVK-RGPLKIEVTLAEEIEISIRKAFIKPR 365
>gi|403220448|dbj|BAM38581.1| GTPase [Theileria orientalis strain Shintoku]
Length = 585
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 141/306 (46%), Gaps = 20/306 (6%)
Query: 243 VVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDL 302
V+ + K+D+LP + + W+R R G SK + VS+ K + + V
Sbjct: 270 VIWIANKLDVLPKGCEASEIKSWLRSVVRHIGNSKSFNVIPVSSSKGRCRQQQTFEGVGF 329
Query: 303 ------------AGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEA 350
AG+ N++ +GA N GKST ++ + G + V T +
Sbjct: 330 DQLEARLKEYLKAGEPRNIYVVGATNVGKSTFVDRFLDYIHYKHVGTLNLRRSVGGATRS 389
Query: 351 PVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKL-VNINKELKPRTYRI 409
+PGTTL +E LP KL DTPG+ +Q+ + L + L +++ K + P ++
Sbjct: 390 AIPGTTLEF--IEFGLPKGFKLVDTPGIPIISQLPSLLYKPVDLLSISMTKTINPACIKL 447
Query: 410 KAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPI 469
+ G S+ I G+ R+D E S S + + + + + ++ + ++ G +L PP
Sbjct: 448 EEGKSLLIGGVARIDHVEGS--SCTIQCYFGNGVTMKVCRSVASEDIMNYQVGYKLYPPH 505
Query: 470 GEKRVEELGKWVRKEFHVSGSSWDSSSVD-IAAAGLGWFSVRLKGEAALGVWTYEGVDIV 528
++ ++L + ++ V+ + + ++D GLGWFS G + + +G++ +
Sbjct: 506 SKEDYKKLTPF--SKYRVTVNCNGTGALDEFVICGLGWFSFNGTGPKIIEIRIPKGINFL 563
Query: 529 LRNALL 534
R A++
Sbjct: 564 RRPAMI 569
>gi|398019280|ref|XP_003862804.1| hypothetical protein, conserved [Leishmania donovani]
gi|322501035|emb|CBZ36112.1| hypothetical protein, conserved [Leishmania donovani]
Length = 918
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 129/583 (22%), Positives = 213/583 (36%), Gaps = 148/583 (25%)
Query: 64 SSLALTRDGNYDEATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKV----RKSHLVH 119
+S+ + ++ P CPGCG L+Q+ + GY +RP + V K+ L H
Sbjct: 261 TSIVMEAPSSFHVPVPGRDCCPGCGALLQNLSEDAFGY-VRPGEIEKYVAQRNEKAQLRH 319
Query: 120 --VANESEFSNSLKKGGLVVFE-------AENETSEVKKHEKPVVCARCHALRHYGKVKD 170
A +E K G V E E + + +P C RCHAL + G
Sbjct: 320 EYAARMAELQAHWAKHGRHVGEEWLDFMTQEEFDAFYRDTPRPFTCHRCHALENLGVEGR 379
Query: 171 VTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENER 230
V + PDF +L + + VV++VVD DF GS + ++S
Sbjct: 380 RKVWS-APDFT------DQLRALKEKKCVVVLVVDITDFPGSMVYDLPGLISMNNS---- 428
Query: 231 AWKEGKSGNVPRVVLVVTKIDLLPSS---------------LSPTRFEHWVRQRAREDGI 275
V++ V K+D + + +S + WV A + G+
Sbjct: 429 ------------VIIAVNKMDCIRNRSFNYASKDRSVAACLVSESYVRRWVMDIAVQFGL 476
Query: 276 --SKITKLHFVSAVKNWGLKSL---IDDVVDLAGKRGN----VWAIGAQNAGKSTLLNAI 326
+I K+ +SA + WG+ L I+D +L +R + + +G N GKS+++NA+
Sbjct: 477 PQHQIKKVVPLSAKRGWGITHLISAIEDAANLNLRRPHKPLPTYFVGVANVGKSSVINAM 536
Query: 327 AKSVDAGR------------GGDGEEKNIV---------------------------SHL 347
A ++ + D + KN V +
Sbjct: 537 AHALYVPQPPHPESRKVYYTKTDAQGKNAVFWRWYTPPNVNQAEMLDIRGRHDKKASKLM 596
Query: 348 TEAPVPGTTLGI--VRV--------------------------EGVLPAQAKLFDTPGLL 379
T + +PGTT+ + VR+ + V Q ++DTPGLL
Sbjct: 597 TVSSLPGTTVAVNAVRLSLGPTAHTAKQERQRLSEGATAPGKADDVAGTQTYIYDTPGLL 656
Query: 380 HPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWA 439
+ LT + + I K P+ + + GH++ + GL +DV + V+
Sbjct: 657 PHWHQRSLLTLLQMRRTLIRKFRNPQCFLLLPGHTLFLGGLAAVDVVRGPPRGLLFLVYT 716
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPP---------------IGEKRVEELGKWVRKE 484
S + + T + + G+ L PP G R+ E ++
Sbjct: 717 SQKVRNAIVNTVQSDAFWREQLGKALDPPGSYEQLLPLDDLSTAAGPPRLSETRSYL--- 773
Query: 485 FHVSGSSWDSSSVDIAAAGLGW--FSVRLKGEAALGVWTYEGV 525
F G D+ GLGW F V + L V T GV
Sbjct: 774 FECYGRHRRRPKADLYVCGLGWTSFCVSEPADVVLRVRTLPGV 816
>gi|358466528|ref|ZP_09176342.1| hypothetical protein HMPREF9093_00813 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357068959|gb|EHI78923.1| hypothetical protein HMPREF9093_00813 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 366
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 161/384 (41%), Gaps = 55/384 (14%)
Query: 156 CARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPR 215
C RC L+HYGK N + D+ VG+ L +V+ V D DF+GSF
Sbjct: 35 CQRCFQLKHYGKYS----TNKMTREDYKKEVGKLLDDVK----LVIAVFDIIDFEGSFDV 86
Query: 216 KVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGI 275
++ ++ +E S ++VV K+DL+P P+ +WV+ R E+ I
Sbjct: 87 EILDIL-----------REKDS------IVVVNKLDLIPDEKHPSEVANWVKDRLAEESI 129
Query: 276 SKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRG 335
+ + + VS +G+ + + N IG N GKS+++N + A
Sbjct: 130 APLD-IAIVSTKNGYGVNGIFKKIKHFYPDGVNAMVIGVTNVGKSSVINRLLGKRIA--- 185
Query: 336 GDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP-AQAKLFDTPGLLHPNQITTRLTREEQK 394
T + PGTT I ++P L+DTPGL+ + + L +
Sbjct: 186 ------------TVSKYPGTT--IKNTLNMIPFTNIGLYDTPGLIPEGRASDLLCDNCAQ 231
Query: 395 LVNINKELKPRTYRIKAGHSIHIAGLMRMDV-EESSVESIYVTVWASPYLPLHMGKTENA 453
+ E+ +T++ K I I L+++ V + V+ I+ ++A+ + H E A
Sbjct: 232 KIIPAGEISRKTFKAKYDRVIMIDNLVKIRVLNDEEVKPIF-AIYAAKDVKFHETTIERA 290
Query: 454 CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKG 513
+ E +F P R E K +S + + ++ GL W SV+ +G
Sbjct: 291 KELEEGNF---FDIPCECCRDE-----YNKHKKISKTLTIKTGEELVFKGLAWVSVK-RG 341
Query: 514 EAALGVWTYEGVDIVLRNALLPYR 537
+ V E ++I +R A + R
Sbjct: 342 PLKIEVTLAEEIEISIRKAFIKPR 365
>gi|256845344|ref|ZP_05550802.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 3_1_36A2]
gi|256718903|gb|EEU32458.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 3_1_36A2]
Length = 366
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 180/455 (39%), Gaps = 101/455 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q+T+ GY +P N
Sbjct: 5 CVGCGVELQNTDKNLQGYTPKPINN----------------------------------- 29
Query: 144 TSEVKKHEKPVVCARCHALRHYGK--VKDVTVENLLPDFDFDHTVGRKLMSASGARSVVL 201
++ + C RC L+HYGK V +T E D+ VG+ L +V+
Sbjct: 30 -------KEDMYCQRCFQLKHYGKYSVNKMTRE------DYKQEVGKLLDDVK----LVI 72
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V D DF+GSF ++ ++ + +++V K+DL+P P+
Sbjct: 73 AVFDIIDFEGSFDVEILDILREKDS-----------------IVIVNKLDLIPDEKHPSE 115
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
+WV+ R E+ I+ + + VS +G+ + + + N IG N GKS+
Sbjct: 116 VANWVKDRLAEESIAPLD-IAIVSTKNGYGVNGVFRKIKHFYPEGVNAMVIGVTNVGKSS 174
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP-AQAKLFDTPGLLH 380
++N + A T + PGTT I ++P L+DTPGL+
Sbjct: 175 VINRLLGKKIA---------------TVSKYPGTT--IKNTLNMIPFTNIGLYDTPGLIP 217
Query: 381 PNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV-EESSVESIYVTVWA 439
+ + + + + + E+ +T++ K I I L++ + ++ I+ +++A
Sbjct: 218 EGRASDLVCDNCAQKIIPSGEISRKTFKAKYNRMIMIGNLVKFKILNNEEIKPIF-SIYA 276
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
+ + H E A E G P E EE K + V+ + ++ ++
Sbjct: 277 AKDVQFHETTIEKA---KELEAGNFFTIPC-ECCKEEYNKHKK----VNKTLTINTGEEL 328
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GL W SV+ +G + + E ++I +R A +
Sbjct: 329 VFKGLAWVSVK-RGPLNIQITLPEEIEISIRKAFI 362
>gi|294785358|ref|ZP_06750646.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 3_1_27]
gi|294487072|gb|EFG34434.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 3_1_27]
Length = 366
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 178/455 (39%), Gaps = 101/455 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q+T+ GY +P N
Sbjct: 5 CVGCGVELQNTDKNLQGYTPKPINN----------------------------------- 29
Query: 144 TSEVKKHEKPVVCARCHALRHYGK--VKDVTVENLLPDFDFDHTVGRKLMSASGARSVVL 201
++ + C RC L+HYGK V +T E D+ VG+ L +V+
Sbjct: 30 -------KEDMYCQRCFQLKHYGKYSVNKMTRE------DYKKEVGKLLDDVK----LVI 72
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V D DF+GSF ++ ++ + +++V K+DL+P P+
Sbjct: 73 AVFDIIDFEGSFDVEILDILREKDS-----------------IVIVNKLDLIPDEKHPSE 115
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
+WV+ R E+ I+ + + VS +G+ + + + N IG N GKS+
Sbjct: 116 VANWVKDRLAEESIAPLD-IAIVSTKNGYGVNGVFRKIKHFYPEGVNAMVIGVTNVGKSS 174
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP-AQAKLFDTPGLLH 380
++N + A T + PGTT I ++P L+DTPGL+
Sbjct: 175 VINRLLGKKIA---------------TVSKYPGTT--IKNTLNMIPFTNIGLYDTPGLIP 217
Query: 381 PNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV-EESSVESIYVTVWA 439
+ + + + + + E+ +T++ K I I L++ + ++ I+ +++A
Sbjct: 218 EGRASDLVCDNCAQKIIPSGEISRKTFKAKYNRMIMIGNLVKFKILNNDEIKPIF-SIYA 276
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
+ + H E A E G P + K K V+ + ++ ++
Sbjct: 277 AKDVQFHETTIEKA---KELEAGNFFTIP-----CDCCKKEYNKHKKVNKTLTINTGEEL 328
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GL W SV+ +G + + E ++I +R A +
Sbjct: 329 VFKGLAWVSVK-RGPLNIQITLPEEIEISIRKAFI 362
>gi|373497682|ref|ZP_09588204.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 12_1B]
gi|371962822|gb|EHO80399.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 12_1B]
Length = 370
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 159/380 (41%), Gaps = 50/380 (13%)
Query: 156 CARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPR 215
C RC +++YGK V + +++ A + + V D DF+GSF
Sbjct: 36 CQRCFKIKNYGKYMPVRLNK--------DDYRKEVQEAMQYSKLAVAVFDIIDFEGSFDD 87
Query: 216 KVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGI 275
++ ++ + ++V+ K+DL+P P+ WV+ R E+GI
Sbjct: 88 EILDVLREMDS-----------------IVVINKLDLIPDDKHPSEVSDWVKDRLAEEGI 130
Query: 276 SKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRG 335
+ + + VS+ +G+ + + +G N GKS+++N +
Sbjct: 131 APLD-IAIVSSKNGYGINGIFKKIKHFYPDGVEAIVLGVTNVGKSSIVNRLL-------- 181
Query: 336 GDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKL 395
G +K VS PGTTL V+ + + L DTPGL+ +I+ + E
Sbjct: 182 --GAKKVTVSKY-----PGTTLKSVKNQ-IPHTNIVLVDTPGLIPEGRISNLVCEECNLK 233
Query: 396 VNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACT 455
+ + E+ +T+++K G ++ I L+ V +++A+ + H TE
Sbjct: 234 MVPSGEISRKTFKVKKGRALLIGELLWFRVLNEDDTMPIFSLYAAKDVTFHETNTERLKE 293
Query: 456 MVEKHFGRQLQPPIGEKRVE-ELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGE 514
++ L PP R + + + ++K+ V ++ GLGW SV+ +G
Sbjct: 294 LLASGRKDLLYPPCDNCRDQYKKLEMIKKKIKVQAGE------ELVFKGLGWISVK-RGP 346
Query: 515 AALGVWTYEGVDIVLRNALL 534
+ V + I++R+A +
Sbjct: 347 LEIEVTLPKEAGIIVRDAFI 366
>gi|156372752|ref|XP_001629200.1| predicted protein [Nematostella vectensis]
gi|156216194|gb|EDO37137.1| predicted protein [Nematostella vectensis]
Length = 500
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 100/172 (58%), Gaps = 6/172 (3%)
Query: 369 QAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEES 428
Q +DTPG++ NQIT+ LT +E KL++ N+ + PRT ++ G ++ + GL R+D ++
Sbjct: 322 QLWFYDTPGIISENQITSYLTLKEIKLLSPNRWMVPRTLILRPGQTLLLGGLGRLDFLKA 381
Query: 429 SVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIG-EKRVEELGKWVRKEFH 486
+ +SIY TV+ASP LP+H+ T A +++H G L+ P G EKR+ + E
Sbjct: 382 N-KSIYFTVFASPNLPVHVLNTLKADNFLQQHGGSNILKVPCGDEKRMALFPPLLPHELS 440
Query: 487 VSGSSWDSSSVDIAAAGLGWFSVR--LKGEAALGVWTYEGVDIVLR-NALLP 535
+ G+ W S+ D+ + GW +V + + +L +T G + +R ALLP
Sbjct: 441 LVGAGWGESAADVVLSNAGWVAVTAGMGADVSLKAYTPNGRGVGVRIPALLP 492
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 118/285 (41%), Gaps = 69/285 (24%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
CPGCG + Q + + PGY IR ++ K R + ANES+
Sbjct: 1 CPGCGSIFQSNDIESPGY-IRAEKHPEKQRS----YYANESQ------------------ 37
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC LR+Y K +P V + L S ++++L V
Sbjct: 38 ----------VICQRCFDLRYYSKA--------IPTLVNTAQVTKFLSHISRRKALILYV 79
Query: 204 VDAADFDGS-FPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSS----LS 258
VD D GS FP + + G R+V+V K+D+LP L
Sbjct: 80 VDILDLPGSTFPHLLDIV-----------------GPAKRIVIVANKVDMLPQDGRPWLQ 122
Query: 259 PTRFEHWVRQRAREDGI--SKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQN 316
R V + RE G+ + + VSA + +G+ L+ ++ G+++ +G N
Sbjct: 123 EKRLREEVLRLCREHGLESGNVKDVCLVSAKEGFGVPQLVQKILVHWDHDGDIYMLGCSN 182
Query: 317 AGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVR 361
+GK+TL N ++ + N++ T + PGTT+ ++R
Sbjct: 183 SGKTTLFNTFMDLLNVHK----RRGNMLQRSTVSKWPGTTMSLMR 223
>gi|91090296|ref|XP_971651.1| PREDICTED: similar to CG10914 CG10914-PA [Tribolium castaneum]
gi|270013800|gb|EFA10248.1| hypothetical protein TcasGA2_TC012448 [Tribolium castaneum]
Length = 709
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 92/171 (53%), Gaps = 10/171 (5%)
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES 432
FDTPG++ P+QI LT EE L + L PRT +K S+ IAGL R+D + S
Sbjct: 518 FDTPGVVQPDQIIHLLTTEELLLTLPKELLVPRTLCLKPNSSLFIAGLARLDYVDGPT-S 576
Query: 433 IYVTVWASPYLPLHMGKTENACTMVEKHFGRQL-QPPIGEKRVEELGKW----VRKEFHV 487
I TV+AS LPL + E+A + +K G L + P G+ + L +W + KEF V
Sbjct: 577 IRFTVFASQELPLTVCAIEDAEEIYQKLLGTDLFRVPSGDSK--RLSRWPSLELAKEFTV 634
Query: 488 SGSSWDSSSVDIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPY 536
G SW SS D+ + GW +V + + E L WT E + +R+ LLP+
Sbjct: 635 KGRSWYESSNDVVLSNAGWVAVTGKTELEYKLQAWTPEKRGVYIRDCLLPH 685
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 137/334 (41%), Gaps = 76/334 (22%)
Query: 73 NYDEATPKLTV----CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSN 128
NY P + + C GCG L+ + PGY PS+ F N
Sbjct: 187 NYGTPDPSIAISNVPCGGCGALLHCKDTAIPGYI--PSEI-----------------FKN 227
Query: 129 SLKKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGR 188
S GG + + +VC RCH L+HY V V PD D+ +
Sbjct: 228 SFLDGGATL--------------EAIVCQRCHFLKHYNLALQVQVT---PD-DY----PK 265
Query: 189 KLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVT 248
L S S +V+++VD DF S + ++ G +V+V
Sbjct: 266 VLASISRRGGLVVLMVDLLDFPCSIWPGIGEIF----------------GYKTPLVVVGN 309
Query: 249 KIDLLPSSLSPTRFEHWVRQ------RAREDGISKITKLHFVSAVKNWGLKSLIDDVVDL 302
K+DLLP F ++Q + + G I ++ +SA +G++ LI + L
Sbjct: 310 KVDLLPQD--SRNFLKRIKQTLLDYVKLQGFGSFDIKEVALISAKTGFGVEDLITRLSSL 367
Query: 303 AGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRV 362
+G+V+ +G N GKS+L NA+ +S D + + +++ T + PGTTL +++
Sbjct: 368 NRVKGDVYIVGCTNVGKSSLFNALIQS-DYCK---TQAIDLIQRATTSVWPGTTLNLLKF 423
Query: 363 EGVLPAQAKLF---DTPGLLHPNQITTRLTREEQ 393
PA + F LLH Q+ R+EQ
Sbjct: 424 PIKRPAGYRQFLREKRLNLLHKIQVEESKLRKEQ 457
>gi|404366403|ref|ZP_10971786.1| ribosome biogenesis GTPase YqeH [Fusobacterium ulcerans ATCC 49185]
gi|313689249|gb|EFS26084.1| ribosome biogenesis GTPase YqeH [Fusobacterium ulcerans ATCC 49185]
Length = 370
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 159/380 (41%), Gaps = 50/380 (13%)
Query: 156 CARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPR 215
C RC +++YGK V + +++ A + + V D DF+GSF
Sbjct: 36 CQRCFKIKNYGKYMPVRLNK--------DDYRKEVQEAMQYSKLAVAVFDIIDFEGSFDD 87
Query: 216 KVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGI 275
++ ++ + ++V+ K+DL+P P+ WV+ R E+GI
Sbjct: 88 EILDVLREMDS-----------------IVVINKLDLIPDDKHPSEVSDWVKDRLAEEGI 130
Query: 276 SKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRG 335
+ + + VS+ +G+ + + +G N GKS+++N +
Sbjct: 131 APLD-IAIVSSKNGYGINGIFKKIKHFYPDGVEAIVLGVTNVGKSSIVNRLL-------- 181
Query: 336 GDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKL 395
G +K VS PGTTL V+ + + L DTPGL+ +I+ + E
Sbjct: 182 --GAKKVTVSKY-----PGTTLKSVKNQ-IPHTNIVLVDTPGLIPEGRISDLVCEECNLK 233
Query: 396 VNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACT 455
+ + E+ +T+++K G ++ I L+ V +++A+ + H TE
Sbjct: 234 MVPSGEISRKTFKVKKGRALLIGELLWFRVLNEDDTMPIFSLYAAKDVTFHETNTERLKE 293
Query: 456 MVEKHFGRQLQPPIGEKRVE-ELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGE 514
++ L PP R + + + ++K+ V ++ GLGW SV+ +G
Sbjct: 294 LLTSGRKDLLYPPCDNCRDQYKKLEMIKKKIKVQAGE------ELVFKGLGWISVK-RGP 346
Query: 515 AALGVWTYEGVDIVLRNALL 534
+ V + I++R+A +
Sbjct: 347 LEIEVTLPKEAGIIVRDAFI 366
>gi|71031054|ref|XP_765169.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352125|gb|EAN32886.1| hypothetical protein, conserved [Theileria parva]
Length = 662
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 138/323 (42%), Gaps = 34/323 (10%)
Query: 242 RVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVD 301
R L++ KIDLLP + + + + + K + +S + L+ ++
Sbjct: 334 RFYLILNKIDLLPKHNKEELVQFFKKMINSKVELLKAKHIFTISGKYRKNVGELMGVILT 393
Query: 302 LAGKRGN-VWAIGAQNAGKSTLLNAIAKSV-----------DAGRGGDGEEKNIVS-HLT 348
A + GN + IG N+GKSTL+N + K + G + N V +T
Sbjct: 394 EAKRLGNQILFIGPTNSGKSTLINLLHKQFTHNSLHKQFTHNTTNGVTNKSDNCVCKRVT 453
Query: 349 EAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKP-RTY 407
+ +PGTTLG++ + L ++DTPG+ PN + + + K + I + + P +
Sbjct: 454 SSIIPGTTLGVINIS--LGGGLSIYDTPGIFVPNSLISHVNDVNLKHL-ITQNIYPNKPI 510
Query: 408 RIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQL-- 465
+K G+S+ I +R+D+ S ++ + S L LH+ T + KH+ Q+
Sbjct: 511 TLKKGYSMLIDRYVRLDM--ISGRDVFFKCYFSDKLKLHIKPTHIINQFLRKHYNNQVLY 568
Query: 466 ----QPPI---------GEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLK 512
Q P V WV + V S W+ ++ D+ GLG+ +V
Sbjct: 569 YPTTQYPTTINSGNNMNNNTTVNTGETWVGRRIGVVMSGWEVATCDLCIKGLGFLTVGGA 628
Query: 513 GEAALGVWTYEGVDIVLRNALLP 535
A ++T + + LR + P
Sbjct: 629 LSADFNLYTMKDISCHLRPPIFP 651
>gi|422940271|ref|ZP_16967611.1| ribosome biogenesis protein GTPase YqeH [Fusobacterium nucleatum
subsp. animalis ATCC 51191]
gi|339889924|gb|EGQ79133.1| ribosome biogenesis protein GTPase YqeH [Fusobacterium nucleatum
subsp. animalis ATCC 51191]
Length = 366
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 177/458 (38%), Gaps = 101/458 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q+T+ GY +P
Sbjct: 5 CVGCGVELQNTDKNLQGYTPKPINT----------------------------------- 29
Query: 144 TSEVKKHEKPVVCARCHALRHYGK--VKDVTVENLLPDFDFDHTVGRKLMSASGARSVVL 201
++ + C RC L+HYGK V +T E D+ + VG+ L +V+
Sbjct: 30 -------KEDMYCQRCFQLKHYGKYSVNKMTRE------DYRNEVGKLLDDVK----LVI 72
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V D DF+GSF ++ ++ + ++VV K+DL+P P+
Sbjct: 73 AVFDIIDFEGSFDVEILDILREKDS-----------------IVVVNKLDLIPDEKHPSE 115
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
+WV+ R E+ I + + VS +G+ + + N IG N GKS+
Sbjct: 116 VANWVKDRLAEESILPL-DIAIVSTKNGYGVNGIFRKIKHFYPDGVNAMVIGVTNVGKSS 174
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP-AQAKLFDTPGLLH 380
++N + A T + PGTT I ++P L+DTPGL+
Sbjct: 175 VINRLLGKKIA---------------TVSKYPGTT--IKNTLNMIPFTNIGLYDTPGLIP 217
Query: 381 PNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV-EESSVESIYVTVWA 439
+ + + + + + E+ +T++ K I I L++ + ++ I+ +++A
Sbjct: 218 EGRASDLVCDNCAQKIIPSGEISRKTFKAKYNRMIMIGNLVKFKILNNEEIKPIF-SIYA 276
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
+ + H E A E G P E + K V+ + ++ ++
Sbjct: 277 AKDVQFHETTIEKA---RELEVGNFFTIP-----CECCKEEYNKHKKVNKTLTINTGEEL 328
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYR 537
GL W SV+ +G + + E +DI +R A + R
Sbjct: 329 VFKGLAWVSVK-RGPLNIQITLPEEIDISIRKAFISPR 365
>gi|237744888|ref|ZP_04575369.1| GTP-binding protein [Fusobacterium sp. 7_1]
gi|336400671|ref|ZP_08581444.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 21_1A]
gi|229432117|gb|EEO42329.1| GTP-binding protein [Fusobacterium sp. 7_1]
gi|336161696|gb|EGN64687.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 21_1A]
Length = 366
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 177/458 (38%), Gaps = 101/458 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q+T+ GY +P
Sbjct: 5 CVGCGVELQNTDKNLQGYTPKPINT----------------------------------- 29
Query: 144 TSEVKKHEKPVVCARCHALRHYGK--VKDVTVENLLPDFDFDHTVGRKLMSASGARSVVL 201
++ + C RC L+HYGK V +T E D+ + VG+ L +V+
Sbjct: 30 -------KEDMYCQRCFQLKHYGKYSVNKMTRE------DYRNEVGKLLDDVK----LVI 72
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V D DF+GSF ++ ++ + ++VV K+DL+P P+
Sbjct: 73 AVFDIIDFEGSFDVEILDILREKDS-----------------IVVVNKLDLIPDEKHPSE 115
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
+WV+ R E+ I + + VS +G+ + + N IG N GKS+
Sbjct: 116 VANWVKDRLVEESILPL-DIAIVSTKNGYGVNGIFRKIKHFYPDGVNAMVIGVTNVGKSS 174
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP-AQAKLFDTPGLLH 380
++N + A T + PGTT I ++P L+DTPGL+
Sbjct: 175 VINRLLGKKIA---------------TVSKYPGTT--IKNTLNMIPFTNIGLYDTPGLIP 217
Query: 381 PNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV-EESSVESIYVTVWA 439
+ + + + + + E+ +T++ K I I L++ + ++ I+ +++A
Sbjct: 218 EGRASDLVCDNCAQKIIPSGEISRKTFKAKYNRMIMIGNLVKFKILNNEEIKPIF-SIYA 276
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
+ + H E A E G P E + K V+ + ++ ++
Sbjct: 277 AKDVQFHETTIEKA---RELEVGNFFTIP-----CECCKEEYNKHKKVNKTLTINTGEEL 328
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYR 537
GL W SV+ +G + + E +DI +R A + R
Sbjct: 329 VFKGLAWVSVK-RGPLNIQITLPEEIDISIRKAFISPR 365
>gi|401425501|ref|XP_003877235.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493480|emb|CBZ28768.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 918
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 147/668 (22%), Positives = 244/668 (36%), Gaps = 164/668 (24%)
Query: 64 SSLALTRDGNYDEATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKV----RKSHLVH 119
+S+ + ++ P C GCG L+Q+ + GY ++P + V K+ L H
Sbjct: 261 ASIVMEAPSSFHVPVPGRDCCTGCGALLQNVSDDAFGY-VQPGEIEKYVAQRNEKAQLRH 319
Query: 120 --VANESEFSNSLKKGGLVVFE-------AENETSEVKKHEKPVVCARCHALRHYGKVKD 170
A +E +K G V E E + + +P C RCHAL + G
Sbjct: 320 EYAARMAELQAHWEKHGRHVGEEWLDFMTQEEFDAFYRDTPRPFTCHRCHALENLGVEGR 379
Query: 171 VTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENER 230
V + PDF +L + + VV++VVD DF GS + ++
Sbjct: 380 RKVWS-APDFT------DQLRALKEKKCVVVLVVDITDFPGSMVYDLPGLI--------- 423
Query: 231 AWKEGKSGNVPRVVLVVTKIDLL--------------PSSLSPTRF-EHWVRQRAREDGI 275
S N P V++ V K+D + + L P + WV A + G+
Sbjct: 424 ------SMNNP-VIIAVNKMDCIRNRSFNYAGKDRSVAACLVPESYVRRWVMDIAVQFGL 476
Query: 276 S--KITKLHFVSAVKNWGLKSL---IDDVVDLAGKRGN----VWAIGAQNAGKSTLLNAI 326
+I K+ +SA + WG+ L I+D +L +R + + +G N GKS+++NA+
Sbjct: 477 PQHQIKKVVPLSAKRGWGITHLISAIEDAANLNLRRPHKPLPTYFVGVANVGKSSVINAM 536
Query: 327 AKSVDAGRGGDGEEKNIVSHLTEA------------------------------------ 350
A ++ + E + + T+A
Sbjct: 537 AHALYVPQPPHPESRKVYYTKTDAQGKKAVFWRWYTPPNVNQAEMLDIRGRHDKKASKLM 596
Query: 351 ---PVPGTTLGI--VRV--------------------------EGVLPAQAKLFDTPGLL 379
+PGTT+ + VR+ + V Q ++DTPGLL
Sbjct: 597 TVSSLPGTTVAVNAVRLSLGPTPHAVKQEQQRLSESAAAPGKPDDVAGTQTYIYDTPGLL 656
Query: 380 HPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWA 439
+ LT + + I K P+ + + GH++ + GL +DV + V+
Sbjct: 657 PHWHERSLLTLLQMRRTLIRKFRNPQCFLLLPGHTLFLGGLAAVDVVRGPPRGLLFLVYT 716
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPP---------------IGEKRVEELGKWVRKE 484
S + + T + + G+ L PP G R+ E ++
Sbjct: 717 SQKVRNAIVNTVQSDAFWREQLGKALDPPGSYEQLLPLDDLSSAAGPPRLSETRSYL--- 773
Query: 485 FHVSGSSWDSSSVDIAAAGLGW--FSVRLKGEAALGVWTYEGV-----------DIVLRN 531
F G D+ GLGW F V + L V T GV D++ R
Sbjct: 774 FECYGRHRRRPKADLYVCGLGWTSFCVSEPADVVLRVRTLPGVVHGVREPLRFKDLLARR 833
Query: 532 ALLPYRSQVFEVAGFTVSKIISKAD-QSLNKSKRLNEAKRKPREPEGTIHP-KSSLSTID 589
A P + F G + + S D S+N RL A P P ++S+ T++
Sbjct: 834 A-WPKLKRRFTAKG--IEDMESDVDSDSINTVVRLISAPVTPAPAASADEPAEASVRTVE 890
Query: 590 SVSSSCQH 597
V+ H
Sbjct: 891 RVAHPRHH 898
>gi|118359870|ref|XP_001013173.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|89294940|gb|EAR92928.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 690
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 187/473 (39%), Gaps = 111/473 (23%)
Query: 149 KHEKPVVCARCHALRHYGKVKDVTVE-------------NLLPDFDFDHT---------- 185
K++KP+ C RCH L++ + D E NL D + DH
Sbjct: 211 KYKKPI-CYRCHQLKYQKNLIDQQSEISRQNQQEQNQQSNLSDDENEDHQQELEMTDFEK 269
Query: 186 -----------VGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKE 234
+K S ++ VVDA D + + + A+ +
Sbjct: 270 GDLLATKDPSEFLKKAFKLVKRNSTIIFVVDATDLFATLNTSIV----------DYAFAQ 319
Query: 235 GKSGNVPRVVLVVTKIDLLP-SSLSPTRFEHWVRQRARE---DGISKITKLHFVSAVKNW 290
+++L V KID LP +++ + + V++ E + + + + VSA
Sbjct: 320 N-----HKIILAVNKIDALPPNNVQFNQLKSVVKKCILEKYPNNLHLLEDIVLVSAKSGE 374
Query: 291 GLKSLIDDVVD--LAGKR-------GNVWAIGAQNAGKSTLLNAI--------------- 326
GL+ + ++ + K+ N + +G N GKS+ +NA+
Sbjct: 375 GLEKITKYIISAKMESKQYQHSRYSKNFYVMGFANTGKSSFINALNRQTKKLLKKQEDQQ 434
Query: 327 ---------------AKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAK 371
K + G GEE + LT + +PGTT+ V+
Sbjct: 435 TNSNPENLNSQDKLMIKRLLGGTSVGGEEDD--QELTTSSIPGTTVSFVKSRNK-RLNVN 491
Query: 372 LFDTPGLLHPNQITTRLTR-EEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSV 430
++DTPG+ +P+Q+ + + K++ I+K++ P+ + I S+ GL R+D ++
Sbjct: 492 IYDTPGIPNPHQLYHYFSNPTDAKIIVIDKKISPQVFTISKDLSVFFGGLARID--QTQG 549
Query: 431 ESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGS 490
+ V+ S ++ +H+ K+ A + K + L P + + + + HV
Sbjct: 550 IDVNAAVFMSSHIAVHVTKSYKANEVFIKQYNNILVPVLNPDFTQIIFQR-----HVIDI 604
Query: 491 SWDS---SSVDIAAAGLGWFSVR----LKGEAALGVWTYEGVDIVLRNALLPY 536
S+DS + D+ GLGW S KGEA ++ EGV LR + +
Sbjct: 605 SFDSKGRCNQDLEIFGLGWLSFTSQKVCKGEAQFFLYLPEGVQYKLRESFYKF 657
>gi|242021419|ref|XP_002431142.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212516391|gb|EEB18404.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 528
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 83/163 (50%), Gaps = 5/163 (3%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG++ NQ+ LT +E + + PR + +K+G S+ I GL R+D S V
Sbjct: 329 FYDTPGVVQKNQLINLLTTQELSITLPKTVVTPRIFHLKSGTSLFIGGLARLDF-VSGVN 387
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQL--QPPIGEKRVEELGKWVRKEFHVSG 489
SI++ V+AS LP+ + ENA + G L P G+ R+ + + ++F + G
Sbjct: 388 SIWLCVFASSELPVTITSIENAEDVYNTLLGSNLFKVPCGGDDRLSKWPELSSEKFEIVG 447
Query: 490 SSWDSSSVDIAAAGLGWFSVRLK--GEAALGVWTYEGVDIVLR 530
D +S D+ + GW S+ LK L WT +G I LR
Sbjct: 448 KYPDEASADVVLSSAGWVSIALKPANYCTLEAWTPQGKGICLR 490
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 123/296 (41%), Gaps = 74/296 (25%)
Query: 72 GNYDEATPKLTV-CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSL 130
G D P V C GCG L+Q ++ + PG+ L
Sbjct: 3 GTADPTIPVSDVPCGGCGALLQCSSEREPGF----------------------------L 34
Query: 131 KKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKL 190
K V +A+ E+ C RC+ L Y V N++P+ ++ V +
Sbjct: 35 PKELFVNKKAKKLRGEI--------CQRCYFLNEYNIALGV---NVMPE-EYQFIVSQ-- 80
Query: 191 MSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKI 250
+++V+++VD DF S + K++ D VVLV KI
Sbjct: 81 --IKNKKALVILMVDLLDFPCSIWPGIDKLIGDN-----------------NVVLVGNKI 121
Query: 251 DLLPSSLSPTRFEHWV-----RQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGK 305
DL +FE + + +E+ SKI + +SA +G++ LI+ + + G
Sbjct: 122 DLF---YQEKKFETQMLNSLKEELKKENLQSKILDIQLISAKTGYGVEKLINFLGKVWGT 178
Query: 306 RGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVR 361
+G+++ +G N GKSTL N + KS D R E N + T + PGTTL +++
Sbjct: 179 KGDMYLVGCTNVGKSTLFNILLKS-DLCR---IEADNKLHRATISSWPGTTLNLLK 230
>gi|336417944|ref|ZP_08598224.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 11_3_2]
gi|336160876|gb|EGN63904.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 11_3_2]
Length = 366
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 98/457 (21%), Positives = 174/457 (38%), Gaps = 99/457 (21%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q+T+ GY +P
Sbjct: 5 CVGCGVELQNTDKNLQGYTPKPINT----------------------------------- 29
Query: 144 TSEVKKHEKPVVCARCHALRHYGK--VKDVTVENLLPDFDFDHTVGRKLMSASGARSVVL 201
++ + C RC L+HYGK V +T E D+ + VG+ L +V+
Sbjct: 30 -------KEDMYCQRCFQLKHYGKYSVNKMTRE------DYRNEVGKLLDDVK----LVI 72
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V D DF+GSF ++ ++ + ++VV K+DL+P P+
Sbjct: 73 AVFDIIDFEGSFDVEILDILREKDS-----------------IVVVNKLDLIPDEKHPSE 115
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
+WV+ R E+ I + + VS +G+ + + N IG N GKS+
Sbjct: 116 VANWVKDRLAEESILPL-DIAIVSTKNGYGVNGIFRKIKHFYPDGVNAMVIGVTNVGKSS 174
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP-AQAKLFDTPGLLH 380
++N + A T + PGTT I ++P L+DTPGL+
Sbjct: 175 VINRLLGKKIA---------------TVSKYPGTT--IKNTLNMIPFTNIGLYDTPGLIP 217
Query: 381 PNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWAS 440
+ + + + + + E+ +T++ K I I L++ + + +++A+
Sbjct: 218 EGRASDLVCDNCAQKIIPSGEISRKTFKAKYNRMIMIGNLVKFKILNNEEIKPIFSIYAA 277
Query: 441 PYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIA 500
+ H E A E G P E + K V+ + ++ ++
Sbjct: 278 KDVQFHETTIEKA---RELEAGNFFTIP-----CECCKEEYNKHKKVNKTLTINTGEELV 329
Query: 501 AAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYR 537
GL W SV+ +G + + E +DI +R A + R
Sbjct: 330 FKGLAWVSVK-RGPLNIQITLPEEIDISIRKAFISPR 365
>gi|283768325|ref|ZP_06341237.1| putative ribosome biogenesis GTPase YqeH [Bulleidia extructa W1219]
gi|283104717|gb|EFC06089.1| putative ribosome biogenesis GTPase YqeH [Bulleidia extructa W1219]
Length = 348
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 167/404 (41%), Gaps = 74/404 (18%)
Query: 138 FEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR 197
++A +E K E + C RC LRHY D V + F D + L
Sbjct: 12 YDAADEVGYSPKKE-ALYCQRCFRLRHY----DDPVYS--KRFGIDPRL--VLQGIQNQE 62
Query: 198 SVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSL 257
V+++V+D + S E+ + + SG ++LV+TK D+LP+ +
Sbjct: 63 GVLVLVMDCFAIEESL---------------EQPFLQEFSGR--EILLVLTKRDILPAEI 105
Query: 258 SPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNA 317
+ V ++ R + I ++ F S N G + LI+ + ++ +G NA
Sbjct: 106 EEEKIVKMVVKKIRSKKLP-IQQVFFHSVKLNLGNEELINYLYQYPLGTNFIF-MGLANA 163
Query: 318 GKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGI--VRVEGVLPAQAKLFDT 375
GKS+LLN + + + LT + PGTTL +R +G DT
Sbjct: 164 GKSSLLNQLLE---------------MDTLTASCYPGTTLSFSKLRKDGY-----TFIDT 203
Query: 376 PGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYV 435
PG+ ++ + K V NK L R Y++ + S I L RMD+ + E
Sbjct: 204 PGMEIRASYVMEVSESDLKKVLPNKTLVARNYQLYSPQSYFIGALFRMDL--TPTERASA 261
Query: 436 TVWASPYLPLHMGKTENACTMVEKHFGRQLQP----PIGEKRVEELGKWVRKEFHVSGSS 491
T + L +H K E A + + G+ L+P + E+R E GK
Sbjct: 262 TFYFHDQLKIHRTKLEQANDLYRRQKGKDLKPCLTKDLSEERNVEKGK------------ 309
Query: 492 WDSSSVDIAAAGLGWFSVRLKGE-AALGVWTYEGVDIVLRNALL 534
VDI GLGW + L G + ++ +G+++ R A+L
Sbjct: 310 ---DKVDIVLPGLGW--ICLSGHFQEIKLYLPKGIEVYTRKAIL 348
>gi|254303086|ref|ZP_04970444.1| possible GTP-binding protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323278|gb|EDK88528.1| possible GTP-binding protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 366
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 180/455 (39%), Gaps = 101/455 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q+T+ GY +P
Sbjct: 5 CVGCGVELQNTDKNLQGYTPKPINT----------------------------------- 29
Query: 144 TSEVKKHEKPVVCARCHALRHYGK--VKDVTVENLLPDFDFDHTVGRKLMSASGARSVVL 201
++ + C RC L+HYGK V +T E D+ VG+ L +V+
Sbjct: 30 -------KEDMYCQRCFQLKHYGKYSVNKMTRE------DYKQEVGKLLDDVK----LVI 72
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V D DF+GSF ++ ++ + +++V K+DL+P P+
Sbjct: 73 AVFDIIDFEGSFDVEILDILREKDS-----------------IVIVNKLDLIPDEKHPSE 115
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
+WV+ R E+ I+ + + VS +G+ + + + N IG N GKS+
Sbjct: 116 VANWVKDRLAEESIAPLD-IAIVSTKNGYGVNGVFRKIKHFYPEGVNAMVIGVTNVGKSS 174
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP-AQAKLFDTPGLLH 380
++N + A T + PGTT I ++P L+DTPGL+
Sbjct: 175 VINRLLGKKIA---------------TVSKYPGTT--IKNTLNMIPFTNIGLYDTPGLIP 217
Query: 381 PNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV-EESSVESIYVTVWA 439
+ + + + + E+ +T++ K I I L++ + + ++ I+ +++A
Sbjct: 218 EGRASDLVCDNCAQKIIPASEISRKTFKAKHNRMIMIGNLVKFKILNDDEIKPIF-SIYA 276
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
+ + H E + E G P + EE K+ + V+ + ++ ++
Sbjct: 277 AKDVQFHETTIEKS---KELEAGDFFSIPCDCCK-EEYNKYKK----VNKTLTINTGEEL 328
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GL W SV+ +G + + E ++I +R A +
Sbjct: 329 VFKGLAWVSVK-RGPLNIQITLPEEIEISIRKAFI 362
>gi|443719705|gb|ELU09749.1| hypothetical protein CAPTEDRAFT_19738 [Capitella teleta]
Length = 677
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 105/221 (47%), Gaps = 9/221 (4%)
Query: 321 TLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLH 380
T ++A K +D G EE S+L A T G + +DTPGL++
Sbjct: 423 TFISATEKVLDRKIGQTAEE---TSNLISASYSFDTHGGRHAHNESNYKRWCYDTPGLVN 479
Query: 381 PNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWAS 440
P Q+ +LT+EE +V L PRT+ +K + + GL R+D + +SIY T + S
Sbjct: 480 PEQLINKLTQEELAVVLHQSMLVPRTFVLKPKQVMLMGGLGRIDYADGP-KSIYFTAFTS 538
Query: 441 PYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEK-RVEELGKWVRKEFHVSGSSWDSSSVD 498
P +P+ + +A KH G L P+G++ R+ L K+F G W S D
Sbjct: 539 PEIPVRVFDALDADEFYGKHIGTSVLGAPLGDQSRLLRLPSLTAKQFEAVGFGWRESCCD 598
Query: 499 IAAAGLGWFSVRLKGEAALGV--WTYEGVDIVLRN-ALLPY 536
+ + LGW ++ E + + +T G + LR+ +LL Y
Sbjct: 599 LVLSSLGWVAITAGEEMPITLRGYTPAGQGLALRSPSLLKY 639
>gi|421526409|ref|ZP_15973017.1| GTP-binding protein [Fusobacterium nucleatum ChDC F128]
gi|402257487|gb|EJU07961.1| GTP-binding protein [Fusobacterium nucleatum ChDC F128]
Length = 366
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 161/383 (42%), Gaps = 59/383 (15%)
Query: 156 CARCHALRHYGK--VKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
C RC L+HYGK V +T E D+ VG+ L +V+ V D DF+GSF
Sbjct: 35 CQRCFQLKHYGKYSVNKMTRE------DYKKEVGKLLDDVK----LVIAVFDIIDFEGSF 84
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
++ ++ + +++V K+DL+P P+ +WV+ R E+
Sbjct: 85 DVEILDILREKDS-----------------IVIVNKLDLIPDEKHPSEVANWVKDRLAEE 127
Query: 274 GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAG 333
I+ + + VS +G+ + + N IG N GKS+++N + A
Sbjct: 128 SIAPLD-IAIVSTKNGYGVNGVFRKIKHFYPDGVNAMVIGVTNVGKSSVINRLLGKKIA- 185
Query: 334 RGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP-AQAKLFDTPGLLHPNQITTRLTREE 392
T + PGTT I ++P L+DTPGL+ + + +
Sbjct: 186 --------------TVSKYPGTT--IKNTLNMIPFTNIGLYDTPGLIPEGRASDLVCDHC 229
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV-EESSVESIYVTVWASPYLPLHMGKTE 451
+ + E+ +T++ K I I L++ + + ++ I+ +++A+ + H E
Sbjct: 230 AQKIIPASEISRKTFKAKHNRMIMIGNLIKFKILNDDEIKPIF-SIYAAKDVQFHETTIE 288
Query: 452 NACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRL 511
+ E G P E EE K + V + ++ ++ GLGW SV+
Sbjct: 289 KS---KELEMGDFFTIPC-ECCKEEYNKHKK----VDKTLTINTGEELVFKGLGWVSVK- 339
Query: 512 KGEAALGVWTYEGVDIVLRNALL 534
+G + + E ++I +R A +
Sbjct: 340 RGPLNIQITLPEEIEISIRKAFI 362
>gi|348670681|gb|EGZ10502.1| hypothetical protein PHYSODRAFT_518854 [Phytophthora sojae]
Length = 513
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 105/243 (43%), Gaps = 61/243 (25%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+ +Q PK GYF P Q L+ V ++
Sbjct: 6 CSGCGIELQYEEPKQVGYF--PKQLLSNV-----------------------------HD 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
E+K+ + C RC + YGK+ D +P +++ +++M +++ +
Sbjct: 35 LKELKR----LRCERCFQMTQYGKISDTK----MPYQEYE----KRVMELRSKDMLMIQL 82
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD D GS K + G P V+LVV K DL+P+ R
Sbjct: 83 VDILDISGSLLPKARHIF----------------GKKP-VMLVVNKGDLVPTKSGIRRLM 125
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
++Q A++ GI + ++ +SA+K G+K +++DV R ++ +GA N GKST L
Sbjct: 126 RRIKQEAKDAGIDNLISIYLISAMKRIGMKEIVEDVAKYREGR-DICVVGAANVGKSTFL 184
Query: 324 NAI 326
N+
Sbjct: 185 NSF 187
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 96/234 (41%), Gaps = 51/234 (21%)
Query: 346 HLTEAPVPGTTLGIVRVEGVLPAQA-KLFDTPGLLHPNQITTRLTREEQKLVNI------ 398
+T +P+PGTTL + + ++ + + DTPGL+ + QKLV +
Sbjct: 276 EMTTSPLPGTTLAVQHLPVMVRNEVFNILDTPGLITDTK--------RQKLVEVLALDGA 327
Query: 399 --------NKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY--LPLHMG 448
K+L TYR++ G S+ + L R D E ++ + S Y LP H+
Sbjct: 328 AKLKNVFPTKQLPVTTYRVRPGRSLFLGALARFDYETLGNDNDKNMLLLSWYGVLPGHLT 387
Query: 449 KTENACTMVEKHFGRQLQPPIGEKRVEELGKW-VRKEFHVSGSSWDS------------- 494
TE A KH G L PP G + G + + ++ DS
Sbjct: 388 NTERAEDTFVKHAGGILSPPRGLDAMSFTGPLTLSQNVYLKDYVLDSVLTKSKHKKPKRT 447
Query: 495 SSVDIAAAGLGWFSVR---LKGEAA---------LGVWTYEGVDIVLRNALLPY 536
+ V++ G GW SV L G AA + V T G+ +V R+ L PY
Sbjct: 448 TVVELEVPGFGWLSVTAVDLDGTAASQKTLNQGKISVHTCRGLSVVPRSPLFPY 501
>gi|308802972|ref|XP_003078799.1| Predicted GTPases (ISS) [Ostreococcus tauri]
gi|116057252|emb|CAL51679.1| Predicted GTPases (ISS) [Ostreococcus tauri]
Length = 588
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 163/362 (45%), Gaps = 58/362 (16%)
Query: 154 VVCARCHALRHYGKVKDVTVENLL---PDFDFDHTVGRKLMSASGARSVVLMVVDAADFD 210
++CARC L + V V + + P + +L +++V+ VVDA DF
Sbjct: 95 MLCARCAKLSNGAYVNAVEGQGGVKASPGLITPKELRDQLKPIREKKALVVKVVDATDFH 154
Query: 211 GSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRA 270
GSF +KV +V G P +VLVVTKIDLL +++ E WV + A
Sbjct: 155 GSFLKKVRDVV----------------GGNP-IVLVVTKIDLLGNAVDHDALERWVAKEA 197
Query: 271 REDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSV 330
++ + + VS+ + G++ + ++ R +V+ IGA N GKS+ + A + +
Sbjct: 198 ETRRLT-LAGIALVSSRRGSGMREAVLQMMRERNGR-DVYVIGAANVGKSSFIRAAMEEL 255
Query: 331 DAGRGGDGEEKNIVSHLTEAPV----PGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITT 386
+ N + PV PGTTLG++ ++ + LFDTPG+ +++ +
Sbjct: 256 RSA-------GNYFAPTKRLPVASAMPGTTLGVIPLK-AFEGKGVLFDTPGVFLHHRLNS 307
Query: 387 RLTREEQKLVNINKELK-----------PRTYRIKAGHSIHIAGLMRMDVEES------- 428
L+ E+ + + LK P + G+S++ +R+DV E
Sbjct: 308 LLSAEDLSEMKLGSSLKKFVPPTPECAEPPGFASFKGYSLYWGSFVRVDVLECPPNVTFG 367
Query: 429 --SVESIYVTVWASPYLPLHM-GKTENACTMVEK-HF--GRQLQPPIGEKRVEELGKWVR 482
+S V++ + +P + G+ E A +V++ F + P+ + V LG W+R
Sbjct: 368 FFGPKSTRVSLMKTADVPETISGQEEAALRLVQEIDFLPPMHVDGPLVDLSVSGLGGWIR 427
Query: 483 KE 484
E
Sbjct: 428 VE 429
>gi|260494669|ref|ZP_05814799.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 3_1_33]
gi|289764610|ref|ZP_06523988.1| GTP-binding protein [Fusobacterium sp. D11]
gi|423136368|ref|ZP_17124011.1| ribosome biogenesis GTPase YqeH [Fusobacterium nucleatum subsp.
