Query 007512
Match_columns 600
No_of_seqs 416 out of 2888
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 03:36:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007512.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007512hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ygy_A PGDH, D-3-phosphoglycer 100.0 3E-100 1E-104 850.9 61.1 525 56-600 2-528 (529)
2 1sc6_A PGDH, D-3-phosphoglycer 100.0 5.3E-77 1.8E-81 641.8 43.9 392 56-598 2-403 (404)
3 3k5p_A D-3-phosphoglycerate de 100.0 1.3E-70 4.3E-75 590.6 42.1 396 53-598 10-415 (416)
4 4g2n_A D-isomer specific 2-hyd 100.0 1.7E-67 5.9E-72 556.2 38.7 312 56-370 26-345 (345)
5 4e5n_A Thermostable phosphite 100.0 2.3E-66 7.8E-71 545.9 36.3 314 58-372 2-328 (330)
6 4dgs_A Dehydrogenase; structur 100.0 1.8E-65 6.3E-70 539.8 30.6 310 55-370 27-340 (340)
7 3kb6_A D-lactate dehydrogenase 100.0 7.7E-65 2.6E-69 534.9 29.3 274 95-370 39-328 (334)
8 2pi1_A D-lactate dehydrogenase 100.0 3E-64 1E-68 530.4 27.8 311 59-371 1-329 (334)
9 3gg9_A D-3-phosphoglycerate de 100.0 1.8E-63 6.1E-68 527.5 33.9 317 59-379 3-342 (352)
10 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 5E-63 1.7E-67 521.0 35.9 310 56-367 24-334 (335)
11 3hg7_A D-isomer specific 2-hyd 100.0 1.1E-63 3.9E-68 522.9 27.2 311 56-374 3-315 (324)
12 4hy3_A Phosphoglycerate oxidor 100.0 3.4E-63 1.2E-67 526.4 30.9 314 54-371 23-349 (365)
13 2yq5_A D-isomer specific 2-hyd 100.0 3.8E-63 1.3E-67 522.7 29.0 312 58-371 1-333 (343)
14 3jtm_A Formate dehydrogenase, 100.0 7.1E-63 2.4E-67 522.4 31.0 315 55-370 16-341 (351)
15 1wwk_A Phosphoglycerate dehydr 100.0 4.7E-62 1.6E-66 508.7 35.5 305 57-362 2-307 (307)
16 3evt_A Phosphoglycerate dehydr 100.0 2.5E-63 8.7E-68 520.8 24.3 310 58-373 1-314 (324)
17 2ekl_A D-3-phosphoglycerate de 100.0 1.8E-60 6.3E-65 497.9 36.0 305 57-365 4-312 (313)
18 1j4a_A D-LDH, D-lactate dehydr 100.0 1E-60 3.6E-65 503.8 34.0 309 59-370 2-331 (333)
19 1gdh_A D-glycerate dehydrogena 100.0 4.7E-60 1.6E-64 496.3 38.1 306 58-366 1-315 (320)
20 1dxy_A D-2-hydroxyisocaproate 100.0 8.6E-61 2.9E-65 504.3 29.2 311 59-372 1-331 (333)
21 2cuk_A Glycerate dehydrogenase 100.0 9.6E-60 3.3E-64 491.9 34.5 304 59-369 1-310 (311)
22 1xdw_A NAD+-dependent (R)-2-hy 100.0 4.7E-60 1.6E-64 498.4 31.5 309 59-370 1-331 (331)
23 2j6i_A Formate dehydrogenase; 100.0 1.7E-60 5.8E-65 507.5 28.3 310 55-365 14-340 (364)
24 2nac_A NAD-dependent formate d 100.0 8E-60 2.7E-64 505.1 33.3 297 73-370 61-366 (393)
25 2w2k_A D-mandelate dehydrogena 100.0 3E-59 1E-63 495.5 35.4 320 57-377 2-345 (348)
26 3ba1_A HPPR, hydroxyphenylpyru 100.0 3.9E-59 1.3E-63 491.2 34.9 310 55-370 20-333 (333)
27 2d0i_A Dehydrogenase; structur 100.0 2.7E-59 9.1E-64 493.1 33.6 312 58-372 2-320 (333)
28 1mx3_A CTBP1, C-terminal bindi 100.0 1.4E-58 4.7E-63 489.4 34.5 311 55-366 18-339 (347)
29 2dbq_A Glyoxylate reductase; D 100.0 3.8E-58 1.3E-62 484.6 36.0 312 58-371 2-323 (334)
30 2gcg_A Glyoxylate reductase/hy 100.0 9.5E-58 3.2E-62 480.9 35.4 316 55-370 5-329 (330)
31 3pp8_A Glyoxylate/hydroxypyruv 100.0 1E-58 3.6E-63 484.3 27.3 297 57-371 2-311 (315)
32 1qp8_A Formate dehydrogenase; 100.0 3.8E-57 1.3E-61 470.5 28.4 295 59-372 1-298 (303)
33 3oet_A Erythronate-4-phosphate 100.0 1E-55 3.5E-60 470.1 28.1 279 57-365 2-286 (381)
34 3gvx_A Glycerate dehydrogenase 100.0 6E-55 2.1E-59 450.5 22.3 277 60-364 2-284 (290)
35 2o4c_A Erythronate-4-phosphate 100.0 6.9E-53 2.4E-57 449.2 28.6 280 59-366 1-284 (380)
36 1v8b_A Adenosylhomocysteinase; 100.0 1.2E-37 4E-42 339.9 0.1 271 120-418 192-473 (479)
37 3d64_A Adenosylhomocysteinase; 100.0 6.5E-38 2.2E-42 343.0 -3.6 271 120-419 212-489 (494)
38 3d4o_A Dipicolinate synthase s 100.0 5.4E-28 1.9E-32 249.9 15.1 207 55-291 2-248 (293)
39 2rir_A Dipicolinate synthase, 99.9 1.4E-25 4.8E-30 232.5 13.7 211 55-291 4-250 (300)
40 3ce6_A Adenosylhomocysteinase; 99.9 2.7E-27 9.3E-32 259.8 -0.3 271 121-418 210-488 (494)
41 2vhw_A Alanine dehydrogenase; 99.9 2.3E-22 7.9E-27 215.0 20.5 245 67-343 18-307 (377)
42 2eez_A Alanine dehydrogenase; 99.8 1.8E-18 6.1E-23 184.3 15.4 276 67-370 18-341 (369)
43 1x13_A NAD(P) transhydrogenase 99.8 4.1E-18 1.4E-22 183.5 14.2 220 67-294 25-301 (401)
44 1gtm_A Glutamate dehydrogenase 99.7 2.2E-19 7.5E-24 193.7 3.7 155 191-360 205-385 (419)
45 3ggo_A Prephenate dehydrogenas 99.7 8.8E-19 3E-23 182.8 4.7 249 194-458 30-299 (314)
46 1l7d_A Nicotinamide nucleotide 99.7 4.9E-17 1.7E-21 174.1 17.3 221 67-292 18-301 (384)
47 3h9u_A Adenosylhomocysteinase; 99.7 3.7E-17 1.3E-21 175.7 14.7 211 70-299 83-311 (436)
48 3ktd_A Prephenate dehydrogenas 99.7 1.5E-18 5.2E-23 182.8 -2.5 256 197-462 8-281 (341)
49 3n58_A Adenosylhomocysteinase; 99.7 2E-16 6.8E-21 169.8 12.5 159 122-298 184-346 (464)
50 1gpj_A Glutamyl-tRNA reductase 99.6 3.1E-17 1.1E-21 176.7 -0.8 210 120-363 80-325 (404)
51 3gvp_A Adenosylhomocysteinase 99.6 3.5E-15 1.2E-19 160.0 12.8 159 121-297 156-318 (435)
52 2g5c_A Prephenate dehydrogenas 99.5 2E-15 6.9E-20 153.9 5.5 237 198-450 2-259 (281)
53 3b1f_A Putative prephenate deh 99.4 1.9E-14 6.6E-19 147.3 0.9 237 198-450 7-267 (290)
54 2pv7_A T-protein [includes: ch 99.4 2E-14 7E-19 148.4 -0.0 237 174-451 3-256 (298)
55 2f1k_A Prephenate dehydrogenas 99.3 4.2E-12 1.4E-16 129.0 6.5 223 198-438 1-243 (279)
56 3p2y_A Alanine dehydrogenase/p 99.2 3E-10 1E-14 120.6 20.2 215 67-292 40-309 (381)
57 4dll_A 2-hydroxy-3-oxopropiona 99.2 1.8E-11 6.2E-16 127.5 9.1 131 176-306 5-143 (320)
58 3obb_A Probable 3-hydroxyisobu 99.2 2.1E-11 7.4E-16 126.1 9.2 114 198-313 4-121 (300)
59 3l6d_A Putative oxidoreductase 99.2 1.8E-11 6E-16 126.8 7.6 114 193-306 5-120 (306)
60 4ezb_A Uncharacterized conserv 99.2 6.6E-11 2.3E-15 123.2 11.2 137 176-317 5-151 (317)
61 3doj_A AT3G25530, dehydrogenas 99.2 4.4E-11 1.5E-15 124.0 9.2 115 192-306 16-134 (310)
62 1c1d_A L-phenylalanine dehydro 99.2 1.6E-10 5.4E-15 121.9 13.1 108 192-306 169-279 (355)
63 4gbj_A 6-phosphogluconate dehy 99.2 3.1E-11 1.1E-15 124.7 7.5 113 198-312 6-120 (297)
64 4e12_A Diketoreductase; oxidor 99.1 3.6E-10 1.2E-14 115.6 14.9 130 198-338 5-161 (283)
65 3qsg_A NAD-binding phosphogluc 99.1 1.2E-10 4E-15 121.0 10.6 139 177-317 2-149 (312)
66 4dio_A NAD(P) transhydrogenase 99.1 7.3E-10 2.5E-14 118.5 16.4 214 67-292 43-319 (405)
67 3qha_A Putative oxidoreductase 99.1 9.8E-11 3.3E-15 120.6 9.1 108 197-306 15-124 (296)
68 1np3_A Ketol-acid reductoisome 99.1 1.7E-11 5.9E-16 128.8 3.5 136 193-338 12-155 (338)
69 4e21_A 6-phosphogluconate dehy 99.1 1.7E-10 5.8E-15 122.2 10.8 121 195-317 20-145 (358)
70 3ond_A Adenosylhomocysteinase; 99.1 2.8E-10 9.5E-15 124.1 12.6 152 121-290 201-355 (488)
71 2d5c_A AROE, shikimate 5-dehyd 99.1 4.7E-11 1.6E-15 120.8 5.4 176 86-303 37-220 (263)
72 3pef_A 6-phosphogluconate dehy 99.1 1.3E-10 4.4E-15 118.9 8.5 109 198-306 2-114 (287)
73 3g0o_A 3-hydroxyisobutyrate de 99.1 1.7E-10 5.8E-15 119.1 8.2 111 196-306 6-121 (303)
74 3pdu_A 3-hydroxyisobutyrate de 99.0 2E-10 6.9E-15 117.4 7.7 109 198-306 2-114 (287)
75 2h78_A Hibadh, 3-hydroxyisobut 99.0 3.7E-10 1.3E-14 116.1 8.4 107 198-304 4-114 (302)
76 2hk9_A Shikimate dehydrogenase 99.0 3.3E-10 1.1E-14 115.6 5.9 165 86-288 48-222 (275)
77 2iaf_A Hypothetical protein SD 98.9 5.7E-10 1.9E-14 103.3 5.3 113 386-512 10-145 (151)
78 2dpo_A L-gulonate 3-dehydrogen 98.9 8.4E-09 2.9E-13 107.5 13.2 130 197-337 6-162 (319)
79 1zej_A HBD-9, 3-hydroxyacyl-CO 98.9 5.5E-09 1.9E-13 107.6 11.2 126 196-337 11-146 (293)
80 4gwg_A 6-phosphogluconate dehy 98.9 4.4E-09 1.5E-13 115.4 10.8 120 197-317 4-133 (484)
81 3fr7_A Putative ketol-acid red 98.9 1.2E-09 4.3E-14 118.3 6.3 96 192-290 48-157 (525)
82 1vpd_A Tartronate semialdehyde 98.9 3E-09 1E-13 108.9 8.1 107 198-304 6-116 (299)
83 3dtt_A NADP oxidoreductase; st 98.9 1.4E-09 4.7E-14 108.9 5.1 101 184-287 6-124 (245)
84 1yb4_A Tartronic semialdehyde 98.9 2.9E-09 9.8E-14 108.7 7.5 106 198-304 4-113 (295)
85 2gf2_A Hibadh, 3-hydroxyisobut 98.8 2.8E-09 9.6E-14 108.9 7.1 106 198-303 1-110 (296)
86 2cvz_A Dehydrogenase, 3-hydrox 98.8 3.5E-09 1.2E-13 107.6 7.6 105 198-304 2-107 (289)
87 2yjz_A Metalloreductase steap4 98.3 3.4E-10 1.1E-14 110.4 0.0 94 195-292 17-110 (201)
88 3cky_A 2-hydroxymethyl glutara 98.8 3.2E-09 1.1E-13 108.8 7.2 107 198-304 5-115 (301)
89 3k6j_A Protein F01G10.3, confi 98.8 2.5E-08 8.4E-13 108.6 14.0 166 151-337 12-205 (460)
90 2zyd_A 6-phosphogluconate dehy 98.8 9E-09 3.1E-13 113.1 9.8 112 194-306 12-132 (480)
91 1i36_A Conserved hypothetical 98.8 8.2E-09 2.8E-13 103.7 7.9 101 198-303 1-104 (264)
92 2uyy_A N-PAC protein; long-cha 98.8 8.1E-09 2.8E-13 106.7 8.0 106 198-303 31-140 (316)
93 2p4q_A 6-phosphogluconate dehy 98.8 1.8E-08 6.2E-13 111.1 10.3 107 197-304 10-126 (497)
94 1leh_A Leucine dehydrogenase; 98.7 4.3E-08 1.5E-12 103.9 10.6 106 194-306 170-278 (364)
95 2iz1_A 6-phosphogluconate dehy 98.7 3E-08 1E-12 108.7 9.6 108 198-306 6-122 (474)
96 2pgd_A 6-phosphogluconate dehy 98.7 3.3E-08 1.1E-12 108.7 9.3 108 198-306 3-120 (482)
97 3d1l_A Putative NADP oxidoredu 98.7 1.4E-08 4.7E-13 102.3 5.7 101 191-293 4-108 (266)
98 1pjc_A Protein (L-alanine dehy 98.7 4.2E-07 1.4E-11 96.2 17.3 181 98-288 66-268 (361)
99 3c24_A Putative oxidoreductase 98.7 2.3E-08 7.8E-13 102.0 6.8 91 198-290 12-104 (286)
100 2q3e_A UDP-glucose 6-dehydroge 98.6 6.4E-08 2.2E-12 105.9 9.4 136 198-333 6-181 (467)
101 2vns_A Metalloreductase steap3 98.6 2.4E-08 8.2E-13 97.9 5.1 93 196-292 27-120 (215)
102 1pgj_A 6PGDH, 6-PGDH, 6-phosph 98.6 6.6E-08 2.2E-12 106.2 9.1 108 198-306 2-122 (478)
103 2raf_A Putative dinucleotide-b 98.5 8.7E-08 3E-12 93.6 7.1 81 192-291 14-94 (209)
104 3oj0_A Glutr, glutamyl-tRNA re 98.5 1.3E-07 4.6E-12 86.3 7.8 87 197-289 21-112 (144)
105 3pid_A UDP-glucose 6-dehydroge 98.5 2.1E-07 7.3E-12 100.5 10.6 115 190-306 29-172 (432)
106 1f0y_A HCDH, L-3-hydroxyacyl-C 98.5 1.1E-06 3.7E-11 90.3 14.5 114 198-315 16-161 (302)
107 3gt0_A Pyrroline-5-carboxylate 98.5 1.6E-07 5.4E-12 93.8 6.8 102 198-303 3-111 (247)
108 2izz_A Pyrroline-5-carboxylate 98.4 2E-07 6.9E-12 96.9 7.2 104 196-303 21-132 (322)
109 2ahr_A Putative pyrroline carb 98.4 4.5E-07 1.5E-11 90.8 8.7 99 198-304 4-105 (259)
110 3dfu_A Uncharacterized protein 98.4 5.2E-07 1.8E-11 89.6 8.6 70 197-287 6-75 (232)
111 3mog_A Probable 3-hydroxybutyr 98.4 7.7E-07 2.6E-11 97.8 10.7 128 197-337 5-159 (483)
112 1yqg_A Pyrroline-5-carboxylate 98.4 3.1E-07 1.1E-11 92.0 6.2 99 198-304 1-103 (263)
113 3tri_A Pyrroline-5-carboxylate 98.4 5.8E-07 2E-11 91.7 7.8 109 197-309 3-119 (280)
114 3gg2_A Sugar dehydrogenase, UD 98.3 1E-06 3.6E-11 95.9 9.4 105 198-303 3-138 (450)
115 1zcj_A Peroxisomal bifunctiona 98.3 3E-06 1E-10 92.5 13.0 113 197-314 37-174 (463)
116 2i99_A MU-crystallin homolog; 98.3 1.3E-06 4.5E-11 90.5 9.5 90 196-291 134-230 (312)
117 3p2o_A Bifunctional protein fo 98.3 7.7E-06 2.6E-10 83.3 14.4 156 84-291 71-236 (285)
118 4a7p_A UDP-glucose dehydrogena 98.3 2E-06 6.7E-11 93.5 10.6 105 198-303 9-145 (446)
119 1mv8_A GMD, GDP-mannose 6-dehy 98.3 8.6E-07 2.9E-11 96.1 7.8 105 198-303 1-140 (436)
120 1b0a_A Protein (fold bifunctio 98.3 9.1E-06 3.1E-10 82.8 14.1 158 81-291 68-235 (288)
121 1bg6_A N-(1-D-carboxylethyl)-L 98.2 2.4E-06 8.2E-11 89.2 9.5 89 198-289 5-110 (359)
122 1y7p_A Hypothetical protein AF 98.2 2.5E-06 8.6E-11 82.9 8.0 72 527-598 5-79 (223)
123 1jay_A Coenzyme F420H2:NADP+ o 98.2 1.1E-06 3.6E-11 85.2 5.4 114 198-318 1-136 (212)
124 2rcy_A Pyrroline carboxylate r 98.2 1.3E-06 4.3E-11 87.4 6.0 98 197-304 4-106 (262)
125 1dlj_A UDP-glucose dehydrogena 98.2 5.3E-06 1.8E-10 89.0 11.1 106 198-306 1-136 (402)
126 1txg_A Glycerol-3-phosphate de 98.2 1.9E-06 6.6E-11 89.1 7.3 90 198-290 1-107 (335)
127 2y0c_A BCEC, UDP-glucose dehyd 98.2 3E-06 1E-10 93.0 8.8 104 197-301 8-142 (478)
128 2ew2_A 2-dehydropantoate 2-red 98.2 2E-06 6.9E-11 87.8 6.8 107 198-307 4-127 (316)
129 3k96_A Glycerol-3-phosphate de 98.1 2.7E-06 9.2E-11 89.8 7.4 95 196-292 28-138 (356)
130 4huj_A Uncharacterized protein 98.1 2.2E-06 7.5E-11 84.1 6.2 107 197-307 23-145 (220)
131 3ado_A Lambda-crystallin; L-gu 98.1 1.7E-05 5.8E-10 82.4 12.8 175 197-392 6-209 (319)
132 3ojo_A CAP5O; rossmann fold, c 98.1 7.9E-06 2.7E-10 88.3 10.3 106 195-300 9-142 (431)
133 1wdk_A Fatty oxidation complex 98.1 7.3E-06 2.5E-10 94.2 10.4 114 197-315 314-454 (715)
134 1x0v_A GPD-C, GPDH-C, glycerol 98.1 3.9E-06 1.3E-10 87.8 7.2 92 198-291 9-128 (354)
135 2o3j_A UDP-glucose 6-dehydroge 98.1 5.1E-06 1.7E-10 91.2 8.1 105 198-303 10-151 (481)
136 2wtb_A MFP2, fatty acid multif 98.0 1.8E-05 6E-10 91.1 12.1 113 198-315 313-452 (725)
137 1evy_A Glycerol-3-phosphate de 98.0 1.3E-06 4.4E-11 92.1 2.4 91 199-290 17-127 (366)
138 3g79_A NDP-N-acetyl-D-galactos 98.0 7.6E-06 2.6E-10 89.6 8.5 101 198-298 19-158 (478)
139 3ulk_A Ketol-acid reductoisome 98.0 9.4E-06 3.2E-10 86.7 8.1 93 194-289 34-133 (491)
140 4a26_A Putative C-1-tetrahydro 98.0 1.2E-05 4.1E-10 82.4 8.6 82 191-291 159-243 (300)
141 4a5o_A Bifunctional protein fo 98.0 1.5E-05 5E-10 81.2 9.2 82 191-291 155-237 (286)
142 1yj8_A Glycerol-3-phosphate de 98.0 5.1E-06 1.7E-10 88.0 5.9 90 198-289 22-143 (375)
143 3l07_A Bifunctional protein fo 98.0 1.8E-05 6E-10 80.6 9.6 81 191-290 155-236 (285)
144 1ks9_A KPA reductase;, 2-dehyd 98.0 5.1E-06 1.7E-10 83.8 5.6 90 198-289 1-99 (291)
145 2c2x_A Methylenetetrahydrofola 98.0 1.9E-05 6.7E-10 80.1 9.7 184 83-342 69-264 (281)
146 1z82_A Glycerol-3-phosphate de 98.0 7.7E-06 2.6E-10 85.2 6.6 86 197-289 14-113 (335)
147 3ngx_A Bifunctional protein fo 98.0 1.8E-05 6.2E-10 80.1 9.0 153 83-290 63-225 (276)
148 1a4i_A Methylenetetrahydrofola 98.0 2.4E-05 8.3E-10 80.1 10.0 82 191-291 159-241 (301)
149 2dc1_A L-aspartate dehydrogena 98.0 1.3E-05 4.5E-10 79.3 7.9 95 198-303 1-100 (236)
150 2qyt_A 2-dehydropantoate 2-red 98.0 4E-06 1.4E-10 86.0 4.2 105 198-305 9-134 (317)
151 1y81_A Conserved hypothetical 97.9 1E-05 3.4E-10 73.9 5.7 101 195-306 12-117 (138)
152 1edz_A 5,10-methylenetetrahydr 97.9 8.4E-06 2.9E-10 84.6 5.8 93 191-289 171-277 (320)
153 3c85_A Putative glutathione-re 97.9 5.9E-06 2E-10 78.1 4.2 94 193-288 35-140 (183)
154 3phh_A Shikimate dehydrogenase 97.9 2.3E-05 8E-10 79.5 8.4 93 197-290 118-212 (269)
155 3ghy_A Ketopantoate reductase 97.9 1.2E-05 4.2E-10 83.7 6.2 90 197-289 3-106 (335)
156 3hdj_A Probable ornithine cycl 97.9 5.2E-05 1.8E-09 78.6 10.8 88 197-290 121-216 (313)
157 2egg_A AROE, shikimate 5-dehyd 97.8 5.4E-05 1.9E-09 77.8 10.2 95 193-290 137-243 (297)
158 2ko1_A CTR148A, GTP pyrophosph 97.8 4.3E-05 1.5E-09 63.2 7.7 69 529-599 8-79 (88)
159 2i76_A Hypothetical protein; N 97.8 4E-06 1.4E-10 85.0 1.7 85 198-289 3-91 (276)
160 3don_A Shikimate dehydrogenase 97.8 2.6E-05 9E-10 79.5 7.6 96 193-291 113-214 (277)
161 3i83_A 2-dehydropantoate 2-red 97.8 5.5E-05 1.9E-09 78.3 10.2 107 198-308 3-125 (320)
162 2g1u_A Hypothetical protein TM 97.7 3.5E-05 1.2E-09 70.9 6.2 99 190-290 12-121 (155)
163 3hn2_A 2-dehydropantoate 2-red 97.7 0.0001 3.4E-09 76.0 9.8 106 198-308 3-123 (312)
164 2duw_A Putative COA-binding pr 97.7 1.9E-05 6.7E-10 72.6 3.7 101 197-306 13-118 (145)
165 3fwz_A Inner membrane protein 97.7 3.2E-05 1.1E-09 70.1 5.1 90 197-288 7-106 (140)
166 1x7d_A Ornithine cyclodeaminas 97.7 0.00011 3.8E-09 77.3 9.6 90 196-289 128-228 (350)
167 3u62_A Shikimate dehydrogenase 97.7 6.1E-05 2.1E-09 75.7 7.2 100 195-304 107-214 (253)
168 3hwr_A 2-dehydropantoate 2-red 97.7 6.9E-05 2.3E-09 77.5 7.7 103 195-302 17-134 (318)
169 1lss_A TRK system potassium up 97.6 0.00013 4.4E-09 64.8 7.1 87 197-285 4-101 (140)
170 3ic5_A Putative saccharopine d 97.5 8E-05 2.7E-09 64.2 5.2 87 196-287 4-100 (118)
171 2z2v_A Hypothetical protein PH 97.5 7.2E-05 2.4E-09 79.2 5.3 90 193-288 12-109 (365)
172 1omo_A Alanine dehydrogenase; 97.5 0.00023 7.9E-09 73.9 8.5 87 196-289 124-219 (322)
173 3o8q_A Shikimate 5-dehydrogena 97.4 0.00013 4.3E-09 74.5 6.1 96 192-290 121-224 (281)
174 3llv_A Exopolyphosphatase-rela 97.4 0.00021 7.1E-09 64.3 6.9 65 196-260 5-79 (141)
175 1nyt_A Shikimate 5-dehydrogena 97.4 0.0004 1.4E-08 70.2 9.0 94 193-290 115-217 (271)
176 2qrj_A Saccharopine dehydrogen 97.4 0.00011 3.9E-09 78.0 5.2 83 196-287 213-300 (394)
177 3ego_A Probable 2-dehydropanto 97.4 0.00023 7.8E-09 73.3 6.9 103 198-306 3-117 (307)
178 3c7a_A Octopine dehydrogenase; 97.4 0.00019 6.6E-09 76.4 6.5 87 198-286 3-115 (404)
179 2hmt_A YUAA protein; RCK, KTN, 97.3 0.00012 4E-09 65.4 3.8 68 195-262 4-81 (144)
180 1vl6_A Malate oxidoreductase; 97.3 0.0011 3.8E-08 70.2 11.7 112 191-310 186-316 (388)
181 2f1f_A Acetolactate synthase i 97.3 0.00036 1.2E-08 65.5 6.9 73 526-598 3-77 (164)
182 3pwz_A Shikimate dehydrogenase 97.3 0.00051 1.7E-08 69.7 8.3 96 192-290 115-218 (272)
183 1p77_A Shikimate 5-dehydrogena 97.3 0.00022 7.5E-09 72.2 5.4 71 193-263 115-192 (272)
184 2ewd_A Lactate dehydrogenase,; 97.2 0.0004 1.4E-08 71.8 6.9 101 197-299 4-133 (317)
185 4b4u_A Bifunctional protein fo 97.2 0.00087 3E-08 68.6 9.1 79 191-288 173-252 (303)
186 3vtf_A UDP-glucose 6-dehydroge 97.2 0.0004 1.4E-08 75.2 7.0 135 197-333 21-194 (444)
187 1hyh_A L-hicdh, L-2-hydroxyiso 97.2 0.00043 1.5E-08 71.2 6.7 64 198-262 2-80 (309)
188 1guz_A Malate dehydrogenase; o 97.2 0.00076 2.6E-08 69.5 8.5 63 198-261 1-79 (310)
189 4hkt_A Inositol 2-dehydrogenas 97.2 0.00045 1.5E-08 71.5 6.6 65 198-262 4-74 (331)
190 2pc6_A Probable acetolactate s 97.1 0.00045 1.5E-08 64.8 5.7 73 526-598 4-78 (165)
191 1a5z_A L-lactate dehydrogenase 97.1 0.00088 3E-08 69.3 8.2 65 198-263 1-79 (319)
192 1tlt_A Putative oxidoreductase 97.1 0.0013 4.4E-08 67.6 9.2 102 198-304 6-115 (319)
193 3uuw_A Putative oxidoreductase 97.1 0.00069 2.4E-08 69.3 7.0 65 197-261 6-76 (308)
194 3zwc_A Peroxisomal bifunctiona 97.1 0.0031 1.1E-07 72.5 13.1 174 198-392 317-514 (742)
195 1nvt_A Shikimate 5'-dehydrogen 97.1 0.00049 1.7E-08 70.1 5.9 95 193-290 124-233 (287)
196 1xea_A Oxidoreductase, GFO/IDH 97.1 0.0011 3.6E-08 68.5 8.3 63 198-260 3-72 (323)
197 1pg5_A Aspartate carbamoyltran 97.1 0.0045 1.5E-07 63.5 12.8 126 141-287 113-260 (299)
198 3db2_A Putative NADPH-dependen 97.0 0.00076 2.6E-08 70.5 6.9 65 198-262 6-77 (354)
199 3euw_A MYO-inositol dehydrogen 97.0 0.00069 2.3E-08 70.4 6.5 64 198-261 5-75 (344)
200 3jyo_A Quinate/shikimate dehyd 97.0 0.00075 2.6E-08 68.9 6.5 94 194-290 124-232 (283)
201 1zpv_A ACT domain protein; str 97.0 0.00074 2.5E-08 56.2 5.3 62 527-590 6-70 (91)
202 2glx_A 1,5-anhydro-D-fructose 97.0 0.0011 3.8E-08 68.3 7.8 63 199-261 2-72 (332)
203 3fbt_A Chorismate mutase and s 97.0 0.0014 4.8E-08 66.8 8.4 93 192-290 117-217 (282)
204 3q2i_A Dehydrogenase; rossmann 97.0 0.00067 2.3E-08 70.9 6.1 63 198-260 14-84 (354)
205 3ezy_A Dehydrogenase; structur 97.0 0.00086 2.9E-08 69.7 6.7 64 198-261 3-74 (344)
206 2ho3_A Oxidoreductase, GFO/IDH 97.0 0.0013 4.4E-08 67.8 7.9 63 199-261 3-72 (325)
207 2ef0_A Ornithine carbamoyltran 96.9 0.009 3.1E-07 61.3 13.8 132 142-294 120-271 (301)
208 3e18_A Oxidoreductase; dehydro 96.9 0.00092 3.2E-08 70.1 6.6 64 198-261 6-75 (359)
209 3g17_A Similar to 2-dehydropan 96.9 0.00012 4.1E-09 74.8 -0.4 93 198-292 3-101 (294)
210 1id1_A Putative potassium chan 96.9 0.00082 2.8E-08 61.4 5.2 67 197-263 3-83 (153)
211 3tnl_A Shikimate dehydrogenase 96.9 0.0025 8.5E-08 66.0 9.4 97 192-290 149-266 (315)
212 2i6u_A Otcase, ornithine carba 96.9 0.017 5.7E-07 59.5 15.4 125 142-287 114-265 (307)
213 3e9m_A Oxidoreductase, GFO/IDH 96.9 0.00098 3.4E-08 69.0 6.1 63 198-260 6-76 (330)
214 3bio_A Oxidoreductase, GFO/IDH 96.9 0.0014 4.6E-08 67.4 6.9 98 198-303 10-115 (304)
215 2fgc_A Acetolactate synthase, 96.9 0.0022 7.4E-08 61.5 7.7 73 526-598 29-103 (193)
216 3cea_A MYO-inositol 2-dehydrog 96.8 0.0023 8E-08 66.3 8.6 64 198-261 9-81 (346)
217 2a9f_A Putative malic enzyme ( 96.8 0.0018 6.2E-08 68.7 7.5 122 144-291 156-293 (398)
218 1ldn_A L-lactate dehydrogenase 96.8 0.0011 3.9E-08 68.5 5.6 66 197-262 6-85 (316)