animalis F0419]
gi|260197831|gb|EEW95348.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 3_1_33]
gi|289716165|gb|EFD80177.1| GTP-binding protein [Fusobacterium sp. D11]
gi|371961522|gb|EHO79146.1| ribosome biogenesis GTPase YqeH [Fusobacterium nucleatum subsp.
animalis F0419]
Length = 366
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 177/458 (38%), Gaps = 101/458 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q+T+ GY +P
Sbjct: 5 CVGCGVELQNTDKNLQGYTPKPINT----------------------------------- 29
Query: 144 TSEVKKHEKPVVCARCHALRHYGK--VKDVTVENLLPDFDFDHTVGRKLMSASGARSVVL 201
++ + C RC L+HYGK V +T E D+ + VG+ L +V+
Sbjct: 30 -------KEDMYCQRCFQLKHYGKYSVNKMTRE------DYRNEVGKLLDDVK----LVI 72
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V D DF+GSF ++ ++ + ++VV K+DL+P P+
Sbjct: 73 AVFDIIDFEGSFDVEILDILREKDS-----------------IVVVNKLDLIPDEKHPSE 115
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
+WV+ R E+ I + + VS +G+ + + N IG N GKS+
Sbjct: 116 VANWVKDRLVEESILPL-DIAIVSTKNGYGVNGIFRKIKHFYPDGVNAMVIGVTNVGKSS 174
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP-AQAKLFDTPGLLH 380
++N + A T + PGTT I ++P L+DTPGL+
Sbjct: 175 VINRLLGKKIA---------------TVSKYPGTT--IKNTLNMIPFTNIGLYDTPGLIP 217
Query: 381 PNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV-EESSVESIYVTVWA 439
+ + + + + + E+ +T++ K I I L++ + ++ I+ +++A
Sbjct: 218 EGRASDLVCDNCAQKIIPSGEISRKTFKAKYNRMIMIGNLVKFKILNNEEIKPIF-SIYA 276
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
+ + H E A E G P E + K V+ + ++ ++
Sbjct: 277 AKDVQFHETTIEKA---RELEAGNFFTIP-----CECCKEEYNKHKKVNKTLTINTGEEL 328
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYR 537
GL W SV+ +G + + E +DI +R A + R
Sbjct: 329 VFKGLAWVSVK-RGPLNIQITLPEEIDISIRKAFISPR 365
>gi|344205187|ref|YP_004790329.1| ribosome biogenesis GTPase YqeH [Mycoplasma putrefaciens KS1]
gi|343957110|gb|AEM68825.1| ribosome biogenesis GTPase YqeH [Mycoplasma putrefaciens KS1]
Length = 363
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 158/358 (44%), Gaps = 50/358 (13%)
Query: 156 CARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPR 215
C RC +++Y ++ V+ E + +F FD ++L+ + + V+D D +GS
Sbjct: 30 CLRCFKIKNYNQL--VSNEIAVGEF-FDRI--QRLVDQADEDLIFYYVLDVFDIEGSRIA 84
Query: 216 KVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGI 275
++ K++ V LV+ KIDLLP S+ ++ ++++ + +
Sbjct: 85 EIEKVIKKHT-----------------VKLVINKIDLLPKSVKLSKIKNYISKLFANTSL 127
Query: 276 SKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRG 335
+ L S N + L ++ + + + IGA N GKS+L+N +
Sbjct: 128 NNADILLVSSKTLNLA-EPLFSEIQN--NNQYQQYFIGASNVGKSSLINKML-------- 176
Query: 336 GDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKL 395
E N+ + + TTL + + L A ++D+ G+ N I+ + ++ K
Sbjct: 177 ---ELSNLSPRIVVSNFLNTTLEFICIR--LDANTVIYDSAGITRSNSISNLMDQKFLKY 231
Query: 396 VNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACT 455
+ELK +YR+ + +SI AG+ D + + + ++ + + LH +T NA
Sbjct: 232 CYFKQELKQFSYRLSSNNSIFFAGVAWFDYQSETKTDFH--IYVNKNINLHRTQTNNAID 289
Query: 456 MVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWD-SSSVDIAAAGLGWFSVRLK 512
+K+ + L P I +++ + S + D + DI+ +GLGW + +K
Sbjct: 290 YWKKN-HKVLIPHISSQKIN--------TYQFSFTKNDLNQEFDISISGLGWINFVVK 338
>gi|312379364|gb|EFR25662.1| hypothetical protein AND_08807 [Anopheles darlingi]
Length = 691
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 124/295 (42%), Gaps = 70/295 (23%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+ + PGY PSQ K L H
Sbjct: 200 CGGCGALLHCIDHSIPGYL--PSQLFKGKSKEQLTHT----------------------- 234
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+C RCH L+HY +V+V + D+ L+S +++ L++
Sbjct: 235 -----------ICQRCHFLKHYNVAINVSVSS----EDYIEL----LLSIRSKKALALLL 275
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF S +A ++ N P V++ K+DL+P P E
Sbjct: 276 VDLTDFPCSIWPGMADILGP---------------NRP-VIVAGNKVDLIPRD-CPGYLE 318
Query: 264 H---WVRQRAREDGISK--ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAG 318
+ + Q E G ++ I + +SA +G++ LI + + G RG+V+ +G N G
Sbjct: 319 NVRKCLTQSMIESGFARTNIKHVALISASTGYGIEELITKLHSVWGTRGDVYLVGCTNVG 378
Query: 319 KSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLF 373
KSTL NA+ +S D + + ++V T +P PGTT+ ++ + P+ +L+
Sbjct: 379 KSTLFNALLRS-DLCK---VQATDLVQKATASPWPGTTIRTLKFPILRPSDYRLY 429
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 13/178 (7%)
Query: 368 AQAK-LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVE 426
AQ+K +DTPG++HP QI LT EE + + ++PR Y ++ G ++ +AGL R+D
Sbjct: 498 AQSKWCYDTPGVVHPAQILDLLTTEEILMALAKRTIRPRAYLLRKGMTLFLAGLGRLDYL 557
Query: 427 ESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQP-PIGEKRVEELGKW----V 481
+ ES+ V V+A+P LP + T +A + G L P G + E L +W
Sbjct: 558 DGP-ESVRVMVYAAPTLPTLITYTTDAGELYSDLLGSPLLAVPFGSE--ERLKRWPELRA 614
Query: 482 RKEFHVSGSSWDS-SSVDIAAAGLGWFSVRL--KGEAALGVWTYEGVDIVLRN-ALLP 535
+ + G+S ++ DI + GW +V L + EA WT + + R +LLP
Sbjct: 615 SPDILLHGTSAKHIAAGDIVLSSAGWVAVHLPMQSEATFRAWTPDRRGVCTRQPSLLP 672
>gi|403222202|dbj|BAM40334.1| conserved hypothetical protein [Theileria orientalis strain
Shintoku]
Length = 796
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 8/205 (3%)
Query: 333 GRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREE 392
G G ++K + + +T + VPGTTLG++ + L K++DTPG+ PN + L ++
Sbjct: 587 GIGSGDDKKALSTKVTSSIVPGTTLGVLGIR--LGMGLKVYDTPGIFIPNSFISYLDNDQ 644
Query: 393 QKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTEN 452
K V IN ++ RI G ++ I R+DV ++ +V + S L L + KT
Sbjct: 645 LKEVIINNTCSNKSIRITKGQTLLIDKYARIDV--TAGRDFFVKCYLSDKLKLFVKKTHR 702
Query: 453 ACTMVEKHF-GRQLQPPIGEKRVEEL-GKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVR 510
+E+ F QL P + ++ K+F++ S WDS++ D+ GLG+ ++
Sbjct: 703 VPRFLEREFPNAQLWYP--KASLDSCTADTTPKKFNIVLSGWDSATCDLCIKGLGFLTLG 760
Query: 511 LKGEAALGVWTYEGVDIVLRNALLP 535
+ T + +++ LR + P
Sbjct: 761 GALRILFDLHTRDSIELSLRTPMFP 785
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 242 RVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHF-VSAVKNWGLKSLIDDVV 300
+V L V KIDLLP ++ + I TK F +S N + SL++ ++
Sbjct: 425 KVYLAVNKIDLLPRYKREDLVVYFRNMVNSKVDIGLRTKNIFPISCKYNTNVDSLLNVIL 484
Query: 301 DLAGKRGN-VWAIGAQNAGKSTLLNAIAKSVDAGR 334
A K GN V IG N+GKSTL+NAI ++ R
Sbjct: 485 SEAKKLGNQVLFIGPTNSGKSTLINAIHTILNTHR 519
>gi|261328751|emb|CBH11729.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 854
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 125/530 (23%), Positives = 203/530 (38%), Gaps = 113/530 (21%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANE-----SEFSNSLKKGGLVV 137
C GCG L+QD + GY + + K + E SE +K G V
Sbjct: 306 CCRGCGALLQDQDENSFGYVRKGDVERYIIEKQQKMRARAEYADRMSELQAHWRKHGRRV 365
Query: 138 FE-------AENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKL 190
E E + + P VC RCHAL + G + + PDF KL
Sbjct: 366 GEEWLDFMTQEEFDAFYRDRNAPFVCHRCHALENLGMEGRRRIWSA-PDFT------DKL 418
Query: 191 MSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKI 250
+ + VV++VVD DF G+ + ++S + V++ V K+
Sbjct: 419 RALREKKCVVVLVVDVTDFPGTMVYDLPGLISMNND----------------VIIAVNKM 462
Query: 251 DLL--------------PSSLSPTRF-EHWVRQRAREDGISK--ITKLHFVSAVKNWGLK 293
D + + L R+ WV A + G+ + I + +SA + W ++
Sbjct: 463 DCVRNRSFNYRGKDRAVAACLVTERYVRRWVTGIAVQFGLPRHQIKDVIPLSAKRGWNVE 522
Query: 294 SLI---DDVVDLAGKRGN----VWAIGAQNAGKSTLLNAIA--------------KSVDA 332
+LI ++ +L +R + +G N GKS+++NAIA K
Sbjct: 523 ALIAAVEEASNLNLRRPTKPIPTYFVGVANVGKSSVINAIAHKLYVPLPPHPESRKVYYT 582
Query: 333 GRGGDGEE-------------------------KNIVSHLTEAPVPGTTLGIVRV----- 362
+ DG E K +T + +PGTT+ V V
Sbjct: 583 KKAPDGSESVFWRWYTPPNVNQAEMIDIPSRHDKKASKLVTTSSLPGTTVDAVAVRVSLS 642
Query: 363 EGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMR 422
+G +A LFDTPGLL + LT + + I K P+ + + G+++ + GL
Sbjct: 643 KGAEKGRAHLFDTPGLLPHWHRHSPLTLLQMRRTLIRKFRNPQCFILVPGNTLFLGGLCA 702
Query: 423 MDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPP-----IGEKRVEEL 477
+DV + + + V+ S + + T+ + + GR L PP +G+ R+ E
Sbjct: 703 VDVVKGTSRGMLFMVYTSQKVRNAIINTDRSDEFWREQLGRALDPPGSVEQVGDLRLTES 762
Query: 478 GKWVRKEFHVSGSSWDSSSVDIAAAGLGW--FSVRLKGEAALGVWTYEGV 525
++ F + DI GLGW F V + L V T GV
Sbjct: 763 RSYL---FECYQRNRKRPKADIYFCGLGWVAFCVNEPADVVLRVRTLPGV 809
>gi|158299358|ref|XP_319462.4| AGAP010271-PA [Anopheles gambiae str. PEST]
gi|157014326|gb|EAA13944.4| AGAP010271-PA [Anopheles gambiae str. PEST]
Length = 596
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 131/310 (42%), Gaps = 75/310 (24%)
Query: 72 GNYDEATPKLTV-CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSL 130
G D P T+ C GCG L+ P PGY P Q K L+
Sbjct: 78 GTPDPNEPASTIPCGGCGALLHCIEPSIPGYL--PGQLFKGKSKEQLLTTN--------- 126
Query: 131 KKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKL 190
C RCH L+HY +VTV + +G L
Sbjct: 127 -------------------------CQRCHFLKHYNVAVNVTVSA-------NDYIG-IL 153
Query: 191 MSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVV-TK 249
S +++ +++VD DF S +++++ V R ++VV K
Sbjct: 154 SSIKTKKALAVLLVDVLDFPCSIWPGLSEILG-----------------VQRPIIVVGNK 196
Query: 250 IDLLPSSLSPTRFEHWVRQ----RAREDGISK--ITKLHFVSAVKNWGLKSLIDDVVDLA 303
+DLLP S E+ VRQ E G S+ I + +SA +G++ LI + ++
Sbjct: 197 VDLLPQD-SAGYLEN-VRQCLTRSVIESGFSRNNIKHVSLISASTGYGVEELITKIHNVW 254
Query: 304 GKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVE 363
G RG+V+ +G N GKSTL NA+ +S D + + +++ T +P PGTT+ +++
Sbjct: 255 GTRGDVYLVGCTNVGKSTLFNALLRS-DLCK---VQATDLIQKATASPWPGTTIRMLKFP 310
Query: 364 GVLPAQAKLF 373
+ P+ +LF
Sbjct: 311 ILRPSDHRLF 320
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 116/232 (50%), Gaps = 15/232 (6%)
Query: 313 GAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKL 372
+++ ++TLL I + + +G + + V+ ++AP+P TL + E + ++
Sbjct: 346 ATKDSKQATLLGHIGLTFEKEKGELFDHFS-VTQRSDAPLPIFTLN-EKNEKYINSKW-C 402
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES 432
+DTPG++ P+QI LT EE L + ++PR Y +K G ++ + GL R+D + +S
Sbjct: 403 YDTPGVVQPDQILDLLTTEEIVLTVPKQTIRPRIYLLKRGMTLLLGGLGRLDFVDGP-DS 461
Query: 433 IYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEKRVEELGKWVRKE----FHV 487
I V ++AS LP + +T +A + E G + L P G + E L K+ E V
Sbjct: 462 IRVILYASNMLPTIICQTLDAPALYEALLGTEFLAVPFGSQ--ERLEKFPALECVPNILV 519
Query: 488 SGSSWDSSSV-DIAAAGLGWFSVRL--KGEAALGVWTYEGVDIVLRN-ALLP 535
G+ +V DI + GW V L EA WT + + +R ALLP
Sbjct: 520 HGTLEKHLTVCDILLSSAGWIGVNLPKNSEAIFHAWTPKKRGVYIRQPALLP 571
>gi|72390111|ref|XP_845350.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|72390123|ref|XP_845356.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62360448|gb|AAX80862.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|62360453|gb|AAX80867.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70801885|gb|AAZ11791.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70801891|gb|AAZ11797.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 924
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 125/530 (23%), Positives = 203/530 (38%), Gaps = 113/530 (21%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANE-----SEFSNSLKKGGLVV 137
C GCG L+QD + GY + + K + E SE +K G V
Sbjct: 306 CCRGCGALLQDQDENSFGYVRKGDVERYIIEKQQKMRARAEYADRMSELQAHWRKHGRRV 365
Query: 138 FE-------AENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKL 190
E E + + P VC RCHAL + G + + PDF KL
Sbjct: 366 GEEWLDFMTQEEFDAFYRDRNAPFVCHRCHALENLGVEGRRRIWSA-PDFT------DKL 418
Query: 191 MSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKI 250
+ + VV++VVD DF G+ + ++S + V++ V K+
Sbjct: 419 RALREKKCVVVLVVDVTDFPGTMVYDLPGLISMNND----------------VIIAVNKM 462
Query: 251 DLL--------------PSSLSPTRF-EHWVRQRAREDGISK--ITKLHFVSAVKNWGLK 293
D + + L R+ WV A + G+ + I + +SA + W ++
Sbjct: 463 DCVRNRSFNYRGKDRAVAACLVTERYVRRWVTGIAVQFGLPRHQIKDVIPLSAKRGWNVE 522
Query: 294 SLI---DDVVDLAGKRGN----VWAIGAQNAGKSTLLNAIA--------------KSVDA 332
+LI ++ +L +R + +G N GKS+++NAIA K
Sbjct: 523 ALIAAVEEASNLNLRRPTKPIPTYFVGVANVGKSSVINAIAHKLYVPLPPHPESRKVYYT 582
Query: 333 GRGGDGEE-------------------------KNIVSHLTEAPVPGTTLGIVRV----- 362
+ DG E K +T + +PGTT+ V V
Sbjct: 583 KKAPDGSESVFWRWYTPPNVNQAEMIDIPSRHDKKASKLVTTSSLPGTTVDAVAVRVSLS 642
Query: 363 EGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMR 422
+G +A LFDTPGLL + LT + + I K P+ + + G+++ + GL
Sbjct: 643 KGAEKGRAHLFDTPGLLPHWHRHSPLTLLQMRRTLIRKFRNPQCFILVPGNTLFLGGLCA 702
Query: 423 MDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPP-----IGEKRVEEL 477
+DV + + + V+ S + + T+ + + GR L PP +G+ R+ E
Sbjct: 703 VDVVKGTSRGMLFMVYTSQKVRNAIINTDRSDEFWREQLGRALDPPGSVEQVGDLRLTES 762
Query: 478 GKWVRKEFHVSGSSWDSSSVDIAAAGLGW--FSVRLKGEAALGVWTYEGV 525
++ F + DI GLGW F V + L V T GV
Sbjct: 763 RSYL---FECYQRNRKRPKADIYFCGLGWVAFCVNEPADVVLRVRTLPGV 809
>gi|442762765|gb|JAA73541.1| Hypothetical protein, partial [Ixodes ricinus]
Length = 212
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 6/174 (3%)
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMD-VEESSVE 431
+DTPG ++ +QI LT EE V + + PRT ++ +++++GL R+D ++
Sbjct: 33 YDTPGAVYRDQILDILTLEELLKVLPKEIITPRTVLLRLNQTLYLSGLARVDLLQVPRSR 92
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGE-KRVEELGKWVRKEFHVSG 489
IY TV+ASP LP+H+ T +A H G + L P+G KR+ + KE G
Sbjct: 93 HIYATVFASPQLPIHIVDTPDAEEFYRSHLGTEMLGVPLGSAKRLVDFPVLEGKELTYVG 152
Query: 490 SSWDSSSVDIAAAGLGWFSVRLKG--EAALGVWTYEGVDIVLR-NALLPYRSQV 540
W SS D+ + GW S EA + WT EG I R A+LP Q+
Sbjct: 153 QGWKSSCGDVVLSSAGWISFTFNNDEEATVRAWTPEGRGIHRRVPAMLPEAVQL 206
>gi|422338012|ref|ZP_16418972.1| ribosome biogenesis GTPase YqeH [Fusobacterium nucleatum subsp.
polymorphum F0401]
gi|355372650|gb|EHG19989.1| ribosome biogenesis GTPase YqeH [Fusobacterium nucleatum subsp.
polymorphum F0401]
Length = 366
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 178/455 (39%), Gaps = 101/455 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q+T+ GY +P
Sbjct: 5 CVGCGVELQNTDKNLQGYTPKPINT----------------------------------- 29
Query: 144 TSEVKKHEKPVVCARCHALRHYGK--VKDVTVENLLPDFDFDHTVGRKLMSASGARSVVL 201
++ + C RC L+HYGK V +T E D+ VG+ L +V+
Sbjct: 30 -------KEDMYCQRCFQLKHYGKYSVNKMTRE------DYKKEVGKLLDDVK----LVI 72
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V D DF+GSF ++ ++ + +++V K+DL+P P+
Sbjct: 73 AVFDIIDFEGSFDVEILDILREKDS-----------------IVIVNKLDLIPDEKHPSE 115
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
+WV+ R E+ I+ + + VS +G+ + + N IG N GKS+
Sbjct: 116 VANWVKDRLAEESIAPLD-IAIVSTKNGYGVNGVFRKIKHFYPDGVNAMVIGVTNVGKSS 174
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP-AQAKLFDTPGLLH 380
++N + A T + PGTT I ++P L+DTPGL+
Sbjct: 175 VINRLLGKKIA---------------TVSKYPGTT--IKNTLNMIPFTNIGLYDTPGLIP 217
Query: 381 PNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV-EESSVESIYVTVWA 439
+ + + + + E+ +T++ K I I L++ + + ++ I+ +++A
Sbjct: 218 EGRASDLVCDNCAQKIIPASEISRKTFKAKHNRMIMIGNLVKFKILNDDEIKPIF-SIYA 276
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
+ + H E A E G P + EE K + V+ + ++ ++
Sbjct: 277 AKDVQFHETTIEKA---KELEAGNFFTIPCDCCK-EEYNKHKK----VNKTLTINTGEEL 328
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GL W SV+ +G + + E ++I +R A +
Sbjct: 329 VFKGLAWVSVK-RGPLNIQITLPEEIEISIRKAFI 362
>gi|288574881|ref|ZP_06393238.1| GTPase-like protein [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570622|gb|EFC92179.1| GTPase-like protein [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 378
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 172/461 (37%), Gaps = 110/461 (23%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
CPGCG Q +P GY
Sbjct: 9 CPGCGARFQRNDPDGAGYL----------------------------------------- 27
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
E K + V+C RC ++HYG K +++ D ++ + + S + +V
Sbjct: 28 -PEGKDPDGNVICKRCFQMKHYGVFKKASIK--------DSSIKKDISREVSGCSAIFLV 78
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD F+ S V+D N P V +V+ K D+L ++P
Sbjct: 79 VDICQFEIS--SSALDWVADL--------------NKP-VFVVINKCDVLSKWITPGEIA 121
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W +R + +++ +SA+ ++ L + + D + +G N GKSTLL
Sbjct: 122 SWASERLP----VPLHRVYPLSALNRKSVRDLRNRIEDAFPPGSKILLLGTTNVGKSTLL 177
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
+ + G++ +S L PGTTLGI +V+ A + D PGL N
Sbjct: 178 SGLT----------GDDTPTISRL-----PGTTLGITQVKSRHSAITYV-DVPGLKEVNP 221
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES-IYVTVWASPY 442
+L + + K+L+ + +K G S+ + + V+++ I V +A+
Sbjct: 222 WLGKLCADCLTGLIPQKKLQSYSTVLKPGQSLSLGAIGWFVVDDAGERGWIKVEAFAADE 281
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPI--------GEKRVEELGKWVRKEFHVSGSSWDS 494
+ H + ++ + P G VE R++FHV
Sbjct: 282 MIFHRTTEDRLHELLAPYREDLFSLPCSSCWASLEGPDYVE-----YREDFHV------- 329
Query: 495 SSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLP 535
+DI G GWFSVR G + +G+ +LR AL+P
Sbjct: 330 -GLDIVLPGCGWFSVR-SGYGNGRFYLPKGISPILRPALVP 368
>gi|224139766|ref|XP_002323266.1| predicted protein [Populus trichocarpa]
gi|222867896|gb|EEF05027.1| predicted protein [Populus trichocarpa]
Length = 176
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 92/186 (49%), Gaps = 45/186 (24%)
Query: 277 KITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGG 336
K+ KL V + K+ G+++L + ++AG RGNVW I AQNAG+STL+NA+ K GG
Sbjct: 29 KLPKLVLVGS-KDVGVRNLSSFIEEVAGPRGNVWVIRAQNAGESTLINALKK------GG 81
Query: 337 DGEEKNIVSHLTEAPVPGTTLGI--VRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQK 394
V+ LTEA VPGTTLGI V VE + LF
Sbjct: 82 AR-----VTKLTEASVPGTTLGISAVYVEDPVIVPRALF--------------------- 115
Query: 395 LVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENAC 454
E T ++ G ++ +A + +SV++IYV VWASP LH G+ ENA
Sbjct: 116 ------EFLRATDLLQEGQAVLVAA----RPQSTSVQTIYVIVWASPNFSLHTGEIENAD 165
Query: 455 TMVEKH 460
+ H
Sbjct: 166 EFWKNH 171
>gi|307196380|gb|EFN77969.1| Uncharacterized protein C4orf14-like protein [Harpegnathos
saltator]
Length = 621
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 128/313 (40%), Gaps = 78/313 (24%)
Query: 72 GNYDEATPKLTV----CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFS 127
GNY P TV C GCG L+ + PGY PS+ K + L
Sbjct: 101 GNYGTPDPDSTVSSVPCGGCGALLHCKDHAIPGYL--PSELFLKRSERKL---------- 148
Query: 128 NSLKKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVG 187
+ ++C RCH +++Y + +V V PD
Sbjct: 149 ------------------------RLMICQRCHFMKYYNAMLEVKVS---PD-----EFA 176
Query: 188 RKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVV 247
L + V+++VD DF S W E KS P ++ V
Sbjct: 177 ELLKVIKTKKCAVILMVDLTDFPCSI------------------WPEIKSVLHPYTMVFV 218
Query: 248 T--KIDLLPSSLSPTRFEH---WVRQRAREDGISK--ITKLHFVSAVKNWGLKSLIDDVV 300
KIDLLP SP F H + + GI+K I + VSA +G++ LI+ +
Sbjct: 219 VGNKIDLLPQD-SPEFFTHVKDCLLKTVENTGINKNFIKYVGLVSAKTGYGIEQLINKLH 277
Query: 301 DLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIV 360
L +G+V+ IG N GKS+L N + +S D + + +++ T +P PGTTL ++
Sbjct: 278 ALWKYKGDVYVIGCTNVGKSSLFNVLLQS-DYCK---VQAADLIQRATISPWPGTTLNLL 333
Query: 361 RVEGVLPAQAKLF 373
+ + P + +L+
Sbjct: 334 KFPILNPQRWRLY 346
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 9/172 (5%)
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES 432
+DTPG + P+Q+ LT E V K + PRT+ + SI +AG+ R+D + +
Sbjct: 430 YDTPGTIQPDQVLDLLTTVELLSVLPKKIIAPRTFILYPDQSIFLAGIGRLDYLKGNY-F 488
Query: 433 IYVTVWASPYLPLHMGKTENACTMVEKHFGRQ--LQPPIGEKRVEELGKWVRKEFHVSGS 490
I T++AS LP+ + + +A + + + + P R++ KE V G
Sbjct: 489 IRCTIFASNELPITITLSADADEIYNELLNTEAFVVPENNPDRLKYWPALGSKEMEVIGI 548
Query: 491 SWDSSSVDIAAAGLGWFSVRLKGE----AALGVWTYEGVDIVLRNALLPYRS 538
+ S D+ + GW ++ GE +L W+ +G + LR L +S
Sbjct: 549 GKNMSVADVVISSAGWMAI--SGEHGDHVSLRAWSPQGRGLHLRTPALLRKS 598
>gi|195429551|ref|XP_002062821.1| GK19491 [Drosophila willistoni]
gi|194158906|gb|EDW73807.1| GK19491 [Drosophila willistoni]
Length = 644
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 131/311 (42%), Gaps = 74/311 (23%)
Query: 71 DGNYDEATPKLTV-CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNS 129
DG+ D++ +V C GCG + N +PGY PS+
Sbjct: 113 DGSEDKSIASSSVPCSGCGAHLHCHNSSYPGYI--PSE---------------------- 148
Query: 130 LKKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRK 189
+F+ ET + +VC RCH L+HY DV V P + T+ R
Sbjct: 149 -------IFKGRTET-----ELRTIVCKRCHFLKHYNLALDVEV----PSSSYVDTISR- 191
Query: 190 LMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTK 249
+ A ++VL VD DF S + +++ G+ V LV K
Sbjct: 192 -IQDKFALAIVL--VDLLDFPSSIWPGMLRVL----------------GSKRPVFLVGNK 232
Query: 250 IDLLPSSLSPTRFEHWVRQRAREDGIS-------KITKLHFVSAVKNWGLKSLIDDVVDL 302
+DLLP S + H VR ++ I I + +SA +G++ LI + +
Sbjct: 233 VDLLPRD-SNSYMNH-VRSCLTQEFIKHGGGQGMNIKHVSLISAKTGYGIEELITQLHKI 290
Query: 303 AGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRV 362
+G+V+ +G N GKSTL N + S D R E ++V+ T P PGTTL ++R
Sbjct: 291 WAYKGDVYLLGCTNVGKSTLFNILLNS-DYCR---PEASDLVAKATTCPWPGTTLKLLRF 346
Query: 363 EGVLPAQAKLF 373
+ P+ +++
Sbjct: 347 PILRPSDLRVY 357
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 23/214 (10%)
Query: 342 NIVSHLTEAPVPGTTLGIVRVEGVLPAQAK-LFDTPGLLHPNQITTRLTREEQKLVNINK 400
N V ++ P TTL R E +A+ ++DTPG++ P+Q+T LT EE L+ K
Sbjct: 408 NDVFAMSSGVKPVTTLNERRAEY---REARWVYDTPGVMQPDQLTPLLTTEELTLLQPKK 464
Query: 401 ELKPRTYRIKAGHSIHIAGLMRMDV-----EESSVESIYVTVWASPYLPLHMGKTENACT 455
++PR +R++ S+ + GL R D+ +E +E + V V+AS LPL + T +A T
Sbjct: 465 MIRPRAFRVRPNMSLMLGGLARFDLLDCLSDERQLEYLKVIVFASEELPLLIVDTAHAET 524
Query: 456 MVEKHFGRQL--QPPIGEK--RVEELGKWVRKEFHVSGSSWDSS-------SVDIAAAGL 504
+ +++ G +L P G+ E + +W + + +S S DI +
Sbjct: 525 VYQRYLGTELLGLPISGQDAGDAERIKRWPGLQCQDTDIVITNSERNVGKLSCDITLSSA 584
Query: 505 GWFSVRL--KGEAALGVWTYEGVDIVLRN-ALLP 535
GW + + E L WT + +R AL+P
Sbjct: 585 GWIGLLMPSNSECLLRAWTPLAAGVYVRKPALVP 618
>gi|421145311|ref|ZP_15605194.1| GTP-binding protein [Fusobacterium nucleatum subsp. fusiforme ATCC
51190]
gi|395488292|gb|EJG09164.1| GTP-binding protein [Fusobacterium nucleatum subsp. fusiforme ATCC
51190]
Length = 366
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 179/455 (39%), Gaps = 101/455 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q+T+ GY +P
Sbjct: 5 CVGCGVELQNTDKNLQGYTPKPINT----------------------------------- 29
Query: 144 TSEVKKHEKPVVCARCHALRHYGK--VKDVTVENLLPDFDFDHTVGRKLMSASGARSVVL 201
++ + C RC L+HYGK V +T E D+ VG+ L +V+
Sbjct: 30 -------KEDMYCQRCFQLKHYGKYAVNKMTRE------DYKKEVGKLLDDVK----LVI 72
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V D DF+GSF ++ ++ + +++V K+DL+P P+
Sbjct: 73 AVFDIIDFEGSFDVEILDILREKDS-----------------IVIVNKLDLIPDEKHPSE 115
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
+WV+ R E+ I + + VS +G+ + + N IG N GKS+
Sbjct: 116 VANWVKDRLAEESIVPL-DIAIVSTKNGYGVNGVFRKIKHFYPDGVNAMVIGVTNVGKSS 174
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP-AQAKLFDTPGLLH 380
++N + K IV T + PGTT I ++P L+DTPGL+
Sbjct: 175 VINRLLG------------KKIV---TVSKYPGTT--IKNTLNMIPFTNIGLYDTPGLIP 217
Query: 381 PNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV-EESSVESIYVTVWA 439
+ + + + + + E+ +T++ K I I L++ + ++ I+ +++A
Sbjct: 218 EGRASDLVCDNCAQKIIPSGEISRKTFKAKHNRMIMIGNLVKFKILNNDEIKPIF-SIYA 276
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
+ + H E A E G P + EE K + V+ + ++ ++
Sbjct: 277 AKDVQFHETTIEKA---KELEAGNFFTIPCDCCK-EEYNKHKK----VNKTLTINTGEEL 328
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GL W SV+ +G + + E ++I +R A +
Sbjct: 329 VFKGLAWVSVK-RGPLNIQITLPEEIEISIRKAFI 362
>gi|237742004|ref|ZP_04572485.1| GTP-binding protein [Fusobacterium sp. 4_1_13]
gi|229429652|gb|EEO39864.1| GTP-binding protein [Fusobacterium sp. 4_1_13]
Length = 366
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 175/455 (38%), Gaps = 101/455 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q+T+ GY +P
Sbjct: 5 CVGCGVELQNTDKNLQGYTPKPINT----------------------------------- 29
Query: 144 TSEVKKHEKPVVCARCHALRHYGK--VKDVTVENLLPDFDFDHTVGRKLMSASGARSVVL 201
++ + C RC L+HYGK V +T E D+ VG+ L +V+
Sbjct: 30 -------KEDIYCQRCFQLKHYGKYAVNKMTRE------DYKKEVGKLLDDVK----LVI 72
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V D DF+GSF ++ ++ + ++VV K+DL+P P+
Sbjct: 73 AVFDIIDFEGSFDVEILDILREKDS-----------------IVVVNKLDLIPDEKHPSE 115
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
+WV+ R E+ I+ + + VS +G+ + + N IG N GKS+
Sbjct: 116 VANWVKDRLAEESIAPLD-IAIVSTKNGYGVNGVFRKIKHFYPDGVNSMVIGVTNVGKSS 174
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP-AQAKLFDTPGLLH 380
++N + A T + PGTT I ++P L+DTPGL+
Sbjct: 175 VINRLLGKKIA---------------TVSKYPGTT--IKNTLNMIPFTNIGLYDTPGLIP 217
Query: 381 PNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV-EESSVESIYVTVWA 439
+ + + + + + E+ +T++ K I I L++ + ++ I+ +++A
Sbjct: 218 DGRASDLVCDNCAQKIIPSGEISRKTFKAKYNRMIMIGNLVKFKILNNEEIKPIF-SIYA 276
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
+ + H E A E G P E + K V+ ++ ++
Sbjct: 277 AKDVQFHETTIEKA---KELEAGNFFTIP-----CECCKEEYNKHKKVNKILTINTGEEL 328
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GL W SV+ +G + + E ++I +R A +
Sbjct: 329 VFKGLAWVSVK-RGPLNIQITLPEEIEISIRKAFI 362
>gi|449674982|ref|XP_002162076.2| PREDICTED: nitric oxide-associated protein 1-like [Hydra
magnipapillata]
Length = 666
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 90/187 (48%), Gaps = 19/187 (10%)
Query: 369 QAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEE- 427
Q ++DTPG+ + +Q+ LT EE + + PRT+ ++ G + I GL R+D
Sbjct: 381 QCFIYDTPGVYNSSQLLQFLTVEEMHKLYPELWIVPRTFLLQPGSCLFIGGLARLDYNSI 440
Query: 428 -------------SSVESIYVTVWASPYLPLHMGKTENACTMVEKHF-GRQLQPPIG-EK 472
S ESI+VTV SP +P H E+A EK F L+ PIG E
Sbjct: 441 SKIESDSANIQLAKSAESIFVTVMMSPSVPCHPTVIESADVKYEKLFVNNVLEVPIGNEL 500
Query: 473 RVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVR--LKGEAALGVWTYEGVDIVLR 530
R +E + + K + V G + + ++ D+ GLGW SV + L + T G+ LR
Sbjct: 501 RYKEFPRLLPKTYQVIGKNLNINACDLVLHGLGWLSVASVFNTKVELTLHTPNGIGQELR 560
Query: 531 NA-LLPY 536
LLPY
Sbjct: 561 EKPLLPY 567
>gi|34763137|ref|ZP_00144106.1| GTP-binding protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|27887200|gb|EAA24302.1| GTP-binding protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
Length = 366
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 177/455 (38%), Gaps = 101/455 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q+T+ GY +P
Sbjct: 5 CVGCGVELQNTDKNLQGYTPKPINT----------------------------------- 29
Query: 144 TSEVKKHEKPVVCARCHALRHYGK--VKDVTVENLLPDFDFDHTVGRKLMSASGARSVVL 201
++ + C RC L+HYGK V +T E D+ VG+ L +V+
Sbjct: 30 -------KEDMYCQRCFQLKHYGKYAVNKMTRE------DYKKEVGKLLDDVK----LVI 72
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V D DF+GSF ++ ++ + +++V K+DL+P P+
Sbjct: 73 AVFDIIDFEGSFDVEILDILREKDS-----------------IVIVNKLDLIPDEKHPSE 115
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
+W++ R E+ I + + VS +G+ + + N IG N GKS+
Sbjct: 116 VANWIKDRLAEESIVPLD-IAIVSTKNGYGVNGVFRKIKHFYPDGVNAMVIGVTNVGKSS 174
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP-AQAKLFDTPGLLH 380
++N + A T + PGTT I ++P L+DTPGL+
Sbjct: 175 VINRLLGKKIA---------------TVSKYPGTT--IKNTLNMIPFTNIGLYDTPGLIP 217
Query: 381 PNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV-EESSVESIYVTVWA 439
+ + + + + + E+ +T++ K I I L++ + ++ I+ +++A
Sbjct: 218 DGRASDLVCDNCAQKIIPSGEISRKTFKAKYNRMIMIGNLVKFKILNNEEIKPIF-SIYA 276
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
+ + H E A E G P E EE K + V+ + ++ ++
Sbjct: 277 AKDVQFHETTIEKA---KELEAGNFFTIPC-ECCKEEYNKHKK----VNKTLTINTGEEL 328
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GL W SV+ +G + + E ++I +R A +
Sbjct: 329 VFKGLAWVSVK-RGPLNIQITLPEEIEISIRKAFI 362
>gi|296328240|ref|ZP_06870770.1| ribosome biogenesis GTPase YqeH [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296154640|gb|EFG95427.1| ribosome biogenesis GTPase YqeH [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 366
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 178/455 (39%), Gaps = 101/455 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q+T+ GY +P + EN
Sbjct: 5 CVGCGVELQNTDKNLQGYTPKP-------------------------------INTKEN- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGK--VKDVTVENLLPDFDFDHTVGRKLMSASGARSVVL 201
+ C RC L+HYGK V +T E D+ VG+ L +V+
Sbjct: 33 ----------MYCQRCFQLKHYGKYSVNKMTRE------DYKKEVGKLLDDVK----LVI 72
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V D DF+GSF ++ ++ + +++V K+DL+P P+
Sbjct: 73 AVFDIIDFEGSFDVEILDILREKDS-----------------IVIVNKLDLIPDEKHPSE 115
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
+WV+ R E+ I + + VS +G+ + + N IG N GKS+
Sbjct: 116 VANWVKNRLAEESIVPL-DIAIVSTKNGYGVNGVFRKIKHFYPDGVNAMVIGVTNVGKSS 174
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP-AQAKLFDTPGLLH 380
++N + A T + PGTT I ++P L+DTPGL+
Sbjct: 175 VINRLLGKKIA---------------TVSKYPGTT--IKNTLNMIPFTNIGLYDTPGLIP 217
Query: 381 PNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV-EESSVESIYVTVWA 439
+ + + + + + E+ +T++ K I I L++ + ++ I+ +++A
Sbjct: 218 EGRASDLVCDNCAQKIIPSGEISRKTFKAKHNRMIMIGNLVKFKILNNDEIKPIF-SIYA 276
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
+ + H E + E G P + EE K + ++ + ++ ++
Sbjct: 277 AKGVQFHETTIEKS---KELELGNFFTIPCDCCK-EEYNKHKK----INKTLTINTGEEL 328
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GL W SV+ +G + V E ++I +R A +
Sbjct: 329 VFKGLAWVSVK-RGPLNIQVTLPEEIEISVRKAFI 362
>gi|154341557|ref|XP_001566730.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064055|emb|CAM40246.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 934
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 129/580 (22%), Positives = 213/580 (36%), Gaps = 142/580 (24%)
Query: 64 SSLALTRDGNYDEATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKV----RKSHLVH 119
+SL + ++ P C GCG L+Q+++ GY +RP + V K+ L H
Sbjct: 277 ASLVMEAPSSFHVPVPGRDCCTGCGALLQNSSEDTFGY-VRPGEIEKYVAQRNEKALLRH 335
Query: 120 --VANESEFSNSLKKGGLVVFE-------AENETSEVKKHEKPVVCARCHALRHYGKVKD 170
A +E +K G V E E + + +P C RCHAL + G
Sbjct: 336 EYAARMAELQAHWEKHGRQVGEEWLDFMTQEEFDAFYRDRPRPFTCHRCHALENLGVEGR 395
Query: 171 VTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENER 230
V + PDF +L + + VV++VVD DF GS + ++
Sbjct: 396 RKVWS-APDFT------DQLRALKEKKCVVVLVVDITDFPGSMVYDLPGLI--------- 439
Query: 231 AWKEGKSGNVPRVVLVVTKIDLLPSS---------------LSPTRFEHWVRQRAREDGI 275
S N P V++ V K+D + + +S + WV A + G+
Sbjct: 440 ------SMNNP-VIIAVNKMDCIRNRSFNYAGKDRSVAACLVSESYVRRWVLDIAVQFGL 492
Query: 276 S--KITKLHFVSAVKNWGLKSL---IDDVVDLAGKRGN----VWAIGAQNAGKSTLLNAI 326
+I ++ VSA + WG+ L I+D +L +R + + +G N GKS+++NA+
Sbjct: 493 PQHQIKRVVPVSAKRGWGITPLISAIEDAANLNLRRPHQPLPTYFVGVANVGKSSVINAM 552
Query: 327 AKSV-------DAGR-------GGDGEE-------------------------KNIVSHL 347
A ++ A R +G+E K +
Sbjct: 553 AHALYVPQPPHPASRKVYYTKTDAEGKEAVFWRWYTPPNVNQAEMLDIRGRHDKKASKLM 612
Query: 348 TEAPVPGTTLGI--VRV--------------------------EGVLPAQAKLFDTPGLL 379
T + +PGTT+ + VR+ E + Q ++DTPGLL
Sbjct: 613 TVSSLPGTTVAVNAVRLSIGPTAQTVKQEHQRLSEGAAVLGRAEELAKTQTYIYDTPGLL 672
Query: 380 HPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWA 439
+ LT + + I P+ + + GH++ + GL +DV + V+
Sbjct: 673 PHWHQRSLLTLLQMRRTLIRTFRNPQCFLLLPGHTLFLGGLAAVDVVRGPSRGLLFLVYT 732
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKE------------FHV 487
S + + T + G+ L PP +++ L F
Sbjct: 733 SQKVRNAIVNTVQSDAFWRAQLGKALDPPGSYEQLLTLDDLSSAAGPPGLSETRSYLFEC 792
Query: 488 SGSSWDSSSVDIAAAGLGW--FSVRLKGEAALGVWTYEGV 525
G D+ GLGW F V + L V T GV
Sbjct: 793 YGRHRRRPKADLYVCGLGWTSFCVSEPADVVLRVRTLPGV 832
>gi|19704407|ref|NP_603969.1| GTP-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|19714665|gb|AAL95268.1| GTP-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
Length = 366
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 177/455 (38%), Gaps = 101/455 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCGV +Q+T+ GY +P
Sbjct: 5 CVGCGVELQNTDKNLQGYTPKPINT----------------------------------- 29
Query: 144 TSEVKKHEKPVVCARCHALRHYGK--VKDVTVENLLPDFDFDHTVGRKLMSASGARSVVL 201
++ + C RC L+HYGK V +T E D+ VG+ L +V+
Sbjct: 30 -------KEDMYCQRCFQLKHYGKYSVNKMTRE------DYKKEVGKLLDDVK----LVI 72
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
V D DF+GSF ++ ++ + +++V K+DL+P P+
Sbjct: 73 AVFDIIDFEGSFDVEILDILREKDS-----------------IVIVNKLDLIPDEKHPSE 115
Query: 262 FEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKST 321
+WV+ R E+ I + + VS +G+ + + N IG N GKS+
Sbjct: 116 VANWVKNRLAEESIVPL-DIAIVSTKNGYGVNGVFRKIKHFYPDGVNAMVIGVTNVGKSS 174
Query: 322 LLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP-AQAKLFDTPGLLH 380
++N + A T + PGTT I ++P L+DTPGL+
Sbjct: 175 VINRLLGKKIA---------------TVSKYPGTT--IKNTLNMIPFTNIGLYDTPGLIP 217
Query: 381 PNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV-EESSVESIYVTVWA 439
+ + + + + + E+ +T++ K I I L++ + ++ I+ +++A
Sbjct: 218 EGRASDLVCDNCAQKIIPSGEISRKTFKAKHNRMIMIGNLVKFKILNNDEIKPIF-SIYA 276
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDI 499
+ + H E + E G P + EE K + ++ + ++ ++
Sbjct: 277 AKDVQFHETTIEKS---KELELGNFFTIPCDCCK-EEYNKHKK----INKTLTINTGEEL 328
Query: 500 AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
GL W SV+ +G + V E ++I +R A +
Sbjct: 329 VFKGLAWVSVK-RGPLNIQVTLPEEIEISVRKAFI 362
>gi|145345515|ref|XP_001417253.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577480|gb|ABO95546.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 401
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 135/302 (44%), Gaps = 41/302 (13%)
Query: 140 AENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLL---PDFDFDHTVGRKLMSASGA 196
AE T V +H ++CARC AL + V V + L P + +L
Sbjct: 22 AEYATKAVHRHYDMMLCARCAALSNGKFVNAVEGQGGLKAAPGLITPKQLRDQLKPIREK 81
Query: 197 RSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSS 256
+++V+ VVD DF GSF +KV +V G P ++LVVTK+DLL S
Sbjct: 82 KALVVKVVDVTDFHGSFLKKVRDVV----------------GGNP-ILLVVTKVDLLDSK 124
Query: 257 LSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRG--NVWAIGA 314
WV + A +S + + VS+ K G++ D V+ + +R +V+ +GA
Sbjct: 125 TDLDALVEWVGREAETRRLS-LAGIALVSSRKGSGMR---DAVLQMMRERNGRDVYVLGA 180
Query: 315 QNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFD 374
N GKS+ + A + + K + + +PGTTLG++ ++ + LFD
Sbjct: 181 ANVGKSSFIRAAMDELRSAGNYFAPSKRLP---VASAMPGTTLGVIPLKA-FEGKGILFD 236
Query: 375 TPGLLHPNQITTRLTREEQKLVNINKELK-----------PRTYRIKAGHSIHIAGLMRM 423
TPGL +++ + L ++ + + LK P + G+S+ +R+
Sbjct: 237 TPGLFLHHRLNSLLGPDDLSTMKLGASLKKFVPKTPECAEPPGFDSFQGYSLCWGSFVRV 296
Query: 424 DV 425
DV
Sbjct: 297 DV 298
>gi|363733412|ref|XP_420579.3| PREDICTED: uncharacterized protein C4orf14 [Gallus gallus]
Length = 581
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 6/173 (3%)
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES 432
FDTPG++ N + LT +E KLV + + PRT+ +K G + +A L R+D + +
Sbjct: 381 FDTPGIVKENCVLNLLTEKEVKLVLPTQAIIPRTFILKPGMVLFLAALGRVDYLQGE-KP 439
Query: 433 IYVTVWASPYLPLHMGKTENACTMVEKHFGRQL--QPPIGEKRVEELGKWVRKEFHVSGS 490
+ +V AS LP+H+ +A M EK+ G++ P G++R++E V ++ + G+
Sbjct: 440 AWFSVVASKLLPVHIAALSSADAMYEKYAGQEFFKVPMGGKERMKEFPPLVPQDITLKGT 499
Query: 491 SWDSSSVDIAAAGLGWFSVRLKGEAALGVWTY--EGVDIVLRN-ALLPYRSQV 540
+ DI + GW +V E L + Y G +V+R LLPY S +
Sbjct: 500 GTTEAVADIKLSSAGWVAVTAHAEEELLLRAYTPRGTTVVVREPPLLPYISNI 552
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 28/229 (12%)
Query: 243 VVLVVTKIDLLPSSLSPT---RFEHWVRQRAREDGISK--ITKLHFVSAVKNWGLKSLID 297
+++V K+DLLP+ SP R V + GIS+ + + VSA +G++ L+
Sbjct: 160 LLVVGNKVDLLPAD-SPGHLGRLRQRVTAACLQAGISRAQLVDVRLVSAKTGFGIERLVS 218
Query: 298 DVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTL 357
+ G+V+ +GA N+GKSTL NA+ S ++V+ T + PGTTL
Sbjct: 219 RLQRSWKCAGDVYLLGATNSGKSTLFNALLLSDYC----KSRAPDVVNRATVSSWPGTTL 274
Query: 358 GIVRVEGVLPAQAKLFDTPGLLHPNQITT--RLTREEQKLVNINKELKPRTYRIKAGHSI 415
+++ + P ++F L + T +L+ +E+K +N K K G+ +
Sbjct: 275 NLLKFPIINPTCDRIFRRQERLKEEALKTEDQLSDKEKKHLNRLK---------KQGYLV 325
Query: 416 HIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ 464
G +ESSV P L L E+ C + +KH R+
Sbjct: 326 GRVGRTFKPQKESSVIDF------DPDL-LSYSIDEDPCHIPKKHEERE 367
>gi|193613019|ref|XP_001952820.1| PREDICTED: uncharacterized protein C4orf14 homolog [Acyrthosiphon
pisum]
Length = 689
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 10/187 (5%)
Query: 352 VPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKA 411
V +TLG E ++DTPG++HP+Q LT EE + +KPRT+ ++
Sbjct: 478 VTSSTLGFDENEPQFKNSKFMYDTPGVVHPDQSINLLTTEELMMTLPTTVMKPRTFSLRP 537
Query: 412 GHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQP-PIG 470
++ + GL R+D ++ + + TV+++ LP+ + +E+A + EK G L P G
Sbjct: 538 LQTLFVGGLGRIDCLKTGAKFVRFTVFSAHTLPITVCNSEDADEVYEKLLGTHLLAVPCG 597
Query: 471 EKRVEELGKW-----VRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGV--WTYE 523
+E L KW + ++G + +S DI + GW +V G V WT E
Sbjct: 598 S--IERLSKWPGLSSYKNPIQLTGINEKTSCADIVLSSAGWVAVTPYGNDVCYVQAWTPE 655
Query: 524 GVDIVLR 530
I +R
Sbjct: 656 SRGIYIR 662
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 120/295 (40%), Gaps = 74/295 (25%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+ N PGY PS+ H E
Sbjct: 178 CGGCGALLHCQNSSIPGYL--PSE--------LFCHCGPEDL------------------ 209
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ ++C RCH ++ Y V V+ + + L R++++++
Sbjct: 210 --------RTMICQRCHFIQKYNTALAVQVDPV--------EYPKLLYPIKKKRALIILM 253
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DF S + + + N P VV+V K+DLLP F
Sbjct: 254 VDLTDFPCSIWPNLMECIGI---------------NKP-VVVVGNKLDLLPGD-----FP 292
Query: 264 HWVR--QRAREDGISK---ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAG 318
WV +++ I K I + VSA +G++ LI+ + L +G+V+ IG N G
Sbjct: 293 GWVEHAKKSLAQSIPKDINIKHVTVVSAKTGFGIEELINKLHSLWQTKGDVYLIGCTNVG 352
Query: 319 KSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLF 373
KST+ N + +S D + + ++V T +P PGTTL +++ + P+ +L+
Sbjct: 353 KSTMFNTLLQS-DYCK---VKAVDLVQRATTSPWPGTTLNLLKFPIMRPSNWRLY 403
>gi|296196477|ref|XP_002745854.1| PREDICTED: nitric oxide-associated protein 1 [Callithrix jacchus]
Length = 696
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 97/187 (51%), Gaps = 9/187 (4%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
L+DTPG+ N I LT +E +V + + PRT+ +K G + + + R+D + + +
Sbjct: 492 LYDTPGITKENCILNLLTDKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 550
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEK-RVEELGKWVRKEFHVSG 489
S + TV AS +LP+H+ + A + EKH G LQ P+G K R+ V ++ + G
Sbjct: 551 SAWFTVVASNFLPVHITSLDRADALYEKHAGHTLLQVPMGGKERMAGFPPLVAEDITLKG 610
Query: 490 SSWDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGF 546
+S +V DI + GW +V +K L +T EG + +R LLPY + V G
Sbjct: 611 GLGESEAVADIKFSSAGWVAVTPNVKDRLHLRAYTPEGTILTVRPPLLPY---IVNVKGK 667
Query: 547 TVSKIIS 553
+ K ++
Sbjct: 668 RIKKSVA 674
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 125/347 (36%), Gaps = 93/347 (26%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG + +P PGY + +E + GGL
Sbjct: 141 CSGCGAELHCQDPGMPGY------------------LPHEKFLRAAEAGGGLTR------ 176
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
VC RC L H+ R+ + +R L +
Sbjct: 177 ----------TVCQRCWLLVHH----------------------RRALHLQVSRGQYLEL 204
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
V AA P V MV + +++++ K+DLLP T +
Sbjct: 205 VSAA-LRRPGPSLVLYMVDLLDLPDALLPDLPALVGSKQLIVLGNKVDLLPQDT--TGYR 261
Query: 264 HWVRQRARED----GI----------------------SKITKLHFVSAVKNWGLKSLID 297
+ +R+R +D G+ + + + +SA +G++ LI
Sbjct: 262 NRLRERLWDDCARAGLLLAPGHRGPQDRENSNPSDWSRTVVRDVRLISAKTGYGVEELIS 321
Query: 298 DVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGGDGEEKNIVSHLTEAPVPGTT 356
+ RG+V+ +GA NAGKSTL N + +S +G + ++ +S P PGTT
Sbjct: 322 ALQSSWRYRGDVYLVGATNAGKSTLFNTLLESDYCTAKGAEAIDRATIS-----PWPGTT 376
Query: 357 LGIVRVEGVLPAQAKLFDTPGLLHPN--QITTRLTREEQKLVNINKE 401
L +++ P ++F L + Q L+ +EQ +N K+
Sbjct: 377 LNLLKFPICNPTPYRMFKRQQRLKNDSTQAEDDLSEQEQNQLNFLKK 423
>gi|84994782|ref|XP_952113.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65302274|emb|CAI74381.1| hypothetical protein, conserved [Theileria annulata]
Length = 620
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 147/344 (42%), Gaps = 56/344 (16%)
Query: 242 RVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVD 301
R L++ KIDLLP + + + + + K + +S+ + L+ +++
Sbjct: 272 RFYLILNKIDLLPKYNRDELVQFFKKMINSKVDLLKSKHIFTISSKFKKHVSELMSVILE 331
Query: 302 LAGKRGN-VWAIGAQNAGKSTLLNAI-------------AKSVDAGRGGDGEEKNIVSHL 347
A + GN + IG N+GKSTL+N + AKS + +G + L
Sbjct: 332 EAKRLGNQILFIGPTNSGKSTLINLLRSSLKSKSRSLKNAKSTN-NVIMNGSNSLMGKRL 390
Query: 348 TEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRT- 406
T + +PGTTLG++ + L ++DTPG+ PN + + + K + I + + P T
Sbjct: 391 TSSIIPGTTLGVINIS--LGDNLSIYDTPGIFVPNSLISHVNGINLKDI-ITQNICPNTP 447
Query: 407 YRIK-----------------AGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK 449
R+K G+S+ I +R+D+ +S ++ + S L LH+
Sbjct: 448 IRLKKGSLTVSLFSSHIDIVTIGYSMLIDKYVRIDM--TSGRDVFFKCYFSDKLKLHIKP 505
Query: 450 TENACTMVEKHFGRQ-LQPPIGEKR----------VEELG-------KWVRKEFHVSGSS 491
T + KH+ Q L P + V+ + WV + ++ +
Sbjct: 506 THKINQFLNKHYSDQFLHYPTTQHTSITSDDTVNGVDNVNSNNSTNDNWVMRRMNIILNG 565
Query: 492 WDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLP 535
WD+++ D+ GLG+ ++ A ++T + + LR L P
Sbjct: 566 WDNATCDLCIKGLGFLTIGGALSADFNLYTMKNILYYLRPPLFP 609
>gi|255030495|ref|ZP_05302446.1| GTP-binding protein YqeH [Listeria monocytogenes LO28]
Length = 178
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 347 LTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRT 406
+T + PGTTL ++E L L DTPG+++ +Q+ + K + KE+KP
Sbjct: 3 ITTSQFPGTTLD--KIEIPLADGNVLVDTPGIINHHQMAHFIDTTTLKAITPKKEVKPAV 60
Query: 407 YRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ 466
+++ ++ + L R+D +S+ V+ S LP+H K E A + EK G LQ
Sbjct: 61 FQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNLPIHRTKLEKAEALYEKQAGLVLQ 118
Query: 467 PPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVD 526
PP E+ ++ L K V F V DI +GLGW ++ +G A + W EGV
Sbjct: 119 PPT-EEDMKTLPKLVPYSFTV------KEKADIVFSGLGWVTIP-EGGAKVTAWVPEGVS 170
Query: 527 IVLRNALL 534
+R +L+
Sbjct: 171 ATIRTSLV 178
>gi|195150909|ref|XP_002016392.1| GL11551 [Drosophila persimilis]
gi|194110239|gb|EDW32282.1| GL11551 [Drosophila persimilis]
Length = 623
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 125/312 (40%), Gaps = 72/312 (23%)
Query: 69 TRDGNYDEATPKLTV-CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFS 127
T+ G D + P TV C GCG + +N PGY PS+ N + L
Sbjct: 93 TKHGTPDASIPASTVPCSGCGAHLHCSNISMPGYI--PSEIFNGRSQQEL---------- 140
Query: 128 NSLKKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVG 187
K ++C RCH L HY DV V P + T+
Sbjct: 141 ------------------------KTIICQRCHFLNHYNIALDVDV----PPSSYVDTIS 172
Query: 188 RKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVV 247
R ++ +++VD DF S + ++ G V LV
Sbjct: 173 R----IQDHFALAIVMVDLLDFPSSIWPGMQHVL----------------GTKRPVFLVG 212
Query: 248 TKIDLLP--SSLSPTRFEHWVR----QRAREDGISKITKLHFVSAVKNWGLKSLIDDVVD 301
K+DLLP S+ +H ++ Q DG++ I + +SA +G++ LI +
Sbjct: 213 NKVDLLPRDSNSYLNHVKHCLQRSFIQHGGGDGLN-IKNVSLISAKTGYGIEELITQLHK 271
Query: 302 LAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVR 361
+G+V+ +G N GKSTL N + S D R E +V T P PGTTL ++R
Sbjct: 272 TWSYKGDVYLLGCTNVGKSTLFNILLNS-DYCR---PEASELVRKATTCPWPGTTLELLR 327
Query: 362 VEGVLPAQAKLF 373
P+ ++++
Sbjct: 328 FPIFRPSDSRVY 339
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 17/181 (9%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV-----E 426
++DTPG++ P+Q+T LT EE + ++PR +R++ ++ +AGL RMD+
Sbjct: 417 VYDTPGVMQPDQLTALLTAEELAQLQPTTMIRPRAFRLRPKMTLLLAGLARMDILDLSGS 476
Query: 427 ESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEKRVE-ELGKW---- 480
E + + V V+AS LP+ + T A T+ +++ G L P +E L +W
Sbjct: 477 EKHYDWLKVFVFASQNLPVMIADTLQAETVYKRYLGTPFLGIPSASGDLEARLKRWPGLH 536
Query: 481 -VRKEFHVSGSSWDSS--SVDIAAAGLGWFSVRL--KGEAALGVWTYEGVDIVLRN-ALL 534
K+ VS S + DI + GW + L E +L VWT I +R A++
Sbjct: 537 CKEKDIVVSKSGRHEGRLNCDITLSSAGWLGLLLPDNSECSLRVWTPHAAGIYVRTPAVI 596
Query: 535 P 535
P
Sbjct: 597 P 597
>gi|149035169|gb|EDL89873.1| MMR_HSR1 domain containing protein RGD1359460, isoform CRA_a
[Rattus norvegicus]
Length = 694
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 5/169 (2%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ N I LT +E +V + PRT+ +K G + + G+ R+D + + +
Sbjct: 496 FYDTPGITKENCILNLLTEKEIDIVLPTHSIIPRTFVLKPGMVLFLGGIARVDFLQGN-Q 554
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELGKWVRKEFHVSG 489
S + TV AS +LP+H+ + A + EKH G++L P G++R+ + V ++ + G
Sbjct: 555 SAWFTVVASNFLPVHISSLDKADALYEKHAGQELLLVPMGGKERMAQFPPLVAEDITLKG 614
Query: 490 SSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTY--EGVDIVLRNALLPY 536
+ DI + GW +V E L + Y EG + + +LPY
Sbjct: 615 GGEAEAVADIKFSSAGWVAVTPYSEGTLHLRAYTPEGTALTVHPPVLPY 663
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA +G++ LI + RG+V+ +G NAGKSTL N + +S +G
Sbjct: 312 VKDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGTTNAGKSTLFNTLLESDYCTAKGS 371
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLV 396
+ ++ +S P PGTTL +++ P ++F L + T EQ+
Sbjct: 372 EAIDRATIS-----PWPGTTLNLLKFPICNPTPYRMFKRQKRLQEDASKTEEDLSEQEQS 426
Query: 397 NINKELKPRTY 407
+N +LK Y
Sbjct: 427 QLN-QLKKHGY 436
>gi|383422155|gb|AFH34291.1| mitochondrial nitric oxide synthase [Macaca mulatta]
Length = 698
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 9/187 (4%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ N I LT +E +V + + PRT+ +K G + + + R+D + + +
Sbjct: 494 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 552
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEK-RVEELGKWVRKEFHVSG 489
S + TV AS LP+H+ + A T+ +KH G LQ P+G K R+ V ++ + G
Sbjct: 553 SAWFTVVASNTLPVHITSLDRADTLYQKHAGHTLLQVPMGGKERMAGFPPLVAEDIMLKG 612
Query: 490 SSWDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGF 546
S +V DI + GW SV +KG L +T EG + +R LLPY + + G
Sbjct: 613 GRGGSEAVADIKFSSAGWVSVTPNVKGRLHLRGYTPEGTVLTVRPPLLPY---IVNIKGE 669
Query: 547 TVSKIIS 553
+ K ++
Sbjct: 670 RIKKSVA 676
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA +G++ LI + RG+V+ +GA NAGKSTL N + +S +G
Sbjct: 310 VRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCTAKGS 369
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN--QITTRLTREEQK 394
+ ++ +S P PGTTL +++ P + F L + Q L+ +EQ
Sbjct: 370 EAIDRATIS-----PWPGTTLNLLKFPICNPTPYRRFKRHQRLKKDSTQAEEDLSEQEQN 424
Query: 395 LVNINKE 401
+N+ K+
Sbjct: 425 QLNVLKK 431
>gi|125808464|ref|XP_001360762.1| GA10638 [Drosophila pseudoobscura pseudoobscura]
gi|54635934|gb|EAL25337.1| GA10638 [Drosophila pseudoobscura pseudoobscura]
Length = 623
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 125/312 (40%), Gaps = 72/312 (23%)
Query: 69 TRDGNYDEATPKLTV-CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFS 127
T+ G D + P TV C GCG + +N PGY PS+ N + L
Sbjct: 93 TKHGTPDASIPASTVPCSGCGAHLHCSNISMPGYI--PSEIFNGRSQQEL---------- 140
Query: 128 NSLKKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVG 187
K ++C RCH L HY DV V P + T+
Sbjct: 141 ------------------------KTIICQRCHFLNHYNIALDVDV----PPSSYVDTIS 172
Query: 188 RKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVV 247
R ++ +++VD DF S + ++ G V LV
Sbjct: 173 R----IQDHFALAIVMVDLLDFPSSIWPGMQHVL----------------GTKRPVFLVG 212
Query: 248 TKIDLLP--SSLSPTRFEHWVR----QRAREDGISKITKLHFVSAVKNWGLKSLIDDVVD 301
K+DLLP S+ +H ++ Q DG++ I + +SA +G++ LI +
Sbjct: 213 NKVDLLPRDSNSYLNHVKHCLQRSFIQHGGGDGLN-IKNVSLISAKTGYGIEELITQLHK 271
Query: 302 LAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVR 361
+G+V+ +G N GKSTL N + S D R E +V T P PGTTL ++R
Sbjct: 272 TWSYKGDVYLLGCTNVGKSTLFNILLNS-DYCR---PEASELVRKATTCPWPGTTLELLR 327
Query: 362 VEGVLPAQAKLF 373
P+ ++++
Sbjct: 328 FPIFRPSDSRVY 339
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 17/181 (9%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV-----E 426
++DTPG++ P+Q+T LT EE + ++PR +R++ ++ +AGL RMD+
Sbjct: 417 VYDTPGVMQPDQLTALLTAEELAQLQPTTMIRPRAFRLRPKMTLLLAGLARMDILDLSGS 476
Query: 427 ESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEKRVE-ELGKW---- 480
E + + V V+AS LP+ + T A T+ +++ G L P +E L +W
Sbjct: 477 EKHYDWLKVFVFASQNLPVMIADTLQAETVYKRYLGTPFLGIPSASGDLEARLKRWPGLH 536
Query: 481 -VRKEFHVSGSSWDSS--SVDIAAAGLGWFSVRL--KGEAALGVWTYEGVDIVLRN-ALL 534
K+ VS S + DI + GW + L E +L VWT I +R A++
Sbjct: 537 CKDKDIVVSKSGRHEGRLNCDITLSSAGWLGLLLPDNSECSLRVWTPHAAGIYVRTPAVI 596
Query: 535 P 535
P
Sbjct: 597 P 597
>gi|189200160|ref|XP_001936417.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983516|gb|EDU49004.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 749
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 135/323 (41%), Gaps = 63/323 (19%)
Query: 45 SSSSSFSSQPTNTAPPPLS--SSLALTRDGNYDEATPKLTVCPGCGVLMQDTNPKHPGYF 102
+S+S S P N APPP S S+ +L R CPGCG L Q + K GY+
Sbjct: 56 ASTSHISETPLNNAPPPTSKSSTRSLPR------------TCPGCGALTQMYDKKEAGYY 103
Query: 103 IRPSQNLNKVRKSHLVH---------VANESEFSNSLKK------GGLVVFEAENETSEV 147
N+++ +H A + F+ +LK G L V ++
Sbjct: 104 -----NIDRNAIREYLHWTPNKAKQATAEDEIFAKALKDASPELLGELGVANDVDQAPPD 158
Query: 148 KKHEKPVVCARCHALRHY---GKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVV 204
+ + VC RCH L H+ + TVE ++ + + + R+ + VV
Sbjct: 159 DEAPETPVCDRCHQLIHHRVGSPIHHPTVE----------SIQQTIAESPHRRNHIYHVV 208
Query: 205 DAADFDGSF-PRKVAKM-VSDTAEENERAWKEGKSGN--VPRVVLVVTKIDLL-PSSLSP 259
DAADF S P + + + +N RA +G N + V ++T+ DLL P
Sbjct: 209 DAADFPLSIVPNLQSSLRIPKLRTQNRRAKHKGWVANDRIAEVSFIITRADLLAPKKEQV 268
Query: 260 TRFEHWVRQ-----RAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
+VR R++ +++ + VSA + W K + +D+ + + G W +G
Sbjct: 269 DVLMPYVRDVLRDALGRQNANARLGNVRLVSAKRGWWTKEVKEDIWE---RGGAGWMVGK 325
Query: 315 QNAGKSTLLNAIAKSVDAGRGGD 337
N GKS L A+ GRG D
Sbjct: 326 VNVGKSNLFEAV---FPKGRGAD 345
>gi|167555073|ref|NP_001107900.1| nitric oxide-associated protein 1 [Danio rerio]
gi|161611968|gb|AAI55838.1| Zgc:175125 protein [Danio rerio]
Length = 702
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES 432
+DTPG++ N + + LT +E KLV + PRT+ +K G + + GL R+D + S
Sbjct: 493 YDTPGIIKENDLLSVLTEQEVKLVVPTVAITPRTFLLKPGTVLFLGGLARIDYLQGQ-NS 551
Query: 433 IYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELGKWVRKEFHVSGS 490
+ TV AS +P+H+ + A + +KH G L P GE+R++ + ++F + G
Sbjct: 552 CWFTVLASSRVPVHITSLDKADDIYQKHAGNTLLGVPCGGEERMKTFPPLIAQDFELQGQ 611
Query: 491 SWDSSSVDIAAAGLGWFSV----------RLKGEAALGV 519
D++ DI + GW +V R + AA GV
Sbjct: 612 DCDTAIADIKISSAGWIAVTADAGDQLLLRTRAPAAAGV 650
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 135/344 (39%), Gaps = 83/344 (24%)
Query: 82 TVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAE 141
T C GCG L+ T+P+ PGY PS+ ++ L+ GGL
Sbjct: 174 TSCSGCGALLHCTDPQEPGYL--PSE-----------------KYKPLLEGGGL------ 208
Query: 142 NETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVL 201
+ VC RC ++H + V + PD + + G+ +
Sbjct: 209 ----------ERAVCQRCFLIQHQQRALSVRMS---PD---------QYRAVVGSIRPLS 246
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
+V P + + N+R VV++ K+DLLP
Sbjct: 247 ALVLLILDLLDLPHSIIPDLPQLLGRNKR------------VVVLGNKVDLLPGDAQ--N 292
Query: 262 FEHWVRQRARED----GISKITK-LHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQN 316
+ VR++ D GIS + +H +SA +G+++LI + RG+V+ IG N
Sbjct: 293 YLQRVRRQLMADCARAGISADPRDVHLISAKTGYGIETLISSLQTRGRHRGDVYLIGMAN 352
Query: 317 AGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTP 376
AGKSTL N + +S + + T +P PGTTL +++ + P +L
Sbjct: 353 AGKSTLFNTLLESDYC----KSTAADAIHRATISPWPGTTLNLLKFPILNPTAHRL---- 404
Query: 377 GLLHPNQITTRLTREEQKLVNIN-KELKPRTYRIKAGHSIHIAG 419
+ R R +Q NI EL+ T+ + G+ I G
Sbjct: 405 --------SRRAERLQQTQQNITADELRRITHYSRHGYLIGHVG 440
>gi|224049407|ref|XP_002192151.1| PREDICTED: nitric oxide-associated protein 1 [Taeniopygia guttata]
Length = 457
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 93/173 (53%), Gaps = 7/173 (4%)
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES 432
FDTPG++ + + LT +E KLV + + PRT+ +K G + +A L R+D +S
Sbjct: 258 FDTPGIVKEDCVLNLLTEKEVKLVLPSHAIVPRTFILKPGMVLFLAALGRIDYLGNS--P 315
Query: 433 IYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPI-GEKRVEELGKWVRKEFHVSGS 490
+ +V AS LP+H+ NA T+ EKH ++ L+ P+ GE+R++E V ++ + G
Sbjct: 316 AWFSVLASNLLPVHVTTLGNADTVYEKHAAQEFLKVPMGGEERMKEFPPLVPQDITLKGI 375
Query: 491 SWDSSSVDIAAAGLGWFSVRLKGEAALGVWTY--EGVDIVLRN-ALLPYRSQV 540
+ DI + GW +V E L + Y +G +V+R LLPY S +
Sbjct: 376 GTTEAVADIKLSSAGWVAVTAHAEEELLLRAYTPKGTALVVREPPLLPYISAI 428
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 87/177 (49%), Gaps = 21/177 (11%)
Query: 243 VVLVVTKIDLLPSSLSPTRFEHWVRQRAR------EDGI--SKITKLHFVSAVKNWGLKS 294
V++V K+D+LP+ R H R R R G+ + + + VSA +GL+
Sbjct: 32 VLVVGNKVDVLPAD----RRGHLGRLRQRVAAACARAGLRGAALVDIRLVSAKTGYGLEG 87
Query: 295 LIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPG 354
L+ + G+V+ +GA N+GKSTL N + +S D + +I+ T +P PG
Sbjct: 88 LVSRLQRSWKCAGDVYLLGATNSGKSTLFNTLLRS-DYCK---SRAPDIIDRATVSPWPG 143
Query: 355 TTLGIVRVEGVLPAQAKLFDTPGLLHPNQITT--RLTREEQKLVNINKELKPRTYRI 409
TTL +++ + P ++F L T +L+ EE+K +N +LK + Y +
Sbjct: 144 TTLNLLKFPIINPTCDRIFRRQERLKEEAAKTEDQLSSEEKKYLN---QLKKQGYLV 197
>gi|119472724|ref|XP_001258406.1| hypothetical protein NFIA_058600 [Neosartorya fischeri NRRL 181]
gi|119406558|gb|EAW16509.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
Length = 658
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 180/447 (40%), Gaps = 92/447 (20%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANE------------------- 123
CPGCG Q P PGY+ + +++ K+ S AN+
Sbjct: 83 CCPGCGAYAQTVEPNEPGYYGKTRKHVRKL-ISESQRAANDRPEGREEETDLRSEAEKAA 141
Query: 124 --------SEFSNSLKKGGLVVFEAENETSE-VKKHEKPV-VCARCHALRHYGKVKDVTV 173
SE K G ++ EA S ++K P VC RCH L H+ K V
Sbjct: 142 STILKLVDSEVPIPKAKHGAMLQEATTTASHFLEKSRAPAQVCDRCHDLIHHNKAVSVPT 201
Query: 174 ENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKV--AKMVSDTAEENERA 231
+ +++ L + + + V+DAADF S + A + + +N RA
Sbjct: 202 PTI-------YSIQEYLKESPHRDNRIYHVIDAADFPMSLVDNIYDALSIQEPRSKNRRA 254
Query: 232 WKEGK--SGNVPRVVLVVTKIDLLPSSLSPTRFE-HWVRQRAREDGIS------KITKLH 282
E +P + V+T+ DLL ++ + +VR R D + ++ +H
Sbjct: 255 STEKYRWGRKLPTISFVITRSDLLTATKEQVDSKMEYVRSVLR-DALKMSSEEFRLGNVH 313
Query: 283 FVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNA-----------IAKSVD 331
+SA + W K + +D+ + G +W +G N GKS+ + A IA+ VD
Sbjct: 314 MISAHRGWWTKQVKEDIREHGG---GIWVVGKANVGKSSFIEACFPKDSRNLEKIAELVD 370
Query: 332 -AGRGGDGEEKNIVSH-----LTEAP-------------VPGTTLGIVRVEGVLPAQAKL 372
D + N VS L AP VPGTT+ +R+ + ++
Sbjct: 371 RRAVESDINQLNDVSLGSDSILPPAPREDLYPVLPVVSSVPGTTVSPIRIP-FGHGKGEM 429
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHS-IHIAGLMRMDVEESSVE 431
D PGL Q+ + E ++ + + K KP +K G S + GL+R+ E
Sbjct: 430 IDLPGLDR-GQLLNHVRDEHKRDLTMTKRKKPERLTVKPGQSLLLGGGLVRITAENPD-- 486
Query: 432 SIYVTVWASPYLPL--HMGKTENACTM 456
+ A+ ++P+ H+ +TE A M
Sbjct: 487 ---HVLMAACFVPIEAHVTRTEKAVEM 510
>gi|309803213|ref|ZP_07697310.1| GTP-binding protein [Lactobacillus iners LactinV 11V1-d]
gi|308164721|gb|EFO66971.1| GTP-binding protein [Lactobacillus iners LactinV 11V1-d]
Length = 174
Score = 80.1 bits (196), Expect = 3e-12, Method: Composition-based stats.
Identities = 61/188 (32%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 347 LTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRT 406
+T + PGTTL +++ L L DTPG+L Q+ +RLT E +LV K+LKP T
Sbjct: 2 ITTSKFPGTTLDSIKIP--LNEGHYLVDTPGILSKKQMASRLTGSELELVAPKKQLKPAT 59
Query: 407 YRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ 466
Y++ G +I +AGL R+D + T++ + L LH KT NA KH L
Sbjct: 60 YQLLPGQTIFLAGLGRIDFIKGPASGF--TIYVARDLYLHRTKTINADEFYLKHKSDLLN 117
Query: 467 PPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVD 526
PP ++LG + + S S DI G+G+ +V + +T EG+
Sbjct: 118 PPCDN---DDLGALKGQLYSTSEKS------DILFGGVGFITV--PSGVVIKAYTPEGIG 166
Query: 527 IVLRNALL 534
+ +R AL+
Sbjct: 167 LGIRRALI 174
>gi|309805283|ref|ZP_07699335.1| GTP-binding protein [Lactobacillus iners LactinV 09V1-c]
gi|308165517|gb|EFO67748.1| GTP-binding protein [Lactobacillus iners LactinV 09V1-c]
Length = 174
Score = 79.7 bits (195), Expect = 4e-12, Method: Composition-based stats.
Identities = 61/188 (32%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 347 LTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRT 406
+T + PGTTL +++ L L DTPG+L Q+ +RLT E +LV K+LKP T
Sbjct: 2 ITTSKFPGTTLDSIKIP--LNEGHYLVDTPGILSKKQMASRLTGSELELVAPKKQLKPAT 59
Query: 407 YRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ 466
Y++ G +I +AGL R+D + T++ + L LH KT NA KH L
Sbjct: 60 YQLLPGQTIFLAGLGRIDFIKGPASGF--TIYVARDLYLHRTKTINADEFYLKHKSDLLN 117
Query: 467 PPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVD 526
PP ++LG + + S S DI G+G+ +V + +T EG+
Sbjct: 118 PPCDS---DDLGALKGQLYSTSEKS------DILFGGVGFITV--PSGVVIKAYTPEGIG 166
Query: 527 IVLRNALL 534
+ +R AL+
Sbjct: 167 LGIRRALI 174
>gi|403284581|ref|XP_003933641.1| PREDICTED: nitric oxide-associated protein 1 [Saimiri boliviensis
boliviensis]
Length = 704
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 96/187 (51%), Gaps = 9/187 (4%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ N I LT +E +V + + PRT+ +K G + + + R+D + + +
Sbjct: 500 FYDTPGITKENCILNLLTDKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLKGN-Q 558
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEK-RVEELGKWVRKEFHVSG 489
S + TV AS +LP+H+ + A + EKH G LQ P+G K R+ V ++ + G
Sbjct: 559 SAWFTVVASNFLPVHITSLDRADALYEKHAGHTLLQVPMGGKERMAGFPSLVAEDITLKG 618
Query: 490 SSWDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGF 546
+S +V DI + GW +V +K L +T EG + +R LLPY + V G
Sbjct: 619 GLGESEAVADIKFSSAGWVAVTPNVKDRLHLRAYTPEGTVLTVRPPLLPY---IVNVKGK 675
Query: 547 TVSKIIS 553
+ K ++
Sbjct: 676 RIKKSVA 682
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA +G++ LI + RG+V+ +GA NAGKSTL N + +S +G
Sbjct: 310 VRDVRLISAKTGYGVEELISALQSSWRYRGDVYLVGATNAGKSTLFNTLLESDYCTAKGA 369
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN--QITTRLTREEQK 394
+ ++ +S P PGTTL +++ P ++F L N Q L+ +EQ
Sbjct: 370 EAIDRATIS-----PWPGTTLNLLKFPICNPTPYRMFKRHQRLKNNSTQAEDDLSEQEQN 424
Query: 395 LVNINKE 401
+N K+
Sbjct: 425 QLNFLKK 431
>gi|322799594|gb|EFZ20872.1| hypothetical protein SINV_10706 [Solenopsis invicta]
Length = 778
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 167/425 (39%), Gaps = 123/425 (28%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+ + PGY PS+ L + +E E
Sbjct: 274 CGGCGALLHCKDQALPGYL--PSE---------------------------LFLKRSERE 304
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVE-NLLPDFDFDHTVGRKLMSASGARSVVLM 202
+ ++C RCH +++Y +V V + P+ L + V++
Sbjct: 305 L-------QIMICQRCHFMQYYNTTLEVKVSADEYPEL---------LKVIKTKKCAVIL 348
Query: 203 VVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPR--VVLVVTKIDLLPSSLSPT 260
+VD DF S W E S P V +V KIDLLP S
Sbjct: 349 MVDLTDFPCSI------------------WPEINSVLHPYTPVFVVGNKIDLLPQD-SKH 389
Query: 261 RFEH----WVRQRAREDGISK--ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
F H ++ A GI K I + VSA +G++ LI+ + + +G+V+ IG
Sbjct: 390 FFTHIKECLLKSVATGTGIKKENIKHVALVSAKTGYGIEELINKLHKIWKYKGDVYVIGC 449
Query: 315 QNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFD 374
N GKS+L NA+ +S D + + ++V T +P PGTTL +++ + P + +L+
Sbjct: 450 TNVGKSSLFNALLQS-DYCK---VQAVDLVQRATISPWPGTTLNLLKFPILNPLRWRLYL 505
Query: 375 TPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIY 434
T RL +E+Q + E K R + KA H++ A L
Sbjct: 506 R---------TLRLQKEQQYK---HAEEKFRIDQFKATHNLKYATLQS------------ 541
Query: 435 VTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGE----KRVEELG-KWVRKEFHVSG 489
H+G+T + FG ++ P E KR ++ G R+E+ S
Sbjct: 542 -----------HIGRT------FQSKFGTKVDDPFAEEKYKKRTQQFGLDETREEYKHSR 584
Query: 490 SSWDS 494
+D+
Sbjct: 585 WCYDT 589
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 5/162 (3%)
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES 432
+DTPG + P+Q+ LT +E V K + PRT+ + +I + G+ R+D E +
Sbjct: 587 YDTPGTIQPDQVLDLLTTQELLSVLPKKIISPRTFVLHVNQTIFLGGIGRLDYIEGN-HF 645
Query: 433 IYVTVWASPYLPLHMGKTENACTMVEKHFGRQ--LQPPIGEKRVEELGKWVRKEFHVSGS 490
I T+++S LP+ + +TE+A ++ + + + P R++ KE V+G
Sbjct: 646 IRCTIFSSSELPVTLTRTEDADSVYNELLETEAFVVPENNPDRLKHWPALESKEMEVTGV 705
Query: 491 SWDSSSVDIAAAGLGWFSVRLK--GEAALGVWTYEGVDIVLR 530
+ S DI + GW ++ K L W+ +G + LR
Sbjct: 706 GKNESIGDIVLSSAGWIAITAKEADRVLLRAWSPQGRGLYLR 747
>gi|194753380|ref|XP_001958990.1| GF12654 [Drosophila ananassae]
gi|190620288|gb|EDV35812.1| GF12654 [Drosophila ananassae]
Length = 566
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 90/181 (49%), Gaps = 17/181 (9%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEE---- 427
++DTPG++HP+Q+T LT EE + K ++PR +R++ SI + GL RMD+ E
Sbjct: 360 VYDTPGVMHPDQLTPLLTAEELVQLQPTKMIRPRAFRLRPQMSIFLGGLARMDLLELRSY 419
Query: 428 -SSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELGKW---V 481
+ + I V V+AS +LP+ + T+ A + +++ G P G L +W
Sbjct: 420 KNQFDWIKVFVFASEHLPVLISDTQEADNIYKRYLGTPYLGVPTAGGDLEARLHRWPGLQ 479
Query: 482 RKEFHV----SGSSWDSSSVDIAAAGLGWFSVRLKG--EAALGVWTYEGVDIVLRN-ALL 534
KE + G S + DI + GW + L G E L VWT I R+ AL+
Sbjct: 480 AKEDEIVVESKGRSEGRLNCDITLSSAGWMGLLLPGHSECRLRVWTPNSTGIYKRDPALI 539
Query: 535 P 535
P
Sbjct: 540 P 540
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 37/227 (16%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
+ C RCH L +Y DV V + T+ + ++ +++VD DF S
Sbjct: 86 ITCQRCHFLHNYNIALDVEVTPA----SYVETISQ----IQDKYALAIVIVDLLDFPSSI 137
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARED 273
+ ++ G + LV K+DLLP S +H V++ R +
Sbjct: 138 WPGMQNVL----------------GTKRPIFLVGNKVDLLPRD-SNIYLQH-VKECLRNE 179
Query: 274 GIS-------KITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAI 326
+ I + +SA +G++ LI + +G+V+ +G N GKS+L N +
Sbjct: 180 FVRYGGGNELNIKNVSLISAKTGYGIEELITQLQKTWAYKGDVYLLGCTNVGKSSLFNIL 239
Query: 327 AKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLF 373
S D R E ++V T P PGTTL ++R + P+ +++
Sbjct: 240 LNS-DYCR---PEASDLVRQATTCPWPGTTLKLLRFPILRPSNDRIY 282
>gi|146324503|ref|XP_751142.2| conserved hypothetical protein [Aspergillus fumigatus Af293]
gi|129557279|gb|EAL89104.2| conserved hypothetical protein [Aspergillus fumigatus Af293]
gi|159124713|gb|EDP49831.1| conserved hypothetical protein [Aspergillus fumigatus A1163]
Length = 658
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 180/446 (40%), Gaps = 90/446 (20%)
Query: 83 VCPGCGVLMQDTNPKHPGYF----------IRPSQNLNKVR----------KSHLVHVAN 122
CPGCG Q P PGY+ I SQ K R +S A+
Sbjct: 83 CCPGCGAYAQTVEPNEPGYYGKTRKHVRKLILESQRAAKDRPGSGEEETDLRSEAEKAAS 142
Query: 123 ------ESEFSNSLKKGGLVVFEAENETSE-VKKHEKPV-VCARCHALRHYGKVKDVTVE 174
+SE K G ++ EA S ++K P VC RCH L H+ K V
Sbjct: 143 TILKLVDSEVPIPKAKHGAMLQEAATTASHFLEKSRAPAQVCDRCHDLIHHNKAVSVPTP 202
Query: 175 NLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKV--AKMVSDTAEENERAW 232
+ +++ L + + + V+DAADF S + A + + +N RA
Sbjct: 203 TI-------YSIQEYLKESPHRDNRIYHVIDAADFPMSLVDNIYDALSIQEPRSKNRRAS 255
Query: 233 KEGK--SGNVPRVVLVVTKIDLLPSSLSPTRFE-HWVRQRAREDGIS------KITKLHF 283
E +P + V+T+ DLL ++ + +VR R D + ++ +H
Sbjct: 256 TEKYRWGRKLPTISFVITRSDLLAATKEQVDSKMEYVRSVLR-DALKLSSEHFRLGNVHM 314
Query: 284 VSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNA-----------IAKSVD- 331
+SA + W K + +D+ + G +W +G N GKS+ + A IA+ V+
Sbjct: 315 ISAHRGWWTKQVKEDIREHGG---GIWVVGKANVGKSSFIEACFPKDSRNLEKIAELVER 371
Query: 332 AGRGGDGEEKNIVSH-----LTEAP-------------VPGTTLGIVRVEGVLPAQAKLF 373
D + N VS L AP VPGTT+ +R+ + ++
Sbjct: 372 RAVESDINQLNDVSLGSDSILPPAPREDLYPVLPVVSSVPGTTVSPIRIP-FGHGKGEMI 430
Query: 374 DTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHS-IHIAGLMRMDVEESSVES 432
D PGL Q+ + E ++ + + K KP +K G S + GL+R+ E
Sbjct: 431 DLPGLDR-GQLLNHVLDEHKRDLTMTKRKKPERLTVKPGQSLLLGGGLVRITAENPD--- 486
Query: 433 IYVTVWASPYLPL--HMGKTENACTM 456
+ A+ ++P+ H+ KTE A M
Sbjct: 487 --HVLMAACFVPIETHVTKTEKAVEM 510
>gi|315053799|ref|XP_003176274.1| hypothetical protein MGYG_00362 [Arthroderma gypseum CBS 118893]
gi|311338120|gb|EFQ97322.1| hypothetical protein MGYG_00362 [Arthroderma gypseum CBS 118893]
Length = 618
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 124/507 (24%), Positives = 200/507 (39%), Gaps = 116/507 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L Q PK PGY+ K K ++ E E G FE E E
Sbjct: 81 CHGCGALTQWVYPKEPGYYT----ITRKPVKQYIRQATKEKE------SDGSSSFELETE 130
Query: 144 ---TSEVKKHEKPVV--CARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR- 197
TSE K+ + + C RCH L ++G+ + L + R L+ S
Sbjct: 131 DKLTSESKESKDIAIPLCDRCHNLINHGEGDPIPYPTL--------SYIRDLIEESPFHN 182
Query: 198 SVVLMVVDAADFDGSFPRKVAKMVSDTAE--ENERAW--KEGKSGNVPRVVLVVTKIDLL 253
+ + V+DAADF S + K V + +N R+ K G S + + V+T+ DLL
Sbjct: 183 NYIYHVLDAADFPLSVIPNLEKYVPLQPQRSQNRRSHTKKYGSSRYLAELNFVITRADLL 242
Query: 254 PSSLSPT------RFEHWVRQRA--REDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGK 305
S++ P +RQ +E GI ++ +H VS+ + W K + +D+ + +
Sbjct: 243 -SNVKPQADSLMKNMVEILRQTLDRKEHGI-RLGNVHMVSSYRGWWTKEIKEDIWN---Q 297
Query: 306 RGNVWAIGAQNAGKSTLLNAI---------AKSVDAGRGG-------------------- 336
G VW +G N GKS L+ ++ A+ + +G
Sbjct: 298 GGGVWMVGKANVGKSKLITSVFPKTAPAYKARKIQNYKGVTIIGRSTPPDETDVTAVEEL 357
Query: 337 DGEEKNIVSHL----TEAPV---------PGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
DG E + L E P PGTT +R+ + ++ D PGL N
Sbjct: 358 DGGEDGVAVLLPPLQKEVPFPNLPIDSVRPGTTASPIRIP-FDKHRGEVIDLPGLFRSNL 416
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMD-VEESSVESIYVTVWASPY 442
+ + LV ++ +P IK S+ + GL+ + +EE+ + ASP+
Sbjct: 417 DEFVQDKHKSDLVMTSRP-RPTQLTIKPSQSLLLGGLIGIKPLEENEI------FLASPF 469
Query: 443 LPL--HMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKW------VRKEFHVSG----- 489
+ L H+ + A M+ +Q + P G E +G+ V ++ V+
Sbjct: 470 VSLEAHVTHKDKAAEML----AQQRECPTGNIAKEGIGEQITSAGIVELKYDVTARYAKP 525
Query: 490 -------SSWDSSSVDIAAAGLGWFSV 509
S + VDI G GW +
Sbjct: 526 LPNGSLPSLYRIMGVDILIEGCGWIEL 552
>gi|255030450|ref|ZP_05302401.1| GTP-binding protein YqeH [Listeria monocytogenes LO28]
Length = 173
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 103/236 (43%), Gaps = 69/236 (29%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG ++Q +P GY P +LN NE
Sbjct: 7 CIGCGAVIQTEDPDKIGY--APKSSLN-----------NEQ------------------- 34
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
V+C RC L+HY +++DV L D DF R L S +++++ V
Sbjct: 35 ----------VICKRCFRLKHYNEIQDVA----LTDDDF----LRILNQISSKQALIVYV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
VD DFDGS+ + + +G+ P V+LV K D+LP SL +
Sbjct: 77 VDIFDFDGSWLPGLPRF----------------AGSNP-VLLVGNKEDVLPKSLKRDKLT 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGK 319
W+R RA+E G++ T + VSA K G +L++ + +L + +V+ +G N GK
Sbjct: 120 RWMRTRAKEQGLAA-TDVVLVSAEKGHGFDTLLEKIDELRNGQ-DVYVVGCTNVGK 173
>gi|126331705|ref|XP_001369899.1| PREDICTED: uncharacterized protein C4orf14 homolog [Monodelphis
domestica]
Length = 685
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 14/202 (6%)
Query: 361 RVEGVLPAQAK----LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIH 416
RVE ++P + K +DTPG++ N + LT +E K+V + + PRT+ +K G +
Sbjct: 470 RVE-LIPEELKDAHWFYDTPGIVKENCVLNYLTEKEVKIVLPTRSIIPRTFILKPGTVLF 528
Query: 417 IAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGE-KRV 474
+ L R+D + + S + +V AS LP+H+ E A T+ +KH G+ LQ P+G +R+
Sbjct: 529 LGALGRLDYLQGNT-SAWFSVVASNLLPVHITTLEKADTIYQKHAGQTLLQVPMGGVERM 587
Query: 475 EELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGV--WTYEGVDIVLRN- 531
E V ++ + G+ + DI + GW +V E L + +T +G + +R
Sbjct: 588 AEFPPLVSQDITLEGNGKLEAVADIKLSSAGWVAVTSLSEDKLHLRGYTPQGTTLTIRQP 647
Query: 532 ALLPYRSQVFEVAGFTVSKIIS 553
LLPY + V G + K ++
Sbjct: 648 PLLPY---IVSVKGERIKKSVA 666
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 141/367 (38%), Gaps = 95/367 (25%)
Query: 72 GNYDEATPKLTV-CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSL 130
G+ D P V C GCG + +P PGY PS+ + A+E
Sbjct: 127 GSPDPTVPVSGVNCSGCGAELHCQDPLVPGYL--PSEKYRSLEAQ-----ADE------- 172
Query: 131 KKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKL 190
GGL VC RC L H+ + V V D R+L
Sbjct: 173 --GGLAR----------------AVCQRCWLLVHHQRALRVRV---------DREQYREL 205
Query: 191 MSASGAR---SVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVV 247
+ A+ R ++VL ++D F + + + +++L+
Sbjct: 206 VRAALRRPGPALVLYIMDV------FDLPDSLLPDLPDLLGPK-----------QLMLLG 248
Query: 248 TKIDLLPS----------------------SLSPTRFEHWVRQRAREDGISKITKLHFVS 285
K+DLLP L PT+ + + R ++ + +S
Sbjct: 249 NKVDLLPGDSPGYLRRLRERLWDECARAGLQLVPTKAKGRPAEAGRTGPQCQVQDVLLIS 308
Query: 286 AVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGGDGEEKNIV 344
A +G++ +I V RG+V+ +G+ NAGKSTL N + +S +G D ++ +
Sbjct: 309 AKTGFGVEEMISAVQRSWRYRGDVYLVGSTNAGKSTLFNTLLQSDYCIAKGADAIDRATI 368
Query: 345 SHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR--LTREEQKLVNINKEL 402
S P PGTTL +++ P +LF+ L + L+ +EQK + K++
Sbjct: 369 S-----PWPGTTLNLLKFPISSPTPYRLFERNRRLQQEAAKSEDDLSEQEQKHL---KQM 420
Query: 403 KPRTYRI 409
K R Y +
Sbjct: 421 KKRGYLV 427
>gi|68005503|ref|XP_670047.1| DNAJ domain protein [Plasmodium berghei strain ANKA]
gi|56484922|emb|CAI03510.1| DNAJ domain protein, putative [Plasmodium berghei]
Length = 225
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 6/214 (2%)
Query: 308 NVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP 367
+++ +G N GKS+ LN+ K ++ GD K +T + +P TTL + L
Sbjct: 9 DIYIVGCVNVGKSSFLNSFLKFINYKHIGDIYNKRKKGGVTVSNIPYTTLNYNVFK--LK 66
Query: 368 AQAKLFDTPGLLHPNQITTRLTRE-EQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVE 426
+ DT G+ Q ++ L ++ + + INK+++P TY++K +SI + L +++
Sbjct: 67 KDINIIDTIGIPTKYQYSSILYKDIDLNSIIINKKIQPFTYKLKDDYSIILGSLCYINLI 126
Query: 427 ESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFH 486
+ + T + S + +HM ++E +EK L PP + L +V+
Sbjct: 127 YGNFALL--TFYISNKVTIHMCRSEKIENFLEKKKCSFLYPPHVYSDFDLLKPFVKHTVK 184
Query: 487 VSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVW 520
V G ++S DI + L WFS+ +G ++
Sbjct: 185 VLGKDYESID-DIVISDLCWFSITGRGIKIFEIY 217
>gi|354498862|ref|XP_003511531.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein C4orf14
homolog [Cricetulus griseus]
Length = 691
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 8/186 (4%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ N I LT +E +V + PRT+ +K + + + R+D E +
Sbjct: 493 FYDTPGITKENCILNLLTEKEVDIVLPTHSIVPRTFVLKPRMVLFLGAIARIDFLEGD-Q 551
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEK-RVEELGKWVRKEFHVSG 489
S + TV AS +LP+H+ + A + EKH G + LQ P+G K R+ E V ++ + G
Sbjct: 552 SAWFTVVASNFLPVHITSLDKADALYEKHAGHELLQVPMGGKERMAEFPPLVAEDITLKG 611
Query: 490 SSWDSSSVDIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFT 547
+ DI + GW +V KG L +T EG + ++ +LPY + + G
Sbjct: 612 GGDSEAVADIKFSSAGWVAVTPYSKGTLHLRGYTPEGTVLTVQPPVLPY---IVNIKGHR 668
Query: 548 VSKIIS 553
+ K ++
Sbjct: 669 IKKSVA 674
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
I + +SA +G++ LI + RG+V+ +G NAGKSTL N + +S +G
Sbjct: 309 IKDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGTTNAGKSTLFNTLLESDYCTAKGS 368
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLL--HPNQITTRLTREEQK 394
+ ++ +S P PGTTL +++ P ++F L + L+ EEQ
Sbjct: 369 EAIDRATIS-----PWPGTTLNLLKFPICNPTPYRMFRRQKRLKEEATKAEEDLSEEEQS 423
Query: 395 LVNINKELKPRTYRI 409
+N +LK Y+I
Sbjct: 424 QLN---QLKKHAYKI 435
>gi|344247351|gb|EGW03455.1| Uncharacterized protein C4orf14-like [Cricetulus griseus]
Length = 474
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 8/186 (4%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ N I LT +E +V + PRT+ +K + + + R+D E +
Sbjct: 276 FYDTPGITKENCILNLLTEKEVDIVLPTHSIVPRTFVLKPRMVLFLGAIARIDFLEGD-Q 334
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEK-RVEELGKWVRKEFHVSG 489
S + TV AS +LP+H+ + A + EKH G + LQ P+G K R+ E V ++ + G
Sbjct: 335 SAWFTVVASNFLPVHITSLDKADALYEKHAGHELLQVPMGGKERMAEFPPLVAEDITLKG 394
Query: 490 SSWDSSSVDIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGFT 547
+ DI + GW +V KG L +T EG + ++ +LPY + + G
Sbjct: 395 GGDSEAVADIKFSSAGWVAVTPYSKGTLHLRGYTPEGTVLTVQPPVLPY---IVNIKGHR 451
Query: 548 VSKIIS 553
+ K ++
Sbjct: 452 IKKSVA 457
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
I + +SA +G++ LI + RG+V+ +G NAGKSTL N + +S +G
Sbjct: 92 IKDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGTTNAGKSTLFNTLLESDYCTAKGS 151
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLL--HPNQITTRLTREEQK 394
+ ++ +S P PGTTL +++ P ++F L + L+ EEQ
Sbjct: 152 EAIDRATIS-----PWPGTTLNLLKFPICNPTPYRMFRRQKRLKEEATKAEEDLSEEEQS 206
Query: 395 LVNINKELKPRTYRI 409
+N +LK Y+I
Sbjct: 207 QLN---QLKKHAYKI 218
>gi|307177178|gb|EFN66411.1| Uncharacterized protein C4orf14 [Camponotus floridanus]
Length = 697
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 137/340 (40%), Gaps = 75/340 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+ + PGY PS+ N+SE
Sbjct: 177 CGGCGALLHCKDHALPGYL--PSELF-----------LNKSE------------------ 205
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
K + +VC RCH +++Y +V V + L + V+++
Sbjct: 206 -----KELRVMVCQRCHFMKYYNTTLEVKVSA--------DEYPKLLKVIKTKKCAVILM 252
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPR--VVLVVTKIDLLPSSLSPTR 261
VD DF S W E S P V +V K+DLLP SP
Sbjct: 253 VDLTDFPCSI------------------WPEINSVLHPLTPVFVVGNKVDLLPQD-SPHF 293
Query: 262 FEH---WVRQRAREDGI--SKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQN 316
F H + + GI KI + +SA +G++ LI+ + L +G+V+ IG N
Sbjct: 294 FTHVKECLSKAVENAGIKKEKIRHIELISAKTGYGIEELINKLHSLWKYKGDVYVIGCTN 353
Query: 317 AGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLF-DT 375
GKS+L NA+ +S D + + +++ T +P PGTTL +++ + P + +L+ T
Sbjct: 354 VGKSSLFNALLQS-DYCK---VQAVDLIQRATISPWPGTTLNLLKFPILNPLRWRLYMRT 409
Query: 376 PGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSI 415
L++ Q R + + ++LK T + G +
Sbjct: 410 MRLINERQFKHDENRIKNDMFKTTRKLKYATLQSHIGMTF 449
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 31/195 (15%)
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES 432
+DTPG + P QI LT E V + + PRT+ ++ +I + G+ R+D E
Sbjct: 488 YDTPGTIQPEQILDLLTTPELLSVLPRRIISPRTFILQTDQTIFLGGIGRLDYLEGD-GF 546