219 2d59_A Hypothetical protein PH 96.8 0.0026 9E-08 58.1 7.4 99 197-306 22-125 (144)
220 1pzg_A LDH, lactate dehydrogen 96.8 0.0027 9.2E-08 66.1 8.4 67 197-263 9-92 (331)
221 2f06_A Conserved hypothetical 96.8 0.0022 7.6E-08 58.2 6.8 58 527-588 73-130 (144)
222 2v6b_A L-LDH, L-lactate dehydr 96.7 0.0017 5.9E-08 66.7 6.6 63 198-261 1-77 (304)
223 1vlv_A Otcase, ornithine carba 96.7 0.016 5.6E-07 60.0 13.9 131 142-293 133-294 (325)
224 1ml4_A Aspartate transcarbamoy 96.7 0.0078 2.7E-07 62.0 11.3 94 194-287 152-268 (308)
225 1pvv_A Otcase, ornithine carba 96.7 0.02 6.7E-07 59.2 14.2 125 142-287 121-271 (315)
226 3r7f_A Aspartate carbamoyltran 96.7 0.0075 2.6E-07 61.9 11.0 124 141-287 111-250 (304)
227 3mz0_A Inositol 2-dehydrogenas 96.7 0.002 6.8E-08 67.0 6.7 63 198-260 3-75 (344)
228 3evn_A Oxidoreductase, GFO/IDH 96.7 0.0017 5.7E-08 67.2 6.0 64 198-261 6-77 (329)
229 1dxh_A Ornithine carbamoyltran 96.7 0.013 4.4E-07 61.0 12.4 127 141-287 119-274 (335)
230 1iuk_A Hypothetical protein TT 96.7 0.003 1E-07 57.4 6.9 100 196-304 12-116 (140)
231 3rc1_A Sugar 3-ketoreductase; 96.6 0.0016 5.4E-08 68.1 5.5 65 196-260 26-98 (350)
232 4a7p_A UDP-glucose dehydrogena 96.6 0.004 1.4E-07 67.5 8.7 101 192-297 317-430 (446)
233 1t2d_A LDH-P, L-lactate dehydr 96.6 0.0037 1.3E-07 64.8 8.1 62 198-260 5-81 (322)
234 2hjr_A Malate dehydrogenase; m 96.6 0.0049 1.7E-07 64.0 8.9 63 197-260 14-91 (328)
235 3dfz_A SIRC, precorrin-2 dehyd 96.6 0.0037 1.3E-07 61.5 7.4 90 192-287 26-121 (223)
236 3c1a_A Putative oxidoreductase 96.6 0.001 3.5E-08 68.3 3.5 62 198-261 11-79 (315)
237 3csu_A Protein (aspartate carb 96.6 0.015 5E-07 60.0 12.1 123 144-287 121-267 (310)
238 3ec7_A Putative dehydrogenase; 96.6 0.0031 1.1E-07 66.0 7.2 64 197-260 23-96 (357)
239 1duv_G Octase-1, ornithine tra 96.5 0.014 4.7E-07 60.8 11.6 127 142-287 119-274 (333)
240 1jw9_B Molybdopterin biosynthe 96.5 0.0016 5.4E-08 65.1 4.3 97 176-275 12-144 (249)
241 4amu_A Ornithine carbamoyltran 96.5 0.015 5.2E-07 61.1 11.9 127 140-287 144-300 (365)
242 1f06_A MESO-diaminopimelate D- 96.5 0.0032 1.1E-07 65.1 6.7 99 198-303 4-108 (320)
243 4f2g_A Otcase 1, ornithine car 96.5 0.016 5.6E-07 59.6 11.8 126 141-287 119-264 (309)
244 3t4e_A Quinate/shikimate dehyd 96.5 0.0036 1.2E-07 64.7 7.0 98 192-290 143-260 (312)
245 3l4b_C TRKA K+ channel protien 96.5 0.0023 7.9E-08 61.9 5.2 66 198-263 1-77 (218)
246 3q2o_A Phosphoribosylaminoimid 96.5 0.0025 8.4E-08 67.4 5.7 65 193-257 10-81 (389)
247 3ohs_X Trans-1,2-dihydrobenzen 96.4 0.0033 1.1E-07 65.0 6.5 63 198-260 3-75 (334)
248 4a8t_A Putrescine carbamoyltra 96.4 0.04 1.4E-06 57.4 14.5 130 139-287 135-292 (339)
249 3pqe_A L-LDH, L-lactate dehydr 96.4 0.0058 2E-07 63.5 8.2 94 197-293 5-126 (326)
250 4had_A Probable oxidoreductase 96.4 0.0038 1.3E-07 64.8 6.7 62 199-260 25-95 (350)
251 1b7g_O Protein (glyceraldehyde 96.4 0.0047 1.6E-07 64.6 7.4 84 199-287 3-108 (340)
252 1j5p_A Aspartate dehydrogenase 96.4 0.0033 1.1E-07 62.9 5.9 96 196-304 11-111 (253)
253 3l9w_A Glutathione-regulated p 96.4 0.002 6.7E-08 69.3 4.5 91 197-289 4-104 (413)
254 1yqd_A Sinapyl alcohol dehydro 96.4 0.0047 1.6E-07 64.8 7.2 88 196-288 187-283 (366)
255 1oth_A Protein (ornithine tran 96.4 0.03 1E-06 57.9 13.1 126 141-287 120-271 (321)
256 1ydw_A AX110P-like protein; st 96.4 0.0091 3.1E-07 62.4 9.3 103 198-305 7-122 (362)
257 1lld_A L-lactate dehydrogenase 96.3 0.0088 3E-07 61.2 8.6 93 197-290 7-127 (319)
258 2aef_A Calcium-gated potassium 96.3 0.0032 1.1E-07 61.5 5.1 85 197-285 9-103 (234)
259 3gg2_A Sugar dehydrogenase, UD 96.3 0.0089 3.1E-07 64.8 9.0 95 192-290 313-421 (450)
260 3grf_A Ornithine carbamoyltran 96.3 0.038 1.3E-06 57.3 13.3 134 140-287 118-283 (328)
261 4ep1_A Otcase, ornithine carba 96.3 0.042 1.4E-06 57.2 13.6 128 139-287 142-294 (340)
262 4fgw_A Glycerol-3-phosphate de 96.3 0.0046 1.6E-07 65.8 6.4 89 199-289 36-153 (391)
263 3nep_X Malate dehydrogenase; h 96.3 0.0061 2.1E-07 63.0 7.1 94 198-294 1-123 (314)
264 4a8p_A Putrescine carbamoyltra 96.3 0.048 1.6E-06 57.1 13.9 128 141-287 115-270 (355)
265 2dvm_A Malic enzyme, 439AA lon 96.2 0.0068 2.3E-07 65.4 7.6 94 192-288 181-297 (439)
266 4fb5_A Probable oxidoreductase 96.2 0.0054 1.9E-07 64.1 6.7 63 198-260 26-103 (393)
267 3p7m_A Malate dehydrogenase; p 96.2 0.01 3.5E-07 61.5 8.7 95 196-293 4-126 (321)
268 3fef_A Putative glucosidase LP 96.2 0.0065 2.2E-07 65.8 7.3 112 196-308 4-167 (450)
269 3m2t_A Probable dehydrogenase; 96.2 0.0045 1.5E-07 64.9 5.8 63 198-260 6-77 (359)
270 3two_A Mannitol dehydrogenase; 96.2 0.01 3.4E-07 61.6 8.3 88 196-288 176-266 (348)
271 3e82_A Putative oxidoreductase 96.1 0.006 2.1E-07 64.0 6.5 63 198-261 8-77 (364)
272 3tpf_A Otcase, ornithine carba 96.1 0.068 2.3E-06 54.9 14.0 132 141-293 110-271 (307)
273 2w37_A Ornithine carbamoyltran 96.1 0.037 1.3E-06 58.0 12.1 128 140-288 140-296 (359)
274 1xyg_A Putative N-acetyl-gamma 96.1 0.01 3.4E-07 62.5 8.0 85 197-288 16-113 (359)
275 3vku_A L-LDH, L-lactate dehydr 96.1 0.0062 2.1E-07 63.3 6.3 96 196-293 8-129 (326)
276 1y6j_A L-lactate dehydrogenase 96.1 0.011 3.6E-07 61.2 7.9 110 197-309 7-147 (318)
277 1h6d_A Precursor form of gluco 96.1 0.0059 2E-07 65.8 6.1 64 198-261 84-160 (433)
278 1ur5_A Malate dehydrogenase; o 96.1 0.017 6E-07 59.3 9.4 63 198-261 3-80 (309)
279 3gd5_A Otcase, ornithine carba 96.1 0.055 1.9E-06 55.9 13.0 125 142-287 123-273 (323)
280 2axq_A Saccharopine dehydrogen 96.1 0.0055 1.9E-07 66.8 5.8 93 190-287 16-119 (467)
281 2q3e_A UDP-glucose 6-dehydroge 96.0 0.017 5.9E-07 62.8 9.7 93 194-289 326-444 (467)
282 1npy_A Hypothetical shikimate 96.0 0.015 5E-07 58.9 8.1 65 196-262 118-186 (271)
283 3i23_A Oxidoreductase, GFO/IDH 96.0 0.01 3.5E-07 61.8 7.1 63 198-260 3-74 (349)
284 3d6n_B Aspartate carbamoyltran 95.9 0.037 1.3E-06 56.4 10.9 99 140-261 109-214 (291)
285 3kux_A Putative oxidoreductase 95.9 0.0065 2.2E-07 63.3 5.5 65 198-262 8-78 (352)
286 3tl2_A Malate dehydrogenase; c 95.9 0.012 4.2E-07 60.8 7.4 95 196-293 7-131 (315)
287 1piw_A Hypothetical zinc-type 95.9 0.012 4.3E-07 61.3 7.6 89 196-288 179-277 (360)
288 3gdo_A Uncharacterized oxidore 95.9 0.007 2.4E-07 63.3 5.5 64 198-262 6-76 (358)
289 3moi_A Probable dehydrogenase; 95.9 0.0065 2.2E-07 64.3 5.2 64 198-261 3-74 (387)
290 2p2s_A Putative oxidoreductase 95.9 0.019 6.4E-07 59.2 8.6 64 198-261 5-76 (336)
291 3qy9_A DHPR, dihydrodipicolina 95.9 0.021 7.2E-07 56.8 8.6 80 198-289 4-85 (243)
292 2czc_A Glyceraldehyde-3-phosph 95.8 0.013 4.3E-07 61.1 7.2 65 198-262 3-90 (334)
293 1js1_X Transcarbamylase; alpha 95.8 0.086 3E-06 54.5 13.3 127 139-287 130-275 (324)
294 4gqa_A NAD binding oxidoreduct 95.8 0.007 2.4E-07 64.4 5.1 63 199-261 28-106 (412)
295 2vt3_A REX, redox-sensing tran 95.8 0.0047 1.6E-07 60.4 3.4 64 198-261 86-155 (215)
296 3ojo_A CAP5O; rossmann fold, c 95.8 0.029 9.9E-07 60.4 9.9 87 194-290 312-409 (431)
297 2nu8_A Succinyl-COA ligase [AD 95.7 0.015 5E-07 59.3 7.1 102 197-304 7-114 (288)
298 3lk7_A UDP-N-acetylmuramoylala 95.7 0.0087 3E-07 64.7 5.7 110 194-303 6-136 (451)
299 3ldh_A Lactate dehydrogenase; 95.7 0.0085 2.9E-07 62.3 5.3 91 196-287 20-138 (330)
300 2cdc_A Glucose dehydrogenase g 95.7 0.0071 2.4E-07 63.3 4.6 91 194-288 178-279 (366)
301 2i6t_A Ubiquitin-conjugating e 95.7 0.0095 3.2E-07 61.2 5.4 63 197-260 14-86 (303)
302 1oju_A MDH, malate dehydrogena 95.7 0.014 4.9E-07 59.6 6.7 94 198-295 1-124 (294)
303 3g79_A NDP-N-acetyl-D-galactos 95.7 0.017 5.8E-07 63.1 7.6 98 192-297 348-458 (478)
304 3fhl_A Putative oxidoreductase 95.7 0.0082 2.8E-07 62.8 5.0 62 198-260 6-74 (362)
305 3lou_A Formyltetrahydrofolate 95.7 0.013 4.4E-07 60.0 6.2 53 525-577 9-61 (292)
306 3f4l_A Putative oxidoreductase 95.6 0.0095 3.2E-07 61.9 5.3 64 198-261 3-75 (345)
307 4fcc_A Glutamate dehydrogenase 95.6 0.052 1.8E-06 58.5 11.1 95 192-291 230-354 (450)
308 3d0o_A L-LDH 1, L-lactate dehy 95.6 0.016 5.3E-07 59.9 6.9 94 197-293 6-127 (317)
309 4ekn_B Aspartate carbamoyltran 95.6 0.092 3.1E-06 53.9 12.5 98 140-258 114-225 (306)
310 3gvi_A Malate dehydrogenase; N 95.6 0.025 8.7E-07 58.6 8.3 92 195-288 5-125 (324)
311 3o9z_A Lipopolysaccaride biosy 95.6 0.018 6.1E-07 59.1 7.1 63 198-260 4-81 (312)
312 3sds_A Ornithine carbamoyltran 95.6 0.1 3.5E-06 54.6 12.7 138 139-287 138-308 (353)
313 2ozp_A N-acetyl-gamma-glutamyl 95.6 0.015 5.3E-07 60.7 6.6 85 198-288 5-100 (345)
314 4h31_A Otcase, ornithine carba 95.6 0.13 4.6E-06 53.9 13.7 130 139-287 142-300 (358)
315 1ez4_A Lactate dehydrogenase; 95.5 0.015 5.1E-07 60.1 6.3 93 198-293 6-125 (318)
316 3dty_A Oxidoreductase, GFO/IDH 95.5 0.011 3.8E-07 62.7 5.5 64 197-260 12-94 (398)
317 2zqz_A L-LDH, L-lactate dehydr 95.5 0.015 5.1E-07 60.4 6.2 94 197-293 9-129 (326)
318 1uuf_A YAHK, zinc-type alcohol 95.5 0.018 6.1E-07 60.5 6.9 88 196-288 194-289 (369)
319 3orq_A N5-carboxyaminoimidazol 95.5 0.012 4E-07 62.1 5.5 63 194-257 9-79 (377)
320 3oa2_A WBPB; oxidoreductase, s 95.5 0.019 6.4E-07 59.1 6.9 63 198-260 4-82 (318)
321 3abi_A Putative uncharacterize 95.5 0.013 4.4E-07 61.5 5.7 69 193-262 12-88 (365)
322 3e8x_A Putative NAD-dependent 95.5 0.024 8.2E-07 54.9 7.2 71 192-262 16-95 (236)
323 1cdo_A Alcohol dehydrogenase; 95.5 0.034 1.2E-06 58.2 8.8 88 196-288 192-295 (374)
324 3tum_A Shikimate dehydrogenase 95.4 0.031 1.1E-06 56.4 8.1 97 192-288 120-226 (269)
325 3aog_A Glutamate dehydrogenase 95.4 0.12 4E-06 55.7 13.0 107 192-306 230-357 (440)
326 4h3v_A Oxidoreductase domain p 95.4 0.0094 3.2E-07 62.2 4.5 63 198-260 7-84 (390)
327 1zh8_A Oxidoreductase; TM0312, 95.4 0.015 5.2E-07 60.2 6.0 63 198-260 19-91 (340)
328 3obi_A Formyltetrahydrofolate 95.4 0.0092 3.1E-07 60.9 4.1 52 525-576 5-56 (288)
329 1ys4_A Aspartate-semialdehyde 95.4 0.014 4.7E-07 61.3 5.6 86 198-288 9-115 (354)
330 2nqt_A N-acetyl-gamma-glutamyl 95.4 0.017 6E-07 60.5 6.1 95 198-299 10-122 (352)
331 2jhf_A Alcohol dehydrogenase E 95.4 0.036 1.2E-06 58.0 8.6 87 196-287 191-293 (374)
332 4gmf_A Yersiniabactin biosynth 95.4 0.014 4.7E-07 61.7 5.4 64 197-261 7-76 (372)
333 1zq6_A Otcase, ornithine carba 95.3 0.27 9.2E-06 51.5 15.0 128 138-287 151-315 (359)
334 1rjw_A ADH-HT, alcohol dehydro 95.3 0.017 5.8E-07 59.7 5.9 88 196-288 164-262 (339)
335 2y0c_A BCEC, UDP-glucose dehyd 95.3 0.042 1.4E-06 60.0 9.2 101 192-297 323-447 (478)
336 1cf2_P Protein (glyceraldehyde 95.3 0.013 4.3E-07 61.2 4.8 64 199-262 3-89 (337)
337 2dt5_A AT-rich DNA-binding pro 95.3 0.0085 2.9E-07 58.4 3.3 63 198-261 81-150 (211)
338 1p0f_A NADP-dependent alcohol 95.3 0.035 1.2E-06 58.1 8.1 87 196-287 191-293 (373)
339 2d8a_A PH0655, probable L-thre 95.3 0.013 4.4E-07 60.8 4.7 87 196-287 167-267 (348)
340 3eag_A UDP-N-acetylmuramate:L- 95.3 0.032 1.1E-06 57.7 7.6 62 197-258 4-73 (326)
341 1e3i_A Alcohol dehydrogenase, 95.2 0.043 1.5E-06 57.4 8.8 88 196-288 195-298 (376)
342 1zud_1 Adenylyltransferase THI 95.2 0.015 5E-07 58.1 4.8 97 176-275 9-141 (251)
343 3v5n_A Oxidoreductase; structu 95.2 0.017 5.9E-07 61.7 5.7 65 198-262 38-121 (417)
344 3u3x_A Oxidoreductase; structu 95.2 0.023 7.8E-07 59.5 6.4 64 197-260 26-97 (361)
345 3ew7_A LMO0794 protein; Q8Y8U8 95.2 0.043 1.5E-06 51.9 7.9 65 198-262 1-72 (221)
346 3n0v_A Formyltetrahydrofolate 95.2 0.028 9.5E-07 57.3 6.8 53 525-577 7-59 (286)
347 2nvw_A Galactose/lactose metab 95.2 0.021 7.1E-07 62.4 6.3 63 198-260 40-117 (479)
348 3do5_A HOM, homoserine dehydro 95.1 0.055 1.9E-06 56.1 9.0 106 199-305 4-134 (327)
349 4ew6_A D-galactose-1-dehydroge 95.1 0.023 7.7E-07 58.8 6.1 59 197-260 25-90 (330)
350 2o3j_A UDP-glucose 6-dehydroge 95.1 0.06 2E-06 58.7 9.6 101 194-298 332-456 (481)
351 3btv_A Galactose/lactose metab 95.1 0.015 5E-07 62.7 4.7 63 198-260 21-98 (438)
352 1lc0_A Biliverdin reductase A; 95.1 0.014 4.9E-07 59.3 4.4 61 198-261 8-75 (294)
353 1ff9_A Saccharopine reductase; 95.1 0.018 6.3E-07 62.3 5.5 67 196-262 2-79 (450)
354 2fzw_A Alcohol dehydrogenase c 95.1 0.041 1.4E-06 57.5 8.0 87 196-287 190-292 (373)
355 2tmg_A Protein (glutamate dehy 95.1 0.37 1.2E-05 51.5 15.4 95 191-291 203-319 (415)
356 2ixa_A Alpha-N-acetylgalactosa 95.1 0.03 1E-06 60.3 7.0 64 198-261 21-101 (444)
357 2cf5_A Atccad5, CAD, cinnamyl 95.1 0.025 8.7E-07 58.9 6.3 88 196-288 180-276 (357)
358 3s2e_A Zinc-containing alcohol 95.0 0.02 6.9E-07 59.1 5.4 87 196-287 166-263 (340)
359 1u8f_O GAPDH, glyceraldehyde-3 95.0 0.025 8.5E-07 58.9 6.1 87 198-289 4-124 (335)
360 3o1l_A Formyltetrahydrofolate 95.0 0.014 4.9E-07 59.9 4.1 51 527-577 23-73 (302)
361 1pjq_A CYSG, siroheme synthase 95.0 0.022 7.6E-07 61.8 5.8 68 192-259 7-80 (457)
362 1nvm_B Acetaldehyde dehydrogen 94.9 0.037 1.3E-06 57.0 7.0 63 198-260 5-80 (312)
363 2nyi_A Unknown protein; protei 94.9 0.018 6.2E-07 55.1 4.2 51 526-576 93-147 (195)
364 4ej6_A Putative zinc-binding d 94.9 0.026 9.1E-07 59.1 5.8 87 196-287 182-284 (370)
365 4aj2_A L-lactate dehydrogenase 94.9 0.033 1.1E-06 57.9 6.5 94 194-288 16-137 (331)
366 3ip1_A Alcohol dehydrogenase, 94.9 0.043 1.5E-06 58.2 7.5 89 196-288 213-319 (404)
367 1pl8_A Human sorbitol dehydrog 94.9 0.044 1.5E-06 57.0 7.4 88 196-288 171-274 (356)
368 1kyq_A Met8P, siroheme biosynt 94.8 0.0077 2.6E-07 61.0 1.5 40 192-231 8-47 (274)
369 1mld_A Malate dehydrogenase; o 94.8 0.057 2E-06 55.6 8.0 95 198-295 1-123 (314)
370 3rui_A Ubiquitin-like modifier 94.8 0.069 2.4E-06 55.6 8.6 62 155-229 4-67 (340)
371 1iz0_A Quinone oxidoreductase; 94.8 0.028 9.6E-07 57.0 5.6 85 196-287 125-218 (302)
372 1oi7_A Succinyl-COA synthetase 94.8 0.024 8.3E-07 57.7 5.0 101 197-304 7-114 (288)
373 3e5r_O PP38, glyceraldehyde-3- 94.7 0.041 1.4E-06 57.3 6.6 31 198-228 4-36 (337)
374 3nrb_A Formyltetrahydrofolate 94.6 0.036 1.2E-06 56.5 5.9 52 526-577 7-58 (287)
375 3fpc_A NADP-dependent alcohol 94.6 0.03 1E-06 58.1 5.5 87 196-287 166-266 (352)
376 3uko_A Alcohol dehydrogenase c 94.6 0.046 1.6E-06 57.3 6.9 87 196-287 193-295 (378)
377 3uog_A Alcohol dehydrogenase; 94.6 0.038 1.3E-06 57.7 6.2 46 196-241 189-235 (363)
378 1e3j_A NADP(H)-dependent ketos 94.6 0.048 1.6E-06 56.5 7.0 88 196-288 168-272 (352)
379 3cps_A Glyceraldehyde 3-phosph 94.6 0.06 2E-06 56.4 7.6 86 198-288 18-139 (354)
380 1obb_A Maltase, alpha-glucosid 94.6 0.038 1.3E-06 60.3 6.4 113 197-310 3-174 (480)
381 3k92_A NAD-GDH, NAD-specific g 94.6 0.35 1.2E-05 51.7 13.7 107 192-306 216-342 (424)
382 1pqw_A Polyketide synthase; ro 94.6 0.022 7.5E-07 53.8 3.9 35 196-230 38-73 (198)
383 2hcy_A Alcohol dehydrogenase 1 94.5 0.04 1.4E-06 57.0 6.2 88 196-288 169-270 (347)
384 2yfk_A Aspartate/ornithine car 94.5 0.11 3.7E-06 55.5 9.6 97 144-258 153-270 (418)
385 1u8s_A Glycine cleavage system 94.5 0.031 1E-06 53.1 4.8 49 527-577 7-55 (192)
386 1vkn_A N-acetyl-gamma-glutamyl 94.5 0.066 2.3E-06 56.1 7.6 95 197-298 13-118 (351)
387 2d4a_B Malate dehydrogenase; a 94.4 0.052 1.8E-06 55.8 6.6 63 199-262 1-78 (308)
388 3keo_A Redox-sensing transcrip 94.4 0.02 6.9E-07 55.8 3.2 66 197-262 84-159 (212)
389 1f8f_A Benzyl alcohol dehydrog 94.4 0.028 9.7E-07 58.7 4.6 87 196-287 190-289 (371)
390 4e4t_A Phosphoribosylaminoimid 94.4 0.049 1.7E-06 58.3 6.5 64 194-257 32-102 (419)
391 2xxj_A L-LDH, L-lactate dehydr 94.4 0.053 1.8E-06 55.7 6.5 93 198-293 1-120 (310)
392 2yyy_A Glyceraldehyde-3-phosph 94.3 0.088 3E-06 55.0 8.2 84 198-287 3-113 (343)
393 2we8_A Xanthine dehydrogenase; 94.3 0.12 4.2E-06 54.7 9.3 87 197-304 204-296 (386)
394 3h2s_A Putative NADH-flavin re 94.3 0.077 2.6E-06 50.5 7.1 64 198-261 1-72 (224)
395 3h9e_O Glyceraldehyde-3-phosph 94.3 0.048 1.6E-06 56.8 5.9 36 198-233 8-44 (346)
396 3ip3_A Oxidoreductase, putativ 94.2 0.045 1.5E-06 56.5 5.7 62 198-260 3-76 (337)
397 2h6e_A ADH-4, D-arabinose 1-de 94.2 0.037 1.3E-06 57.2 5.1 87 196-287 170-269 (344)
398 3qvo_A NMRA family protein; st 94.2 0.029 9.9E-07 54.5 3.9 67 195-261 21-98 (236)
399 2yfq_A Padgh, NAD-GDH, NAD-spe 94.2 0.099 3.4E-06 56.0 8.3 95 192-292 207-327 (421)
400 3vtf_A UDP-glucose 6-dehydroge 94.2 0.091 3.1E-06 56.7 8.0 85 193-286 329-426 (444)
401 3upl_A Oxidoreductase; rossman 94.1 0.067 2.3E-06 57.7 6.9 64 198-261 24-117 (446)
402 2fp4_A Succinyl-COA ligase [GD 94.1 0.042 1.4E-06 56.5 5.1 107 192-304 8-121 (305)
403 4f3y_A DHPR, dihydrodipicolina 94.1 0.038 1.3E-06 55.9 4.6 63 198-260 8-82 (272)
404 3fi9_A Malate dehydrogenase; s 94.1 0.038 1.3E-06 57.7 4.7 65 196-260 7-85 (343)
405 3tqh_A Quinone oxidoreductase; 94.1 0.035 1.2E-06 56.8 4.4 87 196-288 152-246 (321)
406 4eye_A Probable oxidoreductase 94.0 0.054 1.9E-06 56.0 5.8 86 196-287 159-257 (342)
407 2ep5_A 350AA long hypothetical 94.0 0.037 1.3E-06 57.9 4.5 84 198-287 5-108 (350)
408 3oqb_A Oxidoreductase; structu 94.0 0.088 3E-06 55.2 7.5 65 198-262 7-94 (383)
409 3ius_A Uncharacterized conserv 94.0 0.056 1.9E-06 53.6 5.6 64 197-262 5-74 (286)
410 2ejw_A HDH, homoserine dehydro 94.0 0.021 7.3E-07 59.4 2.6 102 198-304 4-116 (332)
411 1v9l_A Glutamate dehydrogenase 93.9 0.2 6.7E-06 53.7 9.9 34 192-225 205-238 (421)
412 1lu9_A Methylene tetrahydromet 93.9 0.084 2.9E-06 53.2 6.7 38 193-230 115-153 (287)
413 2vn8_A Reticulon-4-interacting 93.8 0.16 5.4E-06 53.1 9.0 90 196-289 183-282 (375)
414 1lnq_A MTHK channels, potassiu 93.8 0.04 1.4E-06 56.8 4.2 86 197-285 115-209 (336)
415 3gms_A Putative NADPH:quinone 93.8 0.049 1.7E-06 56.2 4.9 86 196-287 144-243 (340)
416 2bma_A Glutamate dehydrogenase 93.8 0.3 1E-05 52.9 11.0 34 192-225 247-280 (470)
417 3r6d_A NAD-dependent epimerase 93.8 0.032 1.1E-06 53.4 3.2 64 198-261 6-83 (221)
418 3goh_A Alcohol dehydrogenase, 93.7 0.059 2E-06 54.9 5.4 85 196-287 142-229 (315)
419 4dup_A Quinone oxidoreductase; 93.6 0.052 1.8E-06 56.4 4.8 86 196-287 167-265 (353)
420 3fbg_A Putative arginate lyase 93.6 0.052 1.8E-06 56.2 4.8 45 196-240 150-196 (346)
421 1hdg_O Holo-D-glyceraldehyde-3 93.6 0.056 1.9E-06 56.2 4.9 86 198-288 1-123 (332)
422 4hv4_A UDP-N-acetylmuramate--L 93.5 0.079 2.7E-06 57.9 6.3 107 197-303 22-146 (494)
423 1v3u_A Leukotriene B4 12- hydr 93.5 0.062 2.1E-06 55.1 5.0 45 196-240 145-191 (333)
424 3ijp_A DHPR, dihydrodipicolina 93.4 0.074 2.5E-06 54.2 5.4 62 198-259 22-96 (288)
425 1vj0_A Alcohol dehydrogenase, 93.4 0.093 3.2E-06 55.1 6.4 46 196-241 195-242 (380)
426 3kzn_A Aotcase, N-acetylornith 93.4 1 3.5E-05 47.1 14.3 102 138-259 151-273 (359)
427 3dr3_A N-acetyl-gamma-glutamyl 93.4 0.051 1.7E-06 56.6 4.3 87 198-289 5-108 (337)
428 1hdo_A Biliverdin IX beta redu 93.4 0.069 2.4E-06 49.8 4.8 66 197-262 3-78 (206)
429 3qwb_A Probable quinone oxidor 93.4 0.058 2E-06 55.4 4.7 45 196-240 148-194 (334)
430 3jyn_A Quinone oxidoreductase; 93.4 0.058 2E-06 55.2 4.6 86 196-287 140-239 (325)
431 3aoe_E Glutamate dehydrogenase 93.4 0.21 7.1E-06 53.5 8.9 107 192-306 213-336 (419)
432 2c0c_A Zinc binding alcohol de 93.3 0.048 1.7E-06 56.9 3.9 87 196-288 163-262 (362)
433 1u8x_X Maltose-6'-phosphate gl 93.3 0.11 3.9E-06 56.5 6.9 113 197-309 28-193 (472)
434 1o6z_A MDH, malate dehydrogena 93.3 0.13 4.4E-06 52.5 7.0 65 198-262 1-81 (303)
435 3vh1_A Ubiquitin-like modifier 93.3 0.16 5.6E-06 56.6 8.2 37 193-229 323-360 (598)
436 4b7c_A Probable oxidoreductase 93.2 0.052 1.8E-06 55.8 4.0 87 196-288 149-249 (336)
437 4gsl_A Ubiquitin-like modifier 93.2 0.15 5.3E-06 56.9 7.9 74 144-230 284-360 (615)
438 1gad_O D-glyceraldehyde-3-phos 93.2 0.098 3.4E-06 54.3 6.0 31 199-229 3-34 (330)
439 3nv9_A Malic enzyme; rossmann 93.1 0.54 1.8E-05 50.6 11.6 125 143-291 186-331 (487)
440 2b5w_A Glucose dehydrogenase; 93.1 0.089 3E-06 54.7 5.6 45 197-241 173-224 (357)
441 2dq4_A L-threonine 3-dehydroge 93.1 0.049 1.7E-06 56.3 3.6 35 196-230 164-199 (343)
442 3dhn_A NAD-dependent epimerase 93.1 0.062 2.1E-06 51.4 4.1 64 198-261 5-77 (227)
443 3q98_A Transcarbamylase; rossm 93.1 0.54 1.8E-05 50.0 11.6 97 145-259 157-274 (399)
444 1smk_A Malate dehydrogenase, g 93.0 0.08 2.8E-06 54.7 5.0 66 197-262 8-87 (326)
445 1u8s_A Glycine cleavage system 93.0 0.19 6.5E-06 47.5 7.2 50 526-575 93-148 (192)