Query: 433 IYVTVWASPYLPLHMGKTENACTMVEKHFGRQ--LQPPIGEKRVEELGKWVRKEFHVSGS 490
I T+++S LP+ + T +A + ++ + + P +R++ KE V G
Sbjct: 547 IRCTIFSSRQLPITVTNTADADNIYDELLKTEAFVVPESNPERLKHWPALGSKEMEVIGI 606
Query: 491 SWDSSSVDI------------------AAAGLGWFS------VRLKGEAALGVWTYEGVD 526
+ S+ D+ A +GW + VRL +L WT +G
Sbjct: 607 GRNESAADVVLSSGGTYLRFVILNLMKAIIVIGWIAIAGGQNVRL----SLKAWTPQGRG 662
Query: 527 IVLRNALLPYRSQVF 541
+ LR L +S V
Sbjct: 663 LHLRTPALLSKSVVL 677
>gi|146318021|ref|YP_001197733.1| GTPase [Streptococcus suis 05ZYH33]
gi|145688827|gb|ABP89333.1| Predicted GTPase [Streptococcus suis 05ZYH33]
Length = 212
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 39/208 (18%)
Query: 156 CARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASG-ARSVVLMVVDAADFDGSFP 214
C RC LRHY ++ DV + D DF KL+ + G + ++V+ V+D DF+GS
Sbjct: 40 CQRCFRLRHYNEISDVNIS----DDDF-----LKLLHSVGESDALVVNVIDIFDFNGSVI 90
Query: 215 RKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDG 274
+ + +S GN V+LV K D+LP S+ + W+ +RA E G
Sbjct: 91 PGLPRFIS---------------GN--DVLLVGNKQDILPKSVKTGKVTQWLTERAHEIG 133
Query: 275 ISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGR 334
+ + + SA +K LI+ ++ K +V+ +G N GKSTL+NAI + +
Sbjct: 134 MRPV-DVVLTSAQNKQAIKDLIEK-IEQHRKGRDVYVVGVTNVGKSTLINAIIQEITG-- 189
Query: 335 GGDGEEKNIVSHLTEAPVPGTTLGIVRV 362
+K+++ T + PGTTL + +
Sbjct: 190 -----DKDVI---TTSRFPGTTLDKIEI 209
>gi|358371353|dbj|GAA87961.1| hypothetical protein AKAW_06075 [Aspergillus kawachii IFO 4308]
Length = 661
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 120/509 (23%), Positives = 209/509 (41%), Gaps = 113/509 (22%)
Query: 38 LKAPTSSSSSSSFSSQP---TNTAPP----PLSSSLALTRDGNYDEATPKLTV----CPG 86
L+ P ++++ FSS+P T P S+S+ L R E T + V CPG
Sbjct: 26 LRKPCLRTTTAIFSSRPEILARTDVPVQLRSFSTSIPL-RASPAPEPTIEEAVLPVCCPG 84
Query: 87 CGVLMQDTNPKHPGYFIRPSQNLNKV--RKSHLVHVANESEFSNSLKK------------ 132
CG Q P PGY+ + + K+ +V E + LK
Sbjct: 85 CGAYAQTVEPSEPGYYGKTRKQTRKLLSETKQVVEGEGNGEEGSGLKAEGEKAADRIQKY 144
Query: 133 ---------------GGLVVFEAENETSEVKKHEKPV-VCARCHALRHYGKVKDVTVENL 176
G +V A+ ++K + PV +C RCH L H+ K V +
Sbjct: 145 LELTDVGGSVPRPKFGASLVKAADTAGKYLEKSKAPVQICDRCHDLLHHNKA----VPAI 200
Query: 177 LPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKM--VSDTAEENERA--- 231
P + ++ L + + + VVDAADF S +++ + D +N R+
Sbjct: 201 SPTME---SLRAYLDESPHKHNRIYHVVDAADFPMSVVKEIYDTLGIMDPRSKNRRSATY 257
Query: 232 -WKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE-HWVRQRARED-GIS----KITKLHFV 284
+K GK +P + V+ + DLL ++ + +VR R+ G+S ++ +H +
Sbjct: 258 KYKSGK--KLPTISFVINRSDLLAATKEQVDSKMEYVRSVLRDTLGLSHEEFRLGNVHMI 315
Query: 285 SAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNA-----------IAKSVDAG 333
SA + W K + +++ + G +W IG N GKS+ + A IA+ ++
Sbjct: 316 SAQRGWWTKKVKEEIREHGG---GIWVIGKANVGKSSFIEACFPKDSRNLEKIAELIELR 372
Query: 334 RGGDGEEKNIVSH-----------LTEAP-------------VPGTTLGIVRVEGVLPAQ 369
EE I +H L AP +PGTT+ +R+ +
Sbjct: 373 E----EESIIATHYDTSAIDSEGLLPPAPREDLYPILPVVSSLPGTTVSPIRIP-FGRGR 427
Query: 370 AKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESS 429
++ D PGL ++ + E ++ + + K KP IK G S+ + + + ++
Sbjct: 428 GEMIDLPGLER-GELADHVRDEFKRDLIMTKRKKPERLSIKPGQSLLLG-GGLVRITPTN 485
Query: 430 VESIYVTVWASPYLPL--HMGKTENACTM 456
E + V A+ ++PL H+ +TE A M
Sbjct: 486 PEDV---VMAACFVPLESHLTRTEKAIEM 511
>gi|109074713|ref|XP_001082521.1| PREDICTED: uncharacterized protein C4orf14 isoform 4 [Macaca
mulatta]
gi|355687403|gb|EHH25987.1| hypothetical protein EGK_15861 [Macaca mulatta]
Length = 698
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 88/170 (51%), Gaps = 6/170 (3%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ N I LT +E +V + + PRT+ +K G + + + R+D + + +
Sbjct: 494 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 552
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEK-RVEELGKWVRKEFHVSG 489
S + TV AS LP+H+ + A T+ +KH G LQ P+G K R+ V ++ + G
Sbjct: 553 SAWFTVVASNTLPVHITSLDRADTLYQKHAGHTLLQVPMGGKERMAGFPPLVAEDIMLKG 612
Query: 490 SSWDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPY 536
S +V DI + GW SV +K L +T EG + +R LLPY
Sbjct: 613 GRGGSEAVADIKFSSAGWVSVTPNVKDRLHLRGYTPEGTVLTVRPPLLPY 662
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA +G++ LI + RG+V+ +GA NAGKSTL N + +S +G
Sbjct: 310 VRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCTAKGS 369
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN--QITTRLTREEQK 394
+ ++ +S P PGTTL +++ P + F L + Q L+ +EQ
Sbjct: 370 EAIDRATIS-----PWPGTTLNLLKFPICNPTPYRRFKRHQRLKKDSTQAEEDLSEQEQN 424
Query: 395 LVNINKE 401
+N+ K+
Sbjct: 425 QLNVLKK 431
>gi|325189773|emb|CCA24254.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 556
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 108/246 (43%), Gaps = 58/246 (23%)
Query: 84 CPGCGVLMQDTNPKHPGYF-IRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
CPGCG+ +Q P G+ +R QN+ + +NES F L+K
Sbjct: 37 CPGCGIPLQYRTPSDLGFVPLRALQNVTE---------SNESIFFQ-LRK---------- 76
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMS--ASGARSVV 200
V C RC+ + +GK+K + F ++ T G+ L +S + ++
Sbjct: 77 -----------VRCERCYQMEVHGKLK------VQRQFSYE-TFGKLLKDELSSNSNVLL 118
Query: 201 LMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPT 260
L +VD D GS RA+ G +V+L+V K DL+P
Sbjct: 119 LQLVDILDIPGSL-----------LSTAHRAF-----GTDRQVMLIVNKGDLIPLKSGTR 162
Query: 261 RFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKS 320
R ++Q+A+ GI I ++ VSA+K G+ ++ D+ R ++ IGA N GKS
Sbjct: 163 RLMRHIQQQAKSAGIQNIQAIYLVSALKGIGMHEILRDIKKFRKNR-DLCVIGAANVGKS 221
Query: 321 TLLNAI 326
T LN+
Sbjct: 222 TFLNSF 227
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 91/224 (40%), Gaps = 37/224 (16%)
Query: 347 LTEAPVPGTTLGIVRVEGVLPAQAKLF---DTPGLLHPNQ----ITTRLTREEQKLVNI- 398
LT +P+PGTTL + + V A KLF DTPGL+ + + T L N+
Sbjct: 324 LTTSPLPGTTLAVQYIPVV--ANNKLFNIIDTPGLIEDTKRQQLVEVLATDASNALRNVF 381
Query: 399 -NKELKPRTYRIKAGHSIHIAGLMRMD-VEESSVESIYVTVWASPYLPLHMGKTENACTM 456
K L YR+K S+ + L R D + + W LP H+ KT NA M
Sbjct: 382 PTKTLPATIYRLKPNQSLFLGALARFDYISPGENRDQLLFCWHG-VLPGHVTKTANAEAM 440
Query: 457 VEKHFGRQLQPPIG-----------EKRVEELGKWVRK-EFHVSGSSWDSSSVDIAAAGL 504
KH G+ L PP G + + L +V + + S SS V++ G
Sbjct: 441 FIKHAGKILSPPRGLNALSFTGPLKDAQTITLSDYVTESQSQKSKRPQRSSLVELVLPGF 500
Query: 505 GWFSV------------RLKGEAALGVWTYEGVDIVLRNALLPY 536
GW SV R A + + G+ I+ R L P+
Sbjct: 501 GWCSVTAVDFDGTQAAARTLSRAKVRIAECLGLQILPRPPLFPF 544
>gi|302565204|ref|NP_001180617.1| nitric oxide-associated protein 1 [Macaca mulatta]
Length = 631
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 95/187 (50%), Gaps = 9/187 (4%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ N I LT +E +V + + PRT+ +K G + + + R+D + + +
Sbjct: 427 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 485
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEK-RVEELGKWVRKEFHVSG 489
S + TV AS LP+H+ + A T+ +KH G LQ P+G K R+ V ++ + G
Sbjct: 486 SAWFTVVASNTLPVHITSLDRADTLYQKHAGHTLLQVPMGGKERMAGFPPLVAEDIMLKG 545
Query: 490 SSWDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGF 546
S +V DI + GW SV +K L +T EG + +R LLPY + + G
Sbjct: 546 GRGGSEAVADIKFSSAGWVSVTPNVKDRLHLRGYTPEGTVLTVRPPLLPY---IVNIKGE 602
Query: 547 TVSKIIS 553
+ K ++
Sbjct: 603 RIKKSVA 609
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA +G++ LI + RG+V+ +GA NAGKSTL N + +S +G
Sbjct: 243 VRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCTAKGS 302
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN--QITTRLTREEQK 394
+ ++ +S P PGTTL +++ P + F L + Q L+ +EQ
Sbjct: 303 EAIDRATIS-----PWPGTTLNLLKFPICNPTPYRRFKRHQRLKKDSTQAEEDLSEQEQN 357
Query: 395 LVNINKE 401
+N+ K+
Sbjct: 358 QLNVLKK 364
>gi|398411774|ref|XP_003857223.1| hypothetical protein MYCGRDRAFT_53492, partial [Zymoseptoria
tritici IPO323]
gi|339477108|gb|EGP92199.1| hypothetical protein MYCGRDRAFT_53492 [Zymoseptoria tritici IPO323]
Length = 566
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 160/403 (39%), Gaps = 66/403 (16%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKK-GGLVVFEAE 141
VCPGCG L Q P GY+ + VRK ++ F ++ + G +
Sbjct: 93 VCPGCGALSQTVVPDAAGYYTERRKREKSVRKK-----GEDAVFREAIARLEGKASAQVP 147
Query: 142 NETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVL 201
E E + +C RCH L H K + + ++ ++ + S+ + +
Sbjct: 148 PEQPEAETKPASPICDRCHDLIHQSKGQSIVHPSM-------QSIQAIIESSPHKHNHIY 200
Query: 202 MVVDAADFDGSF------PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLL-P 254
V+DAADF S + ++ + R + G+ V V ++T+ DLL P
Sbjct: 201 HVIDAADFPLSLIPNLMSALDLPRLRTQNRRSKSRTYTRGR---VADVSFIITRSDLLAP 257
Query: 255 SSLSPTRFEHWVRQRAREDGISKITK------LHFVSAVKNWGLKSLIDDVVDLAGKRGN 308
R +++ R D + + K L VSA + W S+ ++ D + G
Sbjct: 258 KKEQVDRLMPYLQDVLR-DALGRTGKNVRLGSLRCVSAKRGWWTPSVKKEIWD---RGGA 313
Query: 309 VWAIGAQNAGKSTLLNAI-------------AKSVDAGRGGDGEEKNIVSHL------TE 349
W +G N GKS L + +S + G E+++ +S L T+
Sbjct: 314 GWVVGKVNVGKSALYEVVFPKGSSEHVDVKALRSAEGRFGAKEEDEDELSLLPPAQPETQ 373
Query: 350 AP-------VPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKEL 402
P +PGTT +R+ + +L D PG+ + + T + E + + +
Sbjct: 374 YPQMPTVSALPGTTASPIRIP-YGKGRGELIDLPGVQR-SSLETHIQPEHHASLVMKSRV 431
Query: 403 KPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPL 445
P + +K G S+ + G++R+ + + A P+ PL
Sbjct: 432 TPEQHTLKPGQSLLLGGIIRITPKTDD-----LVFLAYPFTPL 469
>gi|134075467|emb|CAK48028.1| unnamed protein product [Aspergillus niger]
Length = 647
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 177/451 (39%), Gaps = 106/451 (23%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKV--RKSHLVHVANESEFSNSLKK-------- 132
CPGCG Q P PGY+ + + K+ V E LK
Sbjct: 76 CCPGCGAYAQTVEPSEPGYYGKTRKQTRKLLSETKQFVEGEENGEEGKGLKAEGEKAADR 135
Query: 133 ----------GGLVVFEAENETSEVKKHEKPV-VCARCHALRHYGKVKDVTVENLLPDFD 181
GG V ++K + PV +C RCH L H+ K V + P D
Sbjct: 136 IQKYLELTDVGGSVPRPKYTAGKYLEKSKAPVPICDRCHDLLHHNK----AVPAISPTMD 191
Query: 182 FDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKM--VSDTAEENERA----WKEG 235
++ L + + + VVDAADF S + + + D +N R+ +K G
Sbjct: 192 ---SLRAYLDESPHNHNRIYHVVDAADFPMSVVKDIYTTLGIMDPRSKNRRSATYKYKSG 248
Query: 236 KSGNVPRVVLVVTKIDLLPSSLSPTRFE-HWVRQRARED-GIS----KITKLHFVSAVKN 289
K +P + V+ + DLL ++ + +VR R+ G+S ++ +H +SA +
Sbjct: 249 K--KLPTISFVINRSDLLAATKEQVDSKMEYVRSVLRDTFGLSHEEFRLGNVHMISAQRG 306
Query: 290 WGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNA-----------IAKSVDAGRGGDG 338
W K + +++ + G +W +G N GKS+ + A IA+ ++
Sbjct: 307 WWTKKVKEEIREHG---GGIWVVGKANVGKSSFIEACFPKDSRNLEKIAELIELRE---- 359
Query: 339 EEKNIVSH-----------LTEAP-------------VPGTTLGIVRVEGVLPAQAKLFD 374
EE + +H L AP +PGTT+ +R+ + ++ D
Sbjct: 360 EESRMATHFDSSAIDSEGLLPPAPREDLYPILPVVSSLPGTTVSPIRIP-FGRGRGEMID 418
Query: 375 TPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHS-------IHIAGLMRMDVEE 427
PGL ++ + E ++ + + K KP IK G S + I + DV
Sbjct: 419 LPGLDR-GELADHVRDEFKRDLIMTKRKKPERLSIKPGQSLLLGGGLVRITPVNPEDV-- 475
Query: 428 SSVESIYVTVWASPYLPL--HMGKTENACTM 456
V A+ ++PL H+ +TE A M
Sbjct: 476 ---------VMAACFVPLETHLTRTEKAIEM 497
>gi|170576186|ref|XP_001893531.1| RE23670p [Brugia malayi]
gi|158600406|gb|EDP37634.1| RE23670p, putative [Brugia malayi]
Length = 931
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 24/224 (10%)
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE- 431
FDTPG ++ NQI T +E + + PRT+ + + S+ IAG+ ++DV V+
Sbjct: 708 FDTPGTVNSNQILNLFTLDELITILPRTLILPRTFIMHSEESLLIAGVAQIDVISLPVKS 767
Query: 432 -----------SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELG 478
SI +TV+AS LP+ + KT + EK+ G L P +R+
Sbjct: 768 TSEKDYPERRPSILMTVFASEQLPVFIRKTSESSAFREKYLGSSLLVVPAGNAERIARFP 827
Query: 479 KWVRKEFHVSGS-SWDSSSVDIAAAGLGWFSV-RLKGEAALGVWTYEGVDIVLRN-ALLP 535
E + S SW D+ + LGW V +GE L +T EG + LR ALLP
Sbjct: 828 DLKSSEMVLESSGSWKGCG-DVVLSSLGWVCVTSRRGEVRLQAYTPEGRGLFLRTPALLP 886
Query: 536 YRSQ-----VFEVAGFTVSK-IISKADQSLNKSKRLNEAKRKPR 573
Y +Q + A + V + ++ D S + KR +KR+ +
Sbjct: 887 YCAQLRGSRIGGTAAYKVKRPVLPDPDASRKQRKRKTSSKRRAK 930
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 39/229 (17%)
Query: 155 VCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFP 214
+C RC+ L+ + + +V V + D+ H++ + L A ++++VVD D GS
Sbjct: 421 LCRRCYMLKRHNFLLNVNV----CEVDY-HSMMKHLKLKQEA--LIILVVDMCDLPGSIY 473
Query: 215 RKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHW---VRQRAR 271
++ K++ G +++V K+DLLP H+ + +
Sbjct: 474 SELPKII----------------GYQKPMIVVGNKVDLLPPDAHRGFLRHFRQVLHGLLK 517
Query: 272 EDGIS---KITKLHFVSAVKNWGLKSLIDDVVDLAGKR----GNVWAIGAQNAGKSTLLN 324
E G I + +SA +G++ LI ++ R +++ +G NAGKSTL N
Sbjct: 518 ETGFVDNFNILHMSLISAKTGYGVEDLITNIFLRFSTRDTLRNDMYLVGCTNAGKSTLFN 577
Query: 325 AIAKS-VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKL 372
A+ +S + R D +V P PGTT+ +++ + P+ KL
Sbjct: 578 ALLQSDLCKVRAVD-----LVERAATTPWPGTTISLLKFPVMNPSPHKL 621
>gi|348511900|ref|XP_003443481.1| PREDICTED: uncharacterized protein C4orf14 homolog [Oreochromis
niloticus]
Length = 630
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
L+DTPG++ I L +E +LV + + PRT+ +K G S+ + L R+D + +
Sbjct: 418 LYDTPGIMKELDILNLLHEQEVRLVVPTQAIVPRTFVLKPGTSLFVGALARIDFLQGE-K 476
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELGKWVRKEFHVSG 489
S + +V AS +P+H+ E A ++ EKH G L P G +R++E V +EF + G
Sbjct: 477 SCWFSVVASDRVPVHITSLEKADSIYEKHGGHMLLGVPVGGSERMKEFPALVPQEFSLEG 536
Query: 490 SSWDSSSVDIAAAGLGWFSV 509
+ ++ DI + GW +V
Sbjct: 537 RGYLEAAADIKLSSAGWVAV 556
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 122/295 (41%), Gaps = 66/295 (22%)
Query: 82 TVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAE 141
T C GCG ++ T PGY P++ KV + E S +
Sbjct: 95 TCCSGCGAVLHCTAAAVPGYL--PNEKY-KV-------LVQEGRLSGA------------ 132
Query: 142 NETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVL 201
C RCH L H+ K ++ LP + V R++ +++
Sbjct: 133 -------------TCQRCHLLTHHHKALNLQ----LPKDQYRDVV-RQIRPHKALVLLIV 174
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP--SSLSP 259
++D D ++ D E G +V++ KIDLLP S
Sbjct: 175 DLLDLPD----------SIIPDLPE---------LVGRNKHIVVLGNKIDLLPGDSQNYL 215
Query: 260 TRFEHWVRQRAREDGI-SKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAG 318
R + + Q ++ G ++T +H +SA +G++ LI + +G+V+ +G+ NAG
Sbjct: 216 QRLKRQLSQYCKDAGFGDQVTDVHLISAKTGYGIEELISSLQRSWKYKGDVYLVGSANAG 275
Query: 319 KSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLF 373
KSTL N + +S D + N++ T +P PGTTL +++ + P ++F
Sbjct: 276 KSTLFNTLLES-DYCK---SRASNVIHKATISPWPGTTLNLLKFPIINPTPYRMF 326
>gi|169770195|ref|XP_001819567.1| hypothetical protein AOR_1_654154 [Aspergillus oryzae RIB40]
gi|83767426|dbj|BAE57565.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391867578|gb|EIT76824.1| hypothetical protein Ao3042_07315 [Aspergillus oryzae 3.042]
Length = 658
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 121/289 (41%), Gaps = 61/289 (21%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNK----------VRKSHLVHVAN---------- 122
CPGCG Q P PGY+ + + K V+ VA+
Sbjct: 80 CCPGCGAYAQTIEPGEPGYYSKTRKQTRKLLSETERATGVQDGETGEVADLKTEGEKAAG 139
Query: 123 -------ESEFSNSLKK---GGLVVFEAENETSEVKKHEKPV-VCARCHALRHYGKVKDV 171
ESE + K G L+ A ++K PV VC RCH L H+ K
Sbjct: 140 TIQQLIKESEEEAAAPKPIHGALLENAAATAKEYIEKSRPPVQVCDRCHDLVHHNKA--- 196
Query: 172 TVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVS--DTAEENE 229
V + P +++G L + + + V+DAADF S + + +S + N
Sbjct: 197 -VPAISPTI---YSIGAYLDESPYKYNRIYHVIDAADFPMSLVDNIYEALSIEEQRSRNR 252
Query: 230 RAWKEGKSGN--VPRVVLVVTKIDLLPSSLSPTRFE-----HWVRQRAREDGISKITK-- 280
RA E G +P + ++T+ DLL +PT+ + +VR RE ++K T+
Sbjct: 253 RASTEKYRGGKKLPTISFIITRSDLL----APTKEQVDSKMEYVRSVLRE-ALAKSTENF 307
Query: 281 ----LHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNA 325
+H +SA + W K + +++ + G VW +G N GKS+ + A
Sbjct: 308 RLGNVHMISAHRGWWTKKVKEEIKNHGG---GVWVVGKANVGKSSFIEA 353
>gi|82793285|ref|XP_727980.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23484093|gb|EAA19545.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 1768
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 126/257 (49%), Gaps = 16/257 (6%)
Query: 305 KRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEG 364
K N++ +G N+GKSTL+N + K++ + N ++ + +PGTTL ++++
Sbjct: 1519 KNVNLYIVGNANSGKSTLINYLLKNL-SNEKNKNMNSNNNFLISNSIIPGTTLKNIKIK- 1576
Query: 365 VLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELK--PRTYRIKAGHSIHIAGLMR 422
L + DTPG++ N I + L +E K V K K P Y I I I G++
Sbjct: 1577 -LNKNLTINDTPGIISNNSILSYLNFDEMKYVVCTKMKKKIPSIY-INENDYIFIGGIVY 1634
Query: 423 MDVEESSVESIY--VTVWASPYLPLHMGK--TENACTMVEKHFGR-QLQPPIGEKRVEEL 477
+++ +++ Y ++ + S +P+ K +++ ++K L PP R E+
Sbjct: 1635 INI--LNIKKYYSIMSFFMSDKIPIIKRKRFSKDPKEFLKKKIQSGYLYPPFSVDRFNEI 1692
Query: 478 GKWVRKEFHVSG--SSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLP 535
+ + F+++ + D+SS DI G+G + ++T + VD+V R +L+P
Sbjct: 1693 NDYKKCYFNINNPYVNIDNSSYDIHIQGMGCITFYSFQNIEFDLYTLKNVDVVGRPSLMP 1752
Query: 536 YRSQVFEVAGFTVSKII 552
Y + + + F+V K I
Sbjct: 1753 YHKK-YGMLDFSVKKKI 1768
>gi|350630151|gb|EHA18524.1| hypothetical protein ASPNIDRAFT_55691 [Aspergillus niger ATCC 1015]
Length = 985
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 178/453 (39%), Gaps = 108/453 (23%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKV--RKSHLVHVANESEFSNSLKKGGLVVFE- 139
CPGCG Q P PGY+ + + K+ V E LK G +
Sbjct: 412 CCPGCGAYAQTVEPSEPGYYGKTRKQTRKLLSETKQFVEGEENGEEGKGLKAEGEKAADR 471
Query: 140 -------------------AENETSEVKKHEKPV-VCARCHALRHYGKVKDVTVENLLPD 179
A+ ++K + PV +C RCH L H+ K V + P
Sbjct: 472 IQKYLELTDVGGSVPRPKSADTAGKYLEKSKAPVQICDRCHDLLHHNKA----VPAISPT 527
Query: 180 FDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKM--VSDTAEENERA----WK 233
D ++ L + + + VVDAADF S + + + D +N R+ +K
Sbjct: 528 MD---SLRAYLDESPHNHNRIYHVVDAADFPMSVVKDIYTTLGIMDPRSKNRRSATYKYK 584
Query: 234 EGKSGNVPRVVLVVTKIDLLPSSLSPTRFE-HWVRQRARED-GIS----KITKLHFVSAV 287
GK +P + V+ + DLL ++ + +VR R+ G+S ++ +H +SA
Sbjct: 585 SGK--KLPTISFVINRSDLLAATKEQVDSKMEYVRSVLRDTFGLSHEEFRLGNVHMISAQ 642
Query: 288 KNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNA-----------IAKSVDAGRGG 336
+ W K + +++ + G +W +G N GKS+ + A IA+ ++
Sbjct: 643 RGWWTKKVKEEIREHG---GGIWVVGKANVGKSSFIEACFPKDSRNLEKIAELIELRE-- 697
Query: 337 DGEEKNIVSH-----------LTEAP-------------VPGTTLGIVRVEGVLPAQAKL 372
EE + +H L AP +PGTT+ +R+ + ++
Sbjct: 698 --EESRMATHFDSSAIDSEGLLPPAPREDLYPILPVVSSLPGTTVSPIRIP-FGRGRGEM 754
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHS-------IHIAGLMRMDV 425
D PGL ++ + E ++ + + K KP IK G S + I + DV
Sbjct: 755 IDLPGLDR-GELADHVRDEFKRDLIMTKRKKPERLSIKPGQSLLLGGGLVRITPVNPEDV 813
Query: 426 EESSVESIYVTVWASPYLPL--HMGKTENACTM 456
V A+ ++PL H+ +TE A M
Sbjct: 814 -----------VMAACFVPLETHLTRTEKAIEM 835
>gi|238487416|ref|XP_002374946.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
gi|220699825|gb|EED56164.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
Length = 658
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 121/289 (41%), Gaps = 61/289 (21%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNK----------VRKSHLVHVAN---------- 122
CPGCG Q P PGY+ + + K V+ VA+
Sbjct: 80 CCPGCGAYAQTIEPGEPGYYSKTRKQTRKLLSETERATGVQDGETGEVADLKTEGEKAAG 139
Query: 123 -------ESEFSNSLKK---GGLVVFEAENETSEVKKHEKPV-VCARCHALRHYGKVKDV 171
ESE + K G L+ A ++K PV VC RCH L H+ K
Sbjct: 140 TIQQLIKESEEEAAAPKPIHGALLENAAATAKEYIEKSRPPVQVCDRCHDLVHHNKA--- 196
Query: 172 TVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVS--DTAEENE 229
V + P +++G L + + + V+DAADF S + + +S + N
Sbjct: 197 -VPAISPTI---YSIGAYLDESPYKYNRIYHVIDAADFPMSLVDNIYEALSIEEQRSRNR 252
Query: 230 RAWKEGKSGN--VPRVVLVVTKIDLLPSSLSPTRFE-----HWVRQRAREDGISKITK-- 280
RA E G +P + ++T+ DLL +PT+ + +VR RE ++K T+
Sbjct: 253 RASTEKYRGGKKLPTISFIITRSDLL----APTKEQVDSKMEYVRSVLRE-ALAKSTENF 307
Query: 281 ----LHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNA 325
+H +SA + W K + +++ + G VW +G N GKS+ + A
Sbjct: 308 RLGNVHMISAHRGWWTKKVKEEIKNHGG---GVWVVGKANVGKSSFIEA 353
>gi|84000349|ref|NP_001033277.1| nitric oxide-associated protein 1 [Bos taurus]
gi|93204548|sp|Q32LB9.1|NOA1_BOVIN RecName: Full=Nitric oxide-associated protein 1
gi|81673530|gb|AAI09655.1| Chromosome 4 open reading frame 14 ortholog [Bos taurus]
Length = 694
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 6/170 (3%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ N I + LT +E +V + PRT+ +K G + + L R+D + + +
Sbjct: 495 FYDTPGITKENCILSLLTEKEVNIVLPTHSIIPRTFMLKPGMVLFLGALGRIDFLKGN-Q 553
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELGKWVRKEFHVSG 489
S + TV AS +LP+H+ + A TM +KH G L P GE+R+ V ++ +
Sbjct: 554 SAWFTVVASNFLPVHITSLDKADTMYQKHAGHTLLKVPVGGEERMAGFPPLVAEDITLDE 613
Query: 490 SSWDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPY 536
+S +V DI + GW +V + K L +T +G + +R LLP+
Sbjct: 614 GLGESEAVADIKLSSAGWVAVTPQFKDTLTLRGYTPQGTVLTVRRPLLPH 663
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA +G++ LI + RG+V+ +G+ NAGKSTL N + +S +G
Sbjct: 311 LRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGSTNAGKSTLFNTLLESDYCIAKGA 370
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR--LTREEQK 394
+ ++ +S P PGTTL +++ P ++F L + L+++EQ
Sbjct: 371 EAIDRATIS-----PWPGTTLNLLKFPICNPTPYRMFQRQKRLKRDATEAEEDLSQQEQN 425
Query: 395 LVNINKE 401
+N+ K+
Sbjct: 426 KLNLLKK 432
>gi|68070655|ref|XP_677239.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497276|emb|CAH97846.1| conserved hypothetical protein [Plasmodium berghei]
Length = 1051
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 124/254 (48%), Gaps = 16/254 (6%)
Query: 308 NVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP 367
N++ +G N+GKSTL+N + KS+ N ++ + +PGTTL ++++ L
Sbjct: 805 NLYIVGNANSGKSTLINYLLKSL-TKEKSKNMNSNNNFLISNSIIPGTTLKNIKIK--LN 861
Query: 368 AQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELK--PRTYRIKAGHSIHIAGLMRMDV 425
+ DTPG++ N I + L +E K V K K P Y I I I G++ +++
Sbjct: 862 NNLTINDTPGIISNNSILSYLNFDEMKYVVCTKLKKKIPSIY-INENDYIFIGGIVYINI 920
Query: 426 EESSVESIY--VTVWASPYLPLHMGK--TENACTMVEKHFGR-QLQPPIGEKRVEELGKW 480
+++ Y ++ + S +P+ K +++ ++K + PP R E+ +
Sbjct: 921 --LNIKKYYSIMSFFMSDKIPIIKRKRFSKDPKEFLKKKIQSGYIYPPFSVDRFNEISDF 978
Query: 481 VRKEFHVSG--SSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPYRS 538
+ F+++ + D+SS DI GLG + ++T + VD++ R +L+PY
Sbjct: 979 KKCHFNINNPYVNTDNSSYDIHIQGLGCITFYSFQNIEFDLYTLKNVDVIGRPSLMPYHK 1038
Query: 539 QVFEVAGFTVSKII 552
+ + + F+V K I
Sbjct: 1039 K-YGMLDFSVKKKI 1051
>gi|327308988|ref|XP_003239185.1| hypothetical protein TERG_01167 [Trichophyton rubrum CBS 118892]
gi|326459441|gb|EGD84894.1| hypothetical protein TERG_01167 [Trichophyton rubrum CBS 118892]
Length = 618
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 150/339 (44%), Gaps = 43/339 (12%)
Query: 3 SRARNISQSKLKPIFHESF-LTKITSPYLQLHPTKALKAPTSSSSSSSFSSQPTNTAPPP 61
S++RNI PI H + + S + L P +A S SS++F P
Sbjct: 8 SQSRNILHRS--PITHRKYTFIRCLSEWRALQPYRA-----SFPSSTAFPLAPRQQRQHN 60
Query: 62 LSSSLALTRDGNYDEATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVA 121
+ SL T A P C GCG L Q PK PGY+ K K ++ H+
Sbjct: 61 STESLQTTGKDLETWALPD--TCHGCGALTQWVYPKEPGYYT----VTRKPVKQYIRHIT 114
Query: 122 NESEFSNSLKKGGLVVFEAE-NETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDF 180
+ + + + +E + + S+ +H +C RCH L ++G+ + + L
Sbjct: 115 QGKQ--SDVDASPIAAYENKPAQESKEPEHIAIPLCDRCHNLINHGEGEAIPYPTL---- 168
Query: 181 DFDHTVGRKLMSASGAR-SVVLMVVDAADFDGSFPRKVAKMVSDTAE--ENERAW--KEG 235
+ R L+ S + + VVDAADF S + + V + +N R+ K G
Sbjct: 169 ----SYIRDLIEESPFHNNYIYHVVDAADFPLSVIPNLQRYVPIQPQRSQNRRSHTKKYG 224
Query: 236 KSGNVPRVVLVVTKIDLLPSSLSP---TRFEHWV---RQRA--REDGISKITKLHFVSAV 287
S + + V+T+ DLL S++ P + +H V RQ +E GI ++ +H VS+
Sbjct: 225 SSRYLAELNFVITRADLL-SNVKPQADSLMKHMVEILRQTLDRKEHGI-RLGNVHMVSSY 282
Query: 288 KNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAI 326
+ W K + D+ + + G VW +G N GKS L+ ++
Sbjct: 283 RGWWTKEIKQDIWN---QGGGVWMVGKVNVGKSKLITSV 318
>gi|296486559|tpg|DAA28672.1| TPA: hypothetical protein LOC539773 [Bos taurus]
gi|440903359|gb|ELR54030.1| hypothetical protein M91_21392 [Bos grunniens mutus]
Length = 694
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 6/170 (3%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ N I + LT +E +V + PRT+ +K G + + L R+D + + +
Sbjct: 495 FYDTPGITKENCILSLLTEKEVNIVLPTHSIIPRTFMLKPGMVLFLGALGRIDFLKGN-Q 553
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELGKWVRKEFHVSG 489
S + TV AS +LP+H+ + A TM +KH G L P GE+R+ V ++ +
Sbjct: 554 SAWFTVVASNFLPVHITSLDKADTMYQKHAGHTLLKVPVGGEERMAGFPPLVAEDITLDE 613
Query: 490 SSWDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPY 536
+S +V DI + GW +V + K L +T +G + +R LLP+
Sbjct: 614 GLGESEAVADIKFSSAGWVAVTPQFKDTLTLRGYTPQGTVLTVRRPLLPH 663
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA +G++ LI + RG+V+ +G+ NAGKSTL N + +S +G
Sbjct: 311 LRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGSTNAGKSTLFNTLLESDYCIAKGA 370
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR--LTREEQK 394
+ ++ +S P PGTTL +++ P ++F L + L+++EQ
Sbjct: 371 EAIDRATIS-----PWPGTTLNLLKFPICNPTPYRMFQRQKRLKRDATEAEEDLSQQEQN 425
Query: 395 LVNINKE 401
+N+ K+
Sbjct: 426 KLNLLKK 432
>gi|90085443|dbj|BAE91462.1| unnamed protein product [Macaca fascicularis]
Length = 631
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 9/187 (4%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ N I LT +E +V + + PRT+ +K G + + + R+D + + +
Sbjct: 427 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 485
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPI-GEKRVEELGKWVRKEFHVSG 489
S + TV AS LP+H+ + A T+ +KH G LQ P+ G +R+ V ++ +
Sbjct: 486 SAWFTVVASNTLPVHITSLDRADTLYQKHAGHTLLQVPMGGRERMAGFPPLVAEDIMLKE 545
Query: 490 SSWDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGF 546
S +V DI + GW SV +KG L +T EG + +R LLPY + + G
Sbjct: 546 GRGGSEAVADIKFSSAGWVSVTPNVKGRLHLRGYTPEGTVLTVRPPLLPY---IVNIKGE 602
Query: 547 TVSKIIS 553
+ K ++
Sbjct: 603 RIKKSVA 609
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA +G++ LI + RG+V+ +GA NAGKSTL N + +S +G
Sbjct: 243 VRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCTAKGS 302
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN--QITTRLTREEQK 394
+ ++ +S P PGTTL +++ P + F L + Q L+ +EQ
Sbjct: 303 EAIDRATIS-----PWPGTTLNLLKFSICNPTPYRRFKRHQRLKKDSTQAEEDLSEQEQN 357
Query: 395 LVNINKE 401
+N+ K+
Sbjct: 358 QLNVLKK 364
>gi|5541712|emb|CAB51217.1| putative protein [Arabidopsis thaliana]
Length = 441
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 129/312 (41%), Gaps = 71/312 (22%)
Query: 81 LTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEA 140
++ C GCG +Q ++ PG+ LV +E
Sbjct: 105 VSCCYGCGAPLQTSDVDSPGFV-------------------------------DLVTYEL 133
Query: 141 ENETSEVKKHE--KPVVCARCHALRHYGKVKDVTVENLL---PDFDFDHTVGRKLMSASG 195
+ KKH + ++C RC L H + V F + KL
Sbjct: 134 K------KKHHQLRTMICGRCQLLSHGHMITAVGGNGGYPGGKQFVSADELREKLSHLRH 187
Query: 196 ARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS 255
+++++ +VD DF+GSF +V +V G P ++LV+TKIDLLP
Sbjct: 188 EKALIVKLVDIVDFNGSFLARVRDLV----------------GANP-IILVITKIDLLPK 230
Query: 256 SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQ 315
WV + ++ + +H S+ G+ + ++ R +V+ +GA
Sbjct: 231 GTDMNCIGDWVVEVTMRKKLN-VLSVHLTSSKSLDGVSGVASEIQKEKKGR-DVYILGAA 288
Query: 316 NAGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKL 372
N GKS +NA+ K++ D + K I ++ VPGTTLG +++ + + KL
Sbjct: 289 NVGKSAFINALLKTMAERDPVAAAAQKYKPI-----QSAVPGTTLGPIQINAFVGGE-KL 342
Query: 373 FDTPGL-LHPNQ 383
+DTPG+ LH Q
Sbjct: 343 YDTPGVHLHHRQ 354
>gi|452003482|gb|EMD95939.1| hypothetical protein COCHEDRAFT_1089842 [Cochliobolus
heterostrophus C5]
Length = 751
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 145/352 (41%), Gaps = 46/352 (13%)
Query: 18 HESFLTKITSPYLQLHP-TKALKAPTSSSSSSSFS-SQPTNTAPPPLSSSLALTRDGNYD 75
HE+ + P L P T + P+ + SS+ FS S+P + +++ LT +
Sbjct: 14 HEASIPLFLCPALLRAPITTTRRGPSRAKSSTHFSTSRPIKDQ---VRAAVPLTETPDAS 70
Query: 76 EATPKLT-----VCPGCGVLMQDTNPKHPGYF----------IRPSQNLNKVRKSHLVHV 120
P + CPGCG Q GY+ + P N+ K + HV
Sbjct: 71 PQNPPASRSLPRACPGCGAPAQIYEQNEAGYYDIDRKAVRAYLNPVPNIPKDMGTQEDHV 130
Query: 121 ANESEFSNSLKK--GGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLP 178
E SN + G L + + E + + VC RCH+L H+ + + P
Sbjct: 131 Y-EKALSNVDPQLLGELGIAKEEKQVPDDNDPPPTPVCDRCHSLLHHRRGSPIH----HP 185
Query: 179 DFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF-PRKVAKM-VSDTAEENERAWKEGK 236
D + + + + R+ + VVDAADF S P + + + +N RA +G
Sbjct: 186 TVD---AIQQTIAESPHRRNHIYHVVDAADFPLSIVPNLQSSLRIPKLRTQNRRAKHKGW 242
Query: 237 SGN--VPRVVLVVTKIDLL-PSSLSPTRFEHWVRQ-----RAREDGISKITKLHFVSAVK 288
N + V ++T+ DLL P +VR R++ +++ + VSA +
Sbjct: 243 VANDRIAEVSFIITRSDLLAPKKEQVDALMPYVRDVLRDALGRQNANARLGNVRLVSAKR 302
Query: 289 NWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEE 340
W K + +D+ D + G W +G N GKS L A+ GRG D ++
Sbjct: 303 GWWTKQVKEDIWD---RGGAGWMVGKVNVGKSNLFEAV---FPKGRGADYQD 348
>gi|384485424|gb|EIE77604.1| hypothetical protein RO3G_02308 [Rhizopus delemar RA 99-880]
Length = 259
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 38/260 (14%)
Query: 120 VANESEFSNSLKKGGLV----VFEAENETSEVKKH--EKPVVCARCHALRHYGKVKDVTV 173
+AN E S +L +G V + E E E +VK+ K ++C RCH L HY K T
Sbjct: 1 MANLDEDSRALLEGSAVTEIDMKEKEREEEQVKQQTLSKRIICQRCHELHHYHK---STT 57
Query: 174 ENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGS---FPRKVAKMVSDTAEENER 230
E+ G + +V+ V D D GS P+ +A+ +
Sbjct: 58 ESSPEFLRASQQYGSLEFLKTKQDPLVVAVCDITDLPGSLGHLPQLLAQNLG-------- 109
Query: 231 AWKEGKSGNVPRVVLVVTKIDLLPSS--LSPTRFEHWVRQRAREDGI--SKITKLHFVSA 286
RV L K DLLP S R W+ Q + G+ ++ + +SA
Sbjct: 110 ----------ARVHLAANKFDLLPKSSRRHEQRIRDWIVQHVKNLGLPTKQVASVTLISA 159
Query: 287 VKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDG----EEKN 342
K WG+ SL+ + +++ +G N GKS L+N + +G E+
Sbjct: 160 KKGWGVTSLMHRLDRERRPTDDIYLVGCTNVGKSALVNKFMTQIRGSLDEEGRRLKEQLK 219
Query: 343 IVSHLTEAPVPGTTLGIVRV 362
+T + +PGTT+G +++
Sbjct: 220 AKYMITSSAIPGTTMGTIKI 239
>gi|317029173|ref|XP_001391006.2| hypothetical protein ANI_1_524054 [Aspergillus niger CBS 513.88]
Length = 656
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 179/460 (38%), Gaps = 115/460 (25%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKV--RKSHLVHVANESEFSNSLKK-------- 132
CPGCG Q P PGY+ + + K+ V E LK
Sbjct: 76 CCPGCGAYAQTVEPSEPGYYGKTRKQTRKLLSETKQFVEGEENGEEGKGLKAEGEKAADR 135
Query: 133 -------------------GGLVVFEAENETSEVKKHEKPV-VCARCHALRHYGKVKDVT 172
G +V A+ ++K + PV +C RCH L H+ K
Sbjct: 136 IQKYLELTDVGGSVPRPKFGASLVKAADTAGKYLEKSKAPVPICDRCHDLLHHNKA---- 191
Query: 173 VENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKM--VSDTAEENER 230
V + P D ++ L + + + VVDAADF S + + + D +N R
Sbjct: 192 VPAISPTMD---SLRAYLDESPHNHNRIYHVVDAADFPMSVVKDIYTTLGIMDPRSKNRR 248
Query: 231 A----WKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE-HWVRQRARED-GIS----KITK 280
+ +K GK +P + V+ + DLL ++ + +VR R+ G+S ++
Sbjct: 249 SATYKYKSGK--KLPTISFVINRSDLLAATKEQVDSKMEYVRSVLRDTFGLSHEEFRLGN 306
Query: 281 LHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNA-----------IAKS 329
+H +SA + W K + +++ + G +W +G N GKS+ + A IA+
Sbjct: 307 VHMISAQRGWWTKKVKEEIREHGG---GIWVVGKANVGKSSFIEACFPKDSRNLEKIAEL 363
Query: 330 VDAGRGGDGEEKNIVSH-----------LTEAP-------------VPGTTLGIVRVEGV 365
++ EE + +H L AP +PGTT+ +R+
Sbjct: 364 IELRE----EESRMATHFDSSAIDSEGLLPPAPREDLYPILPVVSSLPGTTVSPIRIP-F 418
Query: 366 LPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHS-------IHIA 418
+ ++ D PGL ++ + E ++ + + K KP IK G S + I
Sbjct: 419 GRGRGEMIDLPGLDR-GELADHVRDEFKRDLIMTKRKKPERLSIKPGQSLLLGGGLVRIT 477
Query: 419 GLMRMDVEESSVESIYVTVWASPYLPL--HMGKTENACTM 456
+ DV V A+ ++PL H+ +TE A M
Sbjct: 478 PVNPEDV-----------VMAACFVPLETHLTRTEKAIEM 506
>gi|336271885|ref|XP_003350700.1| hypothetical protein SMAC_02372 [Sordaria macrospora k-hell]
gi|380094862|emb|CCC07364.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 774
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 113/511 (22%), Positives = 195/511 (38%), Gaps = 105/511 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYF-------------IRPSQNLNKVRKSHLVHVANESEFSNSL 130
C GCG L Q T P+ GYF I P + ++ A ++ L
Sbjct: 95 CTGCGALSQTTIPEQAGYFDVSRKAVKEYLGVIEPEKRKVIRSADQVIEDALKNINMEEL 154
Query: 131 KKGGLVV-------FEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFD 183
++ G+ + ++A ++ E + P +C RCH L H+ K + P D
Sbjct: 155 ERMGVDLKSLLPKDYQANKKSPESEGPPHPPLCDRCHELVHHRKGNSI----FHPGVD-- 208
Query: 184 HTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTA--EENERA----WKEGKS 237
++ + + + V VVDAADF S K+ ++V +N RA W G+
Sbjct: 209 -SLRETIEESPYKYNHVYHVVDAADFPMSLISKLERLVGTLPIRSKNRRAKSETWHAGRQ 267
Query: 238 GNVPRVVLVVTKIDLLP------SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWG 291
N + ++T+ DLL L P E + R ++ + VSA +NW
Sbjct: 268 IN---LSFIITRSDLLAPKKEQVDRLKPYLVETLRKALGRIGNRVRLGNVMCVSARRNWW 324
Query: 292 LKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAI---------------------AKSV 330
K L +++ + G W +G N GKS L + I +V
Sbjct: 325 TKELKEEIFEHGGAN---WMVGRVNVGKSRLFHDIFPQGRMNWQDNQKLPVLPAFRNNNV 381
Query: 331 DAGRGGDGE---------EKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
G+ +G+ E N + + +PGTT VRV + +L D PGL
Sbjct: 382 TYGKLDEGDDALLPPAQPEMNYPAMPIVSDLPGTTASPVRVP-FGNKKGELIDLPGLSR- 439
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+ + E++ + + + P +K G S+ + G +R+ + ++ +T A
Sbjct: 440 GDLELYVKPEKRADLVMKMRVVPEQAVLKPGQSLLVGGFIRI-----TPKTPDLTFLAYS 494
Query: 442 YLPL--HMGKTENACTMVEKHFG----RQLQPPIGEKRVEELGKWVRKE----------- 484
+ P+ H+ T+ A + E G + P ++++ G + K
Sbjct: 495 FTPIEAHVTGTDKAILVQEMKEGAPHVENIALPETAEKIKHAGSFALKYDVTRQRSGPLT 554
Query: 485 ------FHVSGSSWDSSSVDIAAAGLGWFSV 509
F V + S+DI G+GW V
Sbjct: 555 RKNACGFKVDVLPFRVLSIDILIEGVGWVEV 585
>gi|383849691|ref|XP_003700478.1| PREDICTED: nitric oxide-associated protein 1-like [Megachile
rotundata]
Length = 739
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 144/357 (40%), Gaps = 98/357 (27%)
Query: 72 GNYDEATPKLTV-CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSL 130
G D A+P +V C GCG L+ + K PGY PS+ FSN
Sbjct: 219 GTPDPASPVSSVPCGGCGALLHCKDAKIPGYL--PSE-----------------LFSN-- 257
Query: 131 KKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKL 190
+AE + K +C RCH L+ Y V V + D+ + L
Sbjct: 258 --------QAEEDL-------KLTICQRCHFLKFYKAALKVNVS--IEDY------PKLL 294
Query: 191 MSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPR--VVLVVT 248
+ +++VVD DF S W + KS P + LV
Sbjct: 295 KVIKRKKCAIILVVDLTDFPCSI------------------WPDLKSIMHPFTPIFLVGN 336
Query: 249 KIDLLPSSLSPTRFEHWVRQRARED-----GISKITKLH--FVSAVKNWGLKSLIDDVVD 301
K+D LP S F ++Q + GISK +H +SA+ +G++ LI+ +
Sbjct: 337 KVDALPRDRSTEVFLTRIKQLLADTVVDITGISKKNIMHVEIISALTKFGIEQLINKLQY 396
Query: 302 LAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVR 361
RG+V+ +G N GKSTL N + S D + + +++ T +P PGTTL +++
Sbjct: 397 KWSVRGDVYLVGCTNVGKSTLFNVLLNS-DYCK---VQAIDLIPRSTVSPWPGTTLNLLK 452
Query: 362 VEGVLPAQAKLFDTPGLLHPNQ-----ITTRLTREE---QKLVNINKELKPRTYRIK 410
LL+ N T RL RE+ Q+L+ E RT +IK
Sbjct: 453 FP--------------LLNMNSERCELRTRRLMREQPLKQELMKYRNEEFKRTRKIK 495
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 6/173 (3%)
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES 432
+DTPG + +QI LT +E L + PRT+ K H++ +AGL R+D +
Sbjct: 548 YDTPGTVQTDQILDLLTTDELMLTLPKVTVLPRTFDFKPQHTVFVAGLGRLDYVDGR-RL 606
Query: 433 IYVTVWASPYLPLHMGKTENACTMVEKHFGRQ--LQPPIGEKRVEELGKWVRKEFHVSGS 490
I T++ S LP+ + T+ A + ++ + + P +R+ K KE+ V+G
Sbjct: 607 IRCTLFTSNELPITICYTDVADEVYDQLLETEAFVVPSNEPERLRVWPKLESKEYEVTG- 665
Query: 491 SWDSSSVDIAAAGLGWFSVR-LKGE-AALGVWTYEGVDIVLRNALLPYRSQVF 541
+ S+ DI + GW ++ K E L WT +G I LR L +S F
Sbjct: 666 IYKESAADIVLSNAGWIAITPAKNEKVVLRAWTPQGRGIHLRRPALLSKSVHF 718
>gi|432961268|ref|XP_004086582.1| PREDICTED: nitric oxide-associated protein 1-like [Oryzias latipes]
Length = 645
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 77/140 (55%), Gaps = 3/140 (2%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
L+DTPG++ + I L +E +LV + + PRT+ ++ G S+ + L R+D + +
Sbjct: 435 LYDTPGIIKEHDILQLLQEKEVQLVVPTRAVVPRTFVLQPGMSLFVGALFRIDFLQGE-K 493
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELGKWVRKEFHVSG 489
S + ++ AS +P+H+ + A ++ EKH G L P G +R++ V ++F V G
Sbjct: 494 SCWFSIMASNLVPVHVTSLDKADSIYEKHAGHVLLGVPTGGSERMKAFPALVHQDFSVEG 553
Query: 490 SSWDSSSVDIAAAGLGWFSV 509
+ ++VD+ + GW +V
Sbjct: 554 GGYLEAAVDVKLSSAGWVAV 573
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 133/328 (40%), Gaps = 82/328 (25%)
Query: 82 TVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAE 141
T C GCG LM T PGY PS+ ++ L G L
Sbjct: 114 TCCSGCGALMHCTAADVPGYL--PSE-----------------KYKALLMDGQL------ 148
Query: 142 NETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVL 201
+C RCH L H+ K ++ + + V +++ +++
Sbjct: 149 ----------GGAICQRCHLLTHHHKALNLQLTR-----EQYREVVQQIRPHRALVLLIV 193
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTR 261
++D D +V D G G +V++ KIDLLP SP
Sbjct: 194 DLLDLPD----------SIVPDLP---------GLVGANKHIVVLGNKIDLLPGD-SPNY 233