446 1kol_A Formaldehyde dehydrogen 92.9 0.1 3.6E-06 54.9 5.8 92 196-287 185-300 (398)
447 3hhp_A Malate dehydrogenase; M 92.9 0.2 6.9E-06 51.5 7.7 96 198-296 1-125 (312)
448 3ing_A Homoserine dehydrogenas 92.8 0.13 4.6E-06 53.2 6.3 105 198-303 5-134 (325)
449 2j3h_A NADP-dependent oxidored 92.8 0.063 2.2E-06 55.3 3.9 45 196-240 155-202 (345)
450 2x0j_A Malate dehydrogenase; o 92.8 0.14 4.7E-06 52.4 6.2 98 198-297 1-126 (294)
451 3hn7_A UDP-N-acetylmuramate-L- 92.7 0.16 5.6E-06 55.9 7.3 109 195-303 17-146 (524)
452 4ina_A Saccharopine dehydrogen 92.7 0.063 2.2E-06 57.2 3.8 85 198-287 2-107 (405)
453 2eih_A Alcohol dehydrogenase; 92.7 0.11 3.7E-06 53.6 5.4 44 196-239 166-211 (343)
454 3c8m_A Homoserine dehydrogenas 92.6 0.086 2.9E-06 54.7 4.5 105 198-303 7-138 (331)
455 2x5o_A UDP-N-acetylmuramoylala 92.6 0.087 3E-06 56.6 4.7 66 194-260 2-73 (439)
456 1bgv_A Glutamate dehydrogenase 92.6 0.22 7.4E-06 53.7 7.7 34 192-225 225-258 (449)
457 1qor_A Quinone oxidoreductase; 92.5 0.083 2.8E-06 54.0 4.3 45 196-240 140-186 (327)
458 1mv8_A GMD, GDP-mannose 6-dehy 92.5 0.16 5.4E-06 54.5 6.7 85 196-286 312-419 (436)
459 3cmc_O GAPDH, glyceraldehyde-3 92.5 0.13 4.3E-06 53.6 5.7 30 199-228 3-33 (334)
460 3mtj_A Homoserine dehydrogenas 92.5 0.13 4.5E-06 55.5 5.9 62 199-260 12-87 (444)
461 2bka_A CC3, TAT-interacting pr 92.5 0.14 4.7E-06 49.4 5.6 68 195-262 16-95 (242)
462 3on5_A BH1974 protein; structu 92.4 0.21 7.1E-06 52.5 7.2 134 197-363 199-344 (362)
463 3oig_A Enoyl-[acyl-carrier-pro 92.4 0.38 1.3E-05 47.3 8.9 38 193-230 3-43 (266)
464 2dph_A Formaldehyde dismutase; 92.4 0.083 2.8E-06 55.8 4.2 92 196-288 185-300 (398)
465 3gqv_A Enoyl reductase; medium 92.3 0.27 9.1E-06 51.3 8.0 88 195-287 163-263 (371)
466 2nyi_A Unknown protein; protei 92.3 0.18 6.3E-06 48.0 6.2 47 527-575 6-52 (195)
467 1ebf_A Homoserine dehydrogenas 92.2 0.081 2.8E-06 55.6 3.8 30 199-228 6-40 (358)
468 1xq6_A Unknown protein; struct 92.2 0.19 6.5E-06 48.3 6.2 67 196-262 3-80 (253)
469 1xgk_A Nitrogen metabolite rep 92.1 0.13 4.6E-06 53.3 5.3 95 196-290 4-115 (352)
470 3pi7_A NADH oxidoreductase; gr 92.0 0.19 6.5E-06 51.9 6.4 85 197-287 165-263 (349)
471 4id9_A Short-chain dehydrogena 92.0 0.16 5.5E-06 51.8 5.7 66 192-262 14-88 (347)
472 4dvj_A Putative zinc-dependent 92.0 0.19 6.6E-06 52.3 6.4 46 196-241 171-219 (363)
473 3dqp_A Oxidoreductase YLBE; al 91.9 0.1 3.5E-06 49.7 3.9 65 198-263 1-75 (219)
474 3jv7_A ADH-A; dehydrogenase, n 91.9 0.12 4.3E-06 53.1 4.8 87 196-287 171-270 (345)
475 1s6y_A 6-phospho-beta-glucosid 91.9 0.28 9.6E-06 53.0 7.7 113 197-309 7-174 (450)
476 1dih_A Dihydrodipicolinate red 91.9 0.046 1.6E-06 55.2 1.4 33 198-230 6-41 (273)
477 3gpi_A NAD-dependent epimerase 91.9 0.11 3.7E-06 51.6 4.1 62 196-260 2-72 (286)
478 2j8z_A Quinone oxidoreductase; 91.8 0.13 4.5E-06 53.3 4.8 44 196-239 162-207 (354)
479 2f06_A Conserved hypothetical 91.7 0.28 9.5E-06 44.1 6.4 59 527-589 7-65 (144)
480 3nkl_A UDP-D-quinovosamine 4-d 91.7 0.13 4.4E-06 45.7 4.1 66 197-262 4-76 (141)
481 3hsk_A Aspartate-semialdehyde 91.7 0.15 5.3E-06 53.9 5.2 89 195-288 17-125 (381)
482 4g65_A TRK system potassium up 91.7 0.12 4.2E-06 56.0 4.5 66 197-262 3-79 (461)
483 1qyc_A Phenylcoumaran benzylic 91.7 0.21 7.3E-06 49.8 6.1 64 197-260 4-86 (308)
484 2wm3_A NMRA-like family domain 91.6 0.25 8.7E-06 49.2 6.5 64 197-260 5-81 (299)
485 1wly_A CAAR, 2-haloacrylate re 91.6 0.15 5.3E-06 52.2 5.0 44 196-239 145-190 (333)
486 2ph5_A Homospermidine synthase 91.6 0.13 4.6E-06 55.7 4.7 33 198-230 14-50 (480)
487 3ff4_A Uncharacterized protein 91.5 0.16 5.3E-06 45.0 4.3 97 198-306 5-106 (122)
488 2r00_A Aspartate-semialdehyde 91.5 0.063 2.2E-06 55.8 2.0 86 198-288 4-97 (336)
489 1jvb_A NAD(H)-dependent alcoho 91.5 0.12 4.2E-06 53.3 4.2 45 196-240 170-217 (347)
490 2rir_A Dipicolinate synthase, 91.5 0.26 8.8E-06 50.0 6.5 105 195-306 5-120 (300)
491 4a0s_A Octenoyl-COA reductase/ 91.3 0.21 7.2E-06 53.4 5.9 87 196-288 220-337 (447)
492 2zcu_A Uncharacterized oxidore 91.3 0.13 4.3E-06 50.9 3.8 62 199-260 1-74 (286)
493 2yv1_A Succinyl-COA ligase [AD 91.2 0.087 3E-06 53.7 2.7 100 199-304 15-120 (294)
494 1p3d_A UDP-N-acetylmuramate--a 91.1 0.19 6.5E-06 54.5 5.4 61 197-258 18-84 (475)
495 3ruf_A WBGU; rossmann fold, UD 91.1 0.3 1E-05 49.8 6.6 68 194-261 22-110 (351)
496 2gas_A Isoflavone reductase; N 91.1 0.2 6.8E-06 50.0 5.1 65 197-261 2-86 (307)
497 3r3j_A Glutamate dehydrogenase 91.0 0.65 2.2E-05 50.0 9.2 36 192-227 234-270 (456)
498 4dpk_A Malonyl-COA/succinyl-CO 90.9 0.16 5.5E-06 53.3 4.4 85 198-288 8-111 (359)
499 4dpl_A Malonyl-COA/succinyl-CO 90.9 0.16 5.5E-06 53.3 4.4 85 198-288 8-111 (359)
500 2x5j_O E4PDH, D-erythrose-4-ph 90.8 0.22 7.4E-06 51.9 5.3 31 198-228 3-37 (339)
No 1
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=100.00 E-value=3.1e-100 Score=850.87 Aligned_cols=525 Identities=36% Similarity=0.551 Sum_probs=495.3
Q ss_pred CCCCeEEEecCCCHhHHHHhcccCcEEEccCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcCcccCcc
Q 007512 56 SSKPTVLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNV 135 (600)
Q Consensus 56 ~~~~~ilv~~~l~~~~~~~l~~~~~v~~~~~~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~d~i 135 (600)
|.|||||+++++.++..+.|++..++++....+++++.+.++++|++++++.+++++++++++ |+||||+++|+|+|||
T Consensus 2 m~~~~vl~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~~d~li~~~~~~~~~~~l~~~-~~Lk~i~~~~~G~d~i 80 (529)
T 1ygy_A 2 VSLPVVLIADKLAPSTVAALGDQVEVRWVDGPDRDKLLAAVPEADALLVRSATTVDAEVLAAA-PKLKIVARAGVGLDNV 80 (529)
T ss_dssp -CCCEEEECSSCCGGGGTTSCSSSEEEECCTTSHHHHHHHGGGCSEEEECSSSCBCHHHHHTC-TTCCEEEESSSCCTTB
T ss_pred CCCcEEEEeCCCCHHHHHHHhcCceEEEcCCCCHHHHHHHhcCCEEEEEcCCCCCCHHHHhhC-CCCcEEEECCcCcCcc
Confidence 567899999999999999888767787766778899999999999999999899999999987 6999999999999999
Q ss_pred ChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecChhHHHHHHH
Q 007512 136 DLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARR 215 (600)
Q Consensus 136 D~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~IG~~vA~~ 215 (600)
|+++|+++||.|+|+|++|+.+||||++++||+++|+++++++.+++|+|.+..+.|.+|+|+||||||+|+||+++|++
T Consensus 81 d~~~~~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~ 160 (529)
T 1ygy_A 81 DVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQR 160 (529)
T ss_dssp CHHHHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CHhHHHhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999887778999999999999999999999999
Q ss_pred hhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCccccHH
Q 007512 216 AKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEE 295 (600)
Q Consensus 216 l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~ 295 (600)
|+++||+|++|||+.+.+.+.+.|+..+++++++++||+|++|+|++++|+++++++.++.||+|+++||++||+++|++
T Consensus 161 l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~ 240 (529)
T 1ygy_A 161 IAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEA 240 (529)
T ss_dssp HHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHH
T ss_pred HHhCCCEEEEECCCCChhHHHhcCcEEcCHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHH
Confidence 99999999999998877777788988779999999999999999999999999999899999999999999999999999
Q ss_pred HHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCccccCCCCC
Q 007512 296 ALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGELAATAVNAPMVP 375 (600)
Q Consensus 296 aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~~vn~~~i~ 375 (600)
+|+++|++|+++||++|||+.||+ +++|||+++||++|||++++|.|++++++..+++++.+++.|..+.+.||.+.
T Consensus 241 aL~~al~~g~i~ga~lDv~~~eP~-~~~~L~~~~~vilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~~~~~~v~~~~-- 317 (529)
T 1ygy_A 241 ALADAITGGHVRAAGLDVFATEPC-TDSPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGEFVPDAVNVGG-- 317 (529)
T ss_dssp HHHHHHHTSSEEEEEESSCSSSSC-SCCGGGGCTTEEECSSCSSCBHHHHHHHHHHHHHHHHHHHTTCCCTTBCSCCS--
T ss_pred HHHHHHHcCCccEEEEeeccCCCC-CCchHHhCCCEEEccccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcccCCcc--
Confidence 999999999999999999999996 68999999999999999999999999999999999999999999888888664
Q ss_pred hhhhhcccchHHHHHHHHHHHHHHhcCCCCceEEEEEEeecCCCCccccccccHHHHHhhchhhhccchhhccHHHHHhh
Q 007512 376 AEVLTELKPFVELAEKLGRLAVQLVAGGSGVKTVKVSYASSRAPDDLDTRLLRAMITKGLIEPISDVFVNLVNADYTAKQ 455 (600)
Q Consensus 376 ~~~~~~~~p~~~la~~lG~l~~qL~~g~~~~k~v~i~~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vn~vnA~~~A~e 455 (600)
++..+.+.||+.|++++|+++.||++| +|++++++|+|+++ + .+++++|+++++|+|+.+.++.+|++||+.+|++
T Consensus 318 ~~~hd~i~P~l~La~~lg~~~~qla~g--~~~ditria~G~~~-~-~~i~~~n~a~l~g~L~~~~~~~~~~vnA~~iA~e 393 (529)
T 1ygy_A 318 GVVNEEVAPWLDLVRKLGVLAGVLSDE--LPVSLSVQVRGELA-A-EEVEVLRLSALRGLFSAVIEDAVTFVNAPALAAE 393 (529)
T ss_dssp TTSCTTTTTHHHHHHHHHHHHHHTSSS--CCSEEEEEEEEGGG-G-SCCHHHHHHHHHHHTGGGSCTTCCCCCHHHHHHH
T ss_pred cccchhhhhHHHHHHHHHHHHHHHhCC--CceEEEEEEEeecc-c-cCCcHHHHHHHHHhcCCCCCCCccccCHHHHHHH
Confidence 666788889999999999999999999 89999999999998 7 6799999999999999999888999999999999
Q ss_pred cCceEEEEEeecCCCCCCCCceEEEEEeecccccccccCCCcEEEEEEEEeC--CceEEEEEcceEEEeecCccEEEEEe
Q 007512 456 RGLRLTEERILLDGSPESPLEFIQVQIANVESKFASAISESGEIKVEGRVKD--GVPHLTKVGSFEVDVSLEGSIILCRQ 533 (600)
Q Consensus 456 ~GI~v~~~~~~~~~~~~~~~n~i~v~~~~~~~~~~~~~~~~~~~~v~Gsv~g--G~~~I~~Idgf~v~~~g~~~~Liv~~ 533 (600)
+||.++|.+.+... .|+|++++++++ .++++++|.|+++| |.++|++||||++++.|++|+|++.|
T Consensus 394 ~Gi~i~~~~~~~~~---~~~n~v~v~~~~---------~~~~~~~v~Gt~~gg~g~~~i~~i~g~~v~~~~~~~~l~v~~ 461 (529)
T 1ygy_A 394 RGVTAEICKASESP---NHRSVVDVRAVG---------ADGSVVTVSGTLYGPQLSQKIVQINGRHFDLRAQGINLIIHY 461 (529)
T ss_dssp HSCEEEEEEESCCS---SSSEEEEEEEEC---------TTSCEEEEEEEEETTTTEEEEEEETTEEEEEESCSEEEEEEE
T ss_pred cCCEEEEEEccCCC---CCCCEEEEEEEE---------CCCCEEEEEEEEeCCCCcEEEEEECCEEEEecCCccEEEEEc
Confidence 99999998876443 799999999973 37889999997665 58999999999999999999999999
Q ss_pred cCCCCChhhHHhhhhcCCccccceEeeeecCCCcEEEEEEeCCCCcHHHHHHHhcCCCcceEEEeeC
Q 007512 534 VDQPGMIGTVGSILGSENVNVSFMSVGRVAPRKHAVMAIGVDEQPRKETLKKIGDVPAIEEFVFLKL 600 (600)
Q Consensus 534 ~D~pG~Ia~V~~iL~~~~INIa~m~v~R~~~g~~al~~i~~D~~~~~~~l~~l~~~~~v~~v~~i~l 600 (600)
+|+||+|++|+++|++++|||++|+++|..+++.|+|+|++|++++++++++|+++|+|.++++++|
T Consensus 462 ~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~~~~~~~l~~l~~~~~i~~v~~v~~ 528 (529)
T 1ygy_A 462 VDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQDVPDDVRTAIAAAVDAYKLEVVDL 528 (529)
T ss_dssp SCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSCCCHHHHHHHHHHHTEEEEEEEEC
T ss_pred CCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECCCCCHHHHHHHhcCCCccEEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999999999999975
No 2
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=100.00 E-value=5.3e-77 Score=641.76 Aligned_cols=392 Identities=29% Similarity=0.417 Sum_probs=348.9
Q ss_pred CCCCeEEEecCCCHhHHHHhccc-C-cEEEcc-CCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcCccc
Q 007512 56 SSKPTVLIAEKLGQAGLDLLNEF-A-NVDCAY-NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGI 132 (600)
Q Consensus 56 ~~~~~ilv~~~l~~~~~~~l~~~-~-~v~~~~-~~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~ 132 (600)
+.|+|||+++.+.+.+++.|++. . ++.+.. .++++++.+.++++|++++++.+++++++++++ |+||+|+++|+|+
T Consensus 2 ~~~~kil~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~l~~~~~~~d~l~~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~ 80 (404)
T 1sc6_A 2 KDKIKFLLVEGVHQKALESLRAAGYTNIEFHKGALDDEQLKESIRDAHFIGLRSRTHLTEDVINAA-EKLVAIGAFAIGT 80 (404)
T ss_dssp CSSCCEEECSCCCHHHHHHHHHTTCCCEEECSSCCCHHHHHHHTTSCSEEEECSSCCBCHHHHHHC-SSCCEEEECSSCC
T ss_pred CCceEEEEeCCCCHHHHHHHHhCCCcEEEEcCCCCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCcEEEECCccc
Confidence 35789999999999999999875 3 676643 568899999999999999999899999999997 6999999999999
Q ss_pred CccChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecChhHHHH
Q 007512 133 DNVDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEV 212 (600)
Q Consensus 133 d~iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~IG~~v 212 (600)
||||+++|+++||.|+|+|++|+.+||||++++||+++|+++++++.+++|+|.+..+.|.+|+|||+||||+|+||+.+
T Consensus 81 d~iD~~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~v 160 (404)
T 1sc6_A 81 NQVDLDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQL 160 (404)
T ss_dssp TTBCHHHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHH
T ss_pred CccCHHHHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999877677899999999999999999999
Q ss_pred HHHhhcCCCEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCcc
Q 007512 213 ARRAKGLGMHVIAHDPYAPADRARAIGVDLV-SFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGV 291 (600)
Q Consensus 213 A~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~i 291 (600)
|+++++|||+|++|||+.... ..++... ++++++++||+|++|+|++++|+++++++.|++||+|++|||+|||++
T Consensus 161 A~~l~~~G~~V~~~d~~~~~~---~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~ 237 (404)
T 1sc6_A 161 GILAESLGMYVYFYDIENKLP---LGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTV 237 (404)
T ss_dssp HHHHHHTTCEEEEECSSCCCC---CTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSS
T ss_pred HHHHHHCCCEEEEEcCCchhc---cCCceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChH
Confidence 999999999999999976321 1134444 899999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHhHhcCCceEEEEeccCCCCCCC----CCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCc
Q 007512 292 IDEEALVRALDSGRVAQAALDVFTEEPPPA----DSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGELAAT 367 (600)
Q Consensus 292 vde~aL~~aL~~g~i~ga~lDv~~~EP~~~----~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~ 367 (600)
+|+++|+++|++|+++||++|||+.||++. ++|||++||+++|||+|++|.|++++++..+++|+.+|++|+.+.+
T Consensus 238 vd~~aL~~aL~~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvilTPHi~~~T~ea~~~~~~~~~~nl~~~l~g~~~~~ 317 (404)
T 1sc6_A 238 VDIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLS 317 (404)
T ss_dssp BCHHHHHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTEEEECCCSCCSHHHHHHHHHHHHHHHHHHHHHCCCTT
T ss_pred HhHHHHHHHHHcCCccEEEEeecCCCCCCccccccchhhcCCCEEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCcc
Confidence 999999999999999999999999999864 5799999999999999999999999999999999999999999999
Q ss_pred cccCCCCChhhhhcccchHHHHHHHHHHHHHHhcCCCCceEEEEEEeecCCCCccccccccHHHHHhhchhhhccchhhc
Q 007512 368 AVNAPMVPAEVLTELKPFVELAEKLGRLAVQLVAGGSGVKTVKVSYASSRAPDDLDTRLLRAMITKGLIEPISDVFVNLV 447 (600)
Q Consensus 368 ~vn~~~i~~~~~~~~~p~~~la~~lG~l~~qL~~g~~~~k~v~i~~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vn~v 447 (600)
.||.|.+. +.
T Consensus 318 ~vn~p~~~-----------------------------------------~~----------------------------- 327 (404)
T 1sc6_A 318 AVNFPEVS-----------------------------------------LP----------------------------- 327 (404)
T ss_dssp BSSSCCCC-----------------------------------------CC-----------------------------
T ss_pred eecccccc-----------------------------------------cC-----------------------------
Confidence 99988655 00
Q ss_pred cHHHHHhhcCceEEEEEeecCCCCCCCCceEEEEEeecccccccccCCCcEEEEEEEEeCCceEEEEEcceEEEeecCcc
Q 007512 448 NADYTAKQRGLRLTEERILLDGSPESPLEFIQVQIANVESKFASAISESGEIKVEGRVKDGVPHLTKVGSFEVDVSLEGS 527 (600)
Q Consensus 448 nA~~~A~e~GI~v~~~~~~~~~~~~~~~n~i~v~~~~~~~~~~~~~~~~~~~~v~Gsv~gG~~~I~~Idgf~v~~~g~~~ 527 (600)
. . | .+
T Consensus 328 ---------------------~---~--~-------------------------------------------------~~ 332 (404)
T 1sc6_A 328 ---------------------L---H--G-------------------------------------------------GR 332 (404)
T ss_dssp ---------------------C---C--S-------------------------------------------------SE
T ss_pred ---------------------c---C--C-------------------------------------------------cc
Confidence 0 0 0 23
Q ss_pred EEEEEecCCCCChhhHHhhhhcCCccccceEeeeecCCCcEEEEEEeCCC--CcHHHHHHHhcCCCcceEEEe
Q 007512 528 IILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVAPRKHAVMAIGVDEQ--PRKETLKKIGDVPAIEEFVFL 598 (600)
Q Consensus 528 ~Liv~~~D~pG~Ia~V~~iL~~~~INIa~m~v~R~~~g~~al~~i~~D~~--~~~~~l~~l~~~~~v~~v~~i 598 (600)
.|++.|+|+||+|+.|+++|+++||||++|++.| +|+.|+|++++|++ ++++++++|++++++.+++++
T Consensus 333 rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r--~g~~A~~vidvD~~~~~~~~~l~~l~~i~~v~~vr~l 403 (404)
T 1sc6_A 333 RLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQT--SAQMGYVVIDIEADEDVAEKALQAMKAIPGTIRARLL 403 (404)
T ss_dssp EEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEE--CSSEEEEEEEEECCHHHHHHHHHHHHTSTTEEEEEEC
T ss_pred eEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccC--CCCEEEEEEEcCCCCCCCHHHHHHHhcCCCeeEEEEe
Confidence 4778899999999999999999999999999998 88999999999999 999999999999999999986
No 3
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=1.3e-70 Score=590.61 Aligned_cols=396 Identities=31% Similarity=0.457 Sum_probs=349.3
Q ss_pred CCCCCCCeEEEecCCCHhHHHHhcccC--cEEEc-cCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcC
Q 007512 53 DGISSKPTVLIAEKLGQAGLDLLNEFA--NVDCA-YNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAG 129 (600)
Q Consensus 53 ~~~~~~~~ilv~~~l~~~~~~~l~~~~--~v~~~-~~~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g 129 (600)
|-++.|+|||+++.+++.+.+.|++.+ ++.+. ..++++++.+.++++|++++++.+++++++|+++ |+||+|+++|
T Consensus 10 ~~~~~~~kIl~~~~i~~~~~~~l~~~g~~~v~~~~~~~~~~~l~~~~~~~d~l~v~~~~~i~~~~l~~~-p~Lk~I~~~~ 88 (416)
T 3k5p_A 10 SLSRDRINVLLLEGISQTAVEYFKSSGYTNVTHLPKALDKADLIKAISSAHIIGIRSRTQLTEEIFAAA-NRLIAVGCFS 88 (416)
T ss_dssp --CGGGSCEEECSCCCHHHHHHHHHTTCCCEEECSSCCCHHHHHHHHTTCSEEEECSSCCBCHHHHHHC-TTCCEEEECS
T ss_pred CCCCCCcEEEEECCCCHHHHHHHHHCCCcEEEECCCCCCHHHHHHHccCCEEEEEcCCCCCCHHHHHhC-CCcEEEEECc
Confidence 345668999999999999999998754 67654 3468899999999999999999899999999997 6999999999
Q ss_pred cccCccChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecChhH
Q 007512 130 VGIDNVDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVG 209 (600)
Q Consensus 130 ~G~d~iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~IG 209 (600)
+|+||||+++|+++||.|+|+|++|+.+||||+++++|+++|+++++++.+++|+|.+..+.+.+++|||+||||+|+||
T Consensus 89 ~G~d~IDl~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG 168 (416)
T 3k5p_A 89 VGTNQVELKAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIG 168 (416)
T ss_dssp SCCTTBCHHHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHH
T ss_pred cccCccCHHHHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHH
Confidence 99999999999999999999999999999999999999999999999999999999987777899999999999999999
Q ss_pred HHHHHHhhcCCCEEEEECCCCChhHHHHcCC-cccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccC
Q 007512 210 SEVARRAKGLGMHVIAHDPYAPADRARAIGV-DLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 210 ~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~-~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvar 288 (600)
+.+|+++++|||+|++||++..... .+. ...++++++++||+|++|+|++++|+++++++.|++||+|++|||+||
T Consensus 169 ~~vA~~l~~~G~~V~~yd~~~~~~~---~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aR 245 (416)
T 3k5p_A 169 SQVGNLAESLGMTVRYYDTSDKLQY---GNVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNAR 245 (416)
T ss_dssp HHHHHHHHHTTCEEEEECTTCCCCB---TTBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSC
T ss_pred HHHHHHHHHCCCEEEEECCcchhcc---cCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCC
Confidence 9999999999999999998753211 122 245899999999999999999999999999999999999999999999
Q ss_pred CccccHHHHHHhHhcCCceEEEEeccCCCCCCCC----CccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 007512 289 GGVIDEEALVRALDSGRVAQAALDVFTEEPPPAD----SKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGEL 364 (600)
Q Consensus 289 g~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~----~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~~ 364 (600)
|+++|+++|+++|++|+++||++|||+.||++.+ +|||++||+++|||+|++|.|++++++..+++++.+|++++.