Query: 262 FEHWVRQ---RAREDGI-SKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNA 317
+ RQ ++ G S++T +H +SA +G+++LI + +G+V+ +G+ NA
Sbjct: 234 LQRLKRQLSGYCQQAGFGSQVTDIHLISAKTGYGVEALISSLQRSWKYKGDVYLVGSANA 293
Query: 318 GKSTLLNAIAKS-VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTP 376
GKSTL N + +S R D ++ T +P PGTTL +++ + P ++F
Sbjct: 294 GKSTLFNTLLESDYCKSRASD-----VIHKATISPWPGTTLNLLKFPIINPTPYRMF--- 345
Query: 377 GLLHPNQITTRLTREEQKLVNINKELKP 404
+ RL EQ++ N EL P
Sbjct: 346 ------RRQKRLKEAEQQMEN---ELTP 364
>gi|449270675|gb|EMC81332.1| hypothetical protein A306_10846, partial [Columba livia]
Length = 390
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 88/180 (48%), Gaps = 13/180 (7%)
Query: 373 FDTPGLLHPN-------QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDV 425
FDTPG++ N Q+ LT EE KLV + PRT+ +K G + +A L R+D
Sbjct: 183 FDTPGIIKENCVEQFILQVLNLLTDEEVKLVLPTSAIVPRTFILKPGMVLFLAALGRVDY 242
Query: 426 EESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELGKWVRK 483
+ + + TV AS LP+H+ NA E+ G++L P GE+R++E V +
Sbjct: 243 LQGE-KPAWFTVVASNLLPVHISTLSNADAFYEERAGQELLKVPMGGEERMKEFPPLVPQ 301
Query: 484 EFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVD--IVLRN-ALLPYRSQV 540
+ + G + DI + GW +V E L + Y D +VLR LLPY S +
Sbjct: 302 DITLKGIGPTEAVADIKLSSAGWVAVTAHEEEKLLLRAYTPKDTRLVLREPPLLPYISTI 361
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + VSA +G++ LI + G+V+ +GA N+GKSTL NA+ +S R
Sbjct: 1 VVDVRLVSAKTGFGMEGLISRLQRSWKCAGDVYLLGATNSGKSTLFNALLRSDYCKSRAT 60
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLF 373
D V+ T +P PGTTL +++ + P ++F
Sbjct: 61 DA-----VNRATVSPWPGTTLNLLKFPIINPTCDRIF 92
>gi|205374257|ref|ZP_03227056.1| GTP-binding protein YqeH [Bacillus coahuilensis m4-4]
Length = 164
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 91/160 (56%), Gaps = 16/160 (10%)
Query: 243 VVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWG-LKSLIDDVVD 301
V+L+ K+DLLP S+ P++ HW+++ A+E G+ K + +SA K LK+L ++++
Sbjct: 20 VLLIGNKVDLLPKSVKPSKLVHWMKKEAKELGL-KPVDVQLISADKGTNILKAL--ELIE 76
Query: 302 LAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVR 361
K +V+ +G N GKST +N I + V EKN++ T + PGTTL ++
Sbjct: 77 TYRKGQDVYIVGCTNVGKSTFINRIIQEVSG-------EKNVI---TTSHFPGTTLDMIE 126
Query: 362 VEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKE 401
+ L L DTPG+++ +Q+ + ++ K +++ K+
Sbjct: 127 IP--LDDGQALIDTPGIINHHQMAHYVDKKSLKPLHLKKK 164
>gi|330931761|ref|XP_003303526.1| hypothetical protein PTT_15768 [Pyrenophora teres f. teres 0-1]
gi|311320419|gb|EFQ88372.1| hypothetical protein PTT_15768 [Pyrenophora teres f. teres 0-1]
Length = 753
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 133/321 (41%), Gaps = 59/321 (18%)
Query: 45 SSSSSFSSQPTNTAPPPLSSSLALTRDGNYDEATPKLTVCPGCGVLMQDTNPKHPGYFIR 104
+S++ P+N PP S SL + P+ CPGCG L Q + K GY+
Sbjct: 60 ASTTQLPEIPSNNTSPPTSQSLT--------RSLPR--ACPGCGALTQMYDKKEAGYY-- 107
Query: 105 PSQNLNKVRKSHLVH---------VANESEFSNSLKK------GGLVVFEAENETSEVKK 149
N+++ +H A + F+ +LK G L V +E +
Sbjct: 108 ---NIDRNAIREYLHWTPNTAKQTTAEDEIFAKALKDASPELLGELGVANHGDEALPDDE 164
Query: 150 HEKPVVCARCHALRHY---GKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDA 206
+ VC RCH L H+ + TVE ++ + + + R+ + VVDA
Sbjct: 165 APETPVCDRCHQLIHHRVGSPIHHPTVE----------SIQQTIAESPHRRNHIYHVVDA 214
Query: 207 ADFDGSF-PRKVAKM-VSDTAEENERAWKEGKSGN--VPRVVLVVTKIDLL-PSSLSPTR 261
ADF S P + + + +N RA +G N + V ++T+ DLL P
Sbjct: 215 ADFPLSIVPNLQSSLRIPKLRTQNRRAKHKGWVANDRIAEVSFIITRADLLAPKKEQVDV 274
Query: 262 FEHWVRQ-----RAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQN 316
+VR R++ +++ + VSA + W K + +D+ + + G W +G N
Sbjct: 275 LMPYVRDVLRDALGRQNVNARLGNVRLVSAKRGWWTKEVKEDIWE---RGGAGWMVGKVN 331
Query: 317 AGKSTLLNAIAKSVDAGRGGD 337
GKS L A+ GRG D
Sbjct: 332 VGKSNLFEAV---FPKGRGAD 349
>gi|156096526|ref|XP_001614297.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803171|gb|EDL44570.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1800
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 112/236 (47%), Gaps = 17/236 (7%)
Query: 308 NVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLP 367
N++ +G N+GKS+L+N + K+V ++ N ++ + +PGTTL ++++ L
Sbjct: 1561 NIYIVGNANSGKSSLINYLLKNVK-------KKDNRNFQISNSIIPGTTLKNIQIK--LS 1611
Query: 368 AQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELK--PRTYRIKAGHSIHIAGLMRMDV 425
+ DTPG++ + + L +E K V K K P Y + I I GLM + +
Sbjct: 1612 KHITINDTPGIISGQSLLSCLNFDEMKYVVCTKLKKKVPAIY-VNKNDYIFIGGLMYIHI 1670
Query: 426 EESSVESIYVTVWASPYLPLHMGK--TENACTMV-EKHFGRQLQPPIGEKRVEELGKWVR 482
++ + S +P+ K +++A + EK L PP +R ++LG +
Sbjct: 1671 LNIKKHYAIMSFFMSERIPIIKRKNFSKDAGNFLREKISSGFLYPPFSVERFDQLGTFKD 1730
Query: 483 KEFHVSG--SSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPY 536
F+++ DS S D+ GLG + + T + VD+V R +L+PY
Sbjct: 1731 CYFNITNPCVDRDSGSYDVHVQGLGCITFYAFESIEFHLHTLKNVDVVSRTSLMPY 1786
>gi|170033577|ref|XP_001844653.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874621|gb|EDS38004.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 687
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 132/308 (42%), Gaps = 71/308 (23%)
Query: 72 GNYDEATPKLTV-CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSL 130
G D + P +V C GCG MQ P PGY PSQ
Sbjct: 169 GTPDPSEPVSSVACGGCGAFMQCAEPSIPGYL--PSQ----------------------- 203
Query: 131 KKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKL 190
+F+ ++ KK + +C RCH L++Y +VTV P+ D+ +
Sbjct: 204 ------LFKGKH-----KKQLQSTICQRCHFLKNYNTAINVTVS---PE-DYVQMIS--- 245
Query: 191 MSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKI 250
S R++VL++VD FP + +SD G +++V K+
Sbjct: 246 -SIRDKRALVLLMVDLL----DFPCSIWPGLSDIL------------GPKRSIIVVGNKV 288
Query: 251 DLLPSSLSPTRFEHWVRQRAR---EDGISK--ITKLHFVSAVKNWGLKSLIDDVVDLAGK 305
DLLP SP + R G + I + VSA +G++ LI + ++ G
Sbjct: 289 DLLPRD-SPGYLDTIRDTLTRAIVSSGFERNNIRHVALVSAATGFGVEELITKLHNVWGS 347
Query: 306 RGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGV 365
RG+V+ +G N GKSTL NA+ S D + + ++V T P PGTTL +++ +
Sbjct: 348 RGDVYLVGCTNVGKSTLFNALLAS-DLCK---VQATDLVQRATACPWPGTTLRMLKFPIL 403
Query: 366 LPAQAKLF 373
P+ +LF
Sbjct: 404 RPSDYRLF 411
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 86/173 (49%), Gaps = 12/173 (6%)
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES 432
+DTPG++ P+QIT LT +E + ++PR Y +K G S+ +AGL R+D E S
Sbjct: 494 YDTPGVIQPDQITNLLTTDELLQTLPKQMIRPRAYLLKPGLSLFLAGLGRLDYLEGP-PS 552
Query: 433 IYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEKRVEELGKW----VRKEFHV 487
+ +++SP LP + +T A + G + LQ P + L +W + +
Sbjct: 553 TRILLYSSPSLPTLICETTAATQIYANLLGTEFLQIPGPDP--NRLSRWPALKPSPDILL 610
Query: 488 SGSSWDSSSV-DIAAAGLGWFSVRLK--GEAALGVWTYEGVDIVLRN-ALLPY 536
+G SV DI + GW +V L EAA WT E I +R ALLP+
Sbjct: 611 TGVQEKHISVADILLSSGGWIAVNLPPGEEAAFRAWTPEARGIYVRQPALLPH 663
>gi|255027220|ref|ZP_05299206.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J2-003]
Length = 161
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
L DTPG+++ +Q+ + K + KE+KP +++ ++ + L R+D +
Sbjct: 9 LVDTPGIINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRK 68
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSS 491
S+ V+ S LP+H K E A + E+ G LQPP E+ +E L K V F +
Sbjct: 69 SL--VVYVSNNLPIHRTKLEKADALYERQAGIVLQPPT-EEGMETLPKLVPYSFTI---- 121
Query: 492 WDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
DI +GLGW ++ +G A + W EGV +R +L+
Sbjct: 122 --KEKADIVFSGLGWVTIP-EGGAKVTAWVPEGVSATIRTSLV 161
>gi|392862835|gb|EAS36494.2| hypothetical protein CIMG_10799, partial [Coccidioides immitis RS]
Length = 617
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 129/520 (24%), Positives = 208/520 (40%), Gaps = 132/520 (25%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
CPGCG L Q + + GY+ R N VR ++ S ++ + + E+ +
Sbjct: 79 CPGCGALTQWVDKEQAGYYTR---TRNAVRS----YIQETSRDRDATRTENELCAESTDI 131
Query: 144 TSEVKKHEK-------------------PVV--CARCHALRHYGKVKDVTVENLLPDFDF 182
+++VK + P++ C RCH+L ++ + + L
Sbjct: 132 SAKVKSADTASGEELKLASGKEELELAAPILPLCDRCHSLVNHREAYPIPYPPL------ 185
Query: 183 DHTVGRKLMSASGAR-SVVLMVVDAADFDGSFPRKVAKMVSDTAEE--NERA----WKEG 235
+ R +M S + V ++DAADF S + + +S + N RA ++ G
Sbjct: 186 --SYIRDIMEESPWHINHVYHILDAADFPLSLVPDIYRDLSLQTQRSLNRRAKTVTFRHG 243
Query: 236 KSGNVPRVVLVVTKIDLLPSSLSPTRFEH------WVRQRARE-----DGISKITKLHFV 284
K V ++T+ DLL EH ++ Q R+ G ++ +H V
Sbjct: 244 KRQT--DVHFIITRADLLGGMK-----EHIDSLMTYMTQVLRDALGPSSGKVRLGNVHMV 296
Query: 285 SAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAI-AKSVDAGRGGDGEEKNI 343
SA + W K + + + + G VW +G N GKS L+ AI KS DA R EE +
Sbjct: 297 SAQRGWWTKEVKKKIWE---EGGGVWMVGKANVGKSNLIQAIFPKSPDAARKLRVEENS- 352
Query: 344 VSHLT---------------------EAPV-------PGTTLGIVRVEGVLP---AQAKL 372
SHLT + PV PGTT +R LP + +L
Sbjct: 353 -SHLTPEFGPLDIEESGLLPPVQKQYDFPVLPIVSSLPGTTASPIR----LPFGQKKGEL 407
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES 432
D PGL I + + V + K KP +K+ S+ + L+R + + +S
Sbjct: 408 IDLPGLFR-GGIDEYVQDGFKFDVIMTKRPKPERLTVKSRQSLLLEDLVR--ITPVNFQS 464
Query: 433 IYVTVWASPYLPL--HMGKTENACTMVEKHFGRQLQPPIGEKR----------------- 473
+ + ASP++PL H+ TE A T V + PPI +K
Sbjct: 465 VML---ASPFVPLTPHVTSTEKA-TEVLLGQRKPPHPPIAKKGTNKCIASAGVFELKYDV 520
Query: 474 VEELGKWVRKEFHVSGSS----WDSSSVDIAAAGLGWFSV 509
E+ GK V++ + G + + SVDI G GW +
Sbjct: 521 TEKYGKSVKQSKYQDGDNLTALYKIMSVDILIEGCGWVEL 560
>gi|296814722|ref|XP_002847698.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238840723|gb|EEQ30385.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 614
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 186/455 (40%), Gaps = 90/455 (19%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L Q PK PGY+ K K ++ V ++E + + LV E N+
Sbjct: 81 CHGCGALTQWVYPKEPGYYT----VTRKPVKQYIRQVIRDNESNET----ALVDSEVGNK 132
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLM 202
+ K +C RCH L ++G+ + L + R L+ S + V
Sbjct: 133 AAPESKEVGIPLCDRCHNLINHGEGDPIPYPTL--------SYIRDLIEESPFHNNYVYH 184
Query: 203 VVDAADFDGSFPRKVAKMVSDTAE--ENERAW--KEGKSGNVPRVVLVVTKIDLLPSSLS 258
VVDAADF S + + V + +N R+ K G S ++ + ++T+ DLL S++
Sbjct: 185 VVDAADFPLSVISNLDRHVPLQPQRSQNRRSHTKKHGSSRHLAELNFIITRADLL-SNVK 243
Query: 259 PT------RFEHWVRQRA--REDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVW 310
P +RQ +E GI ++ +H VS+ + W K + +D+ + + G VW
Sbjct: 244 PQADSLMKDMVEILRQNLDRKEHGI-RLGNVHMVSSYRGWWTKQIKEDIWN---RGGGVW 299
Query: 311 AIGAQNAGKSTLLNAI---------AKSVD-------AGRGGDGEE-----KNIVSHLTE 349
+G N GKS L+ ++ AK + GR GE + +
Sbjct: 300 MVGKVNVGKSKLITSVFPKSAPTYKAKKLQNARGVTVVGRSSAGEATAPQFEELEDDDAG 359
Query: 350 APV--------------------PGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLT 389
APV PGTT +R+ + ++ D PGL
Sbjct: 360 APVLLPPLQKEVPFPNLPIDSIRPGTTASPIRIP-FDKHRGEVIDLPGLFRSGLDEFVQD 418
Query: 390 REEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMD-VEESSVESIYVTVWASPYLPL--H 446
+ + LV ++ +P IK S+ + GL+ + +EE V V ASP++ L H
Sbjct: 419 KHKPDLVMTSRP-RPTQLSIKPTQSLLLGGLIGIKPLEEKEV------VLASPFVSLEAH 471
Query: 447 MGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWV 481
+ + A M +Q + P G E +G+ +
Sbjct: 472 VTHKDKAVEM----LAQQRECPNGNIAKEGIGEQI 502
>gi|224139212|ref|XP_002326796.1| predicted protein [Populus trichocarpa]
gi|222834118|gb|EEE72595.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 128/310 (41%), Gaps = 73/310 (23%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG + +P PG F+ P +
Sbjct: 109 CYGCGAPLHTLDPDAPG-FVDP-------------------------------------D 130
Query: 144 TSEVKKHEK---PVVCARCHALRHYGKVKDVTVENLL---PDFDFDHTVGRKLMSASGAR 197
T E+KK + V+C RC L H + V F + KL +
Sbjct: 131 TYELKKRHRQLRTVLCGRCRLLSHGHMITAVGGNGGYSGGKQFVSADELREKLSHLRHEK 190
Query: 198 SVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSL 257
++++ +VD DF+GSF ++ +V G P ++LVVTK+DLLP
Sbjct: 191 ALIVKLVDVVDFNGSFLARLRDLV----------------GANP-IILVVTKVDLLPRDT 233
Query: 258 SPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNA 317
WV + + +S + +H S+ G+ ++ + + K +V+ +G+ N
Sbjct: 234 DLNCVGDWVVEATTKKKLS-VLSVHLTSSKSLVGIAGVVSE-IQREKKGRDVYILGSANV 291
Query: 318 GKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFD 374
GKS ++A+ K++ D + K I ++ VPGTTLG ++++ L KL+D
Sbjct: 292 GKSAFISALLKTMALRDPAAAAARKYKPI-----QSAVPGTTLGPIQIDAFL-GGGKLYD 345
Query: 375 TPGL-LHPNQ 383
TPG+ LH Q
Sbjct: 346 TPGVHLHHRQ 355
>gi|345478814|ref|XP_001599126.2| PREDICTED: uncharacterized protein C4orf14 homolog [Nasonia
vitripennis]
Length = 761
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 35/216 (16%)
Query: 152 KPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSA--SGARSVVLMVVDAADF 209
+ V C RCH +++Y DV V PD KL+ R++V+++VD DF
Sbjct: 279 RSVTCQRCHFMKNYHTCLDVRVS---PD------EYPKLLEKINDNRRAIVILLVDLTDF 329
Query: 210 DGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP--SSLSPTRFEHWVR 267
S K+ +++ G V +V KIDLLP S+L + +
Sbjct: 330 PCSIWPKLPEVI----------------GTKRHVYVVGNKIDLLPKDSTLFLDHVKDSLT 373
Query: 268 QRAREDGISKITKLH--FVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNA 325
+ E G++K H +SA +G++ LI+ + + R +V+ +G NAGKSTL N
Sbjct: 374 ESLIEIGLTKTNIKHVGLISAKTGYGIEQLINKLYKVWQYRSDVYIVGCTNAGKSTLFNT 433
Query: 326 IAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVR 361
+ +S D + + +++ T +P PGTTL +++
Sbjct: 434 LLQS-DFCK---SQAVDLIQRATTSPWPGTTLNLLK 465
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES 432
+DTPG + P+QI LT +E ++ + PRT+ I+ G +I IAGL R+D+ ESS
Sbjct: 564 YDTPGTIQPDQILHFLTTDELMKTLPSRIISPRTFCIQPGLTIFIAGLGRLDILESS-NF 622
Query: 433 IYVTVWASPYLPLHMGKTENACTMVEK--HFGRQLQPPIGEKRVEELGKWVRKEFHVSGS 490
I TV+AS LP+ + + E++ + + H + P +R++ + K+F G
Sbjct: 623 IRCTVFASNKLPITICEVEDSELVYNELLHTEAFVVPMNNPERLKMWPELKSKDFETIGV 682
Query: 491 SWDSSSVDIAAAGLGWFSVRL--KGEAALGVWTYEGVDIVLRN-ALLP 535
S D+ + GW ++ + WT EG I LR ALLP
Sbjct: 683 GHKESVSDVVLSSAGWIAITADENQRVVMRGWTPEGRGIYLRTPALLP 730
>gi|224076032|ref|XP_002304881.1| predicted protein [Populus trichocarpa]
gi|222842313|gb|EEE79860.1| predicted protein [Populus trichocarpa]
Length = 115
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 41/51 (80%)
Query: 227 ENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISK 277
E+ AWKEGKSGNV R+VLVVT+IDLLPSSLSP FE WVR+ AR+ G K
Sbjct: 2 EHFTAWKEGKSGNVARIVLVVTRIDLLPSSLSPRGFEQWVRRGARQGGAIK 52
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 27/39 (69%)
Query: 517 LGVWTYEGVDIVLRNALLPYRSQVFEVAGFTVSKIISKA 555
LG G LR+ALLP R+QVFEV GFTVSK +SKA
Sbjct: 71 LGCSDIRGSWCCLRDALLPNRAQVFEVTGFTVSKTVSKA 109
>gi|348571722|ref|XP_003471644.1| PREDICTED: uncharacterized protein C4orf14-like [Cavia porcellus]
Length = 685
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 9/187 (4%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG++ N I LT +E V + PRT+ +K G + + + R+D + + +
Sbjct: 485 FYDTPGIMKENCILNLLTDKEVNNVLPTYSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 543
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPI-GEKRVEELGKWVRKEFHVSG 489
S + TV AS +LP+H+ + A + +KH G LQ P+ GE+R+ E V ++ +
Sbjct: 544 SAWFTVVASNFLPVHITSLDKADAVYQKHAGHALLQVPMGGEERMAEFPPLVAEDITLKE 603
Query: 490 SSWDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGF 546
S +V DI + GW +V L+ L +T EG + +R LLPY + + G
Sbjct: 604 GLGQSEAVADIKFSSAGWVAVTPHLQDRLHLRGYTPEGTVLTVRPPLLPY---IVNIKGQ 660
Query: 547 TVSKIIS 553
+ K ++
Sbjct: 661 RIRKSVA 667
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 270 AREDGISK------ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
A EDG S + + +SA +G++ LI + RG+V+ +GA N GKSTL
Sbjct: 289 AEEDGNSLARSRTVVRDVRLISAKTGYGIEELISALQRAWRYRGDVYLVGATNTGKSTLF 348
Query: 324 NAIAKS-VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN 382
N + +S +G + ++ +S P PGTTL +++ P ++F+ L +
Sbjct: 349 NTLLQSDYCTAKGAEAIDRATIS-----PWPGTTLNLLKFPICNPTPYRMFERQKRLKND 403
Query: 383 QITTR--LTREEQKLVNINK 400
+ L +EQ +N+ K
Sbjct: 404 SSKSEEDLNEQEQNQLNVLK 423
>gi|157872261|ref|XP_001684679.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68127749|emb|CAJ06052.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 918
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 148/668 (22%), Positives = 243/668 (36%), Gaps = 164/668 (24%)
Query: 64 SSLALTRDGNYDEATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKV----RKSHLVH 119
+S+ + ++ P CPGCG L+Q+ + GY +RP + V K+ L H
Sbjct: 261 ASIVMEAPSSFHIPVPGRDCCPGCGALLQNLSDDAFGY-VRPGEIEKYVAQRNAKAQLRH 319
Query: 120 --VANESEFSNSLKKGGLVVFE-------AENETSEVKKHEKPVVCARCHALRHYGKVKD 170
A +E K G V E E + + +P C RCHAL + G
Sbjct: 320 EYAARMAELQAHWAKHGRHVGEEWLDFMTQEEFDAFYRDTPRPFTCHRCHALENLGVEGR 379
Query: 171 VTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENER 230
V + PDF +L + + VV++VVD DF GS + ++
Sbjct: 380 RKVWS-APDFT------DQLRALKEKKCVVVLVVDITDFPGSMVYNLPGLI--------- 423
Query: 231 AWKEGKSGNVPRVVLVVTKIDLLPSS---------------LSPTRFEHWVRQRAREDGI 275
S N P V++ V K+D + + +S + WV A + G+
Sbjct: 424 ------SMNNP-VIIAVNKMDCIRNRSFNYAGKDRSVAACLVSESYVRRWVMDIAVQFGL 476
Query: 276 S--KITKLHFVSAVKNWGLKSL---IDDVVDLAGKRGN----VWAIGAQNAGKSTLLNAI 326
+I K+ +SA + WG+ L I+D +L +R + + +G N GKS+++NA+
Sbjct: 477 PQHQIKKVVPLSAKRGWGITHLISAIEDAANLNLRRPHKPLPTYFVGVANVGKSSVINAM 536
Query: 327 AKSVDAGRGGDGEEKNIVSHLTEA------------------------------------ 350
A ++ + E + + T+A
Sbjct: 537 AHALYVPQPPHPESRKVYYTKTDAQGKKAVFWRWYTPPNVNQAEMLDIRGRHDKKASKLM 596
Query: 351 ---PVPGTTLGI--VRV--------------------------EGVLPAQAKLFDTPGLL 379
+PGTT+ + VR+ + V Q ++DTPGLL
Sbjct: 597 TVSSLPGTTVAVNAVRISLGSTAHTAKQEQQRLSEGAAAPGKADDVAGIQTYIYDTPGLL 656
Query: 380 HPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWA 439
+ LT + + I K P+ + + GH++ + GL +DV + V+
Sbjct: 657 PHWHQRSPLTLLQMRRTLIRKFRNPQCFLLLPGHTLLLGGLAAVDVVRGPPRGLLFLVYT 716
Query: 440 SPYLPLHMGKTENACTMVEKHFGRQLQPP---------------IGEKRVEELGKWVRKE 484
S + + T + + G+ L PP G R+ E ++
Sbjct: 717 SQKVRNAIVNTVQSDAFWREQLGKALDPPGSYEQLLPLDDLSTAAGPPRLSETRSYL--- 773
Query: 485 FHVSGSSWDSSSVDIAAAGLGW--FSVRLKGEAALGVWTYEGV-----------DIVLRN 531
F G D+ GLGW F V + L V T GV D+ R
Sbjct: 774 FECYGRHRRRPKADLYVCGLGWTSFCVSEPADVVLRVRTLPGVVHGVREPLRFKDLCARR 833
Query: 532 ALLPYRSQVFEVAGFTVSKIISKAD-QSLNKSKRLNEAKRKPREPEGTIHP-KSSLSTID 589
A P + F G + + S D S+N RL A P P ++S+ T++
Sbjct: 834 A-WPKLKRRFTAKG--IEDMESDVDSDSINTVVRLISAPVTPASAASADEPAEASVRTVE 890
Query: 590 SVSSSCQH 597
V+ H
Sbjct: 891 RVAHPRHH 898
>gi|380790571|gb|AFE67161.1| nitric oxide-associated protein 1 [Macaca mulatta]
Length = 698
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 9/187 (4%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ N I LT +E +V + + PRT+ +K G + + + R+D + + +
Sbjct: 494 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 552
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEK-RVEELGKWVRKEFHVSG 489
S + TV AS LP+H+ + A T+ +KH G LQ P+G K R+ V ++ +
Sbjct: 553 SAWFTVVASNTLPVHITSLDRADTLYQKHAGHTLLQVPMGGKERMAGFPPLVAEDIMLKE 612
Query: 490 SSWDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGF 546
S +V DI + GW SV +K L +T EG + +R LLPY + + G
Sbjct: 613 GRGGSEAVADIKFSSAGWVSVTPNVKDRLHLRGYTPEGTVLTVRPPLLPY---IVNIKGE 669
Query: 547 TVSKIIS 553
+ K ++
Sbjct: 670 RIKKSVA 676
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA +G++ LI + RG+V+ +GA NAGKSTL N + +S +G
Sbjct: 310 VRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCTAKGS 369
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN--QITTRLTREEQK 394
+ ++ +S P PGTTL +++ P + F L + Q L+ +EQ
Sbjct: 370 EAIDRATIS-----PWPGTTLNLLKFPICNPTPYRRFKRHQRLKKDSTQAEEDLSEQEQN 424
Query: 395 LVNINKE 401
+N+ K+
Sbjct: 425 QLNVLKK 431
>gi|301616297|ref|XP_002937599.1| PREDICTED: uncharacterized protein C4orf14-like [Xenopus (Silurana)
tropicalis]
Length = 710
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 134/347 (38%), Gaps = 77/347 (22%)
Query: 74 YDEATPKLTV----CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNS 129
Y P L V C GCG ++ P PGY PS+ K
Sbjct: 158 YGNPDPNLPVSGEQCTGCGAVLHSLEPSLPGYL--PSEKYASFLKC-------------- 201
Query: 130 LKKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRK 189
K ++C RC L ++ K V V
Sbjct: 202 -------------------KDSNELMCQRCCLLIYHQKALHVKVSQ--------EEYRSI 234
Query: 190 LMSASGARSVVLMVVDAADF-DGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVT 248
+ S + +VL +VD D D FP + D EN+ ++++
Sbjct: 235 VKSIQTKKGLVLFMVDMLDIPDSIFPDLI-----DIVGENKS------------ILVLGN 277
Query: 249 KIDLLPSSLSPTRFEHWVRQ------RAREDGISKITKLHFVSAVKNWGLKSLIDDVVDL 302
K+DLLP SP ++ Q +A + + IT +H +SA +G++ LI +
Sbjct: 278 KVDLLPGD-SPGYLKYLKGQLHDYCTKAGLNWMGNITDVHLLSAKTGYGVEELISKLQQS 336
Query: 303 AGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRV 362
+G+V+ +GA NAGKSTL N + +S D + E I+ T +P PGTTL +++
Sbjct: 337 WKYKGDVYLVGATNAGKSTLFNTLLQS-DYCKEKASE---IIKEATISPWPGTTLDLLKF 392
Query: 363 EGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRI 409
V P ++F L + T E +L + K LK +Y +
Sbjct: 393 PIVNPKPYRMFQRQKRLKEDFSKTEEDLSETELKQL-KTLKKHSYVV 438
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 3/142 (2%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG++ + L +E K K + PRT+ + G ++ +A L R+D +
Sbjct: 497 FYDTPGIVKEGCVLNLLKDKEVKAALPTKAIIPRTFILSPGMTLFLAALGRIDFLQGE-R 555
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELGKWVRKEFHVSG 489
+ +V AS LP+H+ + A + KH G L P GE+R++E + ++ + G
Sbjct: 556 PAWFSVIASNLLPVHITSLDKADDIYTKHAGGTLLGVPIGGEERMKEFPPLLPQDIKLKG 615
Query: 490 SSWDSSSVDIAAAGLGWFSVRL 511
+ DI + G +++
Sbjct: 616 IGASRAVADIKLSTAGLLRLKM 637
>gi|402869723|ref|XP_003898897.1| PREDICTED: nitric oxide-associated protein 1 [Papio anubis]
Length = 698
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 87/170 (51%), Gaps = 6/170 (3%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ N I LT +E +V + + PRT+ +K G + + + R+D + + +
Sbjct: 494 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 552
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEK-RVEELGKWVRKEFHVSG 489
S + TV AS LP+H+ + A T+ +KH G LQ P+G K R+ V ++ +
Sbjct: 553 SAWFTVVASNTLPVHITSLDRADTLYQKHAGHTLLQVPMGGKERMAGFPPLVAEDIMLKE 612
Query: 490 SSWDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPY 536
S +V DI + GW SV +K L +T EG + +R LLPY
Sbjct: 613 GRGGSEAVADIKFSSAGWVSVTPNVKDRLHLRGYTPEGTVLTVRPPLLPY 662
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA +G++ LI + RG+V+ +GA NAGKSTL N + +S +G
Sbjct: 310 VRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCTAKGS 369
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN--QITTRLTREEQK 394
+ ++ +S P PGTTL +++ P ++F L + Q L+ +EQ
Sbjct: 370 EAIDRATIS-----PWPGTTLNLLKFPICNPTPYRMFKRHQRLKKDSTQAEEDLSEQEQN 424
Query: 395 LVNINKE 401
+ + K+
Sbjct: 425 QLTVLKK 431
>gi|323342059|ref|ZP_08082292.1| GTP-binding protein [Erysipelothrix rhusiopathiae ATCC 19414]
gi|336066172|ref|YP_004561030.1| GTP-binding protein YqeH [Erysipelothrix rhusiopathiae str.
Fujisawa]
gi|322464484|gb|EFY09677.1| GTP-binding protein [Erysipelothrix rhusiopathiae ATCC 19414]
gi|334296118|dbj|BAK31989.1| GTP-binding protein YqeH [Erysipelothrix rhusiopathiae str.
Fujisawa]
Length = 340
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 112/259 (43%), Gaps = 37/259 (14%)
Query: 243 VVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDL 302
VVLVV K DLLP S+S + + + + +++ +S + + FVSA+K L+SL + D
Sbjct: 93 VVLVVNKRDLLPKSVSNNKLTNAIMRSLKDEDVS-LMDIVFVSALKKNTLESLNPYLED- 150
Query: 303 AGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRV 362
+G NAGKS+LLNA+ D L+ +PV TT ++ +
Sbjct: 151 ----APCAFVGCVNAGKSSLLNALMGKND---------------LSVSPVASTTADVLHI 191
Query: 363 EGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMR 422
E ++DTPGL + + T+ T E ++ K LKP Y++ +I I L
Sbjct: 192 E---TENYDVYDTPGLSNETNLLTKFTDENLVMLAPQKTLKPAVYQLYEKQTIMIGNLGA 248
Query: 423 MDVEESSVESIYVTVWASPYLPLHMG--KTENACTMVEKHFGRQLQPPIGEKRVEELGKW 480
+ V S V YLP + K E E +Q P K+ KW
Sbjct: 249 ITVSPKS------QVHVVSYLPFELKRIKPERLEANFELEHDFMIQNPSYRKK-----KW 297
Query: 481 VRKEFHVSGSSWDSSSVDI 499
+ H+ +D + I
Sbjct: 298 PVTDKHIDIEIFDVGFISI 316
>gi|378726889|gb|EHY53348.1| hypothetical protein HMPREF1120_01542 [Exophiala dermatitidis
NIH/UT8656]
Length = 693
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 113/514 (21%), Positives = 192/514 (37%), Gaps = 121/514 (23%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
CPGCG L QD P GY+ R + K K+ + + + + +S ++G V+E E
Sbjct: 92 CPGCGALTQDVAPGEAGYYTRTRNTVKKYLKA-VENASRRASREDSPEEG--YVWENEQS 148
Query: 144 TSEVKKHEK-----------PVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMS 192
+ +H + P VC RCH L H + + ++ + +
Sbjct: 149 ADKDGEHTQLDLSEPEASISPPVCDRCHHLIHDSRGVPIAHPSI-------EDIADSIAE 201
Query: 193 ASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDL 252
+ +++ V V+DAADF S + K +S ++ + + P + ++T+ DL
Sbjct: 202 SPFSKNHVYHVLDAADFPMSLIPSIYKSLSLAKPRSQNRRSQHSFSSKPSLSFIITRSDL 261
Query: 253 LPSS------LSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKR 306
L + + P R++ ++ +H VS+ + W K + D + G
Sbjct: 262 LAPNKEMVDKMMPKLLALLRSSLGRKNQKMRLGNVHLVSSKRGWWTKDIKDSIWQRGG-- 319
Query: 307 GNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLT--------EAP------- 351
GN W +G N GKS+L + G GE + + L E+P
Sbjct: 320 GN-WLVGKFNVGKSSLFEVLFPK------GSGERAPVYAELLQQQQEEQIESPALSKTSD 372
Query: 352 -------------------------VPGTTLGIVRVEGVLP---AQAKLFDTPGLLHPNQ 383
+PGTT +R LP + +L D PGL
Sbjct: 373 FLRENSLLPPPRPEVPFPAMPLVSSLPGTTASPIR----LPFGNNRGELIDLPGLERGG- 427
Query: 384 ITTRLTREEQKLVNINKELKPRT--YRIKAGHS-------IHIAGLMRMDVEESSVESIY 434
R RE +L ++ E +P + IK G S + I ++ +E+ +I
Sbjct: 428 -LDRFVREHDRL-DLVMEHRPTVTQHNIKPGQSLLLGGGLVRITPIL----DENDPSTIM 481
Query: 435 VTVWASPYLPL--HMGKTENACTMVEKHFGRQLQPPIGEKRVEEL--------------- 477
+ A P++PL H+ TE A + E+ L + E E +
Sbjct: 482 M---AYPFVPLKAHVTSTEKAISAQEQQHETSLASILSEGAGESMASAGKFYLKTDVTKS 538
Query: 478 --GKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
G VR S + + DI G+GW +
Sbjct: 539 RAGSVVRAGVAASKLPFHVYATDILIEGVGWVEL 572
>gi|332024512|gb|EGI64710.1| Uncharacterized protein C4orf14-like protein [Acromyrmex
echinatior]
Length = 532
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 123/313 (39%), Gaps = 78/313 (24%)
Query: 72 GNYDEATPKLTV----CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFS 127
GNY P ++ C GCG L+ +P PGY PS+ K L
Sbjct: 18 GNYGTPDPNSSISSIPCGGCGALLHCKDPALPGYL--PSELFLKRSNREL---------- 65
Query: 128 NSLKKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVG 187
+ ++C RCH + +Y +V V
Sbjct: 66 ------------------------RVMICQRCHFMHYYNTTLEVKVSA--------DEYP 93
Query: 188 RKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPR--VVL 245
+ L + V+++VD DF S W E S P V +
Sbjct: 94 KLLKVIRTKKCAVILMVDLTDFPCSI------------------WPEINSVLHPLTPVFV 135
Query: 246 VVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITK-----LHFVSAVKNWGLKSLIDDVV 300
V K+DLLP S F H + +KI K + +SA +G++ LI+ +
Sbjct: 136 VGNKVDLLPQD-SKYFFTHIKDCLLKAMESTKIKKENIRHIELISAKTGYGIEELINKLH 194
Query: 301 DLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIV 360
++ +G+V+ IG N GKS+L NA+ +S D + + +++ T +P PGTTL ++
Sbjct: 195 NIWKYKGDVYIIGCTNVGKSSLFNALLQS-DYCK---VQAVDLIQRATISPWPGTTLNLL 250
Query: 361 RVEGVLPAQAKLF 373
+ + P + +L+
Sbjct: 251 KFPILNPKRKRLY 263
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES 432
+DTPG + P QI LT +E V K + PRT+ + +I + G+ R+D E +
Sbjct: 341 YDTPGTIQPAQILDLLTTQELLSVLPKKIISPRTFILHVNQTIFLGGIGRLDYVEGNT-F 399
Query: 433 IYVTVWASPYLPLHMGKTENACTMVEKHFGRQ--LQPPIGEKRVEELGKWVRKEFHVSGS 490
I T+++S LP+ + TE+A + ++ + + P R++ V KE ++G
Sbjct: 400 IRCTIFSSNELPITLTHTEDADNVYDELLKTEAFVVPENNPDRLKHWPPLVSKEMEITGV 459
Query: 491 SWDSSSVDIAAAGLGWFSVRLKGE--AALGVWTYEGVDIVLRNALLPYRS 538
+ S DI + GW ++ + + L W +G + LR L +S
Sbjct: 460 GQNESISDIVLSSAGWIAIAAEKDERVLLKAWNPQGRGLHLRTPALLKKS 509
>gi|345312871|ref|XP_003429311.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein C4orf14
homolog [Ornithorhynchus anatinus]
Length = 711
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 77/143 (53%), Gaps = 3/143 (2%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG++ N + LT +E KLV + PRTY +K G + + L R+D + S +
Sbjct: 496 FYDTPGIMKENCVLNLLTDKEVKLVLPTHSIIPRTYMLKPGMVLFLGALGRIDYLQGS-K 554
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPI-GEKRVEELGKWVRKEFHVSG 489
S + +V AS LP+H+ E A + +KH G+ LQ P+ G +R+ E + ++ + G
Sbjct: 555 SAWFSVMASNLLPVHITTVEKADAIYQKHAGQALLQVPMGGTERMSEFPPLIPQDLTLEG 614
Query: 490 SSWDSSSVDIAAAGLGWFSVRLK 512
+ + DI + GW ++ ++
Sbjct: 615 NVLQEAVADIKLSSAGWVAITVQ 637
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 144/363 (39%), Gaps = 81/363 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q +P PGY P+ + E+E G EAE+
Sbjct: 138 CXGCGAELQCGDPGGPGYL--PAAKYEGL----------EAE------DGPGPGLEAEDG 179
Query: 144 TSEVKKHEKP-----VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR- 197
+VC RC L H+ + V L P R+L+S + R
Sbjct: 180 PGPGPGPGPGPGPGRLVCRRCWLLVHHRRALRV---RLPPGHH------RQLLSDALRRP 230
Query: 198 --SVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVV-TKIDLLP 254
+++L V D D +F + K++ PR +LV+ K+DLLP
Sbjct: 231 GPALLLYVADLLDLPDAFLPGLPKLLG------------------PRRLLVLGNKVDLLP 272
Query: 255 --SSLSPTRFEHWVRQRAREDGIS-------------KITKLHFVSAVKNWGLKSLIDDV 299
S+ R + G+ K+ + +SA +G++ LI +
Sbjct: 273 GDSAGYLRRLRDRLGAECARAGLGTGSGSGSGSGSKPKLPDVLLISAKTGYGVEELISTL 332
Query: 300 VDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGGDGEEKNIVSHLTEAPVPGTTLG 358
RG+V+ +GA NAGKSTL N + +S +G + ++ +S P PGTTL
Sbjct: 333 QRSWRYRGDVYLVGATNAGKSTLFNTLLQSDYCTAKGAEAIDRATIS-----PWPGTTLN 387
Query: 359 IVRVEGVLPAQAKLFDTPGLLHPNQITTR--LTREEQKLVNINKELKPRTYRI-KAGHSI 415
+++ P ++F L + L+++EQK +N LK Y + + G +
Sbjct: 388 LLKFPISNPTPYRMFKRHKRLKEDAAKAEEDLSKQEQKHLN---HLKKCGYLVGRVGKTF 444
Query: 416 HIA 418
H +
Sbjct: 445 HYS 447
>gi|13543019|gb|AAH05689.1| 2610024G14Rik protein, partial [Mus musculus]
Length = 387
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 5/169 (2%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ + I LT +E V + PRT+ +K G + + G+ R+D + + +
Sbjct: 189 FYDTPGITKESCILNLLTEKEINTVLPTHSIIPRTFVLKPGMVLFLGGIARIDFLQGN-Q 247
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELGKWVRKEFHVSG 489
S + TV AS +LP+H+ + A + EKH G +L P G++R+ + V ++ + G
Sbjct: 248 SAWFTVVASNFLPVHITSLDKADALYEKHAGHELLLVPMGGKERMAQFPPLVAEDITLKG 307
Query: 490 SSWDSSSVDIAAAGLGWFSVRLKGEAALGV--WTYEGVDIVLRNALLPY 536
+ DI + GW +V E L + T EG + + +LPY
Sbjct: 308 GGKFEAVADIKFSSAGWVAVTPYSEGTLHLRGHTPEGTALTVHPPVLPY 356
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 11/133 (8%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA +G++ +I + RG+V+ +G NAGKSTL N + +S +G
Sbjct: 6 VKDVRLISAKTGYGVEEMISALQRSWRYRGDVYLVGTTNAGKSTLFNTLLESDYCTAKGS 65
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR--LTREEQK 394
+ ++ +S P PGTTL +++ P ++F L + L+ EEQ
Sbjct: 66 EAIDRATIS-----PWPGTTLNLLKFPICNPTPYRMFKRQRRLQEDATKAEEDLSEEEQS 120
Query: 395 LVNINKELKPRTY 407
+N +LK Y
Sbjct: 121 QLN---QLKKHGY 130
>gi|196013785|ref|XP_002116753.1| hypothetical protein TRIADDRAFT_60700 [Trichoplax adhaerens]
gi|190580731|gb|EDV20812.1| hypothetical protein TRIADDRAFT_60700 [Trichoplax adhaerens]
Length = 659
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 87/174 (50%), Gaps = 11/174 (6%)
Query: 372 LFDTPGLLHPNQITTRL-TREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSV 430
+DTPG + N T L TR+ K++ + + PRT R++ SI +AGL R+D E
Sbjct: 447 FYDTPGAMSQNMYTDLLNTRDLSKVLPLGG-ITPRTLRLQPSQSIFLAGLGRIDYIEGP- 504
Query: 431 ESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWV----RKEFH 486
+Y T +AS LPLH+ +T A + +KHFG L + GK KEF
Sbjct: 505 SRVYFTFFASRELPLHICQTMKADDIYDKHFGYSLLKIPNNMNKQYQGKSFPRLQGKEFT 564
Query: 487 VSG-SSWDSSSVDI--AAAGLGWFSVRLKGEAALGVWTYEGVDIVLRN-ALLPY 536
+ W SS DI ++AG + L E + +T G+ ++LR +++PY
Sbjct: 565 FKCHNGWKYSSADILLSSAGFAAITAGLGDEIKIKAYTPNGLGLILRRPSVMPY 618
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 117/251 (46%), Gaps = 46/251 (18%)
Query: 117 LVHVANESEFSNSLKKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENL 176
+ H NE +F L++ LV A +S ++C RC L HY + ++
Sbjct: 160 IFHSRNEDKFGYILQRK-LVDVPASQVSS--------IICQRCFCLNHYNQALNMNA--- 207
Query: 177 LPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGK 236
P+ D+ + + + + +V++VVD DF GS + ++
Sbjct: 208 -PEDDWRNHIQK----IPKDKCIVMLVVDIFDFPGSIFPNLLDIIG-------------- 248
Query: 237 SGNVPRVVLVVTKIDLL----PSSLSPTRFEHWVRQRAREDGISK--ITKLHFVSAVKNW 290
VP ++L+ K+D+L P + R + V + + G+++ + + VSA KN
Sbjct: 249 -YKVP-ILLIANKMDVLLEDGPGHIE--RIQTMVWEGCKNAGLTEGNLVDICLVSARKNQ 304
Query: 291 GLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEA 350
G+K ++D V+ G+++ +G N GKS+L ++ + DG+ K ++ + T +
Sbjct: 305 GIKEVVDKVLQHRPPHGDIFLLGCTNVGKSSLFKSLLDYL-----YDGKPKTLMRYPTIS 359
Query: 351 PVPGTTLGIVR 361
PGTT+G++R
Sbjct: 360 VWPGTTIGLLR 370
>gi|74178704|dbj|BAE34011.1| unnamed protein product [Mus musculus]
Length = 693
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 5/169 (2%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ + I LT +E V + PRT+ +K G + + G+ R+D + + +
Sbjct: 495 FYDTPGITKESCILNLLTEKEINTVLPTHSIIPRTFVLKPGMVLFLGGIARIDFLQGN-Q 553
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELGKWVRKEFHVSG 489
S + TV AS +LP+H+ + A + EKH G +L P G++R+ + V ++ + G
Sbjct: 554 SAWFTVVASSFLPVHITSLDKADALYEKHAGHELLLVPMGGKERMAQFPPLVAEDITLKG 613
Query: 490 SSWDSSSVDIAAAGLGWFSVRLKGEAALGV--WTYEGVDIVLRNALLPY 536
+ DI + GW +V E L + T EG + + +LPY
Sbjct: 614 GGKFEAVADIKFSSAGWVAVTPYSEGTLHLRGHTPEGTALTVHPPVLPY 662
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 126/357 (35%), Gaps = 102/357 (28%)
Query: 79 PKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVF 138
P C GCG + +P PGY E +F ++
Sbjct: 137 PSGIYCSGCGAELHCQHPGLPGYL-------------------PEEKFRDA--------- 168
Query: 139 EAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARS 198
A+ E + VC RC L H+G+ + V +R
Sbjct: 169 -AQAEGGPAR-----TVCQRCWLLVHHGRALRLQV----------------------SRD 200
Query: 199 VVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLS 258
L +V AA P V MV+ + K +++++ K+DLLP +
Sbjct: 201 QYLELVSAA-LRRPGPALVLYMVNLLDLPDALLPDLPKLVGPKQLIVLGNKVDLLPQD-A 258
Query: 259 PTRFEHWVRQRAREDGI-----------------------------------SKITKLHF 283
P + +R+R +D I + + +
Sbjct: 259 PGYLKR-LRKRLWDDCIRAGLVVAPGHQGPQYPAGDEPLEEIKNQNPSSRSRTVVKDVRL 317
Query: 284 VSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGGDGEEKN 342
+SA +G++ +I + RG+V+ +G NAGKSTL N + +S +G + ++
Sbjct: 318 ISAKTGYGVEEMISALQRSWRYRGDVYLVGTTNAGKSTLFNTLLESDYCTAKGSEAIDRA 377
Query: 343 IVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR--LTREEQKLVN 397
+S P PGTTL +++ P ++F L + L+ EEQ +N
Sbjct: 378 TIS-----PWPGTTLNLLKFPICNPTPYRMFKRQRRLQEDATKAEEDLSEEEQSQLN 429
>gi|303311095|ref|XP_003065559.1| hypothetical protein CPC735_047840 [Coccidioides posadasii C735
delta SOWgp]
gi|240105221|gb|EER23414.1| hypothetical protein CPC735_047840 [Coccidioides posadasii C735
delta SOWgp]
gi|320039370|gb|EFW21304.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 617
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 132/519 (25%), Positives = 207/519 (39%), Gaps = 130/519 (25%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVA-------NESEFSNSLKKGGLV 136
CPGCG L Q + + GY+ R N VR S++ + E+E S
Sbjct: 79 CPGCGALTQWVDKEQAGYYTR---TRNAVR-SYIQEASRDRDATGTENELSAESTDISAK 134
Query: 137 VFEAENETSEVKKHEK---------PVV--CARCHALRHYGKVKDVTVENLLPDFDFDHT 185
V A+ + E K P++ C RCH+L ++ + + L +
Sbjct: 135 VKSADTASGEELKLASGKEELELAAPILPLCDRCHSLVNHREAYPIPYPPL--------S 186
Query: 186 VGRKLMSASGAR-SVVLMVVDAADFDGSFPRKVAKMVSDTAEE--NERA----WKEGKSG 238
R +M S + V ++DAADF S + + +S + N RA ++ GK
Sbjct: 187 YIRDIMEESPWHINHVYHILDAADFPLSLVPDIYRDLSLQTQRSLNRRAKTVTFRHGKRQ 246
Query: 239 NVPRVVLVVTKIDLLPSSLSPTRFEH------WVRQRARE-----DGISKITKLHFVSAV 287
V ++T+ DLL EH ++ Q R+ G ++ +H VSA
Sbjct: 247 T--DVHFIITRADLLGGMK-----EHVDSLMTYMTQVLRDALGPSSGKVRLGNVHMVSAQ 299
Query: 288 KNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAI-AKSVDAGRGGDGEEKNIVSH 346
+ W K + + + + G VW +G N GKS L+ AI KS DA R EE + SH
Sbjct: 300 RGWWTKEVKKKIWE---EGGGVWMVGKANVGKSNLIQAIFPKSPDAARKLRVEENS--SH 354
Query: 347 LT---------------------EAPV-------PGTTLGIVRVEGVLP---AQAKLFDT 375
LT + PV PGTT +R LP + +L D
Sbjct: 355 LTPEFGPLDIEESGLLPPVQNQYDFPVLPIVSSLPGTTASPIR----LPFGQKKGELIDL 410
Query: 376 PGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYV 435
PGL I + + V + K KP +K+ S+ + L+R + + +S+
Sbjct: 411 PGLFR-GGIDEYVQDGFKFDVIMTKRPKPERLTVKSRQSLLLEDLVR--ITPVNFQSV-- 465
Query: 436 TVWASPYLPL--HMGKTENACTMVEKHFGRQL--QPPIGEKR-----------------V 474
+ ASP++PL H+ TE A ++ G++ PPI +K
Sbjct: 466 -ILASPFVPLTPHVTSTEKATEVL---LGQRKPPHPPIAKKGTNKCIASAGVFELKYDVT 521
Query: 475 EELGKWVRKEFHVSGSS----WDSSSVDIAAAGLGWFSV 509
E GK V++ + G + + SVDI G GW +
Sbjct: 522 ERYGKSVKQSKYQDGDNLTALYKIMSVDILIEGCGWVEL 560
>gi|124513752|ref|XP_001350232.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum
3D7]
gi|23615649|emb|CAD52641.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum
3D7]
Length = 2006
Score = 73.6 bits (179), Expect = 3e-10, Method: Composition-based stats.
Identities = 63/249 (25%), Positives = 125/249 (50%), Gaps = 15/249 (6%)
Query: 297 DDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTT 356
+D+ + K N++ +G N+GKS+L+N + K+V ++ ++SH + +PGTT
Sbjct: 1756 NDLKNYYSKNVNIYIVGNANSGKSSLINYLLKNVKN----KEKKNFLISH---SIIPGTT 1808
Query: 357 LGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINK-ELKPRTYRIKAGHSI 415
L ++++ L + DTPG++ N I + L EE K V NK + K + I I
Sbjct: 1809 LKNIKIK--LNKNITINDTPGIISNNSILSYLNFEELKYVVCNKLKNKITSIYINENDYI 1866
Query: 416 HIAGLMRMDVEESSVESIYVTVWASPYLPLHMGK--TENACTMVEKHFGRQ-LQPPIGEK 472
I GL+ + + ++ + S LP+ K +++ +++ L PP E+
Sbjct: 1867 FIGGLLYIHILNIKKYYSIMSFFLSEKLPIIKRKNFSKDPSMFIKQKIKTGFLYPPFKEE 1926
Query: 473 RVEELGKWVRKEFHVSGSSWD--SSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLR 530
R +E+ + + F+++ + D +SS DI G+G+ + ++T + VD++ R
Sbjct: 1927 RFDEINNFKKYYFNINNQAVDIKNSSYDIHIQGMGYITFYSFENIEFNLYTLKNVDVMSR 1986
Query: 531 NALLPYRSQ 539
+++PY +
Sbjct: 1987 PSIMPYHKK 1995
>gi|260889473|ref|ZP_05900736.1| ribosome biogenesis protein GTPase YqeH [Leptotrichia hofstadii
F0254]
gi|260860884|gb|EEX75384.1| ribosome biogenesis protein GTPase YqeH [Leptotrichia hofstadii
F0254]
Length = 283
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 138/300 (46%), Gaps = 35/300 (11%)
Query: 242 RVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVD 301
R ++++ KIDLLP + PT +WV+ R E+ I + F+SA +G+ +I + +
Sbjct: 8 RSIILINKIDLLPDFIHPTEISNWVKDRLAEEDIVP-DDIAFISAKNKYGVNGIIRKIKN 66
Query: 302 LA-GKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIV 360
+ K+ +G N GKS+++N + + + +T + GTTL
Sbjct: 67 IFHNKKVRATVLGVSNVGKSSVINLLLGN---------------NKITTSKYSGTTLK-- 109
Query: 361 RVEGVLP-AQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAG 419
+ +P ++ + DTPGL+ +I+ ++ E + E+ +T++++
Sbjct: 110 SINNKIPNSEITIIDTPGLIPDGRISDLISVENGLKLVPAGEISRKTFKLEENQVFMFDV 169
Query: 420 LMRM-----DVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRV 474
R ++ ES + I+ + +AS + H+ + E ++ ++ LQ
Sbjct: 170 FCRFKILGNELLESGSKPIF-SAYASKSVKFHVAREERVEALLNGNYFEILQGA------ 222
Query: 475 EELGKWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
E K+ + EF V+ + ++ AGLGW +V+ +G + + E V +++R ++
Sbjct: 223 -EKEKYFQNEF-VTHEVEIEENEELVIAGLGWINVK-RGPLKVQLEVPENVKVIVRPSIF 279
>gi|26374633|dbj|BAC25338.1| unnamed protein product [Mus musculus]
Length = 633
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 5/169 (2%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ + I LT +E V + PRT+ +K G + + G+ R+D + + +
Sbjct: 435 FYDTPGITKESCILNLLTEKEINTVLPTHSIIPRTFVLKPGMVLFLGGIARIDFLQGN-Q 493
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELGKWVRKEFHVSG 489
S + TV AS +LP+H+ + A + EKH G +L P G++R+ + V ++ + G
Sbjct: 494 SAWFTVVASNFLPVHITSLDKADALYEKHAGHELLLVPMGGKERMAQFPPLVAEDITLKG 553
Query: 490 SSWDSSSVDIAAAGLGWFSVRLKGEAALGV--WTYEGVDIVLRNALLPY 536
+ DI + GW +V E L + T EG + + +LPY
Sbjct: 554 GGKFEAVADIKFSSAGWVAVTPYSEGTLHLRGHTPEGTALTVHPPVLPY 602
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA +G++ +I + RG+V+ +G NAGKSTL N + +S +G
Sbjct: 252 VKDVRLISAKTGYGVEEMISALQRSWRYRGDVYLVGTTNAGKSTLFNTLLESDYCTAKGS 311
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR--LTREEQK 394
+ ++ +S P PGTTL +++ P ++F L + L+ EEQ
Sbjct: 312 EAIDRATIS-----PWPGTTLNLLKFPICNPTPYRMFKRQRRLQEDATKAEEDLSEEEQS 366
Query: 395 LVN 397
+N
Sbjct: 367 QLN 369
>gi|221058369|ref|XP_002259830.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193809903|emb|CAQ41097.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 1867
Score = 73.6 bits (179), Expect = 3e-10, Method: Composition-based stats.
Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 19/243 (7%)
Query: 305 KRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEG 364
K N++ +G N+GKS+L+N + K+V ++ N ++ + +PGTTL ++++
Sbjct: 1626 KNVNIYMVGNANSGKSSLMNYLLKNVK-------KKDNRNFEISNSIIPGTTLKNIQIK- 1677
Query: 365 VLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINK-ELKPRTYRIKAGHSIHIAGLMRM 423
L + DTPG++ I + L +E K V K + K R+ I I I GL+ +
Sbjct: 1678 -LSKNITINDTPGIISSQSILSCLNFDEMKYVVCTKLKKKVRSIYINKNDYIFIGGLVYI 1736
Query: 424 DVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-----LQPPIGEKRVEELG 478
+ ++ + S +P+ K +N C K + L PP +R +EL
Sbjct: 1737 HILNIKKHYAIMSFFMSEKIPII--KRKNFCKDAGKFLREKIGSGFLYPPFSVERFDELN 1794
Query: 479 KWVRKEFHVSGS--SWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLPY 536
+ F+++ DS S DI GLG + + T VD+V R++L+PY
Sbjct: 1795 NFKDCYFNITNPCVDRDSGSYDIHIQGLGCITFYSFENIEFYLHTLNNVDVVSRSSLMPY 1854
Query: 537 RSQ 539
+
Sbjct: 1855 HKK 1857
>gi|255947052|ref|XP_002564293.1| Pc22g02490 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591310|emb|CAP97537.1| Pc22g02490 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 637
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 177/449 (39%), Gaps = 105/449 (23%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKV---RKSHLVH-VANESEFSNSLKKGGLVVF 138
CPGCG Q PGY+ + + K+ RK + H + ++E ++ G +
Sbjct: 81 CCPGCGAFSQTVEENEPGYYGTSRKQIRKLLAARKEAIEHEIIQQNE---AISTEGDKLS 137
Query: 139 EAENETSEVKKHEKPV-----------------------VCARCHALRHYGKVKDVTVEN 175
+++T E KP+ VC RCH L H+ K
Sbjct: 138 AQQDDTVEEAVPPKPIQAFPDEAIDPENNFLGPPGRITEVCDRCHDLIHHNKAVSSPKPT 197
Query: 176 LLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKV--AKMVSDTAEENERAWK 233
+L ++ L + + V ++DAADF S ++ A M+ + N R+
Sbjct: 198 IL-------SIRNYLEESPHRHNRVYHIIDAADFPMSLVPRIHWALMLQEQRSRNRRSTN 250
Query: 234 EG--KSGNVPRVVLVVTKIDLLPSSLSPTRFE-HWVRQR-----AREDGISKITKLHFVS 285
E + +P + ++T+ DLL ++ + ++R R +++ +H +S
Sbjct: 251 EKYERGRKLPSLSFIITRSDLLAATKEQVDSKMDYIRTELRAALGRSGREARLGNVHMIS 310
Query: 286 AVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAI----AKSVD------AGRG 335
A + W K + +++ + G +W +G N GKS+ + A +++VD R
Sbjct: 311 AHRGWWTKEVKEEIREHG---GGIWVVGKANVGKSSFIEACFPKDSRNVDKIEEWLQRRR 367
Query: 336 GDGEEKNIV--------SHLTEAP-------------VPGTTLGIVRVEGVLPAQAKLFD 374
G+ E N S L AP +PGTT+ +R+ + ++ D
Sbjct: 368 GEDEIPNRPEATLLNPDSLLPPAPREDLYPVLPVVSSLPGTTVSPIRIP-FGRGKGEVID 426
Query: 375 TPGLLHPNQITTRLTREEQKL-VNINKELKPRTYRIKAGHS-------IHIAGLMRMDVE 426
PGL + R+E K + + K +KP IK G S I I + D
Sbjct: 427 LPGL--ERGLLEDFVRDEHKRDLIMTKRIKPERSTIKPGQSLLLGGGLIRITAVNPQD-- 482
Query: 427 ESSVESIYVTVWASPYLPL--HMGKTENA 453
TV ++ +LPL H+ T+ A
Sbjct: 483 ---------TVMSASFLPLESHITNTQKA 502
>gi|426344419|ref|XP_004038767.1| PREDICTED: nitric oxide-associated protein 1 [Gorilla gorilla
gorilla]
Length = 346
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 95/196 (48%), Gaps = 13/196 (6%)
Query: 351 PVPGTTLGIVRVEGVLPAQAK-----LFDTPGLLHPNQITTRLTREEQKLVNINKELKPR 405
PV GT +VE L AQ +DTPG+ N I LT +E +V + + PR
Sbjct: 118 PVTGTHKSTKQVE--LTAQDVKDAHWFYDTPGITKENCILNLLTEKEVNIVLPTQSIVPR 175
Query: 406 TYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ- 464
T+ +K G + + + R+D + + +S + TV AS LP+H+ + A + +KH G
Sbjct: 176 TFVLKPGMVLFLGAIGRIDFLQGN-QSAWFTVVASNILPVHITSLDRADALYQKHAGHTL 234
Query: 465 LQPPIGEK-RVEELGKWVRKEFHVSGSSWDSSSV-DIAAAGLGWFSV--RLKGEAALGVW 520
LQ P+G K R+ V ++ + S +V DI + GW SV K L +
Sbjct: 235 LQIPMGGKERMAGFPPLVAEDIMLKEGLGASEAVADIKFSSAGWVSVTPNFKDRLHLRGY 294
Query: 521 TYEGVDIVLRNALLPY 536
T EG + +R LLPY
Sbjct: 295 TPEGTVLTVRPPLLPY 310
>gi|70934171|ref|XP_738352.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56514498|emb|CAH86244.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 340
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 94/191 (49%), Gaps = 15/191 (7%)
Query: 243 VVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWG-------LKSL 295
++ +V KID LP S + + W R R+ + I L F+SA+K + +K+
Sbjct: 144 IIWLVNKIDCLPKSTNLDIIKIWFRNMIRQIKNTHINDLIFISALKCYNYNILEERMKTY 203
Query: 296 IDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGT 355
ID K +++ +G N GKS+ LN+ K ++ GD K +T + +P T
Sbjct: 204 ID-----IDKGIDIYIVGCVNVGKSSFLNSFLKFINYKHIGDIYSKRKKGGVTVSNIPYT 258
Query: 356 TLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTRE-EQKLVNINKELKPRTYRIKAGHS 414
TL + L + DT G+ Q ++ L ++ + + INK+++P TY++K +S
Sbjct: 259 TLNYNVFK--LKKDVNIIDTIGIPTKYQYSSILYKDIDLNSIIINKKIQPFTYKLKDDYS 316
Query: 415 IHIAGLMRMDV 425
I + L +++
Sbjct: 317 IILGSLCYINL 327
>gi|157117920|ref|XP_001653101.1| hypothetical protein AaeL_AAEL008095 [Aedes aegypti]
gi|108875942|gb|EAT40167.1| AAEL008095-PA [Aedes aegypti]
Length = 689
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 134/313 (42%), Gaps = 74/313 (23%)
Query: 70 RDGNYDEATPKLTV----CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESE 125
R Y PK V C GCG L+Q P PGY PSQ K L
Sbjct: 167 RKSFYGTPDPKEPVSNIPCGGCGALLQCAEPSIPGYL--PSQLFKGRSKQQL-------- 216
Query: 126 FSNSLKKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHT 185
+TS +C RCH L++Y +VTV PD D+
Sbjct: 217 -----------------QTS---------ICQRCHFLKNYNTAINVTVS---PD-DYVEM 246
Query: 186 VGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVL 245
+ S +++VL++VD DF S +++++ G +++
Sbjct: 247 IS----SIRDKKALVLLLVDLLDFPCSIWPGLSEIL----------------GPDRSIIV 286
Query: 246 VVTKIDLLPSSLSPTRFEHWVRQRAR---EDGISK--ITKLHFVSAVKNWGLKSLIDDVV 300
V K+DLLP P ++ + E G +K I + +SA +G++ LI +
Sbjct: 287 VGNKVDLLPRD-CPGYLDNIRNNLTKTFLEAGFTKNNIKHVSLISATTGYGVEQLITKIH 345
Query: 301 DLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIV 360
++ G RG+V+ +G N GKS+L NA+ +S D + + ++V T P PGTTL ++
Sbjct: 346 NVWGTRGDVYLVGCTNVGKSSLFNALLRS-DLCK---VKASDLVQRATACPWPGTTLKML 401
Query: 361 RVEGVLPAQAKLF 373
+ + P+ +L+
Sbjct: 402 KFPILRPSDHRLY 414
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 11/172 (6%)
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES 432
+DTPG++ P QIT LT +E L + ++PR Y +K G ++ +AGL R+D E ES
Sbjct: 497 YDTPGVVQPEQITNLLTTDELLLTLPKQMIRPRAYLMKTGLTLFLAGLGRLDYIEGP-ES 555
Query: 433 IYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEKRVEELGKW----VRKEFHV 487
V ++ASP LP + T +A + + G + L+ P + + L KW + +
Sbjct: 556 TRVLLYASPNLPTLICDTAHAHEIYQNLLGTEYLRVPRADP--DRLAKWPALQAGPDILL 613
Query: 488 SGSSWDSSSVDIAAAGLGWFSVRLKG--EAALGVWTYEGVDIVLRN-ALLPY 536
G S D+ + GW ++ L EA WT E I +R ALLP+
Sbjct: 614 YGEEKHISVADVVLSSAGWIAINLPADSEAVFRAWTPERRGIYVRQPALLPH 665
>gi|193785926|dbj|BAG54713.1| unnamed protein product [Homo sapiens]
Length = 698
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 92/187 (49%), Gaps = 9/187 (4%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPGL N I LT +E +V + + PRT+ +K G + + + R+D + + +
Sbjct: 494 FYDTPGLTKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 552
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEK-RVEELGKWVRKEFHVSG 489
S + TV AS LP+H+ + A + +KH G LQ P+G K R+ V ++ +
Sbjct: 553 SAWFTVVASNILPVHITSLDRADALYQKHAGHTLLQIPMGGKERMAGFPPLVAEDIMLKE 612
Query: 490 SSWDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGF 546
S +V DI + GW SV K L +T EG + +R LLPY + + G
Sbjct: 613 GLGASEAVADIKFSSAGWVSVTPNFKDRLHLRGYTPEGTVLTVRPPLLPY---IVNIKGQ 669
Query: 547 TVSKIIS 553
+ K ++
Sbjct: 670 RIKKSVA 676
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA +G++ LI + RG+V+ +GA NAGKSTL N + +S +G
Sbjct: 310 VRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCTAKGS 369
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN--QITTRLTREEQK 394
+ ++ +S P PGTTL +++ P ++F L + Q L+ +EQ
Sbjct: 370 EAIDRATIS-----PWPGTTLNLLKFPICNPTPYRMFKRHQRLKKDSTQAEEDLSEQEQN 424
Query: 395 LVNINKE 401
+N+ K+
Sbjct: 425 QLNVLKK 431
>gi|9790049|ref|NP_062810.1| nitric oxide-associated protein 1 [Mus musculus]
gi|81906657|sp|Q9JJG9.1|NOA1_MOUSE RecName: Full=Nitric oxide-associated protein 1
gi|7670340|dbj|BAA95022.1| unnamed protein product [Mus musculus]
gi|12857220|dbj|BAB30935.1| unnamed protein product [Mus musculus]
gi|16877845|gb|AAH17154.1| RIKEN cDNA 2610024G14 gene [Mus musculus]
gi|148705986|gb|EDL37933.1| RIKEN cDNA 2610024G14, isoform CRA_a [Mus musculus]
Length = 693
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 5/169 (2%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ + I LT +E V + PRT+ +K G + + G+ R+D + + +
Sbjct: 495 FYDTPGITKESCILNLLTEKEINTVLPTHSIIPRTFVLKPGMVLFLGGIARIDFLQGN-Q 553
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELGKWVRKEFHVSG 489
S + TV AS +LP+H+ + A + EKH G +L P G++R+ + V ++ + G
Sbjct: 554 SAWFTVVASNFLPVHITSLDKADALYEKHAGHELLLVPMGGKERMAQFPPLVAEDITLKG 613
Query: 490 SSWDSSSVDIAAAGLGWFSVRLKGEAALGV--WTYEGVDIVLRNALLPY 536
+ DI + GW +V E L + T EG + + +LPY
Sbjct: 614 GGKFEAVADIKFSSAGWVAVTPYSEGTLHLRGHTPEGTALTVHPPVLPY 662
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 126/357 (35%), Gaps = 102/357 (28%)
Query: 79 PKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVF 138
P C GCG + +P PGY E +F ++
Sbjct: 137 PSGIYCSGCGAELHCQHPGLPGYL-------------------PEEKFRDA--------- 168
Query: 139 EAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARS 198
A+ E + VC RC L H+G+ + V +R
Sbjct: 169 -AQAEGGPAR-----TVCQRCWLLVHHGRALRLQV----------------------SRD 200
Query: 199 VVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLS 258
L +V AA P V MV+ + K +++++ K+DLLP +
Sbjct: 201 QYLELVSAA-LRRPGPALVLYMVNLLDLPDALLPDLPKLVGPKQLIVLGNKVDLLPQD-A 258
Query: 259 PTRFEHWVRQRAREDGI-----------------------------------SKITKLHF 283
P + +R+R +D I + + +
Sbjct: 259 PGYLKR-LRKRLWDDCIRAGLVVAPGHQGPQYPAGDEPLEEIKNQNPSSRSRTVVKDVRL 317
Query: 284 VSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGGDGEEKN 342
+SA +G++ +I + RG+V+ +G NAGKSTL N + +S +G + ++
Sbjct: 318 ISAKTGYGVEEMISALQRSWRYRGDVYLVGTTNAGKSTLFNTLLESDYCTAKGSEAIDRA 377
Query: 343 IVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR--LTREEQKLVN 397
+S P PGTTL +++ P ++F L + L+ EEQ +N
Sbjct: 378 TIS-----PWPGTTLNLLKFPICNPTPYRMFKRQRRLQEDATKAEEDLSEEEQSQLN 429
>gi|269123217|ref|YP_003305794.1| GTP-binding protein HSR1-like protein [Streptobacillus moniliformis
DSM 12112]
gi|268314543|gb|ACZ00917.1| GTP-binding protein HSR1-related protein [Streptobacillus
moniliformis DSM 12112]
Length = 391
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 97/464 (20%), Positives = 170/464 (36%), Gaps = 108/464 (23%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG+L+Q +PK GY V +E SN
Sbjct: 5 CKGCGLLLQSNDPKIDGY------------------VPHEKLISND-------------- 32
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFD---FDHTVGRKLMSASGARSVV 200
++C RC L+HYG ENL + D + V + + A +
Sbjct: 33 ---------KIICKRCFRLKHYG-------ENLEKEEDKLSYQIEVKKAIKEADIIIPIF 76
Query: 201 LMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPT 260
DF+ SF ++ ++ D ++ V+ KIDLLP +
Sbjct: 77 D----IIDFESSFTTEIIDLLEDKT-----------------ILAVINKIDLLPGYIHIA 115
Query: 261 RFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLA--------GKRGNVWAI 312
WV+ E+ + + F+SA +G+ + + +A + I
Sbjct: 116 EVSKWVKYYFSENNVYP-EDVAFISAKNRYGVNGIFRKIQYIAKNILKKSLDSNVKIAVI 174
Query: 313 GAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLG-IVRVEGVLPAQAK 371
G N GKS L+N + EKNI T + GTT +V +
Sbjct: 175 GVSNVGKSNLINLLL------------EKNIS---TVSKFSGTTKKMLVNKKKTKEYMLT 219
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEE--SS 429
+ DTPGL+ +++ L + + + E+ +TYR+K L +V+ +
Sbjct: 220 IIDTPGLIPEGRLSDLLNSDISYKLVPSGEISRKTYRLKEKQVFMFENLAYFEVKNIPDN 279
Query: 430 VESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSG 489
S ++ +AS + H+ E A + + F + L E K+ +F +
Sbjct: 280 KSSAIISAYASREVKFHITNMEKAKELSKNGFFKFLDE-------ENYNKYFSNDF-IKQ 331
Query: 490 SSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNAL 533
+ D AGLG+ V+ +G + + + V ++R ++
Sbjct: 332 DYIIEENEDFVIAGLGYIEVK-RGPLEISAYYPKDVKALVRKSI 374
>gi|157117918|ref|XP_001653100.1| hypothetical protein AaeL_AAEL008086 [Aedes aegypti]
gi|108875941|gb|EAT40166.1| AAEL008086-PA [Aedes aegypti]
Length = 697
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 134/313 (42%), Gaps = 74/313 (23%)
Query: 70 RDGNYDEATPKLTV----CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESE 125
R Y PK V C GCG L+Q P PGY PSQ K L
Sbjct: 167 RKSFYGTPDPKEPVSNIPCGGCGALLQCAEPSIPGYL--PSQLFKGRSKQQL-------- 216
Query: 126 FSNSLKKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHT 185
+TS +C RCH L++Y +VTV PD D+
Sbjct: 217 -----------------QTS---------ICQRCHFLKNYNTAINVTVS---PD-DYVEM 246
Query: 186 VGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVL 245
+ S +++VL++VD DF S +++++ G +++
Sbjct: 247 IS----SIRDKKALVLLLVDLLDFPCSIWPGLSEIL----------------GPDRSIIV 286
Query: 246 VVTKIDLLPSSLSPTRFEHWVRQRAR---EDGISK--ITKLHFVSAVKNWGLKSLIDDVV 300
V K+DLLP P ++ + E G +K I + +SA +G++ LI +
Sbjct: 287 VGNKVDLLPRD-CPGYLDNIRNNLTKTFLEAGFTKNNIKHVSLISATTGYGVEQLITKIH 345
Query: 301 DLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIV 360
++ G RG+V+ +G N GKS+L NA+ +S D + + ++V T P PGTTL ++
Sbjct: 346 NVWGTRGDVYLVGCTNVGKSSLFNALLRS-DLCK---VKASDLVQRATACPWPGTTLKML 401
Query: 361 RVEGVLPAQAKLF 373
+ + P+ +L+
Sbjct: 402 KFPILRPSDHRLY 414
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 11/172 (6%)
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES 432
+DTPG++ P QIT LT +E L + ++PR Y +K G ++ +AGL R+D E ES
Sbjct: 497 YDTPGVVQPEQITNLLTTDELLLTLPKQMIRPRAYLMKTGLTLFLAGLGRLDYIEGP-ES 555
Query: 433 IYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEKRVEELGKW----VRKEFHV 487
V ++ASP LP + T +A + + G + L+ P + + L KW + +
Sbjct: 556 TRVLLYASPNLPTLICDTAHAHEIYQNLLGTEYLRVPRADP--DRLAKWPALQAGPDILL 613
Query: 488 SGSSWDSSSVDIAAAGLGWFSVRL--KGEAALGVWTYEGVDIVLRN-ALLPY 536
G S D+ + GW ++ L EA WT E I +R ALLP+
Sbjct: 614 YGEEKHISVADVVLSSAGWIAINLPADAEAVFRAWTPERRGIYVRQPALLPH 665
>gi|346976477|gb|EGY19929.1| hypothetical protein VDAG_01945 [Verticillium dahliae VdLs.17]
Length = 692
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 178/458 (38%), Gaps = 114/458 (24%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKG----GLVVFE 139
C GCG Q T P GY+ +LN RKS A+E E+ +KKG VV +
Sbjct: 48 CHGCGAFTQTTEPDQAGYY-----DLN--RKSVQKFAASEHEYE--IKKGEIEEDFVVTK 98
Query: 140 AENETSEVKKHEKPV--------------------------VCARCHALRHYGKVKDVTV 173
A E K E + +C RCHAL H+ K +
Sbjct: 99 ALEGLDEHKLQELDLDPRTLLAGEDLETDIPSFPPAPNATPLCNRCHALVHHRKGTPI-- 156
Query: 174 ENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTA-------E 226
P D + + + + + V+DAADF S K+ +++ D +
Sbjct: 157 --FHPSVD---ALRETIEESPFKNNHIYHVIDAADFPMSLVPKLHQLLGDVSLRRRNRRS 211
Query: 227 ENERAWKEGKSGNVPRVVLVVTKIDLL-PSSLSPTRFEHWVRQRAR----EDG-ISKITK 280
R +K+ K + ++T+ DLL P+ ++R+ R E G + ++
Sbjct: 212 RAGRYYKDRKFD----MSFIITRSDLLAPTEKQVNALMPYLREVLRSALGEFGDVVRLGN 267
Query: 281 LHFVSAVKNWGLKSLIDDVVDLAGKRGNV-WAIGAQNAGKSTLLNAI------------- 326
L VSA ++W K L ++ KRG W +G N GKS L A+
Sbjct: 268 LKCVSARRSWWTKDLKQEIY----KRGGAGWMVGKANVGKSQLFQAVFPKGTTADIPFKN 323
Query: 327 ---------------AKSVDAGRGGDGE-------------EKNIVSHLTEAPVPGTTLG 358
K +D G E E N T + +PGTT
Sbjct: 324 AVEVSMFSREEEDENLKYLDDGAENYDERLDLDALLPPARPESNYPEMPTVSSLPGTTAS 383
Query: 359 IVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIA 418
+R+ + +L D PGL+ + + + ++++ + + LKP + IK G S+ +
Sbjct: 384 PIRIP-YGNGKGELIDLPGLVR-SDLELFVQEDKRQALVMQDRLKPEQHSIKPGQSLLLG 441
Query: 419 GLMRMDVEESSVESIYVTVWASPYLPLHMGKTENACTM 456
GL+R + + + I++ +P LP H+ T+ A
Sbjct: 442 GLIR--ITPRTPDLIFLGYNFTP-LPEHLTSTDKAVAF 476
>gi|297673511|ref|XP_002814799.1| PREDICTED: nitric oxide-associated protein 1 [Pongo abelii]
Length = 698
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG++ N I LT +E +V + + PRT+ +K G + + + R+D + + +
Sbjct: 494 FYDTPGIIKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 552
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEK-RVEELGKWVRKEFHVSG 489
S + TV AS LP+H+ + A + +KH G LQ P+G K R+ V ++ +
Sbjct: 553 SAWFTVVASNILPVHITSLDRADALYQKHAGHTLLQIPMGGKERMAGFPPLVPEDIMLKE 612
Query: 490 SSWDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGF 546
S +V DI + GW SV K L +T EG + +R LLPY + + G
Sbjct: 613 GLGASEAVADIKFSSAGWVSVTPNFKDRLHLRGYTPEGTVLTVRPPLLPY---IVNIKGQ 669
Query: 547 TVSKIIS 553
+ K ++
Sbjct: 670 RIKKSVA 676
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA +G++ LI + RG+V+ +GA NAGKSTL N +S +G
Sbjct: 310 VRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTFLESDYCTAKGS 369
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN--QITTRLTREEQK 394
+ ++ +S PGTTL +++ P ++F L + Q L+ +EQ
Sbjct: 370 EAIDRATISSW-----PGTTLNLLKFPICNPTPYRMFKRHQRLKKDSSQAEEDLSEQEQN 424
Query: 395 LVNINKE 401
+N+ K+
Sbjct: 425 QLNVLKK 431
>gi|395542739|ref|XP_003773283.1| PREDICTED: nitric oxide-associated protein 1 [Sarcophilus harrisii]
Length = 376
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 9/187 (4%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG++ N + LT +E K+V + PRT+ +K G + + L R+D + +
Sbjct: 79 FYDTPGIMKENCVLNYLTEKEVKIVLPTHSIVPRTFVLKPGMVLFLGALGRLDYLQGNT- 137
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGE-KRVEELGKWVRKEFHVSG 489
S + +V AS +P+H+ E A + +KH G+ LQ P+G +R+ E V ++ + G
Sbjct: 138 SAWFSVVASNLVPVHITTLEKADGIYQKHAGQTLLQVPMGGVERMAEFPPLVSQDITLEG 197
Query: 490 SSWDSSSVDIAAAGLGWFSVRLKGEAALGV--WTYEGVDIVLRN-ALLPYRSQVFEVAGF 546
+ DI + GW +V E L + +T EG + +R LLP+ + EV G
Sbjct: 198 IGKLEAVADIKLSSAGWVAVTSLSEDKLYLRGYTPEGTAVTVRQPPLLPH---IVEVKGE 254
Query: 547 TVSKIIS 553
+ K ++
Sbjct: 255 RIKKSVA 261
>gi|242133622|gb|ACS87913.1| conserved hypothetical protein [Leptomonas seymouri]
Length = 1023
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 124/589 (21%), Positives = 215/589 (36%), Gaps = 151/589 (25%)
Query: 64 SSLALTRDGNYDEATPKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKV----RKSHLVH 119
++L + ++ P C GCG ++Q N GY +R + V +K+ L H
Sbjct: 358 AALVMEAPSSFHVPVPGRDCCSGCGAMLQSANENEFGY-VRHGEIERYVAQRNQKTQLRH 416
Query: 120 --VANESEFSNSLKKGGLVVFE-------AENETSEVKKHEKPVVCARCHALRHYGKVKD 170
A +E +K G V E E + + +P C RCHAL + G
Sbjct: 417 EYAARMAELQAHWEKHGRQVGEEWLDFMTQEEFDAFYRDTPRPFTCHRCHALENMGVEGR 476
Query: 171 VTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENER 230
V + PDF +L + + VV++VVD DF GS + ++
Sbjct: 477 RKVWS-APDFT------EQLRALKEKKCVVVLVVDITDFPGSMVYNLPGLI--------- 520
Query: 231 AWKEGKSGNVPRVVLVVTKIDLLPSS---------------LSPTRFEHWVRQRAREDGI 275
S N P V++ V K+D + + ++ + WV A + G+
Sbjct: 521 ------SMNNP-VIIAVNKMDCIRNRSFNYSGKDRGVAACLVTESYVRRWVLDIAVQFGL 573
Query: 276 S--KITKLHFVSAVKNWG---LKSLIDDVVDLAGKRGN----VWAIGAQNAGKSTLLNAI 326
+I ++ +SA + WG L S I++ +L +R + + +G N GKS+++NA+
Sbjct: 574 PHHQIKRVVPISAKRGWGVPHLISTIEETANLNLRRPSKPLPTYFVGVANVGKSSVINAM 633
Query: 327 AKSVDAGR--------------GGDGEE-------------------------KNIVSHL 347
A ++ + +G+E K +
Sbjct: 634 AHALYVPQPPHPQSKKVYFTKTNKEGKEAVFWRWYTPPNVNQAEMIDIRGRHDKRASKLM 693
Query: 348 TEAPVPGTTLGI--------------VRVEG--VLPAQAK-----------LFDTPGLLH 380
T + +PGTT+ + R++G AQA +DTPGLL
Sbjct: 694 TVSSLPGTTVAVNAVRISLSPAADKAARLQGPEADTAQAATTDESAEAQTYFYDTPGLLP 753
Query: 381 PNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWAS 440
+ LT + + I K P+ + + GH++ + GL +D+ + V+ S
Sbjct: 754 HWHQRSPLTLLQMRRTLIRKFRNPQCFILLPGHTLFLGGLAAIDIVRGPPRGLLFLVYTS 813
Query: 441 PYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRV--------------EELGKWVRKEFH 486
+ + T + ++ G+ L PP +++ L + F
Sbjct: 814 QKVRNAIVHTVQSDNFWQEQLGKALDPPGSHEQLLPMDNVSAGGAAAAPGLSETKSYLFE 873
Query: 487 VSGSSWDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALLP 535
D+ GLGW S + E D+VLR LP
Sbjct: 874 CYARHRRRPKADVYICGLGWVSFCVS----------EPSDVVLRVRTLP 912
>gi|410931221|ref|XP_003978994.1| PREDICTED: LOW QUALITY PROTEIN: nitric oxide-associated protein
1-like [Takifugu rubripes]
Length = 696
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
LFDTPG++ I + LT +E V + + + PRT+ +K S+ + GL R+D + +
Sbjct: 478 LFDTPGIMKTQDILSLLTEKEVMSVVVTQAIIPRTFVLKPSTSLLVGGLARIDFLQGG-K 536
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELGKWVRKEFHVSG 489
S + +V AS +P+H+ + A + +KH G L P G +R+ + +V ++ + G
Sbjct: 537 SCWFSVMASSQVPVHITSLDKADGVYQKHAGEVLLGVPMGGPERMRQFPAFVPQDLRLEG 596
Query: 490 SSWDSSSVDIAAAGLGWFSV 509
+ ++ DI + GW +V
Sbjct: 597 RGYLEAAADITLSSAGWVAV 616
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 118/296 (39%), Gaps = 68/296 (22%)
Query: 82 TVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAE 141
T CPGCG ++ T P+ PGY PS+ +F L++GGL
Sbjct: 163 TCCPGCGAVLHCTAPEVPGYL--PSE-----------------KFKVLLREGGLT----- 198
Query: 142 NETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVL 201
C RCH L H+ + + V SA R+VV
Sbjct: 199 -----------GATCQRCHLLTHHHRAMSLQV------------------SAEQYRAVVQ 229
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPT- 260
+ + S + E G ++++ KIDLLP SP
Sbjct: 230 NIQPLKALVLLIVDLLDIPDSIVPDLPELV------GTNKHIIVLGNKIDLLPMD-SPNY 282
Query: 261 --RFEHWVRQRAREDGI-SKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNA 317
R + Q + G +++ +H +SA +G+++L+ + +G+V+ +G NA
Sbjct: 283 LQRIRRHLTQCCHDAGFGTQLADIHLISAKTGYGVEALVSSLQRSWKYKGDVYLVGLANA 342
Query: 318 GKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLF 373
GKSTL N + +S D + ++V T +P PGTTL ++ + P ++F
Sbjct: 343 GKSTLFNTLLES-DYCK---SRASDVVHKATISPWPGTTLNXLKFPIMNPTPHRMF 394
>gi|413926893|gb|AFW66825.1| hypothetical protein ZEAMMB73_244891 [Zea mays]
Length = 375
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 126/313 (40%), Gaps = 73/313 (23%)
Query: 81 LTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEA 140
L C GCG +Q PGY
Sbjct: 95 LASCYGCGAPLQTAEEAAPGY--------------------------------------V 116
Query: 141 ENETSEVKKHE---KPVVCARCHALRHYGKVKDVTVENLL---PDFDFDHTVGRKLMSAS 194
+ +T ++KK + V+C RC L H V V F + KL
Sbjct: 117 DPDTYQLKKRHHQLRTVLCGRCKLLSHGHMVTAVGGHGGYPGGKKFVSAEQLREKLSYLR 176
Query: 195 GARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP 254
+++++ +VD DF+GSF +V D A N ++LV+TK+DLLP
Sbjct: 177 HEKALIVKLVDIVDFNGSFLARV----RDFAGANP-------------IILVITKVDLLP 219
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
WV + + ++ + +H S+ G+ +I ++ R +V+ +G+
Sbjct: 220 RDTDLNCIGDWVVESVVKKKLN-VLSVHLTSSKSLVGITGVISEIHQERKGR-DVYILGS 277
Query: 315 QNAGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAK 371
N GKS ++A+ +++ D + K I ++ VPGTTLG +++E L K
Sbjct: 278 ANVGKSAFISAMLRTMAYKDPVAAAAQKYKPI-----QSAVPGTTLGPIQIEAFL-GGGK 331
Query: 372 LFDTPGL-LHPNQ 383
L+DTPG+ LH Q
Sbjct: 332 LYDTPGVHLHHRQ 344
>gi|402593995|gb|EJW87922.1| hypothetical protein WUBG_01170 [Wuchereria bancrofti]
Length = 797
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 101/222 (45%), Gaps = 24/222 (10%)
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE- 431
FDTPG ++ +QI T +E + + PRT+ + + S+ IAG+ ++DV V+
Sbjct: 574 FDTPGTVNSDQILNLFTLDELITILPRTLILPRTFIMHSEESLLIAGVAQIDVISLPVKS 633
Query: 432 -----------SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELG 478
SI +TV+ S LP+ + KT EK+ G L P +R+
Sbjct: 634 ASEKDYPERRPSILLTVFTSEQLPIFIRKTSEISAFREKYLGTSLLVVPAGNAERIARFP 693
Query: 479 KWVRKEFHVSGS-SWDSSSVDIAAAGLGWFSV-RLKGEAALGVWTYEGVDIVLRN-ALLP 535
E + S SW D+ + LGW V +GE L +T EG + LR ALLP
Sbjct: 694 DLKSSEMVLESSGSWKGCG-DVVLSSLGWVCVTSRRGEVRLQAYTPEGRGLFLRTPALLP 752
Query: 536 YRSQ-----VFEVAGFTVSK-IISKADQSLNKSKRLNEAKRK 571
Y +Q + A + V + ++ D S + KR +KR+
Sbjct: 753 YCAQLRGSRIGGTAAYKVKRPVLPDPDVSRKQRKRKTSSKRR 794
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 106/229 (46%), Gaps = 39/229 (17%)
Query: 155 VCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFP 214
+C RC+ L+ + + +V V + D+ H++ + L A ++++VVD D GS
Sbjct: 287 LCRRCYMLKRHNFLLNVNV----CEVDY-HSMMKHLKLKQEA--LIILVVDMCDLPGSIY 339
Query: 215 RKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHW---VRQRAR 271
++ K++ G +++V K+DLLP H+ + +
Sbjct: 340 SELPKII----------------GYQKPMIVVGNKVDLLPPDAHSGFLRHFRQVLHGLLK 383
Query: 272 EDGIS---KITKLHFVSAVKNWGLKSLIDDV-VDLAGK---RGNVWAIGAQNAGKSTLLN 324
E G I + +SA +G++ LI ++ + + + R +++ +G NAGKSTL N
Sbjct: 384 ETGFVDNFNILHMSLISAKTGYGVEDLITNIFLRFSTRDTLRNDMYLVGCTNAGKSTLFN 443
Query: 325 AIAKS-VDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKL 372
A+ +S + R D +V P PGTT+ +++ + P+ KL
Sbjct: 444 ALLQSDLCKVRAVD-----LVERAATTPWPGTTISLLKFPVMNPSPHKL 487
>gi|291401759|ref|XP_002717113.1| PREDICTED: mitochondrial nitric oxide synthase-like [Oryctolagus
cuniculus]
Length = 671
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 5/169 (2%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ N I LT +E +V + + PRT+ +K G + + + R+D + E
Sbjct: 471 FYDTPGISKENCILNLLTEKEVNIVLPTQSIIPRTFVLKPGMVLFLGAIGRLDFLQGK-E 529
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPI-GEKRVEELGKWVRKEFHVSG 489
S + TV AS +LP+H+ + A + +KH G LQ P+ GE+R+ E V ++ +
Sbjct: 530 SAWFTVVASNFLPVHVTYLDRADALYQKHAGHTLLQVPMGGEERMTEFPPLVGEDITLKE 589
Query: 490 SSWDSSSVDIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPY 536
+ DI + GW +V L L +T +G + +R LLP+
Sbjct: 590 GLGSEAVADIKFSSAGWVAVTPHLHDTLHLRGYTPQGTVLTVRPPLLPH 638
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + VSA +G++ LI + RG+V+ +GA NAGKSTL N + +S +G
Sbjct: 287 VRDVRLVSAKTGYGVEELISALQRAWRYRGDVYLVGATNAGKSTLFNTLLESDYCTAKGA 346
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFD 374
+ +K +S P PGTTL +++ P ++F+
Sbjct: 347 EAIDKATIS-----PWPGTTLNLLKFPICNPTPYRMFE 379
>gi|195123554|ref|XP_002006270.1| GI18656 [Drosophila mojavensis]
gi|193911338|gb|EDW10205.1| GI18656 [Drosophila mojavensis]
Length = 547
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 126/311 (40%), Gaps = 70/311 (22%)
Query: 69 TRDGNYDEATPKLTV-CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFS 127
++ G D P TV C GCG + N PGY PS+
Sbjct: 19 SQHGTADATVPPSTVPCNGCGAHLHCANTSMPGYI--PSE-------------------- 56
Query: 128 NSLKKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVG 187
+F+ +T + + C RCH L++Y DV V P + T+
Sbjct: 57 ---------IFKGRTKT-----ELQTITCQRCHFLKNYNIALDVEV----PPSAYVETIS 98
Query: 188 RKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVV 247
R ++ +++VD DF S + +++ G+ V LV
Sbjct: 99 R----IQDKYALAIIIVDLLDFPCSIWPGMQQVI----------------GSKRPVFLVG 138
Query: 248 TKIDLLPSSLSP--TRFEHWVRQRAREDG---ISKITKLHFVSAVKNWGLKSLIDDVVDL 302
K+DLLP + T + ++Q+ E G I + +SA +G++ LI + ++
Sbjct: 139 NKVDLLPRDCNNYLTHVKSCLKQQFIEHGGFNALNIKNVSLISAKTGFGIEELITQLHNV 198
Query: 303 AGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRV 362
+G+V+ +G N GKS+L N + S D R E +V T PGTTL +++
Sbjct: 199 WAYKGDVYLVGCTNVGKSSLFNILLNS-DYCR---PEASELVRKATTCAWPGTTLQMLKF 254
Query: 363 EGVLPAQAKLF 373
+ P+ +++
Sbjct: 255 PILRPSDIRIY 265
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
++DTPG++ P+Q+T LT +E + K LKPR R+ + S+ + GL R+D+ E +
Sbjct: 343 VYDTPGVMQPDQLTPLLTTQELLHLQPTKMLKPRAVRLPSKMSLLLGGLARVDLLECNRS 402
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQP-PIGEKRVEELGKW-----VRKEF 485
+ + V+A+ LP+ + T A + +++ G L P+ L +W + K+
Sbjct: 403 WVKLFVFAAETLPILIADTSAAELVYKRYLGTPLLGVPMSSGDETRLQRWPGLQCMEKDI 462
Query: 486 HVSGSSWDSS------SVDIAAAGLGWFSVRL--KGEAALGVWTYEGVDIVLRN-ALLP 535
V + DS + DI + GW + + E + VWT + I +R AL+P
Sbjct: 463 VVKNGALDSIDDGKQLNCDIVLSSAGWLGLLMPENSECIMRVWTPQAAGIYVRKPALIP 521
>gi|339450987|ref|ZP_08654357.1| GTPase YqeH [Leuconostoc lactis KCTC 3528]
Length = 152
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
L DTPG++ +QI L+ ++ K E+KPRTY++ ++ I GL R D E S E
Sbjct: 5 LIDTPGIIKRDQIAHVLSDKDLKYALPKNEIKPRTYQLNPEQTLFIGGLARFDFE--SGE 62
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSS 491
T + L LH K A EKH G L P K L V+ F + S
Sbjct: 63 RASFTAYFENNLNLHRTKLAGADAFYEKHVGTLLTP--APKTATPL---VKHTFKTTEKS 117
Query: 492 WDSSSVDIAAAGLGWFSVRLKGEAALGVWTYEGVDIVLRNALL 534
DI AGLGW SV + W +GV +++R A++
Sbjct: 118 ------DIVFAGLGWISV--PAGVQVSGWAPQGVSVLIRKAMI 152
>gi|432111608|gb|ELK34710.1| hypothetical protein MDA_GLEAN10015808 [Myotis davidii]
Length = 602
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ N I LT +E +V + PRT+ +K G + + L R+D + S +
Sbjct: 401 FYDTPGITKENCILKLLTEKEVNIVLPTHSIIPRTFVLKPGTVLFLGALGRIDFLQGS-Q 459
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELGKWVRKEFHV-S 488
S + TV AS +LP+H+ E A T+ +KH G L P G++R+ E V ++ +
Sbjct: 460 SAWFTVVASNFLPVHITSLEKADTIYQKHAGDLLLKVPMGGKERMAEFPPLVAEDITLEE 519
Query: 489 GSSWDSSSVDIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPY 536
G + DI + GW +V + K L +T +G + +R LLP+
Sbjct: 520 GLGKPEAVADIKFSSAGWVAVTPQFKDRLHLRGYTPQGTVLTVRPPLLPH 569
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 70/348 (20%), Positives = 126/348 (36%), Gaps = 94/348 (27%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG + +P PGY PS+ R ++ L +
Sbjct: 55 CSGCGAELHCQDPGLPGYL--PSEKFLSARAQ-----------ADGLAR----------- 90
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
VC RC L H+ R+ + +R L +
Sbjct: 91 ----------TVCQRCWLLVHH----------------------RRALRLQVSREQYLQL 118
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
V A P V MV + +++++ K+DLLP +P +
Sbjct: 119 VSTA-LRRPGPALVLYMVDLLDLPDALLPDLPALVGAKQLIVLGNKVDLLPQD-APGYLQ 176
Query: 264 HWVRQRAREDGI---------------------------SKITKLHFVSAVKNWGLKSLI 296
+R+R +D + + + + +SA +G++ LI
Sbjct: 177 R-LRERLWDDCVRAGLQRPPSRGGPPGGKENSSPSAKSGTVLRDVRLISAKTGYGVEELI 235
Query: 297 DDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGGDGEEKNIVSHLTEAPVPGT 355
+ RG+V+ +GA NAGKSTL N + +S +G + ++ +S PGT
Sbjct: 236 SALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCIAKGAEAIDRATISSW-----PGT 290
Query: 356 TLGIVRVEGVLPAQAKLFDTPGLL--HPNQITTRLTREEQKLVNINKE 401
TL +++ P ++F+ L + + L++ E+K +N+ K+
Sbjct: 291 TLNLLKFPICNPTPYRMFERGKRLKKYATEAEEDLSQLEKKQLNLLKK 338
>gi|336468291|gb|EGO56454.1| hypothetical protein NEUTE1DRAFT_65011 [Neurospora tetrasperma FGSC
2508]
gi|350289456|gb|EGZ70681.1| hypothetical protein NEUTE2DRAFT_113649 [Neurospora tetrasperma
FGSC 2509]
Length = 782
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 117/511 (22%), Positives = 197/511 (38%), Gaps = 105/511 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYF------IRPSQNLNKVRKSHLVHVAN---ESEFSN----SL 130
C GCG L Q T P+ GYF ++ L + K ++ ++ E N L
Sbjct: 95 CTGCGALSQTTVPEQAGYFDLSRKAVKEYLGLIEPEKRKVIRSSDRVIEDVLKNIDMEEL 154
Query: 131 KKGGLVV-------FEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFD 183
++ G+ + ++A + E + P +C RCH L H+ K + P D
Sbjct: 155 ERRGVDLKSLLPRDYQANKTSPEPEGPPHPPLCDRCHELIHHRKGNSI----FHPGID-- 208
Query: 184 HTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTA--EENERA----WKEGKS 237
++ + + + V VVDAADF S K+ ++V N RA W G+
Sbjct: 209 -SLRATIEESPYKYNHVYHVVDAADFPMSLIPKLERLVGTLPIRSRNRRAKSETWHAGRQ 267
Query: 238 GNVPRVVLVVTKIDLLP------SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWG 291
N+ ++T+ DLL L P E + R ++ + VSA +NW
Sbjct: 268 INL---SFIITRSDLLAPKKEQVDRLKPYLVETLRQALGRIGNRVRLGNVVCVSARRNWW 324
Query: 292 LKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAI---------------------AKSV 330
K L +++ + G W +G N GKS L + I ++
Sbjct: 325 TKELKEEIFEHGGAN---WMVGRVNVGKSRLFHDIFPQGRMNWQENQKLPVLPAFRNNNI 381
Query: 331 DAGRGGDGE---------EKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
G+ +G+ E N + + +PGTT VRV + +L D PGL
Sbjct: 382 TYGKLDEGDDALLPPAQPETNYPAMPIVSDLPGTTASPVRVP-FGNGKGELIDLPGLSR- 439
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+ + E++ + + + P +K G S+ + G +R+ + ++ VT A
Sbjct: 440 GDLELYIKPEKRADLVMKMRVIPEQAVLKPGQSLLVGGFIRI-----TPKTPDVTFLAYS 494
Query: 442 YLPL--HMGKTENACTMVE--------------------KHFGR-QLQPPIGEKRVEELG 478
+ P+ H+ TE A + E KH G L+ + ++R L
Sbjct: 495 FTPIEAHVTGTEKAIAVQELREDRPNVENIALPETAEKIKHAGSFALKYDVTKQRSGPLT 554
Query: 479 KWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
+ F V + S+DI G+GW V
Sbjct: 555 RKNACGFKVDSLPFRVLSIDILIEGVGWVEV 585
>gi|167973339|ref|ZP_02555616.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 5 str.