T Consensus 246 G~vvd~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~nl~~~l~~g~ 325 (416)
T 3k5p_A 246 GSDVDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEAQERIGTEVTRKLVEYSDVGS 325 (416)
T ss_dssp TTSBCHHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ChhhhHHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHhhCC
Confidence 9999999999999999999999999999998765 799999999999999999999999999999999999998888
Q ss_pred CCccccCCCCChhhhhcccchHHHHHHHHHHHHHHhcCCCCceEEEEEEeecCCCCccccccccHHHHHhhchhhhccch
Q 007512 365 AATAVNAPMVPAEVLTELKPFVELAEKLGRLAVQLVAGGSGVKTVKVSYASSRAPDDLDTRLLRAMITKGLIEPISDVFV 444 (600)
Q Consensus 365 ~~~~vn~~~i~~~~~~~~~p~~~la~~lG~l~~qL~~g~~~~k~v~i~~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~v 444 (600)
+.+.||.|.+.. |
T Consensus 326 ~~~~Vn~p~~~~-------~------------------------------------------------------------ 338 (416)
T 3k5p_A 326 TVGAVNFPQVQL-------P------------------------------------------------------------ 338 (416)
T ss_dssp CTTBSSSCCCCC-------C------------------------------------------------------------
T ss_pred CCceeeCCCcCC-------C------------------------------------------------------------
Confidence 888887542210 0
Q ss_pred hhccHHHHHhhcCceEEEEEeecCCCCCCCCceEEEEEeecccccccccCCCcEEEEEEEEeCCceEEEEEcceEEEeec
Q 007512 445 NLVNADYTAKQRGLRLTEERILLDGSPESPLEFIQVQIANVESKFASAISESGEIKVEGRVKDGVPHLTKVGSFEVDVSL 524 (600)
Q Consensus 445 n~vnA~~~A~e~GI~v~~~~~~~~~~~~~~~n~i~v~~~~~~~~~~~~~~~~~~~~v~Gsv~gG~~~I~~Idgf~v~~~g 524 (600)
.. + +
T Consensus 339 -------------------~~--~-------~------------------------------------------------ 342 (416)
T 3k5p_A 339 -------------------PR--P-------T------------------------------------------------ 342 (416)
T ss_dssp -------------------CC--S-------S------------------------------------------------
T ss_pred -------------------CC--C-------C------------------------------------------------
Confidence 00 0 1
Q ss_pred CccEEEEEecCCCCChhhHHhhhhcCCccccceEeeeecCCCcEEEEEEeC--CCCcHHHHHHHhcCCCcceEEEe
Q 007512 525 EGSIILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVAPRKHAVMAIGVD--EQPRKETLKKIGDVPAIEEFVFL 598 (600)
Q Consensus 525 ~~~~Liv~~~D~pG~Ia~V~~iL~~~~INIa~m~v~R~~~g~~al~~i~~D--~~~~~~~l~~l~~~~~v~~v~~i 598 (600)
.+-+.+.|+++|||++.|.++|+++||||.+|... .+|+.|..++.+| ++.+++++++|++++++..+|++
T Consensus 343 -~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~--~~~~~~y~~~d~~~~~~~~~~~~~~l~~~~~~~~~r~~ 415 (416)
T 3k5p_A 343 -GTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQ--TDGEVGYLVMEADGVGEASDAVLQEIREIPGTIRARLL 415 (416)
T ss_dssp -SEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEE--ECSSCEEEEEEECCCHHHHHHHHHHHHTSTTEEEEEEE
T ss_pred -ceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhcc--CCCceEEEEEEecCCCCCcHHHHHHHHhCCCEEEEEEe
Confidence 12244679999999999999999999999999874 6788899999999 88899999999999999999986
No 4
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=1.7e-67 Score=556.19 Aligned_cols=312 Identities=24% Similarity=0.454 Sum_probs=290.8
Q ss_pred CCCCeEEEecCCCHhHHHHhcccCcEEEcc---CCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcCccc
Q 007512 56 SSKPTVLIAEKLGQAGLDLLNEFANVDCAY---NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGI 132 (600)
Q Consensus 56 ~~~~~ilv~~~l~~~~~~~l~~~~~v~~~~---~~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~ 132 (600)
+.|||||++++++++.++.|++.+++.+.. .++++++.+.++++|++++++.++++++++++++|+||+|+++|+|+
T Consensus 26 ~~~~kvlv~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~l~~~~~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~~~G~ 105 (345)
T 4g2n_A 26 HPIQKAFLCRRFTPAIEAELRQRFDLEVNLEDTVLTPSGIASRAHGAEVLFVTATEAITAEVIRKLQPGLKTIATLSVGY 105 (345)
T ss_dssp -CCCEEEESSCCCHHHHHHHHHHSEEEECTTCCCCCHHHHHHHTTTCSEEEECTTSCBCHHHHHHTTTTCCEEEESSSCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHccCCEEEecCCCCCCHHHHHHHhcCCeEEEEeCCCCCCHHHHHhhcCCceEEEEcCCcc
Confidence 568999999999999999999888887642 46789999999999999998878999999998756999999999999
Q ss_pred CccChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccc---cccceeccCCEEEEEecChhH
Q 007512 133 DNVDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRN---KYVGVSLVGKTLAVLGFGKVG 209 (600)
Q Consensus 133 d~iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~---~~~g~~l~gktiGIIGlG~IG 209 (600)
||||+++|+++||.|+|+||+++.+||||++++||+++|+++++++.+++|+|.+. .+.|.+|+||||||||+|+||
T Consensus 106 D~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG 185 (345)
T 4g2n_A 106 DHIDMAAARSLGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIG 185 (345)
T ss_dssp TTBCHHHHHHTTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHH
T ss_pred cccCHHHHHhCCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhH
Confidence 99999999999999999999999999999999999999999999999999999853 246899999999999999999
Q ss_pred HHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc-CHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEcc
Q 007512 210 SEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV-SFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 210 ~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNva 287 (600)
+++|+++++|||+|++||++. +.+.+ .|+.++ ++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|
T Consensus 186 ~~vA~~l~~~G~~V~~~dr~~~~~~~~--~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~a 263 (345)
T 4g2n_A 186 RAIATRARGFGLAIHYHNRTRLSHALE--EGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINIS 263 (345)
T ss_dssp HHHHHHHHTTTCEEEEECSSCCCHHHH--TTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECS
T ss_pred HHHHHHHHHCCCEEEEECCCCcchhhh--cCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECC
Confidence 999999999999999999986 33332 277776 89999999999999999999999999999999999999999999
Q ss_pred CCccccHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCc
Q 007512 288 RGGVIDEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGELAAT 367 (600)
Q Consensus 288 rg~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~ 367 (600)
||+++|+++|+++|++|+|+||+||||+.|| +.++|||++||+++|||+|++|.|+++++...+++|+.+|++|+.+.+
T Consensus 264 RG~~vde~aL~~aL~~g~i~gA~LDVf~~EP-~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~l~g~~~~~ 342 (345)
T 4g2n_A 264 RGDLINDDALIEALRSKHLFAAGLDVFANEP-AIDPRYRSLDNIFLTPHIGSATHETRDAMGWLLIQGIEALNQSDVPDN 342 (345)
T ss_dssp CGGGBCHHHHHHHHHHTSEEEEEESCCTTTT-SCCTTGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCCTT
T ss_pred CCchhCHHHHHHHHHhCCceEEEecCCCCCC-CCCchHHhCCCEEEcCccCcCCHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 9999999999999999999999999999999 689999999999999999999999999999999999999999999888
Q ss_pred ccc
Q 007512 368 AVN 370 (600)
Q Consensus 368 ~vn 370 (600)
.|+
T Consensus 343 ~V~ 345 (345)
T 4g2n_A 343 LIS 345 (345)
T ss_dssp BCC
T ss_pred CcC
Confidence 764
No 5
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=100.00 E-value=2.3e-66 Score=545.86 Aligned_cols=314 Identities=30% Similarity=0.474 Sum_probs=297.4
Q ss_pred CCeEEEecCCCHhHHHHhcccCcEEEcc---CCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcCcccCc
Q 007512 58 KPTVLIAEKLGQAGLDLLNEFANVDCAY---NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDN 134 (600)
Q Consensus 58 ~~~ilv~~~l~~~~~~~l~~~~~v~~~~---~~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~d~ 134 (600)
|||||+++++.++.++.|++.+++.+.. .++++++.+.++++|++++++.+++++++++++ |+||+|++.|+|+||
T Consensus 2 ~~kvlv~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~i~~~~l~~~-~~Lk~I~~~~~G~d~ 80 (330)
T 4e5n_A 2 LPKLVITHRVHEEILQLLAPHCELITNQTDSTLTREEILRRCRDAQAMMAFMPDRVDADFLQAC-PELRVIGCALKGFDN 80 (330)
T ss_dssp CCEEEECSCCCHHHHHHHTTTCEEECCCSSSCCCHHHHHHHHTTCSEEEECTTCCBCHHHHHHC-TTCCEEEESSSCCTT
T ss_pred CCEEEEecCCCHHHHHHHHhCCeEEEecCCCCCCHHHHHHHhCCCeEEEEeCCCCCCHHHHhhC-CCCcEEEECCCcccc
Confidence 7899999999999999999888877642 357899999999999999988889999999998 699999999999999
Q ss_pred cChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccc--cccceeccCCEEEEEecChhHHHH
Q 007512 135 VDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRN--KYVGVSLVGKTLAVLGFGKVGSEV 212 (600)
Q Consensus 135 iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~--~~~g~~l~gktiGIIGlG~IG~~v 212 (600)
||+++|+++||.|+|+||+|+.+||||++++||+++|+++++++.+++|+|..+ .+.|.+|+|+||||||+|+||+++
T Consensus 81 id~~~~~~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~v 160 (330)
T 4e5n_A 81 FDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAM 160 (330)
T ss_dssp BCHHHHHHTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHH
T ss_pred cCHHHHHhcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999743 346889999999999999999999
Q ss_pred HHHhhcCCCEEEEECCCC-ChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCcc
Q 007512 213 ARRAKGLGMHVIAHDPYA-PADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGV 291 (600)
Q Consensus 213 A~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~i 291 (600)
|+++++|||+|++||++. ..+.+.+.|+...++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||++
T Consensus 161 A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~ 240 (330)
T 4e5n_A 161 ADRLQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSV 240 (330)
T ss_dssp HHHTTTSCCEEEEECSSCCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGG
T ss_pred HHHHHHCCCEEEEECCCCCcHhHHHhcCceeCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCch
Confidence 999999999999999987 6666777888888999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHhHhcCCceEEEEeccCCC-------CCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 007512 292 IDEEALVRALDSGRVAQAALDVFTEE-------PPPADSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGEL 364 (600)
Q Consensus 292 vde~aL~~aL~~g~i~ga~lDv~~~E-------P~~~~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~~ 364 (600)
+|+++|+++|++|+|+||++|||+.| |++.++|||++||+++|||+|++|.|+++++...+++|+.+|++|+.
T Consensus 241 vd~~aL~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~g~~ 320 (330)
T 4e5n_A 241 VDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAVRAVRLEIERCAAQNILQALAGER 320 (330)
T ss_dssp BCHHHHHHHHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSEEECSSCTTCCHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred hCHHHHHHHHHhCCccEEEecccccccccccCCCCCCCchHHcCCCEEECCcCCCChHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999 98889999999999999999999999999999999999999999999
Q ss_pred CCccccCC
Q 007512 365 AATAVNAP 372 (600)
Q Consensus 365 ~~~~vn~~ 372 (600)
+.+.||+|
T Consensus 321 ~~~~vn~~ 328 (330)
T 4e5n_A 321 PINAVNRL 328 (330)
T ss_dssp CTTBSSCC
T ss_pred CCCccCCC
Confidence 99999975
No 6
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.8e-65 Score=539.77 Aligned_cols=310 Identities=28% Similarity=0.419 Sum_probs=255.9
Q ss_pred CCCCCeEEEecCCCHhHHHHhcccCcEEEcc-CCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcCcccC
Q 007512 55 ISSKPTVLIAEKLGQAGLDLLNEFANVDCAY-NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGID 133 (600)
Q Consensus 55 ~~~~~~ilv~~~l~~~~~~~l~~~~~v~~~~-~~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~d 133 (600)
.+.||+||+++++.++.++.|++.+++...+ ..+++++.+.++++|++++++.+++++++++++ |+||+|+++|+|+|
T Consensus 27 ~~~~~~vl~~~~~~~~~~~~L~~~~~v~~~~~~~~~~~~~~~~~~~d~li~~~~~~i~~~~l~~~-p~Lk~I~~~g~G~d 105 (340)
T 4dgs_A 27 RNVKPDLLLVEPMMPFVMDELQRNYSVHRLYQAADRPALEAALPSIRAVATGGGAGLSNEWMEKL-PSLGIIAINGVGTD 105 (340)
T ss_dssp ------CEECSCCCHHHHHTHHHHSCCEETTCGGGHHHHHHHGGGCCEEEEETTTCBCHHHHHHC-SSCCEEEEESSCCT
T ss_pred CCCCCEEEEECCCCHHHHHHHhcCCcEEEeCCCCCHHHHHHHhCCcEEEEEcCCCCCCHHHHhhC-CCCEEEEECCCCcc
Confidence 4568999999999999999998877777543 246778888889999999998889999999997 69999999999999
Q ss_pred ccChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccc-c-ccceeccCCEEEEEecChhHHH
Q 007512 134 NVDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRN-K-YVGVSLVGKTLAVLGFGKVGSE 211 (600)
Q Consensus 134 ~iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~-~-~~g~~l~gktiGIIGlG~IG~~ 211 (600)
|||+++|+++||.|+|+||+++.+||||++++||+++|+++++++.+++|+|.+. . ..|.+|+||||||||+|.||+.
T Consensus 106 ~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~ 185 (340)
T 4dgs_A 106 KVDLARARRRNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRA 185 (340)
T ss_dssp TBCHHHHHHTTCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHH
T ss_pred ccCHHHHHhCCEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999875 2 2578999999999999999999
Q ss_pred HHHHhhcCCCEEEEECCCCChhHHHHcCCc-ccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCc
Q 007512 212 VARRAKGLGMHVIAHDPYAPADRARAIGVD-LVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGG 290 (600)
Q Consensus 212 vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~-~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ 290 (600)
+|+++++|||+|++||++... ..++. ..++++++++||+|++|+|++++|+++++++.|+.||+|++|||++||+
T Consensus 186 vA~~l~~~G~~V~~~dr~~~~----~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~ 261 (340)
T 4dgs_A 186 LASRAEAFGMSVRYWNRSTLS----GVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGN 261 (340)
T ss_dssp HHHHHHTTTCEEEEECSSCCT----TSCCEECSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC-
T ss_pred HHHHHHHCCCEEEEEcCCccc----ccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCc
Confidence 999999999999999998643 22343 3589999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCcccc
Q 007512 291 VIDEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGELAATAVN 370 (600)
Q Consensus 291 ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~~vn 370 (600)
++|+++|+++|++|+|+||+||||+.||++. +|||++||+++|||+|++|.|++++++..+++|+.+|++|+++.+.||
T Consensus 262 vvde~aL~~aL~~g~i~gA~LDVf~~EP~~~-~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~Vn 340 (340)
T 4dgs_A 262 VVDEDALIEALKSGTIAGAGLDVFVNEPAIR-SEFHTTPNTVLMPHQGSATVETRMAMGKLVLANLAAHFAGEKAPNTVN 340 (340)
T ss_dssp -------------CCSSEEEESCCSSSSSCC-SHHHHSSSEEECSSCSSCCHHHHHHHHHHHHHHHHHHHTTSCCTTBC-
T ss_pred ccCHHHHHHHHHcCCceEEEeCCcCCCCCCc-cchhhCCCEEEcCcCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence 9999999999999999999999999999864 699999999999999999999999999999999999999999999887
No 7
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=7.7e-65 Score=534.88 Aligned_cols=274 Identities=30% Similarity=0.458 Sum_probs=256.9
Q ss_pred hcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcCcccCccChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchH
Q 007512 95 KISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVA 174 (600)
Q Consensus 95 ~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~d~iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~ 174 (600)
.++++|++++++.+++++++|+++ |+||+|+++|+|+||||+++|+++||.|+|+||+++.+||||+++++|+++|+++
T Consensus 39 ~l~~ad~i~v~~~~~i~~~~l~~~-p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~ 117 (334)
T 3kb6_A 39 ELKKAELISVFVYDKLTEELLSKM-PRLKLIHTRSVGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLK 117 (334)
T ss_dssp HHHHCSEEEECTTSCBCHHHHHTC-TTCCEEEESSSCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHH
T ss_pred HhcCCCEEEEeCCCCCCHHHHhcC-CCCcEEEECCcccchhcHHHHHHCCCEEEECCCcCcHHHHHHHHHHHHHHhhccc
Confidence 457899999999899999999998 6999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCccccc-cccceeccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCC
Q 007512 175 QADASVKAGKWQRN-KYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATAD 253 (600)
Q Consensus 175 ~~~~~~~~g~W~~~-~~~g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aD 253 (600)
++++.++.|.|.+. ...|.+++|||+||||+|+||+.+|+++++|||+|++|||+... ...+.++.++++++++++||
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~-~~~~~~~~~~~l~ell~~sD 196 (334)
T 3kb6_A 118 RIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKRE-DLKEKGCVYTSLDELLKESD 196 (334)
T ss_dssp HHHHHHHTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHTTCEECCHHHHHHHCS
T ss_pred cccccccccccccccccccceecCcEEEEECcchHHHHHHHhhcccCceeeecCCccch-hhhhcCceecCHHHHHhhCC
Confidence 99999999998754 35689999999999999999999999999999999999998643 34567888899999999999
Q ss_pred EEEEecCCCccccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCceEEEEeccCCCCCCCCC----------
Q 007512 254 FISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRVAQAALDVFTEEPPPADS---------- 323 (600)
Q Consensus 254 vV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~---------- 323 (600)
+|++|||+|++|+++||++.|++||+|++|||+|||++||++||++||++|+|+||+||||+.||++.++
T Consensus 197 ivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~ 276 (334)
T 3kb6_A 197 VISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDK 276 (334)
T ss_dssp EEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHH
T ss_pred EEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCCCcccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999986555
Q ss_pred -----ccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCcccc
Q 007512 324 -----KLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGELAATAVN 370 (600)
Q Consensus 324 -----~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~~vn 370 (600)
|||.+|||++|||+|++|.|++++++..+++|+.+|++|+.....+|
T Consensus 277 ~~~~~~L~~~~nvilTPHia~~T~ea~~~~~~~~~~ni~~~l~Ge~~~~~~n 328 (334)
T 3kb6_A 277 NLKILELACKDNVIITPHIAYYTDKSLERIREETVKVVKAFVKGDLEQIKGN 328 (334)
T ss_dssp HHHHHHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCGGGGGGG
T ss_pred cccchhhccCCCEEECCchhhChHHHHHHHHHHHHHHHHHHHcCCCCcCCCC
Confidence 68899999999999999999999999999999999999987765544
No 8
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=100.00 E-value=3e-64 Score=530.39 Aligned_cols=311 Identities=27% Similarity=0.373 Sum_probs=281.9
Q ss_pred CeEEEecCCC--HhHHHHhcccCcEEEccCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcCcccCccC
Q 007512 59 PTVLIAEKLG--QAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVD 136 (600)
Q Consensus 59 ~~ilv~~~l~--~~~~~~l~~~~~v~~~~~~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~d~iD 136 (600)
|||++.+.-. .+.++.+.+..++++......+|+.+.++++|++++++.+++++++++++ |+||+|++.|+|+||||
T Consensus 1 Mki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~d~li~~~~~~i~~~~l~~~-~~Lk~I~~~~~G~d~id 79 (334)
T 2pi1_A 1 MNVLFTSVPQEDVPFYQEALKDLSLKIYTTDVSKVPENELKKAELISVFVYDKLTEELLSKM-PRLKLIHTRSVGFDHID 79 (334)
T ss_dssp CEEEECSCCTTHHHHHHHHTTTSEEEECSSCGGGSCHHHHHHCSEEEECTTSCBCHHHHTTC-TTCCEEEESSSCCTTBC
T ss_pred CEEEEEccChhhHHHHHHHhhcCCEEEECCCCcHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCeEEEECCccccccC
Confidence 4788766432 23344444334666643334567888899999999987789999999998 58999999999999999
Q ss_pred hhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccc-cccceeccCCEEEEEecChhHHHHHHH
Q 007512 137 LAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRN-KYVGVSLVGKTLAVLGFGKVGSEVARR 215 (600)
Q Consensus 137 ~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~-~~~g~~l~gktiGIIGlG~IG~~vA~~ 215 (600)
+++|+++||.|+|+|++++.+||||++++||+++|+++++++.+++|.|.+. ...|.+|+|+||||||+|+||+++|++
T Consensus 80 ~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~ 159 (334)
T 2pi1_A 80 LDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMY 159 (334)
T ss_dssp HHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHH
T ss_pred HHHHHHCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999876 557899999999999999999999999
Q ss_pred hhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCccccHH
Q 007512 216 AKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEE 295 (600)
Q Consensus 216 l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~ 295 (600)
+++|||+|++||++...... +.|+..+++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|++
T Consensus 160 l~~~G~~V~~~d~~~~~~~~-~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~ 238 (334)
T 2pi1_A 160 GLAFGMKVLCYDVVKREDLK-EKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTD 238 (334)
T ss_dssp HHHTTCEEEEECSSCCHHHH-HTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHH
T ss_pred HHHCcCEEEEECCCcchhhH-hcCceecCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHH
Confidence 99999999999998865432 56888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHhcCCceEEEEeccCCCCC---------------CCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 007512 296 ALVRALDSGRVAQAALDVFTEEPP---------------PADSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGAL 360 (600)
Q Consensus 296 aL~~aL~~g~i~ga~lDv~~~EP~---------------~~~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l 360 (600)
+|+++|++|+|+||++|||+.||+ +.++|||++||+++|||+|++|.|+++++...+++|+.+|+
T Consensus 239 aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~ 318 (334)
T 2pi1_A 239 ALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIITPHIAYYTDKSLERIREETVKVVKAFV 318 (334)
T ss_dssp HHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCceEEEeecCCCCCCccccccccccccccCccCChhhcCCCEEECCccccChHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999997 56889999999999999999999999999999999999999
Q ss_pred cCCCCCccccC
Q 007512 361 KGELAATAVNA 371 (600)
Q Consensus 361 ~g~~~~~~vn~ 371 (600)
+|+.+.+.||.
T Consensus 319 ~g~~~~~~Vn~ 329 (334)
T 2pi1_A 319 KGDLEQIKGNF 329 (334)
T ss_dssp HTCGGGGGGGE
T ss_pred cCCCCCceECc
Confidence 99999999884
No 9
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=100.00 E-value=1.8e-63 Score=527.48 Aligned_cols=317 Identities=28% Similarity=0.460 Sum_probs=288.5
Q ss_pred CeEEEecCCCHhH-----HHHhcccCcEEEccC--CCHhHHhhhcCCceEEEE-cCCCCCCHHHHhccCCCceEEEEcCc
Q 007512 59 PTVLIAEKLGQAG-----LDLLNEFANVDCAYN--LSPEELCTKISLCDALIV-RSGTKVNRDVFESSAGRLKVVGRAGV 130 (600)
Q Consensus 59 ~~ilv~~~l~~~~-----~~~l~~~~~v~~~~~--~~~~el~~~i~~~d~li~-~~~~~~~~~~l~~~~~~Lk~I~~~g~ 130 (600)
|||++++.+.... ++.|+. .++.+... .+++++.+.++++|++++ ++.+++++++++++ |+||+|++.|+
T Consensus 3 mki~~~d~~~~~~~~~~~~~~l~~-~~v~~~~~~~~~~~~l~~~~~~ad~li~~~~~~~~~~~~l~~~-~~Lk~I~~~g~ 80 (352)
T 3gg9_A 3 LKIAVLDDYQDAVRKLDCFSLLQD-HEVKVFNNTVKGVGQLAARVADVEALVLIRERTRVTRQLLDRL-PKLKIISQTGR 80 (352)
T ss_dssp CEEEECCCTTCCGGGSGGGGGGTT-SEEEECCSCCCSHHHHHHHTTTCSEEEECTTSSCBCHHHHTTC-TTCCEEEESSC
T ss_pred eEEEEEcCccccchhhhhhhhhcC-ceEEEecCCCCCHHHHHHHhcCCeEEEEeCCCCCCCHHHHhhC-CCCeEEEEeCc
Confidence 7999999876432 334443 56665433 367889999999999998 66789999999998 69999999999
Q ss_pred cc----CccChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCcccccc----------ccceecc
Q 007512 131 GI----DNVDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNK----------YVGVSLV 196 (600)
Q Consensus 131 G~----d~iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~----------~~g~~l~ 196 (600)
|+ ||||+++|+++||.|+|+||+ +.+||||++++||+++|+++.+++.+++|.|.+.. ..|.+|+
T Consensus 81 G~~~~~d~id~~~a~~~gI~V~n~pg~-~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~ 159 (352)
T 3gg9_A 81 VSRDAGGHIDLEACTDKGVVVLEGKGS-PVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLK 159 (352)
T ss_dssp CCCSSSCSBCHHHHHHHTCEEECCCCC-SHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCT
T ss_pred ccCCccCcccHHHHHhCCeEEEECCCC-cHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCC
Confidence 99 999999999999999999999 99999999999999999999999999999998642 3588999
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEecCCCccccccccHhHhc
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLV-SFDEAIATADFISLHMPLTPATSKVLNDETFG 275 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~ 275 (600)
||||||||+|.||+++|+++++|||+|++||++...+.+.+.|+..+ ++++++++||+|++|+|++++|+++++++.|+
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~ 239 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSKERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLT 239 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHT
T ss_pred CCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCHHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHh
Confidence 99999999999999999999999999999999865556677888877 99999999999999999999999999999999
Q ss_pred cCCCceEEEEccCCccccHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHH
Q 007512 276 KMKKGVRIINVARGGVIDEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEA 355 (600)
Q Consensus 276 ~mk~gailvNvarg~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~ 355 (600)
.||+|++|||+|||+++|+++|+++|++|+|+||++|||+.||++.++|||++||+++|||+|++|.|+++++...+++|
T Consensus 240 ~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~n 319 (352)
T 3gg9_A 240 RMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQGHTLLRMENCICTPHIGYVERESYEMYFGIAFQN 319 (352)
T ss_dssp TSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHH
T ss_pred hCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCCCCChhhcCCCEEECCCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCccccCCCCChhhh
Q 007512 356 VVGALKGELAATAVNAPMVPAEVL 379 (600)
Q Consensus 356 l~~~l~g~~~~~~vn~~~i~~~~~ 379 (600)
+.+|++|++ .+.||+..+...+.