ATCC 27817]
gi|167973843|ref|ZP_02556120.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|168362872|ref|ZP_02696046.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|188024028|ref|ZP_02996786.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 7 str.
ATCC 27819]
gi|188524341|ref|ZP_03004373.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|195867501|ref|ZP_03079504.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 9
str. ATCC 33175]
gi|198273761|ref|ZP_03206295.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
gi|225550534|ref|ZP_03771483.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
gi|225551498|ref|ZP_03772444.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 8 str.
ATCC 27618]
gi|171903183|gb|EDT49472.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|184208966|gb|EDU06009.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 5 str.
ATCC 27817]
gi|188019057|gb|EDU57097.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 7 str.
ATCC 27819]
gi|188998016|gb|EDU67113.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|195660000|gb|EDX53380.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|195660745|gb|EDX53999.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 9
str. ATCC 33175]
gi|198249516|gb|EDY74298.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
gi|225379313|gb|EEH01678.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 8 str.
ATCC 27618]
gi|225379688|gb|EEH02050.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
Length = 361
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 130/310 (41%), Gaps = 55/310 (17%)
Query: 152 KPVVCARCHALRHYGKVKDV------TVENLLPDFDFDHTVGRKLMSASGARSVVLMVVD 205
K +C RC L HY K++ V ++N + + DF + + MV+D
Sbjct: 31 KTNLCQRCFKLIHYNKLEKVHTNLNQNIKNTIDNLDF-------------SNLQIFMVLD 77
Query: 206 AADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHW 265
D + + ++ K ++E +++ +V KIDLLP +
Sbjct: 78 ILDLEHTIIDELKK------------YQE-------QIIFLVNKIDLLPHRYNSELVNEN 118
Query: 266 VRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNA 325
V + + G + ++ +VS N LK ++D + + K+ +G N GKS+L+NA
Sbjct: 119 VIKTLVDHGFNN-PQIVYVSTHSNTSLKKVMDCIKNATNKKQKSIFLGKSNVGKSSLINA 177
Query: 326 IAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQIT 385
+ I + LT + TT+ + ++ + + ++ D PG+ I
Sbjct: 178 LLAL-----------NKIKTKLTISSYTNTTINLNKINLL---EHQIIDAPGVCFNENIL 223
Query: 386 TRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPL 445
+ E+ K + I+ K Y+I +I I+GL + V+ + T++ S L +
Sbjct: 224 NYVRDEDNKSIMISYGAKAINYQINPQQAIMISGL--VGVQYLQGQKTTFTLYVSSQLDI 281
Query: 446 HMGKTENACT 455
H K EN T
Sbjct: 282 HRCKLENFIT 291
>gi|209554067|ref|YP_002284911.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
gi|209541568|gb|ACI59797.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
Length = 361
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 130/310 (41%), Gaps = 55/310 (17%)
Query: 152 KPVVCARCHALRHYGKVKDV------TVENLLPDFDFDHTVGRKLMSASGARSVVLMVVD 205
K +C RC L HY K++ V ++N + + DF + + MV+D
Sbjct: 31 KTNLCQRCFKLIHYNKLEKVHTNLNKNIKNTIDNLDF-------------SNLQIFMVLD 77
Query: 206 AADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHW 265
D + + ++ K ++E +++ +V KIDLLP +
Sbjct: 78 ILDLEHTIIDELKK------------YQE-------QIIFLVNKIDLLPHRYNSELVNEN 118
Query: 266 VRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNA 325
V + + G + ++ +VS N LK ++D + + K+ +G N GKS+L+NA
Sbjct: 119 VIKTLVDHGFNN-PQIVYVSTHSNTSLKKVMDCIKNATNKKQKSIFLGKSNVGKSSLINA 177
Query: 326 IAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQIT 385
+ I + LT + TT+ + ++ + + ++ D PG+ I
Sbjct: 178 LLAL-----------NKIKTKLTISSYTNTTINLNKINLL---EHQIIDAPGVCFNENIL 223
Query: 386 TRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPYLPL 445
+ E+ K + I+ K Y+I +I I+GL + V+ + T++ S L +
Sbjct: 224 NYVRDEDNKSIMISYGAKAINYQINPQQAIMISGL--VGVQYLQGQKTTFTLYVSSQLDI 281
Query: 446 HMGKTENACT 455
H K EN T
Sbjct: 282 HRCKLENFIT 291
>gi|21758184|dbj|BAC05262.1| unnamed protein product [Homo sapiens]
Length = 623
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 9/187 (4%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ N I LT +E +V + + PRT+ +K G + + + R+D + + +
Sbjct: 419 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 477
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEK-RVEELGKWVRKEFHVSG 489
S + TV AS LP+H+ + A + +KH G LQ P+G K R+ V ++ +
Sbjct: 478 SAWFTVVASNILPVHITSLDRADALYQKHAGHTLLQIPMGGKERMAGFPPLVAEDIMLKE 537
Query: 490 SSWDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGF 546
S +V DI + GW SV K L +T EG + +R LLPY + + G
Sbjct: 538 GLGASEAVADIKFSSAGWVSVTPNFKDRLHLRGYTPEGTVLTVRPPLLPY---IVNIKGQ 594
Query: 547 TVSKIIS 553
+ K ++
Sbjct: 595 RIKKSVA 601
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA G++ LI + RG+V+ +GA NAGKSTL N + +S +G
Sbjct: 235 VRDVRLISAKTGCGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCTAKGS 294
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN--QITTRLTREEQK 394
+ ++ +S P PGTTL +++ P ++F L + Q L+ +EQ
Sbjct: 295 EAIDRATIS-----PWPGTTLNLLKFPICNPTPYRMFKRHQRLKKDSTQAEEDLSEQEQN 349
Query: 395 LVNINKE 401
+N+ K+
Sbjct: 350 QLNVLKK 356
>gi|14150078|ref|NP_115689.1| nitric oxide-associated protein 1 [Homo sapiens]
gi|93204549|sp|Q8NC60.2|NOA1_HUMAN RecName: Full=Nitric oxide-associated protein 1
gi|13436155|gb|AAH04894.1| Chromosome 4 open reading frame 14 [Homo sapiens]
gi|119625923|gb|EAX05518.1| chromosome 4 open reading frame 14 [Homo sapiens]
gi|123981912|gb|ABM82785.1| chromosome 4 open reading frame 14 [synthetic construct]
gi|123996745|gb|ABM85974.1| chromosome 4 open reading frame 14 [synthetic construct]
Length = 698
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 9/187 (4%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ N I LT +E +V + + PRT+ +K G + + + R+D + + +
Sbjct: 494 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 552
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEK-RVEELGKWVRKEFHVSG 489
S + TV AS LP+H+ + A + +KH G LQ P+G K R+ V ++ +
Sbjct: 553 SAWFTVVASNILPVHITSLDRADALYQKHAGHTLLQIPMGGKERMAGFPPLVAEDIMLKE 612
Query: 490 SSWDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGF 546
S +V DI + GW SV K L +T EG + +R LLPY + + G
Sbjct: 613 GLGASEAVADIKFSSAGWVSVTPNFKDRLHLRGYTPEGTVLTVRPPLLPY---IVNIKGQ 669
Query: 547 TVSKIIS 553
+ K ++
Sbjct: 670 RIKKSVA 676
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA +G++ LI + RG+V+ +GA NAGKSTL N + +S +G
Sbjct: 310 VRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCTAKGS 369
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN--QITTRLTREEQK 394
+ ++ +S P PGTTL +++ P ++F L + Q L+ +EQ
Sbjct: 370 EAIDRATIS-----PWPGTTLNLLKFPICNPTPYRMFKRHQRLKKDSTQAEEDLSEQEQN 424
Query: 395 LVNINKE 401
+N+ K+
Sbjct: 425 QLNVLKK 431
>gi|397469835|ref|XP_003806545.1| PREDICTED: nitric oxide-associated protein 1 [Pan paniscus]
Length = 698
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 9/187 (4%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ N I LT +E +V + + PRT+ +K G + + + R+D + + +
Sbjct: 494 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 552
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEK-RVEELGKWVRKEFHVSG 489
S + TV AS LP+H+ + A + +KH G LQ P+G K R+ V ++ +
Sbjct: 553 SAWFTVVASNILPVHITSLDRADALYQKHAGHTLLQIPMGGKERMAGFPPLVAEDIMLKE 612
Query: 490 SSWDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGF 546
S +V DI + GW SV K L +T EG + +R LLPY + + G
Sbjct: 613 GLGASEAVADIKFSSAGWVSVTPNFKDRLHLRGYTPEGTVLTVRPPLLPY---IVNIKGQ 669
Query: 547 TVSKIIS 553
+ K ++
Sbjct: 670 RIKKSVA 676
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 131/368 (35%), Gaps = 102/368 (27%)
Query: 72 GNYDEATPKLTV-CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSL 130
G+ D A P V C GCG + +P PGY R E +
Sbjct: 128 GHPDPALPPSGVNCSGCGAELHCQDPGVPGYLPR------------------EKFLRTAE 169
Query: 131 KKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKL 190
GGL VC RC L H+ R+
Sbjct: 170 ADGGLAR----------------TVCQRCWLLSHH----------------------RRA 191
Query: 191 MSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKI 250
+ +R L +V AA P V MV + +++++ K+
Sbjct: 192 LRLQVSREQYLELVSAA-LRRPGPSLVLYMVDLLDLPDALLPDLPALVGPKQLIVLGNKV 250
Query: 251 DLLPSSLSPTRFEHWVRQRARED----GI------------------------------S 276
DLLP +P + +R+R ED G+ +
Sbjct: 251 DLLPQD-APG-YRQRLRERLWEDCARAGLLLAPGHQGPQRPVKEEPQDGENPNPPNWSRT 308
Query: 277 KITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRG 335
+ + +SA +G++ LI + RG+V+ +GA NAGKSTL N + +S +G
Sbjct: 309 VVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCTAKG 368
Query: 336 GDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN--QITTRLTREEQ 393
+ ++ +S P PGTTL +++ P ++F L + Q L+ +EQ
Sbjct: 369 SEAIDRATIS-----PWPGTTLNLLKFPICNPTPYRMFKRHQRLKKDSTQAEEDLSEQEQ 423
Query: 394 KLVNINKE 401
+N+ K+
Sbjct: 424 NQLNVLKK 431
>gi|302667474|ref|XP_003025320.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
gi|291189425|gb|EFE44709.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
Length = 618
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 131/299 (43%), Gaps = 35/299 (11%)
Query: 42 TSSSSSSSFSSQPTNTAPPPLSSSLALTRDGNYDEATPKLTVCPGCGVLMQDTNPKHPGY 101
TS SS++F P + SL T G A P C GCG L Q PK PGY
Sbjct: 41 TSFPSSTAFPLAPRQQRQHNSTESLQTTGKGLETWALPD--TCHGCGALTQWVYPKEPGY 98
Query: 102 FIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENETSEVKKHEKPVV--CARC 159
+ K K ++ HV + + + +E ++ E K+ E + C RC
Sbjct: 99 YT----VTRKPVKQYIRHVTQGKQ--AEVDASHIAAYENKH-APEPKEPEDIAIPLCDRC 151
Query: 160 HALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLMVVDAADFDGSFPRKVA 218
H L ++G+ + + L + R L+ S + + VVDAADF S +
Sbjct: 152 HNLINHGEGEPIPYPTL--------SYIRDLIEESPFHNNYIYHVVDAADFPLSVIPNLQ 203
Query: 219 KM--VSDTAEENERAW--KEGKSGNVPRVVLVVTKIDLL----PSSLSPTRFEHWVRQRA 270
+ + +N R+ K G S + + V+T+ DLL P + S ++ + ++
Sbjct: 204 RYMPIQPQRSQNRRSHTKKYGSSRYLAELNFVITRADLLSNVKPQADSLMKYMVEILRQT 263
Query: 271 ---REDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAI 326
+E GI ++ +H VS+ + W K + D+ + + G VW +G N GKS L+ ++
Sbjct: 264 LDRKEHGI-RLGNVHMVSSYRGWWTKEIKQDIWN---QGGGVWMVGKVNVGKSKLITSV 318
>gi|22760732|dbj|BAC11311.1| unnamed protein product [Homo sapiens]
Length = 698
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 9/187 (4%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ N I LT +E +V + + PRT+ +K G + + + R+D + + +
Sbjct: 494 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 552
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEK-RVEELGKWVRKEFHVSG 489
S + TV AS LP+H+ + A + +KH G LQ P+G K R+ V ++ +
Sbjct: 553 SAWFTVVASNILPVHITSLDRADALYQKHAGHTLLQIPMGGKERMAGFPPLVAEDIMLKE 612
Query: 490 SSWDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGF 546
S +V DI + GW SV K L +T EG + +R LLPY + + G
Sbjct: 613 GLGASEAVADIKFSSAGWVSVTPNFKDRLHLRGYTPEGTVLTVRPPLLPY---IVNIKGQ 669
Query: 547 TVSKIIS 553
+ K ++
Sbjct: 670 RIKKSVA 676
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA +G++ LI + RG+V+ +GA NAGKSTL N + +S +G
Sbjct: 310 VRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCTAKGS 369
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN--QITTRLTREEQK 394
+ ++ +S P PGTTL +++ P ++F L + Q L+ +EQ
Sbjct: 370 EAIDRATIS-----PWPGTTLNLLKFPICNPTPYRMFKRHQRLKKDSTQAEEDLSEQEQN 424
Query: 395 LVNINKE 401
+N+ K+
Sbjct: 425 QLNVLKK 431
>gi|260654966|ref|ZP_05860454.1| conserved hypothetical protein [Jonquetella anthropi E3_33 E1]
gi|260630281|gb|EEX48475.1| conserved hypothetical protein [Jonquetella anthropi E3_33 E1]
Length = 374
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 163/429 (37%), Gaps = 97/429 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
CPGCG L Q PG+ PS GL V +
Sbjct: 10 CPGCGALFQSDRSDLPGFI--PS---------------------------GLAVTDK--- 37
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
VC RC LRHYG+ V +LL + ++ +A+ + + V +V
Sbjct: 38 ----------TVCRRCFRLRHYGEGNKAPVNDLLLE--------PQIRAAAASAAAVFLV 79
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
DA D + D E W +G S P V L+VTK DL+ L +
Sbjct: 80 CDALSADRAL---------DGFE-----WLDGVS--CP-VTLLVTKADLVEPYLDRSALG 122
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
WV + G+ ++ +S +KN L++ + D+ + +G NAGKST+L
Sbjct: 123 LWVSE---ATGV-PFEQIQVLSGLKNSDLRNFRLRLQDVFSSGDRLLFLGKTNAGKSTIL 178
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
+++ RGG G T + +PGTT+G+ + L L D PGL +
Sbjct: 179 SSML------RGGSGP--------TVSAMPGTTVGLCEYQ--LEGGIVLLDAPGLKSHDS 222
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY- 442
+ L + + + L + +K G ++ GL R V + V +P
Sbjct: 223 LLPALCPQCLMALTPKRRLVCQELTLKEGSALCFGGLGRAAVVDGGERGWLRAVAVAPEG 282
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKW--VRKEFHVSGSSWDSSSVDIA 500
+ +H E A +V L PP + L + R EF + +D+
Sbjct: 283 VTIHQTSAEKAEELVAAARTDLLSPPC-RTCYDTLSRLPVRRDEFAL------YPGLDLV 335
Query: 501 AAGLGWFSV 509
G+GW +V
Sbjct: 336 VGGVGWLAV 344
>gi|410249398|gb|JAA12666.1| chromosome 4 open reading frame 14 [Pan troglodytes]
gi|410304802|gb|JAA31001.1| chromosome 4 open reading frame 14 [Pan troglodytes]
gi|410331893|gb|JAA34893.1| chromosome 4 open reading frame 14 [Pan troglodytes]
Length = 698
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 9/187 (4%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ N I LT +E +V + + PRT+ +K G + + + R+D + + +
Sbjct: 494 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 552
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEK-RVEELGKWVRKEFHVSG 489
S + TV AS LP+H+ + A + +KH G LQ P+G K R+ V ++ +
Sbjct: 553 SAWFTVVASNILPVHITSLDRADALYQKHAGHTLLQIPMGGKERMAGFPPLVAEDIMLKE 612
Query: 490 SSWDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGF 546
S +V DI + GW SV K L +T EG + +R LLPY + + G
Sbjct: 613 GLGASEAVADIKFSSAGWVSVTPNFKDRLHLRGYTPEGTVLTVRPPLLPY---IVNIKGQ 669
Query: 547 TVSKIIS 553
+ K ++
Sbjct: 670 RIKKSVA 676
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 131/368 (35%), Gaps = 102/368 (27%)
Query: 72 GNYDEATPKLTV-CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSL 130
G+ D A P V C GCG + +P PGY R E +
Sbjct: 128 GHPDPALPPSGVNCSGCGAELHCQDPGVPGYLPR------------------EKFLRTAE 169
Query: 131 KKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKL 190
GGL VC RC L H+ R+
Sbjct: 170 ADGGLAR----------------TVCQRCWLLSHH----------------------RRA 191
Query: 191 MSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKI 250
+ +R L +V AA P V MV + +++++ K+
Sbjct: 192 LRLQVSREQYLELVSAA-LRRPGPSLVLYMVDLLDLPDALLPDLPALVGPKQLIVLGNKV 250
Query: 251 DLLPSSLSPTRFEHWVRQRARED----GI------------------------------S 276
DLLP +P + +R+R ED G+ +
Sbjct: 251 DLLPQD-APG-YRQRLRERLWEDCARAGLLLAPGHQGPQRPVKEEPQDGENPNPPNWSRT 308
Query: 277 KITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRG 335
+ + +SA +G++ LI + RG+V+ +GA NAGKSTL N + +S +G
Sbjct: 309 VVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCTAKG 368
Query: 336 GDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN--QITTRLTREEQ 393
+ ++ +S P PGTTL +++ P ++F L + Q L+ +EQ
Sbjct: 369 SEAIDRATIS-----PWPGTTLNLLKFPICNPTPYRMFKRHQRLKKDSTQAEEDLSEQEQ 423
Query: 394 KLVNINKE 401
+N+ K+
Sbjct: 424 NQLNVLKK 431
>gi|424844826|ref|ZP_18269437.1| putative GTPase [Jonquetella anthropi DSM 22815]
gi|363986264|gb|EHM13094.1| putative GTPase [Jonquetella anthropi DSM 22815]
Length = 370
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 163/429 (37%), Gaps = 97/429 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
CPGCG L Q PG+ PS GL V +
Sbjct: 6 CPGCGALFQSDRSDLPGFI--PS---------------------------GLAVTDK--- 33
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
VC RC LRHYG+ V +LL + ++ +A+ + + V +V
Sbjct: 34 ----------TVCRRCFRLRHYGEGNKAPVNDLLLE--------PQIRAAAASAAAVFLV 75
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
DA D + D E W +G S P V L+VTK DL+ L +
Sbjct: 76 CDALSADRAL---------DGFE-----WLDGVS--CP-VTLLVTKADLVEPYLDRSALG 118
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
WV + G+ ++ +S +KN L++ + D+ + +G NAGKST+L
Sbjct: 119 LWVSE---ATGV-PFEQIQVLSGLKNSDLRNFRLRLQDVFSSGDRLLFLGKTNAGKSTIL 174
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
+++ RGG G T + +PGTT+G+ + L L D PGL +
Sbjct: 175 SSML------RGGSGP--------TVSAMPGTTVGLCEYQ--LEGGIVLLDAPGLKSHDS 218
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASPY- 442
+ L + + + L + +K G ++ GL R V + V +P
Sbjct: 219 LLPALCPQCLMALTPKRRLVCQELTLKEGSALCFGGLGRAAVVDGGERGWLRAVAVAPEG 278
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVEELGKW--VRKEFHVSGSSWDSSSVDIA 500
+ +H E A ++ L PP + L + R EF + +D+
Sbjct: 279 VTIHQTSAEKAEELIAAARTDLLSPPC-RTCYDTLSRLPVRRDEFAL------YPGLDLV 331
Query: 501 AAGLGWFSV 509
G+GW +V
Sbjct: 332 VGGVGWLAV 340
>gi|350418813|ref|XP_003491975.1| PREDICTED: uncharacterized protein C4orf14 homolog [Bombus
impatiens]
Length = 751
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 10/165 (6%)
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES 432
+DTPG + +QI LT +E L + + PRT+ + ++ +AG+ R+D E
Sbjct: 558 YDTPGTIQSDQILNLLTTDELSLTLPQEIITPRTFMFRPKQTVFVAGMGRLDYLEGE-HF 616
Query: 433 IYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEKRVEELGKWVR---KEF-HV 487
I T++AS +LP+ M +T +A + ++ G + PI + E L W + KE +
Sbjct: 617 IRCTLFASEHLPITMCRTTDADEVYDRLLGTSAFRVPIDDS--ERLKVWPKLKPKEIREI 674
Query: 488 SGSSWDSSSVDIAAAGLGWFSVR-LKGEA-ALGVWTYEGVDIVLR 530
+G + + S D+ + +GW ++ L+ E+ +L WT EG I LR
Sbjct: 675 TGVNGEESVADVVLSSIGWIAITPLENESVSLRAWTPEGRGIYLR 719
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 119/297 (40%), Gaps = 77/297 (25%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+ +P PGY PS+ L N+ +
Sbjct: 244 CGGCGALLHCRDPAIPGYL--PSE---------LFSFKNDEDL----------------- 275
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
K + C RCH L+ Y +V V + D+ + L + V+++
Sbjct: 276 --------KSMTCQRCHFLKFYNTALEVKVS--IEDY------PKLLRVIKSKKCAVILI 319
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPR--VVLVVTKIDLLPSSLSPTR 261
+D DF S W + KS P + LV K+DLLP+ SP+
Sbjct: 320 IDLTDFPCSI------------------WPDLKSVLHPFTPIFLVGNKVDLLPTD-SPSF 360
Query: 262 FEHWVRQRAREDGI-------SKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
E+ V+Q + I IT + +SA +G++ LI+ + +G+V+ +G
Sbjct: 361 LEN-VKQCLLDSVIGVTGVKRENITHVQLMSAKTGYGIEHLINKLQYKWRHKGDVYLVGC 419
Query: 315 QNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAK 371
N GKS+L N + S D + + ++V T + PGTTL +++ + P K
Sbjct: 420 TNVGKSSLFNTLLNS-DYCK---VQAIDLVQRATVSAWPGTTLNLLKFPILNPTDKK 472
>gi|195024484|ref|XP_001985881.1| GH21055 [Drosophila grimshawi]
gi|193901881|gb|EDW00748.1| GH21055 [Drosophila grimshawi]
Length = 649
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 92/179 (51%), Gaps = 15/179 (8%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
++DTPG++ P+Q+T LT +E + + LKPR R+ S+ + GL R+D+ + + E
Sbjct: 445 VYDTPGVMQPDQLTPMLTTQELLQLQPTRMLKPRAVRVAPKMSLFLGGLARVDLLDCNQE 504
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQLQP-PIGEKRVEELGKW-----VRKEF 485
+ + V+A+ LPL + T+ A + +++ G L PI + E L +W + ++
Sbjct: 505 WLKLFVFAAETLPLLITDTQQADAIYKRYLGTSLLGLPISGEDDERLQRWPGLQCMDRDI 564
Query: 486 HVSGSSWDSS------SVDIAAAGLGWFSVRL--KGEAALGVWTYEGVDIVLRN-ALLP 535
V + ++ + DI + GW + L E++ +WT + I +R AL+P
Sbjct: 565 LVQNGASENRFAEKQLNCDITLSSAGWLGLLLPENTESSWRLWTPKATGIYVRKPALIP 623
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 33/225 (14%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
+ C RCH L+HY DV V P + T+ R ++ +++VD DF S
Sbjct: 171 ITCQRCHFLQHYNIALDVEV----PPSVYVETISR----IQDKYALAIIIVDLLDFPSSI 222
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP--SSLSPTRFEHWVRQRAR 271
+ +++ G V LV K+DLLP S+ T + ++Q+
Sbjct: 223 WPGMQQVL----------------GAKRPVFLVGNKVDLLPRDSNGYLTHVKRCLKQQFI 266
Query: 272 EDG---ISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAK 328
E G I + +SA +G++ LI + +G+V+ +G N GKS+L N +
Sbjct: 267 EHGGFDALNIKNVSLISAKTGFGIEELITQLHKNWQYKGDVYLLGCTNVGKSSLFNILLN 326
Query: 329 SVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLF 373
S D R E +V T PGTTL +++ + P+ +++
Sbjct: 327 S-DYCR---PEATELVRKATTCAWPGTTLQMLKFPILRPSDLRVY 367
>gi|410957583|ref|XP_003985405.1| PREDICTED: nitric oxide-associated protein 1 [Felis catus]
Length = 696
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 6/168 (3%)
Query: 374 DTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESI 433
DTPG+ N + LT +E +V + PRT+ +K G + + + R+D + + +S
Sbjct: 497 DTPGITKENCVLNLLTEKEVNIVLPTHSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-QSA 555
Query: 434 YVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELGKWVRKEFHVSGSS 491
+ TV AS LP+H+ + A TM +KH G L P GE+R+ V ++ ++
Sbjct: 556 WFTVVASSLLPVHITSLDKADTMYKKHAGHTLLKVPMGGEERMAGFPPLVGEDITLNEGL 615
Query: 492 WDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPY 536
+S +V DI + GW +V + K L +T +G + +R LLPY
Sbjct: 616 GESEAVADIKFSSAGWVAVTPQFKDRLHLRGYTPQGTVLTVRPPLLPY 663
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 17/160 (10%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA +G++ LI + RG+V+ +GA NAGKSTL N + +S +G
Sbjct: 311 LKDVRLISAKTGYGIEELISVLQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCIAKGA 370
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR--LTREEQK 394
+ ++ +S PGTTL +++ P ++F+ L + L+++EQ
Sbjct: 371 EAIDRATISSW-----PGTTLNLLKFPICNPTPYRMFERQKRLKKDATKAEEDLSQQEQH 425
Query: 395 LVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIY 434
+N+ K K G+ + G + EE E+ +
Sbjct: 426 QLNLLK---------KHGYVVGRVGRTFLYSEEQKDEAAF 456
>gi|451856034|gb|EMD69325.1| hypothetical protein COCSADRAFT_208859 [Cochliobolus sativus
ND90Pr]
Length = 749
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 145/356 (40%), Gaps = 54/356 (15%)
Query: 18 HESFLTKITSPYLQLHP-TKALKAPTSSSSSSSFSSQPTNTAPPPLSSSLALTRDGNYDE 76
HE+ + P L P T + P+ + SS++FS+ + P A+ GN+D
Sbjct: 14 HEASIPLFLCPALLRAPITTTRRGPSRARSSTNFST----SRPIKDQVHAAVHPTGNHD- 68
Query: 77 ATPK--------LTVCPGCGVLMQDTNPKHPGYF----------IRPSQNLNKVRKSHLV 118
A+P+ CPGCG Q GY+ + P N+ K +
Sbjct: 69 ASPQNPPASRSLPRACPGCGAPAQIYEQNEAGYYNIDRKAVRAYLNPVPNIPKDTATQED 128
Query: 119 HVANESEFSNSLKKGGLVVFEAENETSEVKKHEKPV-VCARCHALRHY---GKVKDVTVE 174
HV ++ + + G + E + P VC RCH+L H+ + TV+
Sbjct: 129 HVYEKALNNVDPQLLGELGIAEEGKQVPYDNDPPPTPVCDRCHSLLHHRLGSPIHHPTVD 188
Query: 175 NLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF-PRKVAKM-VSDTAEENERAW 232
+ + + + R+ + VVDAADF S P + + + +N RA
Sbjct: 189 ----------AIQQTIAESPHRRNHIYHVVDAADFPLSIVPNLQSSLRIPKLRTQNRRAK 238
Query: 233 KEGKSGN--VPRVVLVVTKIDLL-PSSLSPTRFEHWVRQ-----RAREDGISKITKLHFV 284
+G N + V ++T+ DLL P +VR R++ +++ + V
Sbjct: 239 HKGWVANDRIAEVSFIITRADLLAPKKEQVDALMPYVRDVLRDALGRQNSNARLGNVRLV 298
Query: 285 SAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEE 340
SA + W K + +D+ D + G W +G N GKS L A+ GRG D ++
Sbjct: 299 SAKRGWWTKQVKEDIWD---RGGAGWMVGKVNVGKSNLFEAV---FPKGRGADYQD 348
>gi|332819696|ref|XP_001136575.2| PREDICTED: nitric oxide-associated protein 1 isoform 2 [Pan
troglodytes]
Length = 721
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 9/187 (4%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ N I LT +E +V + + PRT+ +K G + + + R+D + + +
Sbjct: 517 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 575
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEK-RVEELGKWVRKEFHVSG 489
S + TV AS LP+H+ + A + +KH G LQ P+G K R+ V ++ +
Sbjct: 576 SAWFTVVASNILPVHITSLDRADALYQKHAGHTLLQIPMGGKERMAGFPPLVAEDIMLKE 635
Query: 490 SSWDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGF 546
S +V DI + GW SV K L +T EG + +R LLPY + + G
Sbjct: 636 GLGASEAVADIKFSSAGWVSVTPNFKDRLHLRGYTPEGTVLTVRPPLLPY---IVNIKGQ 692
Query: 547 TVSKIIS 553
+ K ++
Sbjct: 693 RIKKSVA 699
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 131/368 (35%), Gaps = 102/368 (27%)
Query: 72 GNYDEATPKLTV-CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSL 130
G+ D A P V C GCG + +P PGY R E +
Sbjct: 151 GHPDPALPPSGVNCSGCGAELHCQDPGVPGYLPR------------------EKFLRTAE 192
Query: 131 KKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKL 190
GGL VC RC L H+ R+
Sbjct: 193 ADGGLAR----------------TVCQRCWLLSHH----------------------RRA 214
Query: 191 MSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKI 250
+ +R L +V AA P V MV + +++++ K+
Sbjct: 215 LRLQVSREQYLELVSAA-LRRPGPSLVLYMVDLLDLPDALLPDLPALVGPKQLIVLGNKV 273
Query: 251 DLLPSSLSPTRFEHWVRQRARED----GI------------------------------S 276
DLLP +P + +R+R ED G+ +
Sbjct: 274 DLLPQD-APG-YRQRLRERLWEDCARAGLLLAPGHQGPQRPVKEEPQDGENPNPPNWSRT 331
Query: 277 KITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRG 335
+ + +SA +G++ LI + RG+V+ +GA NAGKSTL N + +S +G
Sbjct: 332 VVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCTAKG 391
Query: 336 GDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN--QITTRLTREEQ 393
+ ++ +S P PGTTL +++ P ++F L + Q L+ +EQ
Sbjct: 392 SEAIDRATIS-----PWPGTTLNLLKFPICNPTPYRMFKRHQRLKKDSTQAEEDLSEQEQ 446
Query: 394 KLVNINKE 401
+N+ K+
Sbjct: 447 NQLNVLKK 454
>gi|332238539|ref|XP_003268458.1| PREDICTED: nitric oxide-associated protein 1 [Nomascus leucogenys]
Length = 720
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 9/187 (4%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ N I LT +E +V + + PRT+ +K G + + + R+D + + +
Sbjct: 516 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 574
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEK-RVEELGKWVRKEFHVSG 489
S + TV AS LP+H+ + A + +KH G LQ P+G K R+ V ++ +
Sbjct: 575 SAWFTVVASNILPVHITSLDRADALYQKHAGHTLLQVPMGGKERMAGFPPLVAEDIMLKE 634
Query: 490 SSWDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGF 546
S +V DI + GW SV K L +T EG + +R LLPY + + G
Sbjct: 635 GLGASEAVADIKFSSAGWVSVTPNFKDRLHLRGYTPEGTVLTVRPPLLPY---IVNIKGQ 691
Query: 547 TVSKIIS 553
+ K ++
Sbjct: 692 RIKKSVA 698
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 127/355 (35%), Gaps = 101/355 (28%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG +Q +P PGY R E + GGL
Sbjct: 163 CSGCGAELQCQDPGVPGYLPR------------------EKFLRAAEADGGLAR------ 198
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
VC RC L H+ R+ + +R L +
Sbjct: 199 ----------TVCQRCWLLVHH----------------------RRALRLQVSREQYLEL 226
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
V AA + P V MV + +++++ K+DLLP +P +
Sbjct: 227 VSAALWRPG-PSLVLYMVDLLDLPDALLPDLPALVGPKQLIVLGNKVDLLPQD-APG-YR 283
Query: 264 HWVRQRARED----GI------------------------------SKITKLHFVSAVKN 289
+R+R ED G+ + + + +SA
Sbjct: 284 QRLRERLWEDCARAGLLLAPGHQGPQRPVKDEPQDGENSNPPNWSRTVVRDVRLISAKTG 343
Query: 290 WGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGGDGEEKNIVSHLT 348
+G++ LI + RG+V+ +GA NAGKSTL N + +S +G + ++ +S
Sbjct: 344 YGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCTAKGSEAIDRATIS--- 400
Query: 349 EAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN--QITTRLTREEQKLVNINKE 401
P PGTTL +++ P ++F L + Q L+ +EQ +N+ K+
Sbjct: 401 --PWPGTTLNLLKFPICNPTPYRMFKRHQRLKKDSTQAEEDLSEQEQNQLNVLKK 453
>gi|282855625|ref|ZP_06264939.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
gi|282586555|gb|EFB91809.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
Length = 377
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 158/428 (36%), Gaps = 96/428 (22%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
CPGCG + Q + PGY + P +N
Sbjct: 7 CPGCGAVFQSVDENLPGYLV-PGKN----------------------------------- 30
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
++ V+C RC ++HYG V + LL D + + A+ + +V
Sbjct: 31 ------PDEGVLCKRCFQMKHYG----VYRKALLADAGIQKDIRAHALGAAA----LFLV 76
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
+D + + S P D AE ++ V ++ KIDLL +
Sbjct: 77 LDVSRPEISLPD------LDWAESMKKP-----------VFVIANKIDLLEPWTTRKDVL 119
Query: 264 HWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLL 323
W+ +R G+ K ++ VSA + L + D + GA N GKSTLL
Sbjct: 120 QWLSERT---GVRK-EQILLVSAQNRGDMAELRRHIEDTFDADDRLLFAGAANVGKSTLL 175
Query: 324 NAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQ 383
A+ K+ E VS L PGTT+G+ V L D PGL +
Sbjct: 176 GALLKN----------EVPTVSRL-----PGTTVGLTEYRMV--NGPVLVDAPGLKGEDP 218
Query: 384 ITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES-IYVTVWASPY 442
L + ++ K + +K G ++ G+ ++ V ++ + + ++A
Sbjct: 219 FVPVLCPDCLAALSPKKNFQSSIEVLKTGQTVFWGGMAQLTVADAGERGWVRLGIFAPDS 278
Query: 443 LPLHMGKTENACTMVEKHFGRQLQPPIGEKRVE-ELGKWVRKEFHVSGSSWDSSSVDIAA 501
+ +H + E +++ H G L PP + + W +EF + D+
Sbjct: 279 VTIHRTREERIDGLMKDHVGELLVPPCRKCAAKLRTQSWREEEFRIRPEE------DLVV 332
Query: 502 AGLGWFSV 509
G+GW ++
Sbjct: 333 PGIGWVAL 340
>gi|340722480|ref|XP_003399633.1| PREDICTED: uncharacterized protein C4orf14 homolog [Bombus
terrestris]
Length = 753
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 121/297 (40%), Gaps = 77/297 (25%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+ +P PGY PS+ L F+++ +
Sbjct: 246 CGGCGALLHCRDPAIPGYL--PSE---------------------------LFSFKSDED 276
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
K + C RCH LR Y +V V + D+ + L + V+++
Sbjct: 277 L-------KSMTCQRCHFLRFYNTALEVKVS--IEDY------PKLLRVIKSKKCAVILI 321
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPR--VVLVVTKIDLLPSSLSPTR 261
+D DF S W + KS P + LV KIDLLP+ SP+
Sbjct: 322 IDLTDFPCSI------------------WPDLKSILHPFTPIFLVGNKIDLLPTD-SPSF 362
Query: 262 FEHWVRQRAREDGIS-------KITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
E+ V+Q + I+ IT + SA +G++ LI+ + +G+V+ +G
Sbjct: 363 LEN-VKQCLVDSVINVTGVKRENITHVQLTSAKTGYGIEHLINKLQYKWRHKGDVYLVGC 421
Query: 315 QNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAK 371
N GKS+L N + S D + + ++V T + PGTTL +++ + P K
Sbjct: 422 TNVGKSSLFNTLLNS-DYCK---VQAIDLVQRATVSAWPGTTLNLLKFPILNPTDEK 474
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 6/163 (3%)
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES 432
+DTPG + +QI LT +E L + + PRT+ K ++ +AG+ R+D E
Sbjct: 560 YDTPGTIQADQILNLLTTDELSLTLPQEIITPRTFMFKPKQTVFVAGMGRLDYLEGE-HF 618
Query: 433 IYVTVWASPYLPLHMGKTENACTMVEKHFGRQ--LQPPIGEKRVEELGKWVRKEF-HVSG 489
I T++AS YLP+ + T +A + ++ G L P +R++ K KE ++G
Sbjct: 619 IRCTLFASKYLPITICCTADADEVYDRLLGTSAFLVPIDDSERLKVWPKLKPKEIREITG 678
Query: 490 SSWDSSSVDIAAAGLGWFSVR-LKGEA-ALGVWTYEGVDIVLR 530
+ S D+ + +GW ++ L+ E+ +L WT EG I LR
Sbjct: 679 VDGEESVADVVLSSIGWIAITPLENESVSLRAWTPEGRGIYLR 721
>gi|357620128|gb|EHJ72434.1| hypothetical protein KGM_09361 [Danaus plexippus]
Length = 701
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 89/173 (51%), Gaps = 13/173 (7%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
L+DTPG++ +QI + LT EE L K ++P+TY ++ G + I GL R+D+ ES +
Sbjct: 506 LYDTPGVVLSDQILSLLTTEELMLAIPRKLIRPQTYYLREGSTFFIGGLARVDLLESE-D 564
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQL--QPPIGEKRVEELGKW--VRK--EF 485
+ T++ S LP+ + +T A + + G +L P G++R+E +W +R+ +
Sbjct: 565 ACRFTIFCSESLPITVTETRFADEVYDSFVGTELFAVPTGGDERLE---RWPGLRRGGDM 621
Query: 486 HVSGSSWDSSSVDIAAAGLGWFSVRLK--GEAALGVWTYEGVDIVLR-NALLP 535
G D DI + GW +V K G + WT G + R ALLP
Sbjct: 622 EFEGEGPDVCCGDIVLSSAGWAAVTGKAGGRCRVAAWTVGGRGLHRRVPALLP 674
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 135/324 (41%), Gaps = 78/324 (24%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+ +P PGY PS+ ++ + E
Sbjct: 201 CGGCGALLHCNDPAIPGYL--PSE----------IYTGRKVE------------------ 230
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
E+K E C RCH L+ Y DV V+ + L S +S++L++
Sbjct: 231 --ELKTME----CQRCHFLKEYNIALDVNVQA--------EEYEKLLQSIRYVKSLLLVM 276
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLP--SSLSPTR 261
VD DF S + ++ ER V++V K+DLLP S R
Sbjct: 277 VDLLDFPCSLWPGIVDIIG-----TERP-----------VIIVANKVDLLPGDSVGYLKR 320
Query: 262 FEHWVRQRARED--GISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGK 319
+ + ++ G + I + +SA +G++ LI + +G+V+ +G+ N GK
Sbjct: 321 VKECLMSEIQKTKLGEANIKYIALISAKTGYGVEDLISAMFKTWLYKGDVFLVGSTNVGK 380
Query: 320 STLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLL 379
S+L NA+ +S D + +IV T + PGTTL +++ P+ K+
Sbjct: 381 SSLFNALLQS-DYCK---VHAVDIVKRATVSRWPGTTLNLLKFPINRPSGWKI------- 429
Query: 380 HPNQITTRLTREEQKLVNINKELK 403
Q + RL ++KL+ + KE++
Sbjct: 430 --RQRSHRLL-TQRKLMKVEKEIR 450
>gi|302831095|ref|XP_002947113.1| hypothetical protein VOLCADRAFT_120437 [Volvox carteri f.