T Consensus 320 i~~~~~G~p-~~~Vn~~~~~~~~~ 342 (352)
T 3gg9_A 320 ILDILQGNV-DSVANPTALAPALI 342 (352)
T ss_dssp HHHHHTTCC-TTBSCGGGSSCTTT
T ss_pred HHHHHcCCC-CcccCHHHHHHHHH
Confidence 999999965 68999776666544
No 10
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=100.00 E-value=5e-63 Score=521.04 Aligned_cols=310 Identities=48% Similarity=0.745 Sum_probs=283.5
Q ss_pred CCCCeEEEecCCCHhHHHHhccc-CcEEEccCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcCcccCc
Q 007512 56 SSKPTVLIAEKLGQAGLDLLNEF-ANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDN 134 (600)
Q Consensus 56 ~~~~~ilv~~~l~~~~~~~l~~~-~~v~~~~~~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~d~ 134 (600)
++++||++++.+.+...+.|++. .++.+....+.+++.+.++++|++++++.+++++++++++ |+||||++.|+|+||
T Consensus 24 ~~~~~vli~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~~~~~~d~li~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~ 102 (335)
T 2g76_A 24 ANLRKVLISDSLDPCCRKILQDGGLQVVEKQNLSKEELIAELQDCEGLIVRSATKVTADVINAA-EKLQVVGRAGTGVDN 102 (335)
T ss_dssp --CCEEEECSCCCHHHHHHHHHHTCEEEECCSCCHHHHHHHGGGCSEEEECSSSCBCHHHHHHC-SSCCEEEESSSSCTT
T ss_pred ccceEEEEcCCCCHHHHHHHHhCCCEEEECCCCCHHHHHHHhcCceEEEEcCCCCCCHHHHhhC-CCCcEEEECCCCcch
Confidence 45679999999999988888875 3665555567889999999999999988788999999997 699999999999999
Q ss_pred cChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecChhHHHHHH
Q 007512 135 VDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVAR 214 (600)
Q Consensus 135 iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~IG~~vA~ 214 (600)
||+++|+++||.|+|+|++|+.+||||++++||+++|+++++++.+++|.|.+..+.+.++.|+||||||+|.||+++|+
T Consensus 103 id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~ 182 (335)
T 2g76_A 103 VDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVAT 182 (335)
T ss_dssp BCHHHHHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHH
T ss_pred hChHHHHhCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987656789999999999999999999999
Q ss_pred HhhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCccccH
Q 007512 215 RAKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDE 294 (600)
Q Consensus 215 ~l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde 294 (600)
++++|||+|++||++.....+.+.|+...++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+
T Consensus 183 ~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~ 262 (335)
T 2g76_A 183 RMQSFGMKTIGYDPIISPEVSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDE 262 (335)
T ss_dssp HHHTTTCEEEEECSSSCHHHHHHTTCEECCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCH
T ss_pred HHHHCCCEEEEECCCcchhhhhhcCceeCCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCH
Confidence 99999999999999886666777888778999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCc
Q 007512 295 EALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGELAAT 367 (600)
Q Consensus 295 ~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~ 367 (600)
++|+++|++|+|+||++|||+.||+ +++|||++||+++|||++++|.|+++++...+++|+.+|++|+++.+
T Consensus 263 ~aL~~aL~~g~i~gA~lDV~~~EP~-~~~~L~~~~nvilTPH~~~~t~e~~~~~~~~~~~nl~~~~~g~~~~n 334 (335)
T 2g76_A 263 GALLRALQSGQCAGAALDVFTEEPP-RDRALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGKSLTG 334 (335)
T ss_dssp HHHHHHHHHTSEEEEEESCCSSSSC-SCCHHHHSTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHhCCccEEEEeecCCCCC-CCchHHhCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 9999999999999999999999994 68999999999999999999999999999999999999999987654
No 11
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=1.1e-63 Score=522.89 Aligned_cols=311 Identities=23% Similarity=0.298 Sum_probs=279.1
Q ss_pred CCCCeEEEecCCCHhHHHHh-ccc-CcEEEccCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcCcccC
Q 007512 56 SSKPTVLIAEKLGQAGLDLL-NEF-ANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGID 133 (600)
Q Consensus 56 ~~~~~ilv~~~l~~~~~~~l-~~~-~~v~~~~~~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~d 133 (600)
.+|+|||+++++.+...+.| ++. .++++....+.+++.+.+.++|+++++. ++++++++++ |+||||++.|+|+|
T Consensus 3 ~~~mkili~~~~~~~~~~~L~~~~~p~~~~~~~~~~~~~~~~~~~ad~li~~~--~~~~~~l~~~-~~Lk~I~~~~~G~d 79 (324)
T 3hg7_A 3 LSQRTLLLLSQDNAHYERLLKAAHLPHLRILRADNQSDAEKLIGEAHILMAEP--ARAKPLLAKA-NKLSWFQSTYAGVD 79 (324)
T ss_dssp -CCEEEEEESTTHHHHHHHHHHSCCTTEEEEECSSHHHHHHHGGGCSEEEECH--HHHGGGGGGC-TTCCEEEESSSCCG
T ss_pred ccccEEEEecCCCHHHHHHHhhccCCCeEEEeCCChhHHHHHhCCCEEEEECC--CCCHHHHhhC-CCceEEEECCCCCC
Confidence 35699999999999999999 554 4777766567788889999999999853 4667889987 69999999999999
Q ss_pred ccChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecChhHHHHH
Q 007512 134 NVDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVA 213 (600)
Q Consensus 134 ~iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~IG~~vA 213 (600)
|||++++++ ||.|+|+||+++.+||||++++||+++|+++.+++.+++|+|.+. .+.+++|+||||||+|.||+++|
T Consensus 80 ~id~~~~~~-gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~--~~~~l~g~tvGIIGlG~IG~~vA 156 (324)
T 3hg7_A 80 VLLDARCRR-DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSH--PYQGLKGRTLLILGTGSIGQHIA 156 (324)
T ss_dssp GGSCTTSCC-SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC--CCCCSTTCEEEEECCSHHHHHHH
T ss_pred ccChHHHhC-CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCC--CCcccccceEEEEEECHHHHHHH
Confidence 999998865 999999999999999999999999999999999999999999864 57899999999999999999999
Q ss_pred HHhhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCcccc
Q 007512 214 RRAKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVID 293 (600)
Q Consensus 214 ~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivd 293 (600)
+++++|||+|++||++.........+....++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|
T Consensus 157 ~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vd 236 (324)
T 3hg7_A 157 HTGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAIN 236 (324)
T ss_dssp HHHHHTTCEEEEECSSCCCCTTCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBC
T ss_pred HHHHhCCCEEEEEcCChHHhhhhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhC
Confidence 99999999999999886322111122345689999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCccccCCC
Q 007512 294 EEALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGELAATAVNAPM 373 (600)
Q Consensus 294 e~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~~vn~~~ 373 (600)
+++|+++|++|+|+||++|||+.||++.++|||++||+++|||+|++|.+ +++...+++|+.+|++|+++.+.||+..
T Consensus 237 e~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~--~~~~~~~~~nl~~~~~G~~~~~~V~~~~ 314 (324)
T 3hg7_A 237 EGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLIITPHNSAYSFP--DDVAQIFVRNYIRFIDGQPLDGKIDFDK 314 (324)
T ss_dssp HHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTEEECCSCSSCCCH--HHHHHHHHHHHHHHHTTCCCTTBCCCC-
T ss_pred HHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCEEEeCCCccccHH--HHHHHHHHHHHHHHHcCCCCcceEChhh
Confidence 99999999999999999999999999999999999999999999999976 4688999999999999999999999764
Q ss_pred C
Q 007512 374 V 374 (600)
Q Consensus 374 i 374 (600)
.
T Consensus 315 ~ 315 (324)
T 3hg7_A 315 G 315 (324)
T ss_dssp -
T ss_pred h
Confidence 4
No 12
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=3.4e-63 Score=526.43 Aligned_cols=314 Identities=20% Similarity=0.288 Sum_probs=277.9
Q ss_pred CCCCCCeEEEecCC--------CHhHHHHhcccCcEEEccCCCHhHHhh-hcCCceEEEEcCCCCCCHHHHhccCCCceE
Q 007512 54 GISSKPTVLIAEKL--------GQAGLDLLNEFANVDCAYNLSPEELCT-KISLCDALIVRSGTKVNRDVFESSAGRLKV 124 (600)
Q Consensus 54 ~~~~~~~ilv~~~l--------~~~~~~~l~~~~~v~~~~~~~~~el~~-~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~ 124 (600)
+.+..++++++++. .++.++.|++.+++......+.+|+.+ .+.++|+++. .+++++++++++ |+||+
T Consensus 23 m~~~~r~ivll~~~~~~~~~~~~~~~~~~L~~~~~v~~~~~~~~~e~~~~~~~~~~~i~~--~~~i~~~~l~~~-p~Lk~ 99 (365)
T 4hy3_A 23 MTNTERPLAISAPEPRSLDLIFSDEARAALHSKYEIVEADPENIAGLGDDILGRARYIIG--QPPLSAETLARM-PALRS 99 (365)
T ss_dssp -----CCEEEEECTTSCHHHHCCHHHHHHHHHHSEEEECCGGGGGGSCTTHHHHEEEEEE--CCCCCHHHHTTC-TTCCE
T ss_pred cccCCCCEEEEcCCcccccccCCHHHHHHHhCCcEEEECCCCChHHHHHHhhCCeEEEEe--CCCCCHHHHhhC-CCCeE
Confidence 34444556666665 566888998888887544445566554 3467888774 368999999998 69999
Q ss_pred EEEc-CcccCccChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCcc--ccc-cccceeccCCEE
Q 007512 125 VGRA-GVGIDNVDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKW--QRN-KYVGVSLVGKTL 200 (600)
Q Consensus 125 I~~~-g~G~d~iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W--~~~-~~~g~~l~gkti 200 (600)
|++. |+|+||||+++|+++||.|+|+|++|+.+||||++++||+++|+++++++.+++|+| .+. .+.+.+|+||||
T Consensus 100 I~~~~~~G~d~iD~~~a~~~GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktv 179 (365)
T 4hy3_A 100 ILNVESNLLNNMPYEVLFQRGIHVVTTGQVFAEPVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEI 179 (365)
T ss_dssp EECCSSSCCSCSCTTHHHHSCCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEE
T ss_pred EEEecccccCcccHHHHhcCCeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEE
Confidence 9975 899999999999999999999999999999999999999999999999999999995 432 346889999999
Q ss_pred EEEecChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCc
Q 007512 201 AVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKG 280 (600)
Q Consensus 201 GIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~g 280 (600)
||||+|.||+++|+++++|||+|++||++.+.+.+.+.|+...++++++++||+|++|+|++++|+++++++.|+.||+|
T Consensus 180 GIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~g 259 (365)
T 4hy3_A 180 GIVGFGDLGKALRRVLSGFRARIRVFDPWLPRSMLEENGVEPASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRG 259 (365)
T ss_dssp EEECCSHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHTTCEECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTT
T ss_pred EEecCCcccHHHHHhhhhCCCEEEEECCCCCHHHHhhcCeeeCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCC
Confidence 99999999999999999999999999999876667788988889999999999999999999999999999999999999
Q ss_pred eEEEEccCCccccHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 007512 281 VRIINVARGGVIDEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGAL 360 (600)
Q Consensus 281 ailvNvarg~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l 360 (600)
++|||+|||+++|+++|+++|++|+|+ |++|||+.||++.++|||++||+++|||+|++|.|++++++..+++|+.+|+
T Consensus 260 ailIN~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~ 338 (365)
T 4hy3_A 260 AAFILLSRADVVDFDALMAAVSSGHIV-AASDVYPEEPLPLDHPVRSLKGFIRSAHRAGALDSAFKKMGDMVLEDMDLMD 338 (365)
T ss_dssp CEEEECSCGGGSCHHHHHHHHHTTSSE-EEESCCSSSSCCTTCGGGTCTTEEECCSCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEECcCCchhCHHHHHHHHHcCCce-EEeeCCCCCCCCCCChhhcCCCEEECCccccCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 9999999999989999999999999999999999999999999999999999
Q ss_pred cCCCCCccccC
Q 007512 361 KGELAATAVNA 371 (600)
Q Consensus 361 ~g~~~~~~vn~ 371 (600)
+|+++.+.+|.
T Consensus 339 ~G~~~~~~vn~ 349 (365)
T 4hy3_A 339 RGLPPMRCKRA 349 (365)
T ss_dssp TTCCCCSSEEC
T ss_pred cCCCccccccc
Confidence 99999999986
No 13
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=100.00 E-value=3.8e-63 Score=522.73 Aligned_cols=312 Identities=21% Similarity=0.317 Sum_probs=273.4
Q ss_pred CCeEEEecCCC--HhHHHHh-cccC-cEEEccCCCHhHHhhhcCCceEEEEcCCCCCCHH-HHhccC-CCceEEEEcCcc
Q 007512 58 KPTVLIAEKLG--QAGLDLL-NEFA-NVDCAYNLSPEELCTKISLCDALIVRSGTKVNRD-VFESSA-GRLKVVGRAGVG 131 (600)
Q Consensus 58 ~~~ilv~~~l~--~~~~~~l-~~~~-~v~~~~~~~~~el~~~i~~~d~li~~~~~~~~~~-~l~~~~-~~Lk~I~~~g~G 131 (600)
++||++.+..+ .+.++.+ ++.+ ++.+......+|+.+.++++|++++++.++++++ +|++++ ++||+|++.|+|
T Consensus 1 Mmki~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G 80 (343)
T 2yq5_A 1 MTKIAMYNVSPIEVPYIEDWAKKNDVEIKTTDQALTSATVDLAEGCSSVSLKPLGPVDEEVVYQKLSEYGVKCIGLRIVG 80 (343)
T ss_dssp -CEEEEESCCGGGHHHHHHHHHHHTCEEEEESSCCSTTGGGGGTTCSEEEECCSSCBCCHHHHHHHHHTTCCEEEESSSC
T ss_pred CceEEEEecCcccHHHHHHHHHhCCeEEEECCCCCCHHHHHHhcCCcEEEEcCCCCcCHHHHHHhccccCceEEEECcee
Confidence 47899988332 2233333 3332 5655444334678889999999999988899999 999873 369999999999
Q ss_pred cCccChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHH-cCcccc-ccccceeccCCEEEEEecChhH
Q 007512 132 IDNVDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVK-AGKWQR-NKYVGVSLVGKTLAVLGFGKVG 209 (600)
Q Consensus 132 ~d~iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~-~g~W~~-~~~~g~~l~gktiGIIGlG~IG 209 (600)
+||||+++|+++||.|+|+|++++.+||||+++++|+++|+++.+++.++ +|+|.+ ..+.+.+|+||||||||+|+||
T Consensus 81 ~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG 160 (343)
T 2yq5_A 81 FNTINFDWTKKYNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIG 160 (343)
T ss_dssp CTTBCSSTTCC--CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHH
T ss_pred ecccchhHHHhCCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHH
Confidence 99999999999999999999999999999999999999999999999999 998754 3467899999999999999999
Q ss_pred HHHHHHhhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCC
Q 007512 210 SEVARRAKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARG 289 (600)
Q Consensus 210 ~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg 289 (600)
+++|+++++|||+|++||++.... .+.++.++++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||
T Consensus 161 ~~vA~~l~~~G~~V~~~d~~~~~~--~~~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg 238 (343)
T 2yq5_A 161 SAVAEIFSAMGAKVIAYDVAYNPE--FEPFLTYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARG 238 (343)
T ss_dssp HHHHHHHHHTTCEEEEECSSCCGG--GTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCG
T ss_pred HHHHHHHhhCCCEEEEECCChhhh--hhccccccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCC
Confidence 999999999999999999987542 233566779999999999999999999999999999999999999999999999
Q ss_pred ccccHHHHHHhHhcCCceEEEEeccCCCC--CCCC-----------CccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHH
Q 007512 290 GVIDEEALVRALDSGRVAQAALDVFTEEP--PPAD-----------SKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAV 356 (600)
Q Consensus 290 ~ivde~aL~~aL~~g~i~ga~lDv~~~EP--~~~~-----------~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l 356 (600)
+++|+++|+++|++|+|+||+||||++|| ++.+ +|||++|||++|||+|++|.|+++++...+++|+
T Consensus 239 ~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~ni 318 (343)
T 2yq5_A 239 ELVDTGALIKALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVVITPHSAFYTETSIRNMVQICLTDQ 318 (343)
T ss_dssp GGBCHHHHHHHHHHTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTEEECSSCTTCBHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHcCCCcEEEecccccCCCccccccccccccccchhHHhcCCCEEECCccccchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 4444 4899999999999999999999999999999999
Q ss_pred HHHHcCCCCCccccC
Q 007512 357 VGALKGELAATAVNA 371 (600)
Q Consensus 357 ~~~l~g~~~~~~vn~ 371 (600)
.+|++|+.+.+.||+
T Consensus 319 ~~~l~g~~~~~~v~~ 333 (343)
T 2yq5_A 319 LTIAKGGRPRSIVNL 333 (343)
T ss_dssp HHHHTTCCCTTBC--
T ss_pred HHHHcCCCCCceECC
Confidence 999999999999985
No 14
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=100.00 E-value=7.1e-63 Score=522.44 Aligned_cols=315 Identities=28% Similarity=0.410 Sum_probs=286.9
Q ss_pred CCCCCeEEEecCCCHhHHHHhcccC-cEEEccC--CCHhHHhhhcCCceEEEEcCC--CCCCHHHHhccCCCceEEEEcC
Q 007512 55 ISSKPTVLIAEKLGQAGLDLLNEFA-NVDCAYN--LSPEELCTKISLCDALIVRSG--TKVNRDVFESSAGRLKVVGRAG 129 (600)
Q Consensus 55 ~~~~~~ilv~~~l~~~~~~~l~~~~-~v~~~~~--~~~~el~~~i~~~d~li~~~~--~~~~~~~l~~~~~~Lk~I~~~g 129 (600)
.+.+|++|..+.......++|++.+ ++.+... .+.+++.+.++++|++|+++. .++++++++++ |+||+|+++|
T Consensus 16 ~~~~~~~lg~~~~~l~~~~~L~~~g~ev~~~~~~~~~~~~~~~~~~~ad~li~~~~~~~~~~~~~l~~~-p~Lk~i~~~g 94 (351)
T 3jtm_A 16 ATKNPNFLGCVENALGIRDWLESQGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKA-KNLKLLLTAG 94 (351)
T ss_dssp HHHCTTCCSSTTTGGGCHHHHHHTTCEEEEESCCSSTTSHHHHHTTTCSEEEECTTSCCCBCHHHHHHC-SSCCEEEESS
T ss_pred cccCCCEEEeccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHHHhCCCEEEEEccCCCCCCCHHHHhhC-CCCeEEEEeC
Confidence 4457888888877777788888764 6665432 245689999999999998753 56999999998 6999999999
Q ss_pred cccCccChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCcccccc--ccceeccCCEEEEEecCh
Q 007512 130 VGIDNVDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNK--YVGVSLVGKTLAVLGFGK 207 (600)
Q Consensus 130 ~G~d~iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~--~~g~~l~gktiGIIGlG~ 207 (600)
+|+||||+++|+++||.|+|+||+|+.+||||++++||+++|+++++++.+++|.|.+.. ..+.+|+|+||||||+|+
T Consensus 95 ~G~d~id~~~a~~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~ 174 (351)
T 3jtm_A 95 IGSDHIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGR 174 (351)
T ss_dssp SCCTTBCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSH
T ss_pred eeecccCHHHHHhcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCH
Confidence 999999999999999999999999999999999999999999999999999999998642 247899999999999999
Q ss_pred hHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc-CHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEE
Q 007512 208 VGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV-SFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIIN 285 (600)
Q Consensus 208 IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvN 285 (600)
||+++|+++++|||+|++||++. +.+.+.+.|+..+ ++++++++||+|++|+|++++|+++++++.|+.||+|++|||
T Consensus 175 IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN 254 (351)
T 3jtm_A 175 IGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVN 254 (351)
T ss_dssp HHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEE
Confidence 99999999999999999999986 5666777888776 899999999999999999999999999999999999999999
Q ss_pred ccCCccccHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC-
Q 007512 286 VARGGVIDEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGEL- 364 (600)
Q Consensus 286 varg~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~~- 364 (600)
+|||+++|+++|+++|++|+|+||++|||+.||++.++|||++||+++|||+|+.|.|++.+++..+++|+.+|++|+.
T Consensus 255 ~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~nl~~~~~g~~~ 334 (351)
T 3jtm_A 255 NARGAIMERQAVVDAVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSGTTIDAQLRYAAGTKDMLERYFKGEDF 334 (351)
T ss_dssp CSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCGGGSHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CcCchhhCHHHHHHHHHhCCccEEEeCCCCCCCCCCCChhhcCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred -CCcccc
Q 007512 365 -AATAVN 370 (600)
Q Consensus 365 -~~~~vn 370 (600)
+.|.++
T Consensus 335 ~~~~~i~ 341 (351)
T 3jtm_A 335 PTENYIV 341 (351)
T ss_dssp CGGGEEE
T ss_pred CCceEEe
Confidence 444443
No 15
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=4.7e-62 Score=508.65 Aligned_cols=305 Identities=41% Similarity=0.674 Sum_probs=283.5
Q ss_pred CCCeEEEecCCCHhHHHHhccc-CcEEEccCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcCcccCcc
Q 007512 57 SKPTVLIAEKLGQAGLDLLNEF-ANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNV 135 (600)
Q Consensus 57 ~~~~ilv~~~l~~~~~~~l~~~-~~v~~~~~~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~d~i 135 (600)
.||||++++.+.++..+.|++. .++.+....+.+++.+.+.++|++++++.+++++++++++ |+||+|++.|+|+|||
T Consensus 2 ~~~~il~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~i 80 (307)
T 1wwk_A 2 KRMKVLVAAPLHEKAIQVLKDAGLEVIYEEYPDEDRLVELVKDVEAIIVRSKPKVTRRVIESA-PKLKVIARAGVGLDNI 80 (307)
T ss_dssp --CEEEECSCCCHHHHHHHHHTTCEEEECSSCCHHHHHHHSTTCSEEEESSCSCBCHHHHTTC-TTCCEEEESSSCCTTB
T ss_pred CceEEEEeCCCCHHHHHHHHhCCeEEEeCCCCCHHHHHHHhcCCEEEEEcCCCCCCHHHHhhC-CCCeEEEECCcccccc
Confidence 3689999999998888888774 3454444467888999999999999987667999999987 6999999999999999
Q ss_pred ChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecChhHHHHHHH
Q 007512 136 DLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARR 215 (600)
Q Consensus 136 D~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~IG~~vA~~ 215 (600)
|+++|+++||.|+|+||+|+.+||||++++||+++|+++.+++.+++|.|.+..+.+.++.|+||||||+|.||+++|++
T Consensus 81 d~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~ 160 (307)
T 1wwk_A 81 DVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKI 160 (307)
T ss_dssp CHHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999864457889999999999999999999999
Q ss_pred hhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCccccHH
Q 007512 216 AKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEE 295 (600)
Q Consensus 216 l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~ 295 (600)
+++|||+|++||++...+.+.+.|+...++++++++||+|++|+|++++|+++++++.|+.||+|++|||++||+++|++
T Consensus 161 l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~ 240 (307)
T 1wwk_A 161 ANALGMNILLYDPYPNEERAKEVNGKFVDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTN 240 (307)
T ss_dssp HHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHH
T ss_pred HHHCCCEEEEECCCCChhhHhhcCccccCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHH
Confidence 99999999999999866666778888789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcC
Q 007512 296 ALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKG 362 (600)
Q Consensus 296 aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g 362 (600)
+|.++|++|+|+||++|||+.||+++++|||+++|+++|||++++|.|+++++...+++|+.+|++|
T Consensus 241 aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~~nl~~~~~g 307 (307)
T 1wwk_A 241 ALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVVLTPHIGASTVEAQERAGVEVAEKVVKILKG 307 (307)
T ss_dssp HHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCEEECCccccCcHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999998899999999999999999999999999999999999999976
No 16
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=2.5e-63 Score=520.82 Aligned_cols=310 Identities=26% Similarity=0.359 Sum_probs=272.1
Q ss_pred CCeEEEecCCCHhHHHHhcccC-cEEEccCCCHhHHhhhcCCceEEEEcCCCCCCHHHH-hccCCCceEEEEcCcccCcc
Q 007512 58 KPTVLIAEKLGQAGLDLLNEFA-NVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVF-ESSAGRLKVVGRAGVGIDNV 135 (600)
Q Consensus 58 ~~~ilv~~~l~~~~~~~l~~~~-~v~~~~~~~~~el~~~i~~~d~li~~~~~~~~~~~l-~~~~~~Lk~I~~~g~G~d~i 135 (600)
++|||+++++.++.++.|++.+ ++++.... +...+.+.++|+++++. .++ +++| +++ |+||||+++|+|+|||
T Consensus 1 m~kil~~~~~~~~~~~~L~~~~~~~~~~~~~--~~~~~~~~~ad~l~~~~-~~~-~~~l~~~~-~~Lk~I~~~~~G~d~i 75 (324)
T 3evt_A 1 MSLVLMAQATKPEQLQQLQTTYPDWTFKDAA--AVTAADYDQIEVMYGNH-PLL-KTILARPT-NQLKFVQVISAGVDYL 75 (324)
T ss_dssp -CEEEECSCCCHHHHHHHHHHCTTCEEEETT--SCCTTTGGGEEEEESCC-THH-HHHHHSTT-CCCCEEECSSSCCTTS
T ss_pred CcEEEEecCCCHHHHHHHHhhCCCeEEecCC--ccChHHhCCcEEEEECC-cCh-HHHHHhhC-CCceEEEECCcccccc
Confidence 4789999999999999998754 44432211 11123567899988754 457 8999 666 6999999999999999
Q ss_pred ChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHH-HHHHHcCccccccccceeccCCEEEEEecChhHHHHHH
Q 007512 136 DLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQA-DASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVAR 214 (600)
Q Consensus 136 D~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~-~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~IG~~vA~ 214 (600)
|+++|+++||.|+|+||+++.+||||++++||+++|+++++ ++.+++|+|.+.. .+.+++||||||||+|.||+++|+
T Consensus 76 d~~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~-~~~~l~gktvGIiGlG~IG~~vA~ 154 (324)
T 3evt_A 76 PLKALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPM-TTSTLTGQQLLIYGTGQIGQSLAA 154 (324)
T ss_dssp CHHHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSS-CCCCSTTCEEEEECCSHHHHHHHH
T ss_pred CHHHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCC-CCccccCCeEEEECcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999 9999999998754 588999999999999999999999
Q ss_pred HhhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCccccH
Q 007512 215 RAKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDE 294 (600)
Q Consensus 215 ~l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde 294 (600)
++++|||+|++||++..........+...++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+
T Consensus 155 ~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~ 234 (324)
T 3evt_A 155 KASALGMHVIGVNTTGHPADHFHETVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDT 234 (324)
T ss_dssp HHHHTTCEEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCH
T ss_pred HHHhCCCEEEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhH
Confidence 99999999999998763221111123345899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCC-CCCccccCCC
Q 007512 295 EALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGE-LAATAVNAPM 373 (600)
Q Consensus 295 ~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~-~~~~~vn~~~ 373 (600)
++|+++|++|+|+||++|||+.||++.++|||++|||++|||+|++|.|+++++...+++|+.+|++|+ ++.|.||...
T Consensus 235 ~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~l~~~~~~~n~V~~~~ 314 (324)
T 3evt_A 235 TALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVLITPHISGQIAHFRATVFPIFAANFAQFVKDGTLVRNQVDLNR 314 (324)
T ss_dssp HHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSEEECCSCTTCCCCHHHHHHHHHHHHHHHHHHHSCCCSCBCC---
T ss_pred HHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCEEEcCccccChHHHHHHHHHHHHHHHHHHHhCCCCCCceECccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999754 6789998653
No 17
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=100.00 E-value=1.8e-60 Score=497.87 Aligned_cols=305 Identities=36% Similarity=0.531 Sum_probs=283.7
Q ss_pred CCCeEEEecCCCHhHHHHhcccC-cEEEccCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcCcccCcc
Q 007512 57 SKPTVLIAEKLGQAGLDLLNEFA-NVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNV 135 (600)
Q Consensus 57 ~~~~ilv~~~l~~~~~~~l~~~~-~v~~~~~~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~d~i 135 (600)
.++||++++.+.+...+.|++.+ ++.+....+.+++.+.++++|++++++.+++++++++++ |+||+|++.|+|+|||
T Consensus 4 ~~mkil~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~i 82 (313)
T 2ekl_A 4 YTVKALITDPIDEILIKTLREKGIQVDYMPEISKEELLNIIGNYDIIVVRSRTKVTKDVIEKG-KKLKIIARAGIGLDNI 82 (313)
T ss_dssp CCCEEEECSCCCHHHHHHHHHTTCEEEECTTCCHHHHHHHGGGCSEEEECSSSCBCHHHHHHC-TTCCEEEECSSCCTTB
T ss_pred cceEEEEECCCCHHHHHHHHhCCcEEEeCCCCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCeEEEEcCCCCCcc
Confidence 35789999999998888888753 554444567889999999999999987778999999997 6999999999999999
Q ss_pred ChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecChhHHHHHHH
Q 007512 136 DLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARR 215 (600)
Q Consensus 136 D~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~IG~~vA~~ 215 (600)
|+++|+++||.|+|+||+|+.+||||++++||+++|+++++++.+++|.|. .+.+.++.|+||||||+|.||+++|++
T Consensus 83 d~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~--~~~~~~l~g~~vgIIG~G~IG~~~A~~ 160 (313)
T 2ekl_A 83 DTEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFK--KIEGLELAGKTIGIVGFGRIGTKVGII 160 (313)
T ss_dssp CHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCC--CCCCCCCTTCEEEEESCSHHHHHHHHH
T ss_pred CHHHHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCC--CCCCCCCCCCEEEEEeeCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999996 346889999999999999999999999
Q ss_pred hhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCccccHH
Q 007512 216 AKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEE 295 (600)
Q Consensus 216 l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~ 295 (600)
+++|||+|++||++.....+.+.|+...++++++++||+|++|+|++++|+++++++.++.||+|++|||++||+++|++
T Consensus 161 l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~ 240 (313)
T 2ekl_A 161 ANAMGMKVLAYDILDIREKAEKINAKAVSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGK 240 (313)
T ss_dssp HHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHH
T ss_pred HHHCCCEEEEECCCcchhHHHhcCceecCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHH
Confidence 99999999999998866566778887779999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHhcCCceEEEEeccCCCCCCCCC---ccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC
Q 007512 296 ALVRALDSGRVAQAALDVFTEEPPPADS---KLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGELA 365 (600)
Q Consensus 296 aL~~aL~~g~i~ga~lDv~~~EP~~~~~---~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~~~ 365 (600)
+|.++|++|+++||++|||+.||++ ++ |||++||+++|||++++|.|+++++...+++|+.+|++|++.
T Consensus 241 aL~~aL~~g~i~ga~lDv~~~eP~~-~~~~~~L~~~~nviltPH~~~~t~~~~~~~~~~~~~n~~~~~~g~~l 312 (313)
T 2ekl_A 241 ALLDYIKKGKVYAYATDVFWNEPPK-EEWELELLKHERVIVTTHIGAQTKEAQKRVAEMTTQNLLNAMKELGM 312 (313)
T ss_dssp HHHHHHHTTCEEEEEESCCSSSSCC-SHHHHHHHHSTTEEECCSCTTCSHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCcEEEEecCCCCCCC-CcccchHhhCCCEEECCccCcCcHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999987 66 999999999999999999999999999999999999998763
No 18
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=100.00 E-value=1e-60 Score=503.79 Aligned_cols=309 Identities=27% Similarity=0.380 Sum_probs=275.5
Q ss_pred CeEEEecC--CCHhHHHHhcccC---cEEEccCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCC--ceEEEEcCcc
Q 007512 59 PTVLIAEK--LGQAGLDLLNEFA---NVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGR--LKVVGRAGVG 131 (600)
Q Consensus 59 ~~ilv~~~--l~~~~~~~l~~~~---~v~~~~~~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~--Lk~I~~~g~G 131 (600)
|||+++.. ..++.++.|++.. ++.+......+++.+.+.++|++++++.+++++++++++ |+ ||+|++.|+|
T Consensus 2 mkil~~~~~~~~~~~~~~l~~~~p~~~v~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~~~Lk~I~~~~~G 80 (333)
T 1j4a_A 2 TKIFAYAIREDEKPFLKEWEDAHKDVEVEYTDKLLTPETVALAKGADGVVVYQQLDYIAETLQAL-ADNGITKMSLRNVG 80 (333)
T ss_dssp CEEEECSCCGGGHHHHHHHHHTCTTSEEEECSSCCCTTTGGGGTTCSEEEECCSSCBCHHHHHHH-HHTTCCEEEESSSC
T ss_pred cEEEEEecCccCHHHHHHHHhhCCCcEEEECCCCCcHHHHHHhcCCcEEEEcCCCCCCHHHHHhc-cccCCeEEEECCcc
Confidence 58888653 3445566666432 555443333457888899999999987778999999987 46 9999999999
Q ss_pred cCccChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecChhHHH
Q 007512 132 IDNVDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSE 211 (600)
Q Consensus 132 ~d~iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~IG~~ 211 (600)
+||||+++|+++||.|+|+||+++.+||||++++||+++|+++++++.+++|.|.+....+.++.|+||||||+|.||++
T Consensus 81 ~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~ 160 (333)
T 1j4a_A 81 VDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQV 160 (333)
T ss_dssp CTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHH
T ss_pred cccccHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999975556788999999999999999999
Q ss_pred HHHHhhcCCCEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCc
Q 007512 212 VARRAKGLGMHVIAHDPYAPADRARAIGVDLV-SFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGG 290 (600)
Q Consensus 212 vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ 290 (600)
+|+++++|||+|++||++.... +.+ .+..+ ++++++++||+|++|+|++++|+++++++.|+.||+|++|||++||+
T Consensus 161 ~A~~l~~~G~~V~~~d~~~~~~-~~~-~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~ 238 (333)
T 1j4a_A 161 FMQIMEGFGAKVITYDIFRNPE-LEK-KGYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGP 238 (333)
T ss_dssp HHHHHHHTTCEEEEECSSCCHH-HHH-TTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGG
T ss_pred HHHHHHHCCCEEEEECCCcchh-HHh-hCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCc
Confidence 9999999999999999987544 333 35666 89999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHhHhcCCceEEEEeccCCCC--CCCCC-----------ccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHH
Q 007512 291 VIDEEALVRALDSGRVAQAALDVFTEEP--PPADS-----------KLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVV 357 (600)
Q Consensus 291 ivde~aL~~aL~~g~i~ga~lDv~~~EP--~~~~~-----------~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~ 357 (600)
++|+++|+++|++|+|+||+||||+.|| ++.++ |||++|||++|||+|++|.|+++++...+++|+.
T Consensus 239 ~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~l~~~~~~~~~~~p~~~~L~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~ 318 (333)
T 1j4a_A 239 LVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVTPKTAFYTTHAVRNMVVKAFDNNL 318 (333)
T ss_dssp GBCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHHHHHHHCTTEEECSSCTTCBHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHhCCceEEEEecCCCCCCccccccccccCCccchhhHHhCCCEEECCccccCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 34433 6999999999999999999999999999999999
Q ss_pred HHHcCCCCCcccc
Q 007512 358 GALKGELAATAVN 370 (600)
Q Consensus 358 ~~l~g~~~~~~vn 370 (600)
+|++|+.+.+.||
T Consensus 319 ~~~~g~~~~~~v~ 331 (333)
T 1j4a_A 319 ELVEGKEAETPVK 331 (333)
T ss_dssp HHHTTCCCSSBCC
T ss_pred HHHcCCCCCcccc
Confidence 9999999888876
No 19
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=4.7e-60 Score=496.27 Aligned_cols=306 Identities=29% Similarity=0.472 Sum_probs=283.2
Q ss_pred CCeEEEecCCCHhHHHHhcccCcEEEcc---CCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCC-ceEEEEcCcccC
Q 007512 58 KPTVLIAEKLGQAGLDLLNEFANVDCAY---NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGR-LKVVGRAGVGID 133 (600)
Q Consensus 58 ~~~ilv~~~l~~~~~~~l~~~~~v~~~~---~~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~-Lk~I~~~g~G~d 133 (600)
+++|++++.+.++.++.|++..++.+.. ..+++++.+.+.++|++++++.+++++++++++ |+ ||||++.|+|+|
T Consensus 1 m~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~~Lk~I~~~~~G~d 79 (320)
T 1gdh_A 1 KKKILITWPLPEAAMARARESYDVIAHGDDPKITIDEMIETAKSVDALLITLNEKCRKEVIDRI-PENIKCISTYSIGFD 79 (320)
T ss_dssp CCEEEESSCCCHHHHHHHHTTSEEEECCSTTCCCHHHHHHHHTTCSEEEEETTSCBCHHHHHHS-CTTCCEEEEESSCCT
T ss_pred CcEEEEcCCCCHHHHHHHHhcCCEEEecCCCCCCHHHHHHHhcCCEEEEECCCCCCCHHHHHhC-CccceEEEECCcccc
Confidence 3689999999999899998766666532 257789999999999999987778999999998 58 999999999999
Q ss_pred ccChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccc---cccceeccCCEEEEEecChhHH
Q 007512 134 NVDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRN---KYVGVSLVGKTLAVLGFGKVGS 210 (600)
Q Consensus 134 ~iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~---~~~g~~l~gktiGIIGlG~IG~ 210 (600)
|||+++|+++||.|+|+||+|+.+||||++++||+++|+++++++.+++|.|.+. .+.+.++.|+||||||+|.||+
T Consensus 80 ~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~ 159 (320)
T 1gdh_A 80 HIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQ 159 (320)
T ss_dssp TBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHH
T ss_pred cccHHHHHhCCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHH
Confidence 9999999999999999999999999999999999999999999999999999732 2467899999999999999999
Q ss_pred HHHHHhhcCCCEEEEECC-CCChhHHHHcCCccc-CHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccC
Q 007512 211 EVARRAKGLGMHVIAHDP-YAPADRARAIGVDLV-SFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 211 ~vA~~l~~~g~~V~~~d~-~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvar 288 (600)
++|+++++|||+|++||+ +.....+.+.|+... ++++++++||+|++|+|++++|+++++++.|+.||+|++|||++|
T Consensus 160 ~~A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~ar 239 (320)
T 1gdh_A 160 ALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTAR 239 (320)
T ss_dssp HHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred HHHHHHHHCCCEEEEECCCCcChhhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCC
Confidence 999999999999999999 876656667788777 899999999999999999999999999999999999999999999
Q ss_pred CccccHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCC
Q 007512 289 GGVIDEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGELAA 366 (600)
Q Consensus 289 g~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~~~~ 366 (600)
|+++|+++|.++|++|+|+||++|||+.|| +.++|||+++|+++|||++++|.|+++++...+ +|+.+|++|+++.
T Consensus 240 g~~vd~~aL~~aL~~g~i~gA~lDv~~~eP-~~~~~L~~~~nviltPH~~~~t~~~~~~~~~~~-~nl~~~~~g~~~~ 315 (320)
T 1gdh_A 240 GDLVDNELVVAALEAGRLAYAGFDVFAGEP-NINEGYYDLPNTFLFPHIGSAATQAREDMAHQA-NDLIDALFGGADM 315 (320)
T ss_dssp GGGBCHHHHHHHHHHTSEEEEEESCCTTTT-SCCTTGGGCTTEEECSSCTTCBHHHHHHHHHHH-HHHHHHHHTTSCC
T ss_pred CcccCHHHHHHHHHhCCCcEEEEeCCCCCC-CCCChhhhCCCEEECCcCCcCcHHHHHHHHHHH-HHHHHHHcCCCCc
Confidence 999999999999999999999999999999 788999999999999999999999999999999 9999999997654
No 20
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=8.6e-61 Score=504.34 Aligned_cols=311 Identities=25% Similarity=0.388 Sum_probs=275.1
Q ss_pred CeEEEec--CCCHhHHHHhcc-cC-cEEEccCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCC--ceEEEEcCccc
Q 007512 59 PTVLIAE--KLGQAGLDLLNE-FA-NVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGR--LKVVGRAGVGI 132 (600)
Q Consensus 59 ~~ilv~~--~l~~~~~~~l~~-~~-~v~~~~~~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~--Lk~I~~~g~G~ 132 (600)
|||++++ ...++.++.|.+ .. ++.+......+++.+.++++|++++++.+++++++++++ |+ ||+|+++|+|+
T Consensus 1 Mkil~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~~~Lk~I~~~~~G~ 79 (333)
T 1dxy_A 1 MKIIAYGARVDEIQYFKQWAKDTGNTLEYHTEFLDENTVEWAKGFDGINSLQTTPYAAGVFEKM-HAYGIKFLTIRNVGT 79 (333)
T ss_dssp CEEEECSCCTTTHHHHHHHHHHHCCEEEECSSCCCTTGGGGGTTCSEEEECCSSCBCHHHHHHH-HHTTCCEEEESSSCC
T ss_pred CEEEEEeccccCHHHHHHHHHhCCeEEEEcCCCChHHHHHHhcCCeEEEEcCCCCCCHHHHHhC-cccCceEEEEcCccc
Confidence 4788754 445556666644 22 455444334457778899999999987788999999987 46 99999999999
Q ss_pred CccChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCcccc-ccccceeccCCEEEEEecChhHHH
Q 007512 133 DNVDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQR-NKYVGVSLVGKTLAVLGFGKVGSE 211 (600)
Q Consensus 133 d~iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~-~~~~g~~l~gktiGIIGlG~IG~~ 211 (600)
||||+++|+++||.|+|+||+++.+||||++++||+++|+++++++.+++|.|.+ ....+.++.|+||||||+|.||+.
T Consensus 80 d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~ 159 (333)
T 1dxy_A 80 DNIDMTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQV 159 (333)
T ss_dssp TTBCHHHHHHTTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHH
T ss_pred CccCHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999964 345688999999999999999999
Q ss_pred HHHHhhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCcc
Q 007512 212 VARRAKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGV 291 (600)
Q Consensus 212 vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~i 291 (600)
+|+++++|||+|++||++.... +. ..+.+.++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||++
T Consensus 160 ~A~~l~~~G~~V~~~d~~~~~~-~~-~~~~~~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~ 237 (333)
T 1dxy_A 160 AIKLFKGFGAKVIAYDPYPMKG-DH-PDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNL 237 (333)
T ss_dssp HHHHHHHTTCEEEEECSSCCSS-CC-TTCEECCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTS
T ss_pred HHHHHHHCCCEEEEECCCcchh-hH-hccccCCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcc
Confidence 9999999999999999987433 22 235566899999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHhHhcCCceEEEEeccCCCCC--C--------CC---CccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHH
Q 007512 292 IDEEALVRALDSGRVAQAALDVFTEEPP--P--------AD---SKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVG 358 (600)
Q Consensus 292 vde~aL~~aL~~g~i~ga~lDv~~~EP~--~--------~~---~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~ 358 (600)
+|+++|+++|++|+|+||+||||++||+ + .+ +|||++|||++|||+|++|.|+++++...+++|+.+
T Consensus 238 vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~pL~~~~nvi~TPHia~~t~e~~~~~~~~~~~nl~~ 317 (333)
T 1dxy_A 238 IDTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLSPHIAYYTETAVHNMVYFSLQHLVD 317 (333)
T ss_dssp BCHHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTTEEECSSCTTCSHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHhCCccEEEEecCCCCCCcccccccccccCccchhHHhcCCCEEECCccccChHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999983 1 12 589999999999999999999999999999999999
Q ss_pred HHcCCCCCccccCC
Q 007512 359 ALKGELAATAVNAP 372 (600)
Q Consensus 359 ~l~g~~~~~~vn~~ 372 (600)
|++|+.+.+.||.|
T Consensus 318 ~~~g~~~~~~v~~~ 331 (333)
T 1dxy_A 318 FLTKGETSTEVTGP 331 (333)
T ss_dssp HHHHSCCTTEECC-
T ss_pred HHcCCCCCceeCCC
Confidence 99999999999876
No 21
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=9.6e-60 Score=491.93 Aligned_cols=304 Identities=35% Similarity=0.521 Sum_probs=279.6
Q ss_pred CeEEEecCCCHhHHHHhccc-CcEEEcc--CCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcCcccCcc
Q 007512 59 PTVLIAEKLGQAGLDLLNEF-ANVDCAY--NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNV 135 (600)
Q Consensus 59 ~~ilv~~~l~~~~~~~l~~~-~~v~~~~--~~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~d~i 135 (600)
||||+++.+.++.++.|++. .++.+.. ..+.+++.+.++++|++++++.+++++++++++ |+||+|++.|+|+|||
T Consensus 1 ~~vl~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~i~~~~~G~d~i 79 (311)
T 2cuk_A 1 MRVLVTRTLPGKALDRLRERGLEVEVHRGLFLPKAELLKRVEGAVGLIPTVEDRIDAEVMDRA-KGLKVIACYSVGVDHV 79 (311)
T ss_dssp CEEEESSCCSSSTTHHHHHTTCEEEECCSSCCCHHHHHHHHTTCSEEECCTTSCBCHHHHHHS-TTCCEEECSSSCCTTB
T ss_pred CEEEEeCCCCHHHHHHHHhcCCeEEEecCCCCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCeEEEECCcCcccc
Confidence 68999998888888888876 5776532 346788999999999999887778999999997 6999999999999999
Q ss_pred ChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccc---cccceeccCCEEEEEecChhHHHH
Q 007512 136 DLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRN---KYVGVSLVGKTLAVLGFGKVGSEV 212 (600)
Q Consensus 136 D~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~---~~~g~~l~gktiGIIGlG~IG~~v 212 (600)
|+++|+++||.|+|+||+|+.+||||++++||+++|+++.+++.+++|.|.+. .+.+.++.|+||||||+|.||+++
T Consensus 80 d~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~ 159 (311)
T 2cuk_A 80 DLEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAV 159 (311)
T ss_dssp CHHHHHTTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHH
T ss_pred CHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHH
Confidence 99999999999999999999999999999999999999999999999999642 235789999999999999999999
Q ss_pred HHHhhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCccc
Q 007512 213 ARRAKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVI 292 (600)
Q Consensus 213 A~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~iv 292 (600)
|+++++|||+|++||++..... +...++++++++||+|++|+|++++|+++++++.++.||+|+++||++||+++
T Consensus 160 A~~l~~~G~~V~~~d~~~~~~~-----~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~v 234 (311)
T 2cuk_A 160 AKRALAFGMRVVYHARTPKPLP-----YPFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALV 234 (311)
T ss_dssp HHHHHHTTCEEEEECSSCCSSS-----SCBCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGB
T ss_pred HHHHHHCCCEEEEECCCCcccc-----cccCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCcc
Confidence 9999999999999999874322 34568999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCccc
Q 007512 293 DEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGELAATAV 369 (600)
Q Consensus 293 de~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~~v 369 (600)
|+++|.++|+ |+|+||++|||+.||++.++|||+++|+++|||++++|.|+++++...+++|+.+|++|+.+.+.|
T Consensus 235 d~~aL~~aL~-g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v 310 (311)
T 2cuk_A 235 DTEALVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAVITPHIGSAGRTTRERMAEVAVENLLAVLEGREPPNPV 310 (311)
T ss_dssp CHHHHHHHHT-TTSSEEEESSCSSSSCCTTSGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCCSSBC
T ss_pred CHHHHHHHHh-CcCCEEEEeeCCCCCCCCCChhhhCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCCcc
Confidence 9999999999 999999999999999888999999999999999999999999999999999999999998776654
No 22
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=100.00 E-value=4.7e-60 Score=498.42 Aligned_cols=309 Identities=24% Similarity=0.347 Sum_probs=275.1
Q ss_pred CeEEEec--CCCHhHHHHhcccC--cEEEcc-CCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCC--ceEEEEcCcc
Q 007512 59 PTVLIAE--KLGQAGLDLLNEFA--NVDCAY-NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGR--LKVVGRAGVG 131 (600)
Q Consensus 59 ~~ilv~~--~l~~~~~~~l~~~~--~v~~~~-~~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~--Lk~I~~~g~G 131 (600)
|||++++ ++.++.++.|.+.. ++.+.. ..+++++.+.++++|++++++.+++++++++++ |+ ||+|++.|+|
T Consensus 1 mki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~~~Lk~I~~~~~G 79 (331)
T 1xdw_A 1 MKVLCYGVRDVELPIFEACNKEFGYDIKCVPDYLNTKETAEMAAGFDAVILRGNCFANKQNLDIY-KKLGVKYILTRTAG 79 (331)
T ss_dssp CEEEECSCCTTTHHHHHHHGGGTCCEEEECSCCSCSHHHHHTTTTCSEEEECTTCCBCHHHHHHH-HHHTCCEEEESSSC
T ss_pred CEEEEEecCccCHHHHHHHHHhcCeEEEECCCCCCHHHHHHHhcCCeEEEEeCCCCCCHHHHhhC-cccCceEEEEcccc
Confidence 4788854 55666777775533 454433 235578888999999999987788999999987 57 9999999999
Q ss_pred cCccChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCcccc-ccccceeccCCEEEEEecChhHH
Q 007512 132 IDNVDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQR-NKYVGVSLVGKTLAVLGFGKVGS 210 (600)
Q Consensus 132 ~d~iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~-~~~~g~~l~gktiGIIGlG~IG~ 210 (600)
+||||+++|+++||.|+|+||+++.+||||++++||+++|+++++++.+++|.|.+ ....+.++.|+||||||+|.||+
T Consensus 80 ~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~ 159 (331)
T 1xdw_A 80 TDHIDKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGVVGLGRIGR 159 (331)
T ss_dssp CTTBCHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEEECCSHHHH
T ss_pred ccccCHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEEECcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999964 34568899999999999999999
Q ss_pred HHHHHhhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCc
Q 007512 211 EVARRAKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGG 290 (600)
Q Consensus 211 ~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ 290 (600)
.+|+++++|||+|++||++.... +. .++...++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+
T Consensus 160 ~~A~~l~~~G~~V~~~d~~~~~~-~~-~~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~ 237 (331)
T 1xdw_A 160 VAAQIFHGMGATVIGEDVFEIKG-IE-DYCTQVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQ 237 (331)
T ss_dssp HHHHHHHHTTCEEEEECSSCCCS-CT-TTCEECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGG
T ss_pred HHHHHHHHCCCEEEEECCCccHH-HH-hccccCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcc
Confidence 99999999999999999987433 22 23556689999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHhHhcCCceEEEEeccCCCCC--CCC-------C----ccccC-CcEEEcCCCCCCcHHHHHHHHHHHHHHH
Q 007512 291 VIDEEALVRALDSGRVAQAALDVFTEEPP--PAD-------S----KLVQH-ERVTVTPHLGASTMEAQEGVAIEIAEAV 356 (600)
Q Consensus 291 ivde~aL~~aL~~g~i~ga~lDv~~~EP~--~~~-------~----~L~~~-~nvilTPH~~~~t~ea~~~~~~~~~~~l 356 (600)
++|+++|+++|++|+|+||+||||+.||+ +.+ + |||++ ||+++|||+|++|.|+++++...+++|+
T Consensus 238 ~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~~L~~~~~nvilTPHia~~t~~~~~~~~~~~~~nl 317 (331)
T 1xdw_A 238 LVDTEAVIEAVESGKLGGYGCDVLDGEASVFGKDLEGQKLENPLFEKLVDLYPRVLITPHLGSYTDEAVKNMVEVSYQNL 317 (331)
T ss_dssp GBCHHHHHHHHHHTSEEEEEESCCTTGGGTTTCCCTTSCCSSHHHHHHHHTTTTEEECCSCTTCSHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHhCCceEEEEecCCCCCCcccccccccccCccchHHHHhCCCCEEEcCccccChHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999994 222 3 79999 9999999999999999999999999999
Q ss_pred HHHHcCCCCCcccc
Q 007512 357 VGALKGELAATAVN 370 (600)
Q Consensus 357 ~~~l~g~~~~~~vn 370 (600)
.+|++|+.+.+.||
T Consensus 318 ~~~~~g~~~~~~v~ 331 (331)
T 1xdw_A 318 KDLAETGDCPNKIK 331 (331)
T ss_dssp HHHHHHSCCTTBCC
T ss_pred HHHHcCCCCCCCCC
Confidence 99999998888775
No 23
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=100.00 E-value=1.7e-60 Score=507.46 Aligned_cols=310 Identities=24% Similarity=0.367 Sum_probs=282.0
Q ss_pred CCCCCeEEEecCCCHhHHHHhcccC-cEEEccC--CCHhHHhhhcCCceEEEEcCC--CCCCHHHHhccCCCceEEEEcC
Q 007512 55 ISSKPTVLIAEKLGQAGLDLLNEFA-NVDCAYN--LSPEELCTKISLCDALIVRSG--TKVNRDVFESSAGRLKVVGRAG 129 (600)
Q Consensus 55 ~~~~~~ilv~~~l~~~~~~~l~~~~-~v~~~~~--~~~~el~~~i~~~d~li~~~~--~~~~~~~l~~~~~~Lk~I~~~g 129 (600)
...+|+||+.|...+...++|++.+ ++.+... .+.+++.+.+.++|+++++.. +++++++++++ |+||+|++.|
T Consensus 14 ~~~~~~vl~~d~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~l~~~-~~Lk~I~~~~ 92 (364)
T 2j6i_A 14 AADEEKLYGCTENKLGIANWLKDQGHELITTSDKEGGNSVLDQHIPDADIIITTPFHPAYITKERIDKA-KKLKLVVVAG 92 (364)
T ss_dssp HHHCTTCTTBTTTGGGCHHHHHHTTCEEEEESCCSSTTSHHHHHGGGCSEEEECTTSCCCBCHHHHHHC-TTCCEEEESS
T ss_pred cccCceEEEecCccHHHHHHHHhCCCEEEEcCCCCCCHHHHHHHhhCCeEEEecCcCCCCCCHHHHhhC-CCCeEEEECC
Confidence 4568999999998888888887754 6655332 245788899999999998642 46899999997 6999999999
Q ss_pred cccCccChhHHHhC--CceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCcccccc--ccceeccCCEEEEEec
Q 007512 130 VGIDNVDLAAATEF--GCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNK--YVGVSLVGKTLAVLGF 205 (600)
Q Consensus 130 ~G~d~iD~~aa~~~--GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~--~~g~~l~gktiGIIGl 205 (600)
+|+||||+++|+++ ||.|+|+||+|+.+||||++++||+++|+++.+++.+++|.|.+.. ..+.+|+|+||||||+
T Consensus 93 ~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tvgIIG~ 172 (364)
T 2j6i_A 93 VGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTIATIGA 172 (364)
T ss_dssp SCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECC
T ss_pred cccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEEEEECc
Confidence 99999999999999 9999999999999999999999999999999999999999997532 2578999999999999
Q ss_pred ChhHHHHHHHhhcCCCE-EEEECCCC-ChhHHHHcCCccc-CHHHHhccCCEEEEecCCCccccccccHhHhccCCCceE
Q 007512 206 GKVGSEVARRAKGLGMH-VIAHDPYA-PADRARAIGVDLV-SFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVR 282 (600)
Q Consensus 206 G~IG~~vA~~l~~~g~~-V~~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gai 282 (600)
|+||+.+|+++++|||+ |++||++. +.+.+.+.|+..+ ++++++++||+|++|+|++++|+++++++.|+.||+|++
T Consensus 173 G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~ 252 (364)
T 2j6i_A 173 GRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAW 252 (364)
T ss_dssp SHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEE
T ss_pred CHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCE
Confidence 99999999999999997 99999877 5556667787665 899999999999999999999999999999999999999
Q ss_pred EEEccCCccccHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccC--C---cEEEcCCCCCCcHHHHHHHHHHHHHHHH
Q 007512 283 IINVARGGVIDEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQH--E---RVTVTPHLGASTMEAQEGVAIEIAEAVV 357 (600)
Q Consensus 283 lvNvarg~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~--~---nvilTPH~~~~t~ea~~~~~~~~~~~l~ 357 (600)
|||+|||+++|+++|+++|++|+|+||+||||++||++.++|||.+ | |+++|||+|++|.|++.+++..+++|+.