nagariensis]
gi|300267520|gb|EFJ51703.1| hypothetical protein VOLCADRAFT_120437 [Volvox carteri f.
nagariensis]
Length = 926
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 120/511 (23%), Positives = 204/511 (39%), Gaps = 103/511 (20%)
Query: 83 VCPGCGVLMQDTNPKHPGYFI-------RPSQNLNKVRKSHLVHVANES------EFSNS 129
C GCG ++Q + GY + + L+KV + N + +F
Sbjct: 149 CCYGCGAILQTEVSRGAGYVAPEKYAVRKQRRQLDKVLCQRCSDLCNGAMIPAVQDFPQK 208
Query: 130 LK----KGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLL-PDFDFDH 184
L+ GG FE + E R +++ G T N + D +
Sbjct: 209 LQLRQLVGGATTFEGIESGDGILGREG----LRDQSVKVVGPSAGGTSSNAVGADASTAN 264
Query: 185 TVGRKLMSASGAR----------SVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKE 234
+G+ L+S R ++V+++VD D GS +V MV
Sbjct: 265 LLGKVLVSPEQLRGQLKTLALRAALVVLLVDLTDVAGSLLTRVRDMV------------- 311
Query: 235 GKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKS 294
G P +VLV TK+DLLP P+ W+ A ++ + +H VS+ G+ +
Sbjct: 312 ---GRNP-IVLVGTKMDLLPEGCRPSDVAEWLSGAAATKKLN-VVSVHLVSSHTRDGMSA 366
Query: 295 LIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSV---DAGRGGDGEEKNIVSHLTEAP 351
+ V+ K +V+ +GA N GKS + A+ K + D G G+ + E+
Sbjct: 367 AV-AVICSERKSRDVYVVGAANVGKSAFVRAMLKEMARTDPAALGMGKYLPV-----ESA 420
Query: 352 VPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTRLTREEQKLVNINKELK----PRTY 407
+PGTTLG++ + + LFDTPG+ +++ L+ E KL++ + L P
Sbjct: 421 MPGTTLGLIPLR-AFSSGGVLFDTPGIHLHHRVLHMLSPAELKLLHPRRRLSAYVPPLPV 479
Query: 408 RIKAGHSIHIAGLMRMDVE------ESSVESIY----VTVWASPYLP----LHMGKTENA 453
+ G S + + S+ Y + V PY+P L + ++ +
Sbjct: 480 ELTEGDSDDVGANEVVATNPPVRGPPSTALVFYGPTTLRVVGLPYIPPDKQLQVDYSDGS 539
Query: 454 -------CTMVEKHFGRQLQPPIGEKRVEELGKWVRKEFHVSGSSWDSSSVDIAAAGL-G 505
CT G LQP K V +G++ ++ D+ +GL G
Sbjct: 540 SSTNVLVCTDSVALRG-GLQP----KDV---------VVRANGAAGVAALADVVISGLPG 585
Query: 506 WFSV---RLKGEAALGVWTYEGVDIVLRNAL 533
W SV + K + L +W GV+++LR A+
Sbjct: 586 WVSVCAPKAKQDVRLRIWAPRGVEVMLRPAM 616
>gi|326483076|gb|EGE07086.1| hypothetical protein TEQG_06075 [Trichophyton equinum CBS 127.97]
Length = 939
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 109/255 (42%), Gaps = 27/255 (10%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
C GCG L Q PK PGY+ K K ++ H+ + + +
Sbjct: 401 TCHGCGALTQWVYPKEPGYYT----ITRKPVKQYIRHIVQRKQLDGDASPTSVYENKPAL 456
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGA-RSVVL 201
E+ E + P +C RCH L ++G+ + L + R L+ S + +
Sbjct: 457 ESKESEDIGIP-LCDRCHNLINHGEGDPIPYPTL--------SYIRDLIEESPFHNNYIY 507
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAE--ENERAW--KEGKSGNVPRVVLVVTKIDLLPS-- 255
VVDAADF S + + V + +N R+ K G S + + V+T+ DLL +
Sbjct: 508 HVVDAADFPLSVIPTLQRYVPIQPQRSQNRRSHTKKYGSSRYLAELNFVITRADLLSNVK 567
Query: 256 ----SLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWA 311
SL E + R+D ++ +H VS+ + W K + D+ + + G VW
Sbjct: 568 PQADSLMKYMVEILRQTLDRKDHGIRLGNVHMVSSYRGWWTKEIKQDIWN---QGGGVWM 624
Query: 312 IGAQNAGKSTLLNAI 326
+G N GKS L+ ++
Sbjct: 625 VGKVNVGKSKLITSV 639
>gi|448103670|ref|XP_004200093.1| Piso0_002661 [Millerozyma farinosa CBS 7064]
gi|359381515|emb|CCE81974.1| Piso0_002661 [Millerozyma farinosa CBS 7064]
Length = 581
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 64/261 (24%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C CGV +Q+T+PK GY+ P+ +R+ V F +K+ E N
Sbjct: 41 CSSCGVKLQNTDPKKEGYYQLPTTKPKLIREEDKV-------FDKYIKELSPEDRELLNV 93
Query: 144 TSEVKK-HEKPV--------VCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKL---M 191
+ V K +EKPV C RC + + K F++D L +
Sbjct: 94 SDNVSKANEKPVKEKDGTNIQCIRCRSALYQSK------------FNWDEHPAETLDDVI 141
Query: 192 SASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKID 251
S+ + ++ +V+A DF S ++ + N + ++TK D
Sbjct: 142 SSIPSHGNIVYLVNAMDFPFSLDSRIFQY-----------------RNAKDITFIITKCD 184
Query: 252 LLPSSLS------PTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGK 305
LL SSLS T F ++ ++ DG +K+H VS + +W +++++ ++ D
Sbjct: 185 LLYSSLSMNNKYGATFFRDYLWRKYNVDG----SKVHAVSGLSDWNMEAILKEIPD---- 236
Query: 306 RGNVWAIGAQNAGKSTLLNAI 326
N + IG+ N+GKSTLL ++
Sbjct: 237 --NSYLIGSVNSGKSTLLKSL 255
>gi|302504525|ref|XP_003014221.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
gi|291177789|gb|EFE33581.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
Length = 618
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 133/299 (44%), Gaps = 35/299 (11%)
Query: 42 TSSSSSSSFSSQPTNTAPPPLSSSLALTRDGNYDEATPKLTVCPGCGVLMQDTNPKHPGY 101
TS SS++F P + SL T A P C GCG L Q PK PGY
Sbjct: 41 TSFPSSTAFPLAPRQQRQHNSTESLQATGKNLETWALPD--TCHGCGALTQWVYPKEPGY 98
Query: 102 FIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAE--NETSEVKKHEKPVVCARC 159
+ K K ++ HV + + + + +E++ E+ E + P +C RC
Sbjct: 99 YT----VTRKPVKQYIRHVTQGKQ--SEVDASHIASYESKPAPESKEPEDIAIP-LCDRC 151
Query: 160 HALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGAR-SVVLMVVDAADFDGSFPRKVA 218
H L ++G+ + + L + R L+ S + + VVDAADF S +
Sbjct: 152 HNLINHGEGEPIPYPTL--------SYIRDLIEESPFHNNYIYHVVDAADFPLSVIPNLQ 203
Query: 219 KMVSDTAE--ENERAW--KEGKSGNVPRVVLVVTKIDLL----PSSLSPTRFEHWVRQRA 270
+ V + +N R+ K G S + + V+T+ DLL P + S ++ + ++
Sbjct: 204 RYVPIQPQRSQNRRSHTKKYGSSRYLAELNFVITRADLLSNVKPQADSLMKYMVEILRQT 263
Query: 271 ---REDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAI 326
+E GI ++ +H VS+ + W K + D+ + + G VW +G N GKS L+ ++
Sbjct: 264 LDRKEHGI-RLGNVHMVSSYRGWWTKEIKQDIWN---QGGGVWMVGKVNVGKSKLITSV 318
>gi|255713714|ref|XP_002553139.1| KLTH0D09878p [Lachancea thermotolerans]
gi|338818169|sp|C5DEU6.1|GEP3_LACTC RecName: Full=Genetic interactor of prohibitins 3, mitochondrial;
AltName: Full=Found in mitochondrial proteome protein
38; Flags: Precursor
gi|238934519|emb|CAR22701.1| KLTH0D09878p [Lachancea thermotolerans CBS 6340]
Length = 535
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 109/479 (22%), Positives = 190/479 (39%), Gaps = 75/479 (15%)
Query: 80 KLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFE 139
+ C CGV +Q+ N + G++ P + RK ++ FS L+ +
Sbjct: 20 RFVSCTSCGVTLQNNNVRGTGFYTPPKAQIE--RKRPVIEDLKYLLFSQDLQS-----LK 72
Query: 140 AENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSV 199
+E E K KP++C RC+ H+ N DF +++ A +
Sbjct: 73 SELSAEERPKKNKPLICKRCNDALHH---------NTFSKEDFRRYSMQEVYRHVPAGAD 123
Query: 200 VLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSP 259
+ VV DF P ++ V + N P L+ K +P
Sbjct: 124 IYHVVPLTDF----PLQLNSAVLKDSRYNSALLLSKGDQVTPDKSLLQRK--------AP 171
Query: 260 TRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGK 319
F+ +R + + I SA K W ++S+ + R N + IG N+GK
Sbjct: 172 QFFKDMLRLKMNYNSNKSIA----FSASKGWNIQSVYSVL------RSNSFLIGCPNSGK 221
Query: 320 STLLNAIAK---SVDAGRGGDGEEKNIVSHLTEAPVPGTTLGI------VRVEGVLPAQA 370
STL+NA+ K S+ G + E IV + +P T + +V LP +
Sbjct: 222 STLVNALLKKFPSLKPSEGNNASEAEIVRGAGVSNIPNMTRDLQSYNIGSKVINDLPGYS 281
Query: 371 KLFDTPGLLHPNQITTRLTREEQK--LVNINKELKPRTYRIK---AGHSIHIAGLMRMDV 425
+ +PG + + ++ + QK L K +K R +K AG ++G+ +
Sbjct: 282 TNYGSPG--PEDALDAKVLEKIQKTHLFKKTKLVKQRYTSLKGTDAGRCYTVSGIFYLVP 339
Query: 426 EESSVESI--YVTVWASPYL----PLHMGKTENACTMVEKHFGRQLQPPIG-EKRVEELG 478
++ + Y+ Y L + +E+AC EK RQ +G +K +E
Sbjct: 340 PPDTINQVVNYIPGNERQYRNIDKALSVVNSEHACP--EKGPLRQY---VGVQKAMESKD 394
Query: 479 KWVRKEFHVSGSSWDSSSVDIAAAGLGWFSVRLKGEAA-LG---VWTYEGVDIVLRNAL 533
+VR HV S+++ +G+F ++ G+ LG VW +GVD+ +R +
Sbjct: 395 NYVR---HVLPPF--QGSIEVVLKEIGYFQLKTTGKYKFLGLHEVWVPKGVDVCIREPI 448
>gi|395851373|ref|XP_003798235.1| PREDICTED: nitric oxide-associated protein 1 [Otolemur garnettii]
Length = 688
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 9/187 (4%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
+DTPG+ N I LT EE K+V + PRT+ +K G + + L R+D + + +
Sbjct: 488 FYDTPGITKENCILNLLTEEEVKIVLPTHSIVPRTFVLKPGMVLFLGALGRIDFLQGN-Q 546
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEK-RVEELGKWVRKEFHVSG 489
S + TV AS LP+H+ + A + EK G LQ P+G K R+ V ++ +
Sbjct: 547 SAWFTVVASNLLPVHITSLDKADGVYEKQAGHTLLQVPMGGKERMAGFPSLVAEDIMLQE 606
Query: 490 SSWDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPYRSQVFEVAGF 546
+S +V DI + GW +V ++K L +T G + +R LLP+ + + G
Sbjct: 607 GLGESEAVADIKFSSAGWVAVTPQMKDRLHLRGYTPRGTVLTVRPPLLPH---IVNIKGQ 663
Query: 547 TVSKIIS 553
+ K ++
Sbjct: 664 RIKKSVA 670
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA +G++ LI + RG+V+ +GA NAGKSTL N + KS +G
Sbjct: 304 VRDVRLISAKTGYGIEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLKSDYCTAKGA 363
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFD 374
+ ++ +S PGTTL +++ P ++F+
Sbjct: 364 EAIDRATISSW-----PGTTLNLLKFPICNPTPYRMFE 396
>gi|301765480|ref|XP_002918164.1| PREDICTED: uncharacterized protein C4orf14-like [Ailuropoda
melanoleuca]
Length = 688
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 6/168 (3%)
Query: 374 DTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESI 433
DTPG+ N I LT +E +V + PRT+ +K G + + + R+D + + +S
Sbjct: 490 DTPGITKENCILNLLTEKEVNIVLPTHSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-QSA 548
Query: 434 YVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELGKWVRKEFHVSGSS 491
+ TV AS LP+H+ + A T+ +KH GR L P GE+R+ V ++ +
Sbjct: 549 WFTVVASNLLPVHITSLDRADTVYQKHAGRTLLKVPMGGEERMAGFPPLVGEDITLREGL 608
Query: 492 WDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPY 536
+S +V DI + GW +V + K L +T +G + +R LLP+
Sbjct: 609 GESEAVADIKFSSAGWVAVTPQFKDRLHLRGYTPQGTVLTVRPPLLPH 656
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 130/349 (37%), Gaps = 94/349 (26%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG + +P PGY PS+ + + + GGL
Sbjct: 140 CSGCGAELHCQDPCVPGYL--PSEKFRR---------------AAAQTDGGLAR------ 176
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
VC RC L HY R+ +S +R L +
Sbjct: 177 ----------TVCQRCWLLVHY----------------------RRALSMQMSREQYLEL 204
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
V AA P V MV + +++++ K+DLLP +P +
Sbjct: 205 VSAA-LRRPGPALVLFMVDLLDLPDALLPDLPALVGPRQLIVLGNKVDLLPQD-APGYLQ 262
Query: 264 HWVRQRARED----GI------------------------SKITKLHFVSAVKNWGLKSL 295
+R+R R+D G+ + + + +SA +G++ L
Sbjct: 263 R-LRERLRDDCARVGLLGPCGHQGPQQDGRENSNPPARARTVLRDVRLISAKTGYGVEEL 321
Query: 296 IDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGGDGEEKNIVSHLTEAPVPG 354
I + RG+V+ +GA NAGKSTL N + +S +G + ++ +S P PG
Sbjct: 322 ITALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCIAKGAEAIDRATIS-----PWPG 376
Query: 355 TTLGIVRVEGVLPAQAKLFDTPGLLHPN--QITTRLTREEQKLVNINKE 401
TTL +++ P ++F L + L+++EQ +N+ K+
Sbjct: 377 TTLNLLKFPICNPTPYRMFARQKRLKKTAAEAEEDLSQQEQNQLNLLKK 425
>gi|281352498|gb|EFB28082.1| hypothetical protein PANDA_006562 [Ailuropoda melanoleuca]
Length = 687
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 6/168 (3%)
Query: 374 DTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESI 433
DTPG+ N I LT +E +V + PRT+ +K G + + + R+D + + +S
Sbjct: 490 DTPGITKENCILNLLTEKEVNIVLPTHSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-QSA 548
Query: 434 YVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELGKWVRKEFHVSGSS 491
+ TV AS LP+H+ + A T+ +KH GR L P GE+R+ V ++ +
Sbjct: 549 WFTVVASNLLPVHITSLDRADTVYQKHAGRTLLKVPMGGEERMAGFPPLVGEDITLREGL 608
Query: 492 WDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPY 536
+S +V DI + GW +V + K L +T +G + +R LLP+
Sbjct: 609 GESEAVADIKFSSAGWVAVTPQFKDRLHLRGYTPQGTVLTVRPPLLPH 656
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 130/349 (37%), Gaps = 94/349 (26%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG + +P PGY PS+ + + + GGL
Sbjct: 140 CSGCGAELHCQDPCVPGYL--PSEKFRR---------------AAAQTDGGLAR------ 176
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
VC RC L HY R+ +S +R L +
Sbjct: 177 ----------TVCQRCWLLVHY----------------------RRALSMQMSREQYLEL 204
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPSSLSPTRFE 263
V AA P V MV + +++++ K+DLLP +P +
Sbjct: 205 VSAA-LRRPGPALVLFMVDLLDLPDALLPDLPALVGPRQLIVLGNKVDLLPQD-APGYLQ 262
Query: 264 HWVRQRARED----GI------------------------SKITKLHFVSAVKNWGLKSL 295
+R+R R+D G+ + + + +SA +G++ L
Sbjct: 263 R-LRERLRDDCARVGLLGPCGHQGPQQDGRENSNPPARARTVLRDVRLISAKTGYGVEEL 321
Query: 296 IDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGGDGEEKNIVSHLTEAPVPG 354
I + RG+V+ +GA NAGKSTL N + +S +G + ++ +S P PG
Sbjct: 322 ITALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCIAKGAEAIDRATIS-----PWPG 376
Query: 355 TTLGIVRVEGVLPAQAKLFDTPGLLHPN--QITTRLTREEQKLVNINKE 401
TTL +++ P ++F L + L+++EQ +N+ K+
Sbjct: 377 TTLNLLKFPICNPTPYRMFARQKRLKKTAAEAEEDLSQQEQNQLNLLKK 425
>gi|326469406|gb|EGD93415.1| hypothetical protein TESG_08279 [Trichophyton tonsurans CBS 112818]
Length = 919
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 29/256 (11%)
Query: 83 VCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAEN 142
C GCG L Q PK PGY+ K K ++ H+ + + +
Sbjct: 381 TCHGCGALTQWVYPKEPGYYT----ITRKPVKQYIRHIVQRKQLDGDASPTSVYENKPAL 436
Query: 143 ETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGA-RSVVL 201
E+ E + P +C RCH L ++G+ + L + R L+ S + +
Sbjct: 437 ESKESEDIGIP-LCDRCHNLINHGEGDPIPYPTL--------SYIRDLIEESPFHNNYIY 487
Query: 202 MVVDAADFDGSFPRKVAKMVSDTAE--ENERAW--KEGKSGNVPRVVLVVTKIDLL---- 253
VVDAADF S + + V + +N R+ K G S + + V+T+ DLL
Sbjct: 488 HVVDAADFPLSVIPTLQRYVPIQPQRSQNRRSHTKKYGSSRYLAELNFVITRADLLSNVK 547
Query: 254 PSSLSPTRFEHWVRQRA---REDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVW 310
P + S ++ + ++ +E GI ++ +H VS+ + W K + D+ + + G VW
Sbjct: 548 PQADSLMKYMVEILRQTLDRKEHGI-RLGNVHMVSSYRGWWTKEIKQDIWN---QGGGVW 603
Query: 311 AIGAQNAGKSTLLNAI 326
+G N GKS L+ ++
Sbjct: 604 MVGKVNVGKSKLITSV 619
>gi|355737025|gb|AES12187.1| hypothetical protein [Mustela putorius furo]
Length = 445
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 87/168 (51%), Gaps = 6/168 (3%)
Query: 374 DTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESI 433
DTPG++ N I LT +E V + PRT+ +K G + + + R+D + + +S
Sbjct: 249 DTPGIIKENCILNLLTEKEVNTVLPTHSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-QSA 307
Query: 434 YVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELGKWVRKEFHVSGSS 491
+ TV AS LP+H+ + A T+ +KH G L P GE+R+ E V ++ +
Sbjct: 308 WFTVVASNLLPVHITSLDRADTVYQKHAGHTLLKVPMGGEERMAEFPPLVGEDIILKEGL 367
Query: 492 WDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPY 536
+S +V DI + GW +V +LK L +T +G + +R LLP+
Sbjct: 368 GESKAVADIKFSSAGWVAVTAQLKDRLHLRGYTPQGTVLTVRPPLLPH 415
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA +G++ LI + RG+V+ +GA NAGKSTL N + +S +G
Sbjct: 55 LRDVRLISAKTGYGVEELITALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCIAKGA 114
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN--QITTRLTREEQK 394
+ ++ +S P PGTTL +++ P ++F+ L + L+++EQ
Sbjct: 115 EAIDRATIS-----PWPGTTLNLLKFPICNPTPYRMFERQKRLEKTAAEAEEDLSQQEQH 169
Query: 395 LVN 397
+N
Sbjct: 170 QLN 172
>gi|338723448|ref|XP_001916840.2| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein C4orf14
homolog [Equus caballus]
Length = 698
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 6/168 (3%)
Query: 374 DTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESI 433
DTPG+ N I LT +E +V + PRT+ +K G + + + R+D + S +S
Sbjct: 496 DTPGITKENCILNLLTEKEVNIVLPTHSIVPRTFVLKPGMVLFLGAIGRIDFLQGS-QSA 554
Query: 434 YVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELGKWVRKEFHVSGSS 491
+ TV AS +LP+H+ + A T+ KH G L P GE+R+ V ++ +
Sbjct: 555 WFTVVASNFLPVHVTSLDKADTVYHKHAGHTLLKVPMGGEERMAGFPPLVGEDITLEEGL 614
Query: 492 WDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPY 536
+S +V DI + GW +V K L +T +G + +R LLP+
Sbjct: 615 GESEAVADIKFSSAGWVAVTPHFKDRLRLRGYTPQGTVLTVRTPLLPH 662
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA +G++ LI + RG+V+ +GA NAGKSTL N + +S +G
Sbjct: 311 LRDVRLISAKTGFGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCIAKGA 370
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR--LTREEQK 394
+ +K +S P PGTTL +++ P ++F L + L+++EQ
Sbjct: 371 EAIDKATIS-----PWPGTTLNLLKFPICNPTPYRMFKRQKRLKKDAAVAEEDLSQQEQN 425
Query: 395 LVNINKE 401
+N+ K+
Sbjct: 426 QLNLLKK 432
>gi|327349322|gb|EGE78179.1| hypothetical protein BDDG_01116 [Ajellomyces dermatitidis ATCC
18188]
Length = 672
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 189/473 (39%), Gaps = 129/473 (27%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESE----FSNSLKKGGLVV-- 137
CPGCG Q +P GY+ S N K K ++ + +SE + +++ G +V
Sbjct: 88 CPGCGAFTQWVSPDEAGYY---SIN-RKAVKEYIRRFSPDSEEGASAAENIQNGSNIVEI 143
Query: 138 -----FEAENETSEVKKHE--------KPVVCARCHALRHYGKVKDVT------VENLLP 178
E ++ + HE K C RCH L ++G + +E+++
Sbjct: 144 VDDAPAEGKSAVPSAQPHEDTTPPNDIKVPFCDRCHGLINHGIASPIPYPPISYIEDIIA 203
Query: 179 DFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAE---ENERA--WK 233
+ + H + V ++DAADF S +++++ D A+ +N RA +
Sbjct: 204 ESPYKH-------------NHVYHIIDAADFPMSLIPNISRIL-DLAKLRTQNRRAKNIQ 249
Query: 234 EGKSGNVPRVVLVVTKIDLLPSSLSPTRFEH---WVRQRAREDGISK-----ITKLHFVS 285
G G P + ++T+ DLL S +H +V RE SK + +H VS
Sbjct: 250 YGGGGRKPVLSFIITRSDLLGSQKE--FVDHLMTYVLNVMRESLGSKGENVRLGNVHMVS 307
Query: 286 AVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAI----------AKSVDAGRG 335
A + W K + D + + + G VW +G N GKS+LL + +K +G+
Sbjct: 308 AHRGWWTKEIKDKIWE---EGGGVWMVGKTNVGKSSLLQVVFPKSPKTLPPSKLRASGKF 364
Query: 336 GDGEEKN---------IVSHLTEAPVPG---------------------------TTLGI 359
D + N V H ++ P+PG T I
Sbjct: 365 EDSLQPNSRIWSSTDPSVDH-SDPPLPGELKDPDPKQNKEVNEEVDVLLPPAQKVTQYPI 423
Query: 360 VRVEGVLPA-------------QAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRT 406
+ LP + ++ D PGL + + + + + + K LKP
Sbjct: 424 FPIVSSLPGTTASPIRIPFGKKRGEVIDLPGLSR-GGLQEFVKDDHKADLIMKKRLKPER 482
Query: 407 YRIKAGHSIHI-AGLMRMDVEESSVESIYVTVWASPYLPL--HMGKTENACTM 456
I+ S+ + GL+R+ + V++ + V A+P++P+ H+ TE A M
Sbjct: 483 LTIRPKQSLVLGGGLIRI----TPVDADNIVVLAAPFVPIQPHVTSTEKAILM 531
>gi|344288412|ref|XP_003415944.1| PREDICTED: uncharacterized protein C4orf14-like [Loxodonta
africana]
Length = 700
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 6/168 (3%)
Query: 374 DTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESI 433
DTPG+ N I LT +E +V + PRT+ +K G + + + R+D + + S
Sbjct: 499 DTPGITKENCILNLLTEKEVNVVLPTHSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-HSA 557
Query: 434 YVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELGKWVRKEFHVSGSS 491
+ TV AS LP+H+ + A + +KH G L P GE+R+ E V ++ +
Sbjct: 558 WFTVVASNILPVHITSLDRADAVYQKHAGHTLLKVPMGGEERMAEFPPLVAEDITLEEGL 617
Query: 492 WDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPY 536
+S +V DI + GW +V + K L +T +G + +R LLPY
Sbjct: 618 GESEAVADIKFSSAGWVTVTPQFKDRLHLRGYTPQGTVLTVRPPLLPY 665
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Query: 278 ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGG 336
+ + +SA +G++ LI + RG+V+ +GA NAGKSTL N + +S +G
Sbjct: 312 LRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCIAKGA 371
Query: 337 DGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPN--QITTRLTREEQK 394
+ ++ +S PGTTL +++ P ++F+ L + + LT +EQ
Sbjct: 372 EAIDRATISTW-----PGTTLNLLKFPICNPTPYRMFERQKRLKKDARKAEEDLTEQEQN 426
Query: 395 LVNINKE 401
+N+ K+
Sbjct: 427 QLNLLKK 433
>gi|320165317|gb|EFW42216.1| nitric-oxide synthase [Capsaspora owczarzaki ATCC 30864]
Length = 819
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
LFDTPG++ P+Q RL+ + V K + P+ +R+ G + I GL R+DV S+
Sbjct: 522 LFDTPGIMSPHQSLHRLSAADISAVIPTKLIVPQVFRLNPGQCVFIGGLGRLDVLSSADG 581
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEKRVEELGKWVRKEFHVSGS 490
++ VTV+ S + LH + NA ++H G L PP E R++ S S
Sbjct: 582 AVLVTVFVSNTVKLHATRISNAEDFYQRHLGTPLLSPPF----FNESELAARRQARKSDS 637
Query: 491 SWDSSSVDIAAAG 503
D SS ++ +G
Sbjct: 638 GVDESSTPVSVSG 650
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 34/212 (16%)
Query: 154 VVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSF 213
++C RCH L H ++ V + D H +L + ++ VVD F S
Sbjct: 235 LICKRCHQLTHNNQLLPVQI-------DPAH-FQEQLAPIRSKEAFIVHVVDVTTFPCSS 286
Query: 214 PRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLLPS-SLSPTRFEHWVRQ---- 268
+ + V G+ R+ V +K DLLP +R W+ +
Sbjct: 287 LPNLEEYV----------------GSNQRIFFVGSKADLLPGYDKHLSRIRQWLSRLIIN 330
Query: 269 RAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAK 328
S I +H VS +K G +L+D + L G R +V+ +G N GKSTL+N +
Sbjct: 331 HYSPAVRSHIVGVHLVSGMKGTGCWTLLDAIQRLRGGR-DVYVVGCANVGKSTLVNNLLD 389
Query: 329 SVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIV 360
+ E ++ V+ +T + VPGTT+G++
Sbjct: 390 KLRV----LNESRSPVTSITTSGVPGTTIGLL 417
>gi|194880981|ref|XP_001974627.1| GG21848 [Drosophila erecta]
gi|190657814|gb|EDV55027.1| GG21848 [Drosophila erecta]
Length = 623
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 123/312 (39%), Gaps = 74/312 (23%)
Query: 70 RDGNYDEATPKLTV-CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSN 128
R G D + P V C GCG + +N PGY PS+
Sbjct: 94 RQGTPDPSLPVSKVPCNGCGANLHCSNASLPGYI--PSE--------------------- 130
Query: 129 SLKKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGR 188
+F + + + + C RCH L HY DV V P D T+ R
Sbjct: 131 --------IFRGRTQ-----QELQTISCKRCHFLNHYNIALDVEVA---PSTYVD-TISR 173
Query: 189 KLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVT 248
+ A ++VL VD DF S + ++ G V LV
Sbjct: 174 --IQDKFALAIVL--VDLLDFPCSIWPGMQHIL----------------GTKRPVFLVGN 213
Query: 249 KIDLLPSSLSPTRFEHWVRQRARE-------DGISKITKLHFVSAVKNWGLKSLIDDVVD 301
K+DLLP S +H RE DG++ I + +SA +G++ LI +
Sbjct: 214 KVDLLPRD-SNIYLQHIKDSLQREFIKHGGGDGLN-IKNISLISAKTGYGIEELITQLHK 271
Query: 302 LAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVR 361
+G+V+ +G N GKS+L N + S D R E ++V T P PGTTL ++R
Sbjct: 272 TWAYKGDVYLLGCTNVGKSSLFNILLNS-DYCR---PEATDLVRKATACPWPGTTLKLLR 327
Query: 362 VEGVLPAQAKLF 373
+ P+ +++
Sbjct: 328 FPILRPSSDRVY 339
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 17/181 (9%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEE---- 427
++DTPG++ P+QI+ LT EE + ++PRT+R++ SI + GL R+D+ +
Sbjct: 417 VYDTPGVMQPDQISPLLTAEELVKLQPTTMIRPRTFRLRPQMSILLGGLARLDLLDITSP 476
Query: 428 -SSVESIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIGEKRVE-ELGKW---- 480
+ + V V+AS +LP+ + ++ A ++ +++ G L P + +E L +W
Sbjct: 477 RKQYDWLKVFVFASEHLPILIADSQAAESVYKRYVGSPFLGVPFASEDLEARLRRWPGLQ 536
Query: 481 VRKEFHVSGSSWDSS---SVDIAAAGLGWFSVRLKG--EAALGVWTYEGVDIVLRN-ALL 534
R E V S + + DI + GW L G E L WT I R AL+
Sbjct: 537 CRDEDIVLASEERNEGRLNCDITLSSAGWMGFLLPGHSECRLRAWTPHAAGIYKREPALV 596
Query: 535 P 535
P
Sbjct: 597 P 597
>gi|325296863|ref|NP_001191463.1| nitric oxide synthase-like protein [Aplysia californica]
gi|124357861|gb|ABN05382.1| nitric oxide synthase-like protein [Aplysia californica]
Length = 715
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 90/169 (53%), Gaps = 6/169 (3%)
Query: 372 LFDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVE 431
++DTPG+++P+QI L+ +E + + + PR ++ +I I+GL R+D ++ V
Sbjct: 505 VYDTPGIINPDQIMNLLSPDECTQLTPSSMIIPRAVVLQPQQTIFISGLARIDYLKADV- 563
Query: 432 SIYVTVWASPYLPLHMGKTENACTMVEKHFGRQ--LQPPIGEKRVEELGKWVRKEFHVSG 489
+++TV +S LP+ +G T A E++ G + L P ++++ +L ++F V G
Sbjct: 564 PLFLTVHSSSALPIRIGPTVEADGYYEQYVGSETLLLPMADKQKLSKLPSLAARDFVVKG 623
Query: 490 SSWDSSSVDIAAAGLGWFSVRLKG--EAALGVWTYEGVDIVLRN-ALLP 535
++ D+ + +GW SV K E L +T + LR +LLP
Sbjct: 624 RGTLEAAADVQLSSVGWVSVAAKPDIEVTLRAYTPGAKGLHLRQPSLLP 672
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 109/287 (37%), Gaps = 70/287 (24%)
Query: 79 PKLTVCPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVF 138
P C GCG +Q N PG+ + S + E E S
Sbjct: 176 PSRVPCTGCGAHLQCHNRTLPGFMV-----------SEQFKLLTERELKRS--------- 215
Query: 139 EAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARS 198
+C RC+ ++H + E P+ ++ + + RS
Sbjct: 216 ----------------ICQRCYYMQHCNAFVEAKTE---PE-EYTEMISK----IRPTRS 251
Query: 199 VVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPRVVLVVTKIDLL----P 254
+V++VVD D GS + + G+ +++V K DLL P
Sbjct: 252 LVVIVVDLMDMQGSIVPNLTDYI----------------GHKHPLLVVGNKADLLAPDCP 295
Query: 255 SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGA 314
L + +++ R G+ + + +SA +G++ LI + ++ +V+ +G
Sbjct: 296 EYLRNA--QERLKEACRHSGLKNVKAFNLISAKTGFGMEKLISTLFSFYRRKVDVYIVGT 353
Query: 315 QNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVR 361
N+GKS+L N + S ++++ T + PGTTL +++
Sbjct: 354 ANSGKSSLFNILLSSDYCKHTA----RDLIQRATVSEWPGTTLNLLK 396
>gi|349604286|gb|AEP99881.1| Uncharacterized protein C4orf14-like protein-like protein, partial
[Equus caballus]
Length = 402
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 6/168 (3%)
Query: 374 DTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESI 433
DTPG+ N I LT +E +V + PRT+ +K G + + + R+D + S +S
Sbjct: 200 DTPGITKENCILNLLTEKEVNIVLPTHSIVPRTFVLKPGMVLFLGAIGRIDFLQGS-QSA 258
Query: 434 YVTVWASPYLPLHMGKTENACTMVEKHFGRQLQ--PPIGEKRVEELGKWVRKEFHVSGSS 491
+ TV AS +LP+H+ + A T+ KH G L P GE+R+ V ++ +
Sbjct: 259 WFTVVASNFLPVHVTSLDKADTVYHKHAGHTLLKVPMGGEERMAGFPPLVGEDITLEEGL 318
Query: 492 WDSSSV-DIAAAGLGWFSV--RLKGEAALGVWTYEGVDIVLRNALLPY 536
+S +V DI + GW +V K L +T +G + +R LLP+
Sbjct: 319 GESEAVADIKFSSAGWVAVTPHFKDRLRLRGYTPQGTVLTVRPPLLPH 366
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 8/124 (6%)
Query: 281 LHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKS-VDAGRGGDGE 339
+ +SA +G++ LI + RG+V+ +GA NAGKSTL N + +S +G +
Sbjct: 18 VRLISAKTGFGVEELISALRRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCIAKGAEAI 77
Query: 340 EKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHPNQITTR--LTREEQKLVN 397
+K +S P PGTTL +++ P ++F L + L+++EQ +N
Sbjct: 78 DKATIS-----PWPGTTLNLLKFPICNPTPYRMFKRQKRLKKDAAVAEEDLSQQEQNQLN 132
Query: 398 INKE 401
+ K+
Sbjct: 133 LLKK 136
>gi|239608138|gb|EEQ85125.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
Length = 672
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 189/473 (39%), Gaps = 129/473 (27%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESE----FSNSLKKGGLVV-- 137
CPGCG Q +P GY+ S N K K ++ + +SE + +++ G +V
Sbjct: 88 CPGCGAFTQWVSPDEAGYY---SIN-RKAVKEYIRRFSPDSEEGASAAENIQNGSNIVEI 143
Query: 138 -----FEAENETSEVKKHE--------KPVVCARCHALRHYGKVKDVT------VENLLP 178
E ++ + HE K C RCH L ++G + +E+++
Sbjct: 144 VDDAPAEGKSAVPSAQPHEDTTPPNDIKVPFCDRCHGLINHGIASPIPYPPISYIEDIIA 203
Query: 179 DFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAE---ENERA--WK 233
+ + H + V ++DAADF S +++++ D A+ +N RA +
Sbjct: 204 ESPYKH-------------NHVYHIIDAADFPMSLIPNISRIL-DLAKLRTQNRRAKNIQ 249
Query: 234 EGKSGNVPRVVLVVTKIDLLPSSLSPTRFEH---WVRQRAREDGISK-----ITKLHFVS 285
G G P + ++T+ DLL S +H +V RE SK + +H VS
Sbjct: 250 YGGGGRKPVLSFIITRSDLLGSQKE--FVDHLMTYVLNVMRESLGSKGENVRLGNVHMVS 307
Query: 286 AVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAI----------AKSVDAGRG 335
A + W K + D + + + G VW +G N GKS+LL + +K +G+
Sbjct: 308 AHRGWWTKEIKDKIWE---EGGGVWMVGKTNVGKSSLLQVVFPKSPKTLPPSKLRASGKF 364
Query: 336 GDGEEKN---------IVSHLTEAPVPG---------------------------TTLGI 359
D + N V H ++ P+PG T I
Sbjct: 365 EDSLQPNSRIWSSTDPSVDH-SDLPLPGELKDPDPKQNKEVNEEVDVLLPPAQKVTQYPI 423
Query: 360 VRVEGVLPA-------------QAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRT 406
+ LP + ++ D PGL + + + + + + K LKP
Sbjct: 424 FPIVSSLPGTTASPIRIPFGKKRGEVIDLPGLSR-GGLQEFVKDDHKADLIMKKRLKPER 482
Query: 407 YRIKAGHSIHI-AGLMRMDVEESSVESIYVTVWASPYLPL--HMGKTENACTM 456
I+ S+ + GL+R+ + V++ + V A+P++P+ H+ TE A M
Sbjct: 483 LTIRPKQSLVLGGGLIRI----TPVDADNIVVLAAPFVPIQPHVTSTEKAILM 531
>gi|261203659|ref|XP_002629043.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
gi|239586828|gb|EEQ69471.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
Length = 672
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 189/473 (39%), Gaps = 129/473 (27%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESE----FSNSLKKGGLVV-- 137
CPGCG Q +P GY+ S N K K ++ + +SE + +++ G +V
Sbjct: 88 CPGCGAFTQWVSPDEAGYY---SIN-RKAVKEYIRRFSPDSEEGASAAENIQNGSNIVEI 143
Query: 138 -----FEAENETSEVKKHE--------KPVVCARCHALRHYGKVKDVT------VENLLP 178
E ++ + HE K C RCH L ++G + +E+++
Sbjct: 144 VDDAPAEGKSAVPSAQPHEDTTPPNDIKVPFCDRCHGLINHGIASPIPYPPISYIEDIIA 203
Query: 179 DFDFDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAE---ENERA--WK 233
+ + H + V ++DAADF S +++++ D A+ +N RA +
Sbjct: 204 ESPYKH-------------NHVYHIIDAADFPMSLIPNISRIL-DLAKLRTQNRRAKNIQ 249
Query: 234 EGKSGNVPRVVLVVTKIDLLPSSLSPTRFEH---WVRQRAREDGISK-----ITKLHFVS 285
G G P + ++T+ DLL S +H +V RE SK + +H VS
Sbjct: 250 YGGGGRKPVLSFIITRSDLLGSQKE--FVDHLMTYVLNVMRESLGSKGENVRLGNVHMVS 307
Query: 286 AVKNWGLKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAI----------AKSVDAGRG 335
A + W K + D + + + G VW +G N GKS+LL + +K +G+
Sbjct: 308 AHRGWWTKEIKDKIWE---EGGGVWMVGKTNVGKSSLLQVVFPKSPKTLPPSKLRASGKF 364
Query: 336 GDGEEKN---------IVSHLTEAPVPG---------------------------TTLGI 359
D + N V H ++ P+PG T I
Sbjct: 365 EDSLQPNRRIWSSTDPSVDH-SDLPLPGELKDPDPKQNKEVNEEVDVLLPPAQKVTQYPI 423
Query: 360 VRVEGVLPA-------------QAKLFDTPGLLHPNQITTRLTREEQKLVNINKELKPRT 406
+ LP + ++ D PGL + + + + + + K LKP
Sbjct: 424 FPIVSSLPGTTASPIRIPFGKKRGEVIDLPGLSR-GGLQEFVKDDHKADLIMKKRLKPER 482
Query: 407 YRIKAGHSIHI-AGLMRMDVEESSVESIYVTVWASPYLPL--HMGKTENACTM 456
I+ S+ + GL+R+ + V++ + V A+P++P+ H+ TE A M
Sbjct: 483 LTIRPKQSLVLGGGLIRI----TPVDADNIVVLAAPFVPIQPHVTSTEKAILM 531
>gi|321475687|gb|EFX86649.1| hypothetical protein DAPPUDRAFT_313052 [Daphnia pulex]
Length = 710
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 74/139 (53%), Gaps = 3/139 (2%)
Query: 373 FDTPGLLHPNQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVES 432
FDTPG ++P+QI T LT EE K +KPRT IK G + +AGL R+D + S
Sbjct: 521 FDTPGTINPSQILTLLTLEELMRTLPKKLIKPRTVLIKPGMTYFLAGLGRIDYVDGP-HS 579
Query: 433 IYVTVWASPYLPLHMGKTENACTMVEKHFGRQ-LQPPIG-EKRVEELGKWVRKEFHVSGS 490
+ +T AS LPL + ++A M + G L P G EKR++ K+ V+G
Sbjct: 580 LLLTTLASSDLPLTLIDHQDADQMYAELLGSPILAVPFGSEKRLKHWPGLSGKDITVTGV 639
Query: 491 SWDSSSVDIAAAGLGWFSV 509
W S+VDI + GW +V
Sbjct: 640 GWKESAVDIVLSSAGWVAV 658
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 141/360 (39%), Gaps = 82/360 (22%)
Query: 66 LALTRDGNYDEATPKLTV----CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVA 121
L L+ + NY P + V C GCG + +P PGY PS+ + + L
Sbjct: 185 LHLSDELNYGTPNPDIPVSIIPCGGCGAKLHCQSPSIPGYL--PSEIFSSFQTHDL---- 238
Query: 122 NESEFSNSLKKGGLVVFEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFD 181
+ +C RC LR + +V N+ P+
Sbjct: 239 ------------------------------RGQICQRCRFLRDHDVALNV---NISPE-- 263
Query: 182 FDHTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVP 241
+ + ++V++VVD DF S + ++ G
Sbjct: 264 ---EYPKVISVIRDQVAMVILVVDLLDFPCSIWPGLLDII----------------GTKR 304
Query: 242 RVVLVVTKIDLLPSSLSPTRFEHWVRQRARE---DGISK--ITKLHFVSAVKNWGLKSLI 296
V +V K+DL+P S H + E GI++ I + +SA +G++ LI
Sbjct: 305 PVCVVGNKVDLIPKD-SRGYLNHIQKCLVNELENSGINRANIKLVSLISATTGFGVEQLI 363
Query: 297 DDVVDLAGKRGNVWAIGAQNAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTT 356
+ + G RG+V+ +G N GKS+L NA+ S D + + +++ T + PGTT
Sbjct: 364 TKIQNSWGARGDVYLLGCTNVGKSSLFNALISS-DFCK---TQASDLLERATVSAWPGTT 419
Query: 357 LGIVRVEGVLPAQAKLFDTPGLLHPNQI---TTRLTREEQKLVNINKELKPRTYRIKAGH 413
L +++ + P+ +L++ L + T R+EQ KE + R + GH
Sbjct: 420 LNLLKFPMLRPSSIRLYERTLRLKAESLSHATEERMRKEQL-----KETRNREFATLIGH 474
>gi|85079014|ref|XP_956273.1| hypothetical protein NCU01651 [Neurospora crassa OR74A]
gi|9368948|emb|CAB99178.1| conserved hypothetical protein [Neurospora crassa]
gi|28917329|gb|EAA27037.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 782
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 115/511 (22%), Positives = 196/511 (38%), Gaps = 105/511 (20%)
Query: 84 CPGCGVLMQDTNPKHPGYF------IRPSQNLNKVRKSHLVHVAN---ESEFSN----SL 130
C GCG L Q T P+ GYF ++ L + K ++ ++ E N L
Sbjct: 95 CTGCGALSQTTVPEQAGYFDLSRKAVKEYLGLIEPEKRKVIRSSDRVIEDVLKNIDMEDL 154
Query: 131 KKGGLVV-------FEAENETSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFD 183
++ G+ + ++ + E + P +C RCH L H+ K + P D
Sbjct: 155 ERRGVDLKSLLPRDYQTNKTSPEPEAPPHPPLCDRCHELIHHRKGNSI----FHPGID-- 208
Query: 184 HTVGRKLMSASGARSVVLMVVDAADFDGSFPRKVAKMVSDTA--EENERA----WKEGKS 237
++ + + + V VVDAADF S K+ ++V N RA W G+
Sbjct: 209 -SLRATIEESPYKYNHVYHVVDAADFPMSLIPKLERLVGTLPIRSRNRRAKSETWHAGRQ 267
Query: 238 GNVPRVVLVVTKIDLLP------SSLSPTRFEHWVRQRAREDGISKITKLHFVSAVKNWG 291
N+ ++T+ DLL L P E + R ++ + VSA +NW
Sbjct: 268 INL---SFIITRSDLLAPKKEQVDRLKPYLVETLRQALGRIGNRVRLGNVVCVSARRNWW 324
Query: 292 LKSLIDDVVDLAGKRGNVWAIGAQNAGKSTLLNAI---------------------AKSV 330
+ L +++ + G W +G N GKS L + I ++
Sbjct: 325 TRELKEEIFEHGGAN---WMVGRVNVGKSRLFHDIFPQGRMNWQENQKLPVLPAFRNNNI 381
Query: 331 DAGRGGDGE---------EKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDTPGLLHP 381
G+ +G+ E N + + +PGTT VRV + +L D PGL
Sbjct: 382 TYGKLDEGDDALLPPAQPETNYPAMPIVSDLPGTTASPVRVP-FGNGKGELIDLPGLSR- 439
Query: 382 NQITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGLMRMDVEESSVESIYVTVWASP 441
+ + E++ + + + P +K G S+ + G +R+ + ++ VT A
Sbjct: 440 GDLELYIKPEKRADLVMKMRVVPEQAVLKPGQSLLVGGFIRI-----TPKTPDVTFLAYS 494
Query: 442 YLPL--HMGKTENACTMVE--------------------KHFGR-QLQPPIGEKRVEELG 478
+ P+ H+ TE A + E KH G L+ + ++R L
Sbjct: 495 FTPIEAHVTGTEKAIAVQELREDRPNVENIALPETAEKIKHAGSFALKYDVTKQRSGPLT 554
Query: 479 KWVRKEFHVSGSSWDSSSVDIAAAGLGWFSV 509
+ F V + S+DI G+GW V
Sbjct: 555 RKNACGFKVDSLPFRVLSIDILIEGVGWVEV 585
>gi|380014450|ref|XP_003691245.1| PREDICTED: nitric oxide-associated protein 1-like [Apis florea]
Length = 419
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 136/347 (39%), Gaps = 91/347 (26%)
Query: 84 CPGCGVLMQDTNPKHPGYFIRPSQNLNKVRKSHLVHVANESEFSNSLKKGGLVVFEAENE 143
C GCG L+ +P+ PGY L +F N+
Sbjct: 151 CGGCGALLHCKDPEIPGYL-------------------------------PLELFSKNND 179
Query: 144 TSEVKKHEKPVVCARCHALRHYGKVKDVTVENLLPDFDFDHTVGRKLMSASGARSVVLMV 203
+ K +C RCH L+ Y +V V + D+ L + ++++
Sbjct: 180 -----EDLKSTICQRCHFLKFYNSALEVKVS--IEDY------PNLLKVIKTKKCAIILI 226
Query: 204 VDAADFDGSFPRKVAKMVSDTAEENERAWKEGKSGNVPR--VVLVVTKIDLLPSSLSPTR 261
+D DF S W + KS P + LV K+DLLP SP
Sbjct: 227 IDLTDFPCSI------------------WPDLKSIMHPFTPIFLVGNKVDLLPRD-SPKF 267
Query: 262 FEHWVRQRARE----DGISK--ITKLHFVSAVKNWGLKSLIDDVVDLAGKRGNVWAIGAQ 315
E+ + A G+ K IT + +SA +G++ LI+ + +G+V+ +G
Sbjct: 268 LENIKQLLANTVVHVTGVKKENITHIQLISAKTGYGIEQLINKLQHKWRYKGDVYLVGCT 327
Query: 316 NAGKSTLLNAIAKSVDAGRGGDGEEKNIVSHLTEAPVPGTTLGIVRVEGVLPAQAKLFDT 375
N GKS+L N + S D + + ++V T + PGTTL +++
Sbjct: 328 NVGKSSLFNTLLNS-DYCK---VQAVDLVQRATVSAWPGTTLNLLKF------------- 370
Query: 376 PGLLHPN--QITTRLTREEQKLVNINKELKPRTYRIKAGHSIHIAGL 420
+L+PN + + R+ R ++ +E K R Y+ K ++ A L
Sbjct: 371 -PILNPNRKKYSLRIQRLIKEKFYRMQESKYRDYKFKETGNMTFATL 416
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.130 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,361,825,907
Number of Sequences: 23463169
Number of extensions: 395625829
Number of successful extensions: 1691965
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 799
Number of HSP's that attempted gapping in prelim test: 1684949
Number of HSP's gapped (non-prelim): 2718
length of query: 601
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 452
effective length of database: 8,863,183,186
effective search space: 4006158800072
effective search space used: 4006158800072
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 80 (35.4 bits)