T Consensus 253 lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf~~EP~~~~~pL~~~~~~~~~nvilTPHia~~t~e~~~~~~~~~~~nl~ 332 (364)
T 2j6i_A 253 LVNTARGAICVAEDVAAALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAMTPHYSGTTLDAQTRYAQGTVNILE 332 (364)
T ss_dssp EEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCHHHHCCCTTSCCEEECCSCGGGSHHHHHHHHHHHHHHHH
T ss_pred EEECCCCchhCHHHHHHHHHcCCCcEEEEecCCCCCCCCCChHHhccCCccCcEEECCccCcCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 9 9999999999999999999999999999
Q ss_pred HHHcCCCC
Q 007512 358 GALKGELA 365 (600)
Q Consensus 358 ~~l~g~~~ 365 (600)
+|++|+.+
T Consensus 333 ~~~~g~~~ 340 (364)
T 2j6i_A 333 SFFTGKFD 340 (364)
T ss_dssp HHHTTCCC
T ss_pred HHHcCCCC
Confidence 99999843
No 24
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=100.00 E-value=8e-60 Score=505.07 Aligned_cols=297 Identities=24% Similarity=0.376 Sum_probs=270.8
Q ss_pred HHhcccC-cEEEccC--CCHhHHhhhcCCceEEEEcC--CCCCCHHHHhccCCCceEEEEcCcccCccChhHHHhCCcee
Q 007512 73 DLLNEFA-NVDCAYN--LSPEELCTKISLCDALIVRS--GTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLV 147 (600)
Q Consensus 73 ~~l~~~~-~v~~~~~--~~~~el~~~i~~~d~li~~~--~~~~~~~~l~~~~~~Lk~I~~~g~G~d~iD~~aa~~~GI~V 147 (600)
+.|++.+ ++.+.+. .+.+++.+.+.++|+++++. .+++++++|+++ |+||+|+++|+|+||||+++|+++||.|
T Consensus 61 ~~l~~~g~~v~~~~~~~~~~~~l~~~l~~ad~li~~~~~~~~i~~~~l~~~-p~Lk~I~~~g~G~d~iD~~aa~~~gI~V 139 (393)
T 2nac_A 61 KYLESNGHTLVVTSDKDGPDSVFERELVDADVVISQPFWPAYLTPERIAKA-KNLKLALTAGIGSDHVDLQSAIDRNVTV 139 (393)
T ss_dssp HHHHHTTCEEEEESCCSSTTSHHHHHHTTCSEEEEBTTBCCCBCHHHHHHC-TTCCEEEESSSCCTTBCHHHHHHTTCEE
T ss_pred HHHHhCCCEEEEecCCCCCHHHHHHhccCCCEEEEcCccCCCCCHHHHhhC-CCCcEEEEcCccccccCHHHHhcCCEEE
Confidence 4666654 5654332 24557888999999999864 457999999997 6999999999999999999999999999
Q ss_pred ecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCcccccc--ccceeccCCEEEEEecChhHHHHHHHhhcCCCEEEE
Q 007512 148 VNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNK--YVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIA 225 (600)
Q Consensus 148 ~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~--~~g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~ 225 (600)
+|+|++|+.+||||++++||+++|+++++++.+++|.|+... ..+.+|+|+||||||+|+||+++|+++++|||+|++
T Consensus 140 ~n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~ 219 (393)
T 2nac_A 140 AEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHY 219 (393)
T ss_dssp EECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEE
T ss_pred EeCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCccccccCCccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEE
Confidence 999999999999999999999999999999999999997532 246899999999999999999999999999999999
Q ss_pred ECCCC-ChhHHHHcCCcc-cCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhc
Q 007512 226 HDPYA-PADRARAIGVDL-VSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDS 303 (600)
Q Consensus 226 ~d~~~-~~~~a~~~g~~~-~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~ 303 (600)
||++. ..+.+.+.|+.. .++++++++||+|++|+|++++|+++++++.|+.||+|++|||++||+++|+++|+++|++
T Consensus 220 ~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~ 299 (393)
T 2nac_A 220 TDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALES 299 (393)
T ss_dssp ECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred EcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHc
Confidence 99986 455666778875 4899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCcccc
Q 007512 304 GRVAQAALDVFTEEPPPADSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGELAATAVN 370 (600)
Q Consensus 304 g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~~vn 370 (600)
|+|+||++|||+.||++.++|||++||+++|||+|+.|.|+++++...+++|+.+|++|++..+.++
T Consensus 300 g~i~gA~lDV~~~EP~~~~~pL~~~~nvilTPHia~~T~e~~~~~~~~~~~nl~~~~~G~~~~~~~~ 366 (393)
T 2nac_A 300 GRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISGTTLTAQARYAAGTREILECFFEGRPIRDEYL 366 (393)
T ss_dssp TSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCTTCSHHHHHHHHHHHHHHHHHHHHTCCCCGGGE
T ss_pred CCeeEEEEEecCCCCCCCCChhHcCCCEEECCCCCcCcHHHHHHHHHHHHHHHHHHHcCCCCcceeE
Confidence 9999999999999999899999999999999999999999999999999999999999998887665
No 25
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=100.00 E-value=3e-59 Score=495.51 Aligned_cols=320 Identities=26% Similarity=0.374 Sum_probs=289.2
Q ss_pred CCCeEEEecC-C--CHhHHHHhcccCcEEEccCCCHhHHhhhcC-----CceEEEEcC------CCCCCHHHHhccCCCc
Q 007512 57 SKPTVLIAEK-L--GQAGLDLLNEFANVDCAYNLSPEELCTKIS-----LCDALIVRS------GTKVNRDVFESSAGRL 122 (600)
Q Consensus 57 ~~~~ilv~~~-l--~~~~~~~l~~~~~v~~~~~~~~~el~~~i~-----~~d~li~~~------~~~~~~~~l~~~~~~L 122 (600)
.|||||++++ + .+..++.|++.+++.+....+++++.+.+. ++|++++++ .+++++++|++++++|
T Consensus 2 ~~~~vl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~L 81 (348)
T 2w2k_A 2 PRPRVLLLGDPARHLDDLWSDFQQKFEVIPANLTTHDGFKQALREKRYGDFEAIIKLAVENGTESYPWNADLISHLPSSL 81 (348)
T ss_dssp CCCEEEECSSCCSSCHHHHHHHHHHSEEEECCCCCHHHHHHHHHTTTTCCCSEEEECSTTTTGGGCCBCHHHHTTSCTTC
T ss_pred CCcEEEEECCccccChHHHHHHHhcceEEecCCCCHHHHHHHhhhcccCCeEEEEEcccccccccCCCCHHHHHhcccCc
Confidence 4789999998 5 367788887767776655567889988887 899988752 3579999999884369
Q ss_pred eEEEEcCcccCccChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCc---ccccc----ccceec
Q 007512 123 KVVGRAGVGIDNVDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGK---WQRNK----YVGVSL 195 (600)
Q Consensus 123 k~I~~~g~G~d~iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~---W~~~~----~~g~~l 195 (600)
|+|+++|+|+||||+++|+++||.|+|+||+|+.+||||++++||+++|+++++++.+++|. |.+.. ..|.++
T Consensus 82 k~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAe~~~~l~L~~~R~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~l 161 (348)
T 2w2k_A 82 KVFAAAGAGFDWLDLDALNERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERAARTGDPETFNRVHLEIGKSAHNP 161 (348)
T ss_dssp CEEEESSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHHHHHHHHHHTTCCCS
T ss_pred eEEEECCccccccCHHHHHhCCcEEEECCCCCcHHHHHHHHHHHHHHHhChHHHHHHHHcCCCcccccccccccccCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999 95321 357899
Q ss_pred cCCEEEEEecChhHHHHHHHhh-cCCCEEEEECCCC-ChhHHHHcCCccc-CHHHHhccCCEEEEecCCCccccccccHh
Q 007512 196 VGKTLAVLGFGKVGSEVARRAK-GLGMHVIAHDPYA-PADRARAIGVDLV-SFDEAIATADFISLHMPLTPATSKVLNDE 272 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~-~~g~~V~~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~~~ 272 (600)
+|+||||||+|.||+.+|++++ +|||+|++||++. ..+.+.+.|+..+ ++++++++||+|++|+|++++|+++++++
T Consensus 162 ~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~ 241 (348)
T 2w2k_A 162 RGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLIDEA 241 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHH
T ss_pred CCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHH
Confidence 9999999999999999999999 9999999999987 4455566688776 89999999999999999999999999999
Q ss_pred HhccCCCceEEEEccCCccccHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHH
Q 007512 273 TFGKMKKGVRIINVARGGVIDEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTVTPHLGASTMEAQEGVAIEI 352 (600)
Q Consensus 273 ~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~ 352 (600)
.++.||+|++|||++||+++|+++|.++|++|+|+||++|||+.|| +.++|||+++||++|||+|+.|.|++.++...+
T Consensus 242 ~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP-~~~~~L~~~~nviltPH~~~~t~e~~~~~~~~~ 320 (348)
T 2w2k_A 242 FFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEP-QVSKELIEMKHVTLTTHIGGVAIETFHEFERLT 320 (348)
T ss_dssp HHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTT-SCCHHHHTSSSEEECCSCTTCSHHHHHHHHHHH
T ss_pred HHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCC-CCCchhhcCCCEEEcCcCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998 567899999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCccccCCCCChh
Q 007512 353 AEAVVGALKGELAATAVNAPMVPAE 377 (600)
Q Consensus 353 ~~~l~~~l~g~~~~~~vn~~~i~~~ 377 (600)
++|+.+|++|+.+.+.||.+.++++
T Consensus 321 ~~ni~~~~~g~~~~~~v~~~~~~~~ 345 (348)
T 2w2k_A 321 MTNIDRFLLQGKPLLTPAGKVFAPS 345 (348)
T ss_dssp HHHHHHHHHTCCCCSSBCSCCCCCC
T ss_pred HHHHHHHHcCCCCcceecccccCcc
Confidence 9999999999999999998876543
No 26
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=100.00 E-value=3.9e-59 Score=491.21 Aligned_cols=310 Identities=26% Similarity=0.386 Sum_probs=281.6
Q ss_pred CCCCCeEEEecCCCHhHHHHhcccCcEEEcc-CCCHhH-HhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcCccc
Q 007512 55 ISSKPTVLIAEKLGQAGLDLLNEFANVDCAY-NLSPEE-LCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGI 132 (600)
Q Consensus 55 ~~~~~~ilv~~~l~~~~~~~l~~~~~v~~~~-~~~~~e-l~~~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~ 132 (600)
.|+||+|++++++.+..++.|++..++.... ..+.++ +.+.++++|++++++.+++++++++++ |+||+|+++|+|+
T Consensus 20 ~m~~~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-p~Lk~I~~~~~G~ 98 (333)
T 3ba1_A 20 HMEAIGVLMMCPMSTYLEQELDKRFKLFRYWTQPAQRDFLALQAESIRAVVGNSNAGADAELIDAL-PKLEIVSSFSVGL 98 (333)
T ss_dssp --CCCEEEECSCCCHHHHHHHHHHSEEEEGGGCSSHHHHHHHHTTTEEEEEECSSSCBCHHHHHHC-TTCCEEEESSSCC
T ss_pred cCCCCEEEEeCCCCHHHHHHHHhcCCEEEecCCCChHHHHHHHhCCCEEEEEcCCCCCCHHHHhhC-CCCcEEEEcCccc
Confidence 4567999999999999999998766766533 234444 666789999999987788999999997 6999999999999
Q ss_pred CccChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCcccccc-ccceeccCCEEEEEecChhHHH
Q 007512 133 DNVDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNK-YVGVSLVGKTLAVLGFGKVGSE 211 (600)
Q Consensus 133 d~iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~-~~g~~l~gktiGIIGlG~IG~~ 211 (600)
||||+++|+++||.|+|+||+|+.+||||++++||+++|+++++++.+++|.|.+.. ..|.+++|++|||||+|.||+.
T Consensus 99 d~id~~~~~~~gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~ 178 (333)
T 3ba1_A 99 DKVDLIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLA 178 (333)
T ss_dssp TTBCHHHHHHHTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHH
T ss_pred cccCHHHHHhCCcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999997533 3578999999999999999999
Q ss_pred HHHHhhcCCCEEEEECCCCChhHHHHcCCc-ccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCc
Q 007512 212 VARRAKGLGMHVIAHDPYAPADRARAIGVD-LVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGG 290 (600)
Q Consensus 212 vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~-~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ 290 (600)
+|+++++|||+|++||++.... .|+. ..++++++++||+|++|+|++++|+++++++.++.||+|++|||++||.
T Consensus 179 vA~~l~~~G~~V~~~dr~~~~~----~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~ 254 (333)
T 3ba1_A 179 VAERAEAFDCPISYFSRSKKPN----TNYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGP 254 (333)
T ss_dssp HHHHHHTTTCCEEEECSSCCTT----CCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGG
T ss_pred HHHHHHHCCCEEEEECCCchhc----cCceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCc
Confidence 9999999999999999986432 2554 4589999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCcccc
Q 007512 291 VIDEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGELAATAVN 370 (600)
Q Consensus 291 ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~~vn 370 (600)
++|+++|.++|++|+++||++|||+.||++. +|||+++|+++|||+|+.|.|+++++...+++|+.+|++|+++.+.||
T Consensus 255 ~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~-~~L~~~~nviltPH~~~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~Vn 333 (333)
T 3ba1_A 255 HVDEPELVSALVEGRLGGAGLDVFEREPEVP-EKLFGLENVVLLPHVGSGTVETRKVMADLVVGNLEAHFSGKPLLTPVV 333 (333)
T ss_dssp GBCHHHHHHHHHHTSSCEEEESCCTTTTCCC-GGGGGCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHHTCCCSSBCC
T ss_pred hhCHHHHHHHHHcCCCeEEEEecCCCCCCCc-chhhcCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 9999999999999999999999999999865 999999999999999999999999999999999999999998888775
No 27
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.7e-59 Score=493.07 Aligned_cols=312 Identities=31% Similarity=0.523 Sum_probs=289.1
Q ss_pred CCeEEEecCCCHhHHHHhcccCcEEEccCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcCcccCccCh
Q 007512 58 KPTVLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDL 137 (600)
Q Consensus 58 ~~~ilv~~~l~~~~~~~l~~~~~v~~~~~~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~d~iD~ 137 (600)
||||++++.+.++.++.|++..++.+....+.+++.+.+.++|++++++.+++++++++++ |+||+|++.|+|+||||+
T Consensus 2 ~~~il~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~ 80 (333)
T 2d0i_A 2 RPKVGVLLKMKREALEELKKYADVEIILYPSGEELKGVIGRFDGIIVSPTTKITREVLENA-ERLKVISCHSAGYDNIDL 80 (333)
T ss_dssp CSEEEECSCCCHHHHHHHHTTSEEEECCSCCHHHHHHHGGGCSEEEECTTSCBCHHHHTTC-TTCCEEEESSSCCTTBCH
T ss_pred CcEEEEECCCCHHHHHHHHhcCCEEEeCCCCHHHHHHHhcCCEEEEECCCCCCCHHHHhhC-CCceEEEECCcccccccH
Confidence 6899999999999999998766766543357888999999999999888788999999987 699999999999999999
Q ss_pred hHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccc--cccc----eeccCCEEEEEecChhHHH
Q 007512 138 AAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRN--KYVG----VSLVGKTLAVLGFGKVGSE 211 (600)
Q Consensus 138 ~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~--~~~g----~~l~gktiGIIGlG~IG~~ 211 (600)
++|+++||.|+|+||+++.+||||++++||+++|+++++++.+++|.|.+. .+.| .+|.|++|||||+|.||+.
T Consensus 81 ~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~ 160 (333)
T 2d0i_A 81 EEATKRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESHAKIWTGFKRIESLYGKKVGILGMGAIGKA 160 (333)
T ss_dssp HHHHHTTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCHHHHHTTSCCCCCSTTCEEEEECCSHHHHH
T ss_pred HHHHhCCcEEEeCCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCcCcccccCCcccCCCCcCEEEEEccCHHHHH
Confidence 999999999999999999999999999999999999999999999999642 2346 7999999999999999999
Q ss_pred HHHHhhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCcc
Q 007512 212 VARRAKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGV 291 (600)
Q Consensus 212 vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~i 291 (600)
+|++++++||+|++||++...+.+.+.|+...++++++++||+|++|+|.+++|+++++++.++.||+| +|||++||.+
T Consensus 161 vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg~~ 239 (333)
T 2d0i_A 161 IARRLIPFGVKLYYWSRHRKVNVEKELKARYMDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRGAL 239 (333)
T ss_dssp HHHHHGGGTCEEEEECSSCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCGGG
T ss_pred HHHHHHHCCCEEEEECCCcchhhhhhcCceecCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCCcc
Confidence 999999999999999998866556667777779999999999999999999999999999889999999 9999999999
Q ss_pred ccHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccCC-cEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCcccc
Q 007512 292 IDEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQHE-RVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGELAATAVN 370 (600)
Q Consensus 292 vde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~-nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~~vn 370 (600)
+|+++|.++|++++++|||+|||+.||++ ++|||+++ ||++|||+++.|.|+++++...+++|+.+|++|+.+.+.||
T Consensus 240 vd~~aL~~aL~~~~i~gaglDv~~~EP~~-~~~L~~~~~nviltPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~~~~v~ 318 (333)
T 2d0i_A 240 VDEKAVTEAIKQGKLKGYATDVFEKEPVR-EHELFKYEWETVLTPHYAGLALEAQEDVGFRAVENLLKVLRGEVPEDLVN 318 (333)
T ss_dssp BCHHHHHHHHHTTCBCEEEESCCSSSSCS-CCGGGGCTTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHHTTCCCTTBSC
T ss_pred cCHHHHHHHHHcCCceEEEecCCCCCCCC-CchHHcCCCCEEEcCccCCCcHHHHHHHHHHHHHHHHHHHcCCCCcCccC
Confidence 99999999999999999999999999987 89999999 99999999999999999999999999999999999999888
Q ss_pred CC
Q 007512 371 AP 372 (600)
Q Consensus 371 ~~ 372 (600)
+.
T Consensus 319 ~~ 320 (333)
T 2d0i_A 319 KE 320 (333)
T ss_dssp TT
T ss_pred HH
Confidence 54
No 28
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=100.00 E-value=1.4e-58 Score=489.44 Aligned_cols=311 Identities=28% Similarity=0.464 Sum_probs=277.2
Q ss_pred CCCCCeEEEecCCC-HhHHHHhcccCcEEEccCCCHhHHhhhc-CCceEEEEcCCCCCCHHHHhccCCCceEEEEcCccc
Q 007512 55 ISSKPTVLIAEKLG-QAGLDLLNEFANVDCAYNLSPEELCTKI-SLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGI 132 (600)
Q Consensus 55 ~~~~~~ilv~~~l~-~~~~~~l~~~~~v~~~~~~~~~el~~~i-~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~ 132 (600)
.+.||+|++.+... +..++.++...++......+.+|+.+.+ .++|+++++..+++++++++++ |+||+|+++|+|+
T Consensus 18 ~~~kp~i~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~ 96 (347)
T 1mx3_A 18 GSHMPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAVGALMYHTITLTREDLEKF-KALRIIVRIGSGF 96 (347)
T ss_dssp ---CCEEEESSCSCCTTTHHHHTTTCEEEECCCSSGGGSCHHHHHHEEEEEECSSSCBCHHHHTTC-SSCCEEEESSSCC
T ss_pred CCCCCEEEEEcCCcchhhHHHhhccceEEecCCCCHHHHHHHhhcCCeEEEEeCCCCCCHHHHhhC-CCCCEEEEccccc
Confidence 45699999987532 2236677776677766556677777764 7899988887778999999997 6999999999999
Q ss_pred CccChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCcccccc------ccc-eeccCCEEEEEec
Q 007512 133 DNVDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNK------YVG-VSLVGKTLAVLGF 205 (600)
Q Consensus 133 d~iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~------~~g-~~l~gktiGIIGl 205 (600)
||||+++|+++||.|+|+||+++.+||||++++||+++|+++.+++.+++|.|.... ..| .+++|+||||||+
T Consensus 97 d~id~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~g~tvGIIG~ 176 (347)
T 1mx3_A 97 DNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGL 176 (347)
T ss_dssp TTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTTCEEEEECC
T ss_pred CcccHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCCCCEEEEEeE
Confidence 999999999999999999999999999999999999999999999999999996421 113 6999999999999
Q ss_pred ChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEE
Q 007512 206 GKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLV-SFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRII 284 (600)
Q Consensus 206 G~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailv 284 (600)
|.||+.+|+++++|||+|++||++.....+...|+..+ ++++++++||+|++|+|++++|+++++++.|+.||+|++||
T Consensus 177 G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailI 256 (347)
T 1mx3_A 177 GRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLV 256 (347)
T ss_dssp SHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCcchhhHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEE
Confidence 99999999999999999999999875555566787654 89999999999999999999999999999999999999999
Q ss_pred EccCCccccHHHHHHhHhcCCceEEEEeccCCCCCC-CCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCC
Q 007512 285 NVARGGVIDEEALVRALDSGRVAQAALDVFTEEPPP-ADSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGE 363 (600)
Q Consensus 285 Nvarg~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~-~~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~ 363 (600)
|++||+++|+++|+++|++|+|+||++|||+.||++ .++||+.++|+++|||+++.|.++++++...+++|+.+|++|+
T Consensus 257 N~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~L~~~~nvi~tPHia~~t~~~~~~~~~~~~~ni~~~~~g~ 336 (347)
T 1mx3_A 257 NTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMREEAAREIRRAITGR 336 (347)
T ss_dssp ECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTTCSSEEECSSCTTCCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred ECCCChHHhHHHHHHHHHhCCCcEEEEeecccCCCCCCCchHHhCCCEEEEchHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999986 4689999999999999999999999999999999999999998
Q ss_pred CCC
Q 007512 364 LAA 366 (600)
Q Consensus 364 ~~~ 366 (600)
.+.
T Consensus 337 ~~~ 339 (347)
T 1mx3_A 337 IPD 339 (347)
T ss_dssp TTT
T ss_pred CCc
Confidence 765
No 29
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=100.00 E-value=3.8e-58 Score=484.59 Aligned_cols=312 Identities=34% Similarity=0.611 Sum_probs=288.3
Q ss_pred CCeEEEecCCCHhHHHHhcccCcEEEccC---CCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcCcccCc
Q 007512 58 KPTVLIAEKLGQAGLDLLNEFANVDCAYN---LSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDN 134 (600)
Q Consensus 58 ~~~ilv~~~l~~~~~~~l~~~~~v~~~~~---~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~d~ 134 (600)
|+||++++.+.+...+.|++..++.+... .+.+++.+.+.++|++++++.+++++++++++ |+||||++.|+|+||
T Consensus 2 ~~~il~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~ 80 (334)
T 2dbq_A 2 KPKVFITREIPEVGIKMLEDEFEVEVWGDEKEIPREILLKKVKEVDALVTMLSERIDKEVFENA-PKLRIVANYAVGYDN 80 (334)
T ss_dssp CCEEEESSCCCHHHHHHHHTTSEEEECCCSSCCCHHHHHHHTTSCSEEEECTTSCBCHHHHHTC-TTCCEEEESSSCCTT
T ss_pred CcEEEEecCCCHHHHHHHHhcCCEEEecCCCCCCHHHHHHHhcCcEEEEEcCCCCCCHHHHhhC-CCceEEEECCccccc
Confidence 57899999999988898887667765432 46788999999999999987778999999987 699999999999999
Q ss_pred cChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccc----c---ccccceeccCCEEEEEecCh
Q 007512 135 VDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQ----R---NKYVGVSLVGKTLAVLGFGK 207 (600)
Q Consensus 135 iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~----~---~~~~g~~l~gktiGIIGlG~ 207 (600)
||+++|+++||.|+|+||+|+.+||||++++||+++|+++++++.+++|.|. + ..+.|.++.|++|||||+|.
T Consensus 81 id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~ 160 (334)
T 2dbq_A 81 IDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGR 160 (334)
T ss_dssp BCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSH
T ss_pred ccHHHHHhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccCH
Confidence 9999999999999999999999999999999999999999999999999996 2 12347899999999999999
Q ss_pred hHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEcc
Q 007512 208 VGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 208 IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNva 287 (600)
||+.+|++++++||+|++||++...+.+.+.|+...++++++++||+|++|+|.+++|+++++++.+..||+|++|||++
T Consensus 161 iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~s 240 (334)
T 2dbq_A 161 IGQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIA 240 (334)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCHHHHHHHCCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred HHHHHHHHHHhCCCEEEEECCCcchhhHhhcCcccCCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence 99999999999999999999988655555678777799999999999999999999999999999999999999999999
Q ss_pred CCccccHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCc
Q 007512 288 RGGVIDEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGELAAT 367 (600)
Q Consensus 288 rg~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~ 367 (600)
||.++++++|.++|++|+++||++|||++|| +.++|||.++|+++|||+|+.|.++++++...+++|+.+|++|+.+.+
T Consensus 241 rg~~v~~~aL~~aL~~~~i~ga~lDv~~~EP-~~~~~L~~~~~vi~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~~~ 319 (334)
T 2dbq_A 241 RGKVVDTNALVKALKEGWIAGAGLDVFEEEP-YYNEELFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRGEIPPT 319 (334)
T ss_dssp CGGGBCHHHHHHHHHHTSSSEEEESCCSSSS-CCCHHHHHCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHTTCCCTT
T ss_pred CCcccCHHHHHHHHHhCCeeEEEecCCCCCC-CCCchhhcCCCEEECCccCCCcHHHHHHHHHHHHHHHHHHHcCCCCcc
Confidence 9999999999999999999999999999999 678999999999999999999999999999999999999999999988
Q ss_pred cccC
Q 007512 368 AVNA 371 (600)
Q Consensus 368 ~vn~ 371 (600)
.||+
T Consensus 320 ~v~~ 323 (334)
T 2dbq_A 320 LVNR 323 (334)
T ss_dssp BSCT
T ss_pred ccCH
Confidence 8884
No 30
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=100.00 E-value=9.5e-58 Score=480.87 Aligned_cols=316 Identities=27% Similarity=0.444 Sum_probs=288.5
Q ss_pred CCCCCeEEEecCCCHhHHHHhccc--CcEEEcc---CCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcC
Q 007512 55 ISSKPTVLIAEKLGQAGLDLLNEF--ANVDCAY---NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAG 129 (600)
Q Consensus 55 ~~~~~~ilv~~~l~~~~~~~l~~~--~~v~~~~---~~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g 129 (600)
++.|+||++++.+.+...+.|++. .++.+.. ..+++++.+.++++|++++++.++++++++++++|+||||++.|
T Consensus 5 ~~~~~~il~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~Lk~I~~~~ 84 (330)
T 2gcg_A 5 PVRLMKVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMS 84 (330)
T ss_dssp --CCEEEEESSCCCHHHHHHHHHCTTEEEEECCSSSCCCHHHHHHHHTTCSEEEECTTSCBCHHHHHHHCTTCCEEEESS
T ss_pred CCCCCEEEEECCCCHHHHHHHHhcCCceEEEecCCCCCCHHHHHHHhcCCeEEEECCCCCCCHHHHHhcCCCceEEEECC
Confidence 345679999999998888988876 4555432 34678999999999999998777899999998745999999999
Q ss_pred cccCccChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccc---cccceeccCCEEEEEecC
Q 007512 130 VGIDNVDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRN---KYVGVSLVGKTLAVLGFG 206 (600)
Q Consensus 130 ~G~d~iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~---~~~g~~l~gktiGIIGlG 206 (600)
+|+||||+++|+++||.|+|+||+++.+||||++++||+++|+++++++.+++|.|.+. .+.|.++.|++|||||+|
T Consensus 85 ~G~d~id~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G 164 (330)
T 2gcg_A 85 VGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLG 164 (330)
T ss_dssp SCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECCS
T ss_pred cccccccHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECcC
Confidence 99999999999999999999999999999999999999999999999999999999742 235789999999999999
Q ss_pred hhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEE
Q 007512 207 KVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIIN 285 (600)
Q Consensus 207 ~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvN 285 (600)
.||+.+|++++++|++|++||++. ..+.+.+.|+...++++++++||+|++|+|.+++|+++++++.++.||+|++|||
T Consensus 165 ~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn 244 (330)
T 2gcg_A 165 RIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFIN 244 (330)
T ss_dssp HHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeCCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEE
Confidence 999999999999999999999876 4555556677766999999999999999999999999999999999999999999
Q ss_pred ccCCccccHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC
Q 007512 286 VARGGVIDEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGELA 365 (600)
Q Consensus 286 varg~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~~~ 365 (600)
++||+++|+++|.++|++|+++||++|||+.||++.++|||+++|+++|||+|+.|.|+++++...+++|+.++++|+++
T Consensus 245 ~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~epl~~~~~l~~~~nvi~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~ 324 (330)
T 2gcg_A 245 ISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGEPM 324 (330)
T ss_dssp CSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CCCCcccCHHHHHHHHHcCCccEEEeCCCCCCCCCCCChhhcCCCEEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999999998999999999999999999999999999999999999999999988
Q ss_pred Ccccc
Q 007512 366 ATAVN 370 (600)
Q Consensus 366 ~~~vn 370 (600)
.+.||
T Consensus 325 ~~~v~ 329 (330)
T 2gcg_A 325 PSELK 329 (330)
T ss_dssp TTEEC
T ss_pred CCCCC
Confidence 88876
No 31
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=1e-58 Score=484.32 Aligned_cols=297 Identities=22% Similarity=0.285 Sum_probs=260.3
Q ss_pred CCCeEEEecCCC--HhHHHHhccc-CcEEEccCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcCcccC
Q 007512 57 SKPTVLIAEKLG--QAGLDLLNEF-ANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGID 133 (600)
Q Consensus 57 ~~~~ilv~~~l~--~~~~~~l~~~-~~v~~~~~~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~d 133 (600)
+.|||++..+.. ++..+.|++. .++++....+ + ...++|+++++. .+++++++ |+||+|++.|+|+|
T Consensus 2 ~~mkil~~~~~~~~~~~~~~l~~~~p~~~~~~~~~-~----~~~~ad~~i~~~---~~~~~l~~--~~Lk~I~~~~aG~d 71 (315)
T 3pp8_A 2 NAMEIIFYHPTFNAAWWVNALEKALPHARVREWKV-G----DNNPADYALVWQ---PPVEMLAG--RRLKAVFVLGAGVD 71 (315)
T ss_dssp CCEEEEEECSSSCHHHHHHHHHHHSTTEEEEECCT-T----CCSCCSEEEESS---CCHHHHTT--CCCSEEEESSSCCH
T ss_pred CceEEEEEcCCCchHHHHHHHHHHCCCCEEEecCC-C----CccCcEEEEECC---CCHHHhCC--CCceEEEECCEecc
Confidence 458999987754 4456666653 4665533211 1 356999999874 47899987 59999999999999
Q ss_pred cc-C-hhH---HHhCCceeecCCCCC-hHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecCh
Q 007512 134 NV-D-LAA---ATEFGCLVVNAPTAN-TVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGK 207 (600)
Q Consensus 134 ~i-D-~~a---a~~~GI~V~n~p~~~-~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~ 207 (600)
|| | +++ +.++||.|+|+|+++ +.+||||+++++|+++|+++++++.+++|+|.+. .+.+++||||||||+|.
T Consensus 72 ~i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~--~~~~l~g~tvGIiG~G~ 149 (315)
T 3pp8_A 72 AILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPL--PEYTREEFSVGIMGAGV 149 (315)
T ss_dssp HHHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC--CCCCSTTCCEEEECCSH
T ss_pred cccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCC--CCCCcCCCEEEEEeeCH
Confidence 99 7 887 789999999999864 8999999999999999999999999999999864 57899999999999999
Q ss_pred hHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCc----ccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEE
Q 007512 208 VGSEVARRAKGLGMHVIAHDPYAPADRARAIGVD----LVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRI 283 (600)
Q Consensus 208 IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~----~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gail 283 (600)
||+++|+++++|||+|++||++.... .++. ..++++++++||+|++|+|++++|+++++++.|+.||+|++|
T Consensus 150 IG~~vA~~l~~~G~~V~~~dr~~~~~----~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gail 225 (315)
T 3pp8_A 150 LGAKVAESLQAWGFPLRCWSRSRKSW----PGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYV 225 (315)
T ss_dssp HHHHHHHHHHTTTCCEEEEESSCCCC----TTCEEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEE
T ss_pred HHHHHHHHHHHCCCEEEEEcCCchhh----hhhhhhcccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEE
Confidence 99999999999999999999876321 1222 247999999999999999999999999999999999999999
Q ss_pred EEccCCccccHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCC
Q 007512 284 INVARGGVIDEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGE 363 (600)
Q Consensus 284 vNvarg~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~ 363 (600)
||+|||+++|+++|+++|++|+|+||++|||+.||++.++|||++||+++|||+|++|.+ +++...+++|+.+|++|+
T Consensus 226 IN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~--~~~~~~~~~ni~~~~~G~ 303 (315)
T 3pp8_A 226 LNLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQESPLWRHPRVAMTPHIAAVTRP--AEAIDYISRTITQLEKGE 303 (315)
T ss_dssp EECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGGCTTEEECSSCSSCCCH--HHHHHHHHHHHHHHHHTC
T ss_pred EECCCChhhhHHHHHHHHHhCCccEEEcCCCCCCCCCCCChhhcCCCEEECCCCCcccHH--HHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999999999999999999999999999986 568899999999999999
Q ss_pred CCCccccC
Q 007512 364 LAATAVNA 371 (600)
Q Consensus 364 ~~~~~vn~ 371 (600)
++.+.||+
T Consensus 304 ~~~~~V~~ 311 (315)
T 3pp8_A 304 PVTGQVDR 311 (315)
T ss_dssp CCCCBCCC
T ss_pred CCCceECc
Confidence 99999885
No 32
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=3.8e-57 Score=470.55 Aligned_cols=295 Identities=19% Similarity=0.251 Sum_probs=265.9
Q ss_pred CeEEEecCCCHhHHHHhcccCcEEEccCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcCcccCccChh
Q 007512 59 PTVLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLA 138 (600)
Q Consensus 59 ~~ilv~~~l~~~~~~~l~~~~~v~~~~~~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~d~iD~~ 138 (600)
||||+++++.++..+.|++.. .++. .+.+.++|+++++. .+.++++++ |+||+|++.|+|+||||++
T Consensus 1 m~il~~~~~~~~~~~~l~~~~-~~v~--------~~~~~~~d~~i~~~---~~~~~l~~~-~~Lk~I~~~~~G~d~id~~ 67 (303)
T 1qp8_A 1 MELYVNFELPPEAEEELRKYF-KIVR--------GGDLGNVEAALVSR---ITAEELAKM-PRLKFIQVVTAGLDHLPWE 67 (303)
T ss_dssp CEEECCSCCCHHHHHHHHTTC-EEEC--------SSCCTTBCCCCBSC---CCHHHHHHC-TTCCCEEBSSSCCTTSCCT
T ss_pred CEEEEccCCCHHHHHHHHhcC-Cccc--------hhhhCCCEEEEECC---CCHHHHhhC-CCCcEEEECCcCcccccHH
Confidence 479999999999898887652 2221 14678999998764 456899987 6999999999999999999
Q ss_pred HHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecChhHHHHHHHhhc
Q 007512 139 AATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKG 218 (600)
Q Consensus 139 aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~IG~~vA~~l~~ 218 (600)
++ ++||.|+|+||+|+.+||||++++||+++|+++.+++.+++|.|.+. ..+.++.|+||||||+|.||+++|+++++
T Consensus 68 ~~-~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~-~~~~~l~g~~vgIIG~G~IG~~~A~~l~~ 145 (303)
T 1qp8_A 68 SI-PPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRD-VEIPLIQGEKVAVLGLGEIGTRVGKILAA 145 (303)
T ss_dssp TS-CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC-SCCCCCTTCEEEEESCSTHHHHHHHHHHH
T ss_pred HH-hcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCC-CCCCCCCCCEEEEEccCHHHHHHHHHHHH
Confidence 85 79999999999999999999999999999999999999999999753 23458999999999999999999999999
Q ss_pred CCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCccccHHHHH
Q 007512 219 LGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEEALV 298 (600)
Q Consensus 219 ~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~ 298 (600)
|||+|++||++.. +. ......++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|.
T Consensus 146 ~G~~V~~~dr~~~-~~---~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~ 221 (303)
T 1qp8_A 146 LGAQVRGFSRTPK-EG---PWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVL 221 (303)
T ss_dssp TTCEEEEECSSCC-CS---SSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHH
T ss_pred CCCEEEEECCCcc-cc---CcccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHH
Confidence 9999999999875 21 1223458999999999999999999999999999999999999999999999999999999
Q ss_pred HhHhcCCceEEEEecc-CCCCCCCCCccccCCcEEEcCCCCCC--cHHHHHHHHHHHHHHHHHHHcCCCCCccccCC
Q 007512 299 RALDSGRVAQAALDVF-TEEPPPADSKLVQHERVTVTPHLGAS--TMEAQEGVAIEIAEAVVGALKGELAATAVNAP 372 (600)
Q Consensus 299 ~aL~~g~i~ga~lDv~-~~EP~~~~~~L~~~~nvilTPH~~~~--t~ea~~~~~~~~~~~l~~~l~g~~~~~~vn~~ 372 (600)
++|++|+|+||++||| ++||+++++|||++||+++|||+++. |.|+++++...+++|+.+|++|+.+.+.||+.
T Consensus 222 ~aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~nviltPH~~~~~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~v~~~ 298 (303)
T 1qp8_A 222 RILKERPQFIFASDVWWGRNDFAKDAEFFSLPNVVATPWVAGGYGNERVWRQMVMEAVRNLITYATGGRPRNIAKRE 298 (303)
T ss_dssp HHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTTEEECCSCSSSSSCHHHHHHHHHHHHHHHHHHHTTSCCSCBCCGG
T ss_pred HHHHhCCceEEEeccCCCCCCCCCCChhhcCCCEEECCCcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceeCHH
Confidence 9999999999999999 88999889999999999999999998 99999999999999999999999988888853
No 33
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=100.00 E-value=1e-55 Score=470.06 Aligned_cols=279 Identities=29% Similarity=0.438 Sum_probs=249.9
Q ss_pred CCCeEEEecCCCHhHHHHhcccCcEEEccC--CCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcCcccCc
Q 007512 57 SKPTVLIAEKLGQAGLDLLNEFANVDCAYN--LSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDN 134 (600)
Q Consensus 57 ~~~~ilv~~~l~~~~~~~l~~~~~v~~~~~--~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~d~ 134 (600)
++|||++.+.++ ...+++++.+++.+... ++.+ .+.++|++++++.+++++++++. ++||||+++|+|+||
T Consensus 2 ~mmkIl~~~~~p-~~~~~~~~~~~v~~~~~~~~~~~----~l~~ad~li~~~~~~v~~~ll~~--~~Lk~I~~~~~G~D~ 74 (381)
T 3oet_A 2 NAMKILVDENMP-YARELFSRLGEVKAVPGRPIPVE----ELNHADALMVRSVTKVNESLLSG--TPINFVGTATAGTDH 74 (381)
T ss_dssp CCCEEEEETTST-THHHHHTTSSEEEEECC---CHH----HHTTCSEEEECTTSCBSHHHHTT--SCCCEEEESSSCCTT
T ss_pred CceEEEECCCCc-HHHHHHhhCCcEEEeCCCCCCHH----HHCCCEEEEECCCCCCCHHHHcC--CCCEEEEEccccccc
Confidence 468999998874 46788888888776432 2333 47899999999888999999994 469999999999999
Q ss_pred cChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecChhHHHHHH
Q 007512 135 VDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVAR 214 (600)
Q Consensus 135 iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~IG~~vA~ 214 (600)
||+++|+++||.|+|+||+|+.+||||+++++|+++|+. |.+++||||||||+|+||+++|+
T Consensus 75 iD~~~~~~~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~------------------g~~l~gktvGIIGlG~IG~~vA~ 136 (381)
T 3oet_A 75 VDEAWLKQAGIGFSAAPGCNAIAVVEYVFSALLMLAERD------------------GFSLRDRTIGIVGVGNVGSRLQT 136 (381)
T ss_dssp BCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHHT------------------TCCGGGCEEEEECCSHHHHHHHH
T ss_pred cCHHHHHhCCEEEEECCCcCcchhHHHHHHHHHHHHHhc------------------CCccCCCEEEEEeECHHHHHHHH
Confidence 999999999999999999999999999999999999852 56899999999999999999999
Q ss_pred HhhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCcc----ccccccHhHhccCCCceEEEEccCCc
Q 007512 215 RAKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPA----TSKVLNDETFGKMKKGVRIINVARGG 290 (600)
Q Consensus 215 ~l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~----t~~li~~~~l~~mk~gailvNvarg~ 290 (600)
++++|||+|++|||+.. ....+....++++++++||+|++|+|++++ |+++++++.|+.||+|++|||+|||+
T Consensus 137 ~l~a~G~~V~~~d~~~~---~~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~ 213 (381)
T 3oet_A 137 RLEALGIRTLLCDPPRA---ARGDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGP 213 (381)
T ss_dssp HHHHTTCEEEEECHHHH---HTTCCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGG
T ss_pred HHHHCCCEEEEECCChH---HhccCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCc
Confidence 99999999999998531 112455677999999999999999999999 99999999999999999999999999
Q ss_pred cccHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC
Q 007512 291 VIDEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGELA 365 (600)
Q Consensus 291 ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~~~ 365 (600)
++|+++|+++|++|+++||++|||+.||++ +++||.++ +++|||+||+|.|++.++..++++++.+|+.+..-
T Consensus 214 vvde~aL~~aL~~g~i~gA~LDV~e~EP~~-~~~L~~~~-~i~TPHiag~t~e~~~~~~~~~~~~l~~~l~~~~~ 286 (381)
T 3oet_A 214 VVDNAALLARLNAGQPLSVVLDVWEGEPDL-NVALLEAV-DIGTSHIAGYTLEGKARGTTQVFEAYSAFIGREQR 286 (381)
T ss_dssp GBCHHHHHHHHHTTCCEEEEESCCTTTTSC-CHHHHHHS-SEECSSCTTCCHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred ccCHHHHHHHHHhCCCeEEEeeccccCCCC-cchhhhCC-EEECCccCcCcHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 999999999999999999999999999986 56798765 78999999999999999999999999999987543
No 34
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=100.00 E-value=6e-55 Score=450.55 Aligned_cols=277 Identities=25% Similarity=0.356 Sum_probs=240.9
Q ss_pred eEEEecCCC----HhHHHHhcccCcEEEccCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcCcccCcc
Q 007512 60 TVLIAEKLG----QAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNV 135 (600)
Q Consensus 60 ~ilv~~~l~----~~~~~~l~~~~~v~~~~~~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~d~i 135 (600)
+|++..++. +.+.+.|+.+. +.+ .+.+.++|++++ +.+++ ++ |+||||++.|+|+|||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~-~~~---------~~~~~~ad~li~-~~~~~------~~-~~Lk~I~~~~~G~d~i 63 (290)
T 3gvx_A 2 DVYVNFPADGHVREIAKTVLDGFD-LHW---------YPDYYDAEAQVI-KDRYV------LG-KRTKMIQAISAGVDHI 63 (290)
T ss_dssp CEEECSCCCHHHHHHHHHHTTTSC-EEE---------TTSCCCCSEEEE-SSCCC------CC-SSCCEEEECSSCCTTS
T ss_pred ceEEecCCcchHHHHHHHHhcccc-ccc---------Ccchhhhhhhhh-hhhhh------hh-hhhHHHHHHhcCCcee
Confidence 466666654 44555565542 222 157899999998 34443 44 6999999999999999
Q ss_pred ChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecChhHHHHHHH
Q 007512 136 DLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARR 215 (600)
Q Consensus 136 D~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~IG~~vA~~ 215 (600)
|+++|+++||.+.| ++.|+.+||||++++||+++|+++.+++.+++|+|.+.. ..+++|+||||||+|.||+++|++
T Consensus 64 d~~~~~~~~~~~~~-~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~--~~~l~g~tvGIIGlG~IG~~vA~~ 140 (290)
T 3gvx_A 64 DVNGIPENVVLCSN-AGAYSISVAEHAFALLLAHAKNILENNELMKAGIFRQSP--TTLLYGKALGILGYGGIGRRVAHL 140 (290)
T ss_dssp CGGGSCTTSEEECC-HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCC--CCCCTTCEEEEECCSHHHHHHHHH
T ss_pred ecCCCccceEEeec-CCcceeeHHHHHHHHHHHHHHhhhhhhhHhhhcccccCC--ceeeecchheeeccCchhHHHHHH
Confidence 99999987765555 589999999999999999999999999999999998753 378999999999999999999999
Q ss_pred hhcCCCEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCccccH
Q 007512 216 AKGLGMHVIAHDPYAPADRARAIGVDLV-SFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDE 294 (600)
Q Consensus 216 l~~~g~~V~~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde 294 (600)
+++|||+|++||++..... .+... ++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+
T Consensus 141 l~~~G~~V~~~dr~~~~~~----~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~ 216 (290)
T 3gvx_A 141 AKAFGMRVIAYTRSSVDQN----VDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSK 216 (290)
T ss_dssp HHHHTCEEEEECSSCCCTT----CSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCH
T ss_pred HHhhCcEEEEEeccccccc----cccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCC
Confidence 9999999999999863221 13444 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEEcCCCC-CCcHHHHHHHHHHHHHHHHHHHcCCC
Q 007512 295 EALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTVTPHLG-ASTMEAQEGVAIEIAEAVVGALKGEL 364 (600)
Q Consensus 295 ~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH~~-~~t~ea~~~~~~~~~~~l~~~l~g~~ 364 (600)
++|+++|++|++.||++|||+.||+ +|||++||+++|||+| ++|.|+++++...+++|+.+|++|++
T Consensus 217 ~aL~~aL~~g~i~ga~lDV~~~EP~---~pL~~~~nvilTPHiag~~t~e~~~~~~~~~~~ni~~~~~~~~ 284 (290)
T 3gvx_A 217 PDMIGFLKERSDVWYLSDVWWNEPE---ITETNLRNAILSPHVAGGMSGEIMDIAIQLAFENVRNFFEGEG 284 (290)
T ss_dssp HHHHHHHHHCTTCEEEESCCTTTTS---CCSCCCSSEEECCSCSSCBTTBCCHHHHHHHHHHHHHHTC---
T ss_pred cchhhhhhhccceEEeeccccCCcc---cchhhhhhhhcCccccCCccchHHHHHHHHHHHHHHhhhcCCC
Confidence 9999999999999999999999986 8999999999999999 99999999999999999999999876
No 35
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=100.00 E-value=6.9e-53 Score=449.25 Aligned_cols=280 Identities=28% Similarity=0.414 Sum_probs=248.0
Q ss_pred CeEEEecCCCHhHHHHhcccCcEEEccCCCHhHHhhhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcCcccCccChh
Q 007512 59 PTVLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLA 138 (600)
Q Consensus 59 ~~ilv~~~l~~~~~~~l~~~~~v~~~~~~~~~el~~~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~d~iD~~ 138 (600)
|||++.+.+.. ..+.+++.+++.+... .+...+.+.++|++++++.+++++++++ + |+||+|+++|+|+||||++
T Consensus 1 mkil~~~~~~~-~~~~~~~~~~v~~~~~--~~~~~~~l~~ad~li~~~~~~~~~~~l~-~-~~Lk~I~~~~~G~D~iD~~ 75 (380)
T 2o4c_A 1 MRILADENIPV-VDAFFADQGSIRRLPG--RAIDRAALAEVDVLLVRSVTEVSRAALA-G-SPVRFVGTCTIGTDHLDLD 75 (380)
T ss_dssp CEEEEETTCTT-HHHHHGGGSEEEEECG--GGCSTTTTTTCSEEEECTTSCBCHHHHT-T-SCCCEEEECSSCSTTBCHH
T ss_pred CEEEEecCchH-HHHHHHhCCcEEEecC--CcCChHHHCCcEEEEEcCCCCCCHHHhc-C-CCceEEEEcCcccchhhHH
Confidence 47888887654 4677777767665331 1112235689999999988899999999 6 6999999999999999999
Q ss_pred HHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecChhHHHHHHHhhc
Q 007512 139 AATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKG 218 (600)
Q Consensus 139 aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~IG~~vA~~l~~ 218 (600)
+|+++||.|+|+||+|+.+||||++++||+++|+ | |.++.|+||||||+|+||+++|+++++
T Consensus 76 ~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~------------~------~~~l~g~tvGIIGlG~IG~~vA~~l~~ 137 (380)
T 2o4c_A 76 YFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEV------------R------GADLAERTYGVVGAGQVGGRLVEVLRG 137 (380)
T ss_dssp HHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHH------------H------TCCGGGCEEEEECCSHHHHHHHHHHHH
T ss_pred HHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhh------------h------hcccCCCEEEEEeCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999996 2 468999999999999999999999999
Q ss_pred CCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCcc----ccccccHhHhccCCCceEEEEccCCccccH
Q 007512 219 LGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPA----TSKVLNDETFGKMKKGVRIINVARGGVIDE 294 (600)
Q Consensus 219 ~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~----t~~li~~~~l~~mk~gailvNvarg~ivde 294 (600)
|||+|++|||+... ...|....++++++++||+|++|+|++++ |+++++++.|+.||+|++|||+|||+++|+
T Consensus 138 ~G~~V~~~d~~~~~---~~~g~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~ 214 (380)
T 2o4c_A 138 LGWKVLVCDPPRQA---REPDGEFVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDN 214 (380)
T ss_dssp TTCEEEEECHHHHH---HSTTSCCCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCH
T ss_pred CCCEEEEEcCChhh---hccCcccCCHHHHHHhCCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCH
Confidence 99999999986421 13455667999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCC
Q 007512 295 EALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGELAA 366 (600)
Q Consensus 295 ~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~~~~ 366 (600)
++|+++|++|+|+||++|||+.||++ +++|+. +|+++|||+|++|.|++.++...+++|+.+++.|....
T Consensus 215 ~aL~~aL~~g~i~~A~LDV~~~EP~~-~~~l~~-~nvi~TPHiag~t~e~~~~~~~~~~~nl~~~l~g~~~~ 284 (380)
T 2o4c_A 215 QALRRLLEGGADLEVALDVWEGEPQA-DPELAA-RCLIATPHIAGYSLEGKLRGTAQIYQAYCAWRGIAERV 284 (380)
T ss_dssp HHHHHHHHTTCCEEEEESCCTTTTSC-CHHHHT-TCSEECSSCTTCCHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred HHHHHHHHhCCCceEEeeeeccCCCC-chhhcc-CCEEEccccCcCCHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 99999999999999999999999964 678886 59999999999999999999999999999999988643
No 36
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=100.00 E-value=1.2e-37 Score=339.89 Aligned_cols=271 Identities=18% Similarity=0.194 Sum_probs=230.8
Q ss_pred CCceEEE-EcCcccCccChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCC
Q 007512 120 GRLKVVG-RAGVGIDNVDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGK 198 (600)
Q Consensus 120 ~~Lk~I~-~~g~G~d~iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gk 198 (600)
++++.|+ .+++|+|++ ++|+++||.|+|+|++|+ ++|| +++|++....+.++.| |.+ +.+.++.||
T Consensus 192 ~~l~gi~eet~~Gvd~l--~a~~~~Gilv~p~~~vn~-sVae-------~l~r~~~~~~~~l~~g-w~r--~~~~~l~Gk 258 (479)
T 1v8b_A 192 KKIIGVSEETTTGVLRL--KKMDKQNELLFTAINVND-AVTK-------QKYDNVYGCRHSLPDG-LMR--ATDFLISGK 258 (479)
T ss_dssp TTCCEEEECSHHHHHHH--HHHHHTTCCCSEEEECTT-SHHH-------HTTHHHHHHHHHHHHH-HHH--HHCCCCTTS
T ss_pred cCeEEEEEeeCccHhHH--HHHHHcCCEEeccCCccH-HHHH-------HHHhchHhHHHHHhhh-hhh--ccccccCCC
Confidence 4899998 889999998 899999999999999999 9999 4578999999999988 975 457899999
Q ss_pred EEEEEecChhHHHHHHHhhcCCCEEEEECCCCCh-hHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccC
Q 007512 199 TLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPA-DRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKM 277 (600)
Q Consensus 199 tiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~-~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~m 277 (600)
+|||||+|.||+++|+++++|||+|++||++... ..+...|+...++++++++||+|++|+ .|+++++++.|+.|
T Consensus 259 tVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~~~l~ell~~aDiVi~~~----~t~~lI~~~~l~~M 334 (479)
T 1v8b_A 259 IVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCT----GNVDVIKLEHLLKM 334 (479)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECC----SSSSSBCHHHHTTC
T ss_pred EEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEecCHHHHHhcCCEEEECC----ChhhhcCHHHHhhc
Confidence 9999999999999999999999999999998743 356677888889999999999999995 68999999999999
Q ss_pred CCceEEEEccCCcc-ccHHHHHH--hHhcCCceEEEEeccCCCCCCCCCccccC--CcEEEcCCCC-CCcHH-HHHHHHH
Q 007512 278 KKGVRIINVARGGV-IDEEALVR--ALDSGRVAQAALDVFTEEPPPADSKLVQH--ERVTVTPHLG-ASTME-AQEGVAI 350 (600)
Q Consensus 278 k~gailvNvarg~i-vde~aL~~--aL~~g~i~ga~lDv~~~EP~~~~~~L~~~--~nvilTPH~~-~~t~e-a~~~~~~ 350 (600)
|+|++|||+|||++ ||+++|.+ +|++|+|+ +++|+| |++.++|||.+ +|+++| |+| +++.+ ++..++.
T Consensus 335 K~gailiNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~---plp~~~~l~~l~~~nvv~t-H~atghp~e~~~~s~a~ 409 (479)
T 1v8b_A 335 KNNAVVGNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRI---TLPNGNKIIVLARGRLLNL-GCATGHPAFVMSFSFCN 409 (479)
T ss_dssp CTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEE---ECTTSCEEEEEGGGSBHHH-HSSCCSCHHHHHHHHHH
T ss_pred CCCcEEEEeCCCCccccchhhhccccceeeeEe-eeEEEE---ECCCCCeeeEecCCCEEEE-eccCCCCchhHHHHHHH
Confidence 99999999999999 99999999 99999997 999998 33457899988 999999 999 66766 7888999
Q ss_pred HHHHHHHHHHcCC--CCCccccCCCCChhhhhcccchHHHHHHHHHHHHHHhcCCCCceEEEEEEeecCC
Q 007512 351 EIAEAVVGALKGE--LAATAVNAPMVPAEVLTELKPFVELAEKLGRLAVQLVAGGSGVKTVKVSYASSRA 418 (600)
Q Consensus 351 ~~~~~l~~~l~g~--~~~~~vn~~~i~~~~~~~~~p~~~la~~lG~l~~qL~~g~~~~k~v~i~~~Gs~a 418 (600)
++++|+..|++|+ .+.+.|+. ++..+-+.+.+ +.| +++|....||..+ ..+.+.+.+.|.+.
T Consensus 410 ~~~~ni~~~~~g~~~~l~n~V~~--lp~~~de~va~-l~L-~~lG~~l~~lt~~--q~~yi~v~~~g~~~ 473 (479)
T 1v8b_A 410 QTFAQLDLWQNKDTNKYENKVYL--LPKHLDEKVAL-YHL-KKLNASLTELDDN--QCQFLGVNKSGPFK 473 (479)
T ss_dssp HHHHHHHHHHTTTSSSCCSSEEC--CCHHHHHHHHH-HHH-GGGTCCCCCCCHH--HHHHHTCCTTSCCS
T ss_pred HHHHHHHHHHcCCCCcCCcceEe--CChhhHHHHHH-HHH-HHcCChHhhcChh--hhhhEeeeeCCCCC
Confidence 9999999999998 77776662 34445555666 344 6666666666655 45566677777776
No 37
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=100.00 E-value=6.5e-38 Score=343.04 Aligned_cols=271 Identities=19% Similarity=0.230 Sum_probs=227.3
Q ss_pred CCceEEE-EcCcccCccChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCC
Q 007512 120 GRLKVVG-RAGVGIDNVDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGK 198 (600)
Q Consensus 120 ~~Lk~I~-~~g~G~d~iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gk 198 (600)
+++|.|+ .+++|+|++ ++|+++||.|+|+|++|+ +|||+ ++|++....+.++.| |.+ +.|.++.||
T Consensus 212 ~~l~gi~eet~~Gvd~l--~a~~~~Gilv~n~~~vn~-sVae~-------l~r~~~~~~~~l~~g-w~~--~~g~~L~Gk 278 (494)
T 3d64_A 212 AHIKGVTEETTTGVHRL--YQMEKDGRLPFPAFNVND-SVTKS-------KFDNLYGCRESLVDG-IKR--ATDVMIAGK 278 (494)
T ss_dssp TTCCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHH-------HHHHHHHHHTTHHHH-HHH--HHCCCCTTC
T ss_pred hCcEEEEEEcccCHhhH--HHHHHCCCEEEECCCccH-HHHHH-------HHhhhHhhhhhhhhh-hhh--ccccccCCC
Confidence 4899998 889999998 899999999999999999 99994 458888777777777 864 467899999
Q ss_pred EEEEEecChhHHHHHHHhhcCCCEEEEECCCCChh-HHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccC
Q 007512 199 TLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPAD-RARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKM 277 (600)
Q Consensus 199 tiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~-~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~m 277 (600)
|+||||+|.||+.+|+++++|||+|++||++.... .+...|+...++++++++||+|++|+ .|+++|+++.|+.|
T Consensus 279 tVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~~l~ell~~aDiVi~~~----~t~~lI~~~~l~~M 354 (494)
T 3d64_A 279 IAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTAT----GNYHVINHDHMKAM 354 (494)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECS----SSSCSBCHHHHHHC
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEeCCHHHHHhcCCEEEECC----CcccccCHHHHhhC
Confidence 99999999999999999999999999999987432 45566888889999999999999997 58999999999999
Q ss_pred CCceEEEEccCCcc-ccHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccC--CcEEEcCCCC-CCcHH-HHHHHHHHH
Q 007512 278 KKGVRIINVARGGV-IDEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQH--ERVTVTPHLG-ASTME-AQEGVAIEI 352 (600)
Q Consensus 278 k~gailvNvarg~i-vde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~--~nvilTPH~~-~~t~e-a~~~~~~~~ 352 (600)
|+|++|||+|||++ ||+++| ++|++|+|+ +++|+ +|++.++|||.+ +|+++| |+| +++.+ ++..++..+
T Consensus 355 K~gAilINvgrg~veID~~aL-~AL~~g~I~-~~~Dv---~plp~~~pL~~l~~~nvv~t-H~atg~~~~~~~~~~a~~~ 428 (494)
T 3d64_A 355 RHNAIVCNIGHFDSEIDVAST-RQYQWENIK-PQVDH---IIFPDGKRVILLAEGRLVNL-GCATGHPSFVMSNSFTNQT 428 (494)
T ss_dssp CTTEEEEECSSSSCSBCCGGG-TTSEEEEEE-TTEEE---EECTTSCEEEEEGGGSBHHH-HTSCCSCHHHHHHHHHHHH
T ss_pred CCCcEEEEcCCCcchhchHHH-HhhhcCccc-eeEEE---EECCCCCchhhcCCCCEEEE-eCcCCCCHHHHHHHHHHHH
Confidence 99999999999999 699999 999999996 55555 577778999998 999999 999 66754 788899999
Q ss_pred HHHHHHHHcCCCCCccccCCCCChhhhhcccchHHHHHHHHHHHHHHhcCCCCceEEEEEEeecCCC
Q 007512 353 AEAVVGALKGELAATAVNAPMVPAEVLTELKPFVELAEKLGRLAVQLVAGGSGVKTVKVSYASSRAP 419 (600)
Q Consensus 353 ~~~l~~~l~g~~~~~~vn~~~i~~~~~~~~~p~~~la~~lG~l~~qL~~g~~~~k~v~i~~~Gs~a~ 419 (600)
++|+..|++|..+.+.|+. ++.++-+.+.+ +.| +++|....||..+ ..+-+.+.+.|.+.+
T Consensus 429 ~~ni~~~~~g~~~~n~V~~--lp~~~d~~va~-l~L-~~~g~~~~~l~~~--q~~y~~v~~~g~~~~ 489 (494)
T 3d64_A 429 LAQIELFTRGGEYANKVYV--LPKHLDEKVAR-LHL-ARIGAQLSELSDD--QAAYIGVSKAGPFKP 489 (494)
T ss_dssp HHHHHHHHHGGGSCSSEEE--CCHHHHHHHHH-HHH-TTTTCCCCCCCHH--HHHHHTCCTTSCCSC
T ss_pred HHHHHHHHcCCCCCCceee--CChhHHHHHHH-HHH-HHcCChHHhhChh--hHHhEeeccCCCCCc
Confidence 9999999999988888862 34455555555 455 6677666666665 556666777777763
No 38
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.95 E-value=5.4e-28 Score=249.91 Aligned_cols=207 Identities=20% Similarity=0.229 Sum_probs=168.9
Q ss_pred CCCCCeEEEecC--CCHhHHHHhccc-CcEEEccC----------CCHhHHhhhcCCceEEEEc----------------
Q 007512 55 ISSKPTVLIAEK--LGQAGLDLLNEF-ANVDCAYN----------LSPEELCTKISLCDALIVR---------------- 105 (600)
Q Consensus 55 ~~~~~~ilv~~~--l~~~~~~~l~~~-~~v~~~~~----------~~~~el~~~i~~~d~li~~---------------- 105 (600)
++.++||++... ......+.|++. .+|.+... ...+++.+.++++|+++++
T Consensus 2 ~~~~m~i~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~~~~~~ 81 (293)
T 3d4o_A 2 MLTGKHVVIIGGDARQLEIIRKLSTFDAKISLVGFDQLDDGFIGVTKMRIDEVDWNTVDAILLPISGTNEAGKVDTIFSN 81 (293)
T ss_dssp CCTTCEEEEECBCHHHHHHHHHHHHTTCEEEEESCTTCC--CTTCEEECGGGCCGGGCSEEECCTTCCCTTCBCCBSSCS
T ss_pred CccCcEEEEECCCHHHHHHHHHHHhCCCEEEEeccccccccccccccccchHHHHhcCCEEEeccccccCCceeeccccc
Confidence 567789998863 334456667664 36654321 1125667778899999985
Q ss_pred CCCCCCHHHHhccCCCceEEEEcCcccCccCh-hHHHhCCceeecCC------CCChHHHHHHHHHHHHHHHhchHHHHH
Q 007512 106 SGTKVNRDVFESSAGRLKVVGRAGVGIDNVDL-AAATEFGCLVVNAP------TANTVAAAEHGIALLAAMARNVAQADA 178 (600)
Q Consensus 106 ~~~~~~~~~l~~~~~~Lk~I~~~g~G~d~iD~-~aa~~~GI~V~n~p------~~~~~~vAE~~l~lll~~~R~i~~~~~ 178 (600)
..+++++++++++ |+||+|+ +|+||+|+ ++|+++||.|+|+| ++|+.++||++++++|..
T Consensus 82 ~~~~~~~~~l~~~-~~l~~i~---~G~d~id~~~~~~~~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~--------- 148 (293)
T 3d4o_A 82 ESIVLTEEMIEKT-PNHCVVY---SGISNTYLNQCMKKTNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQH--------- 148 (293)
T ss_dssp CCCBCCHHHHHTS-CTTCEEE---ESSCCHHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHH---------
T ss_pred CCccchHHHHHhC-CCCCEEE---ecCCCHHHHHHHHHcCCeEEEecCCceeeeeccHhHHHHHHHHHHHh---------
Confidence 3456899999998 5999997 89999998 89999999999998 899999999999988852
Q ss_pred HHHcCccccccccceeccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHHcCCcc---cCHHHHhccCCE
Q 007512 179 SVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARAIGVDL---VSFDEAIATADF 254 (600)
Q Consensus 179 ~~~~g~W~~~~~~g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~~g~~~---~~l~ell~~aDv 254 (600)
.+.++.|+++||||+|.||+.+|++++++|++|++||++.. .+.+.+.|+.. .++++++++||+
T Consensus 149 ------------~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDv 216 (293)
T 3d4o_A 149 ------------TDFTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDV 216 (293)
T ss_dssp ------------CSSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSE
T ss_pred ------------cCCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCE
Confidence 25689999999999999999999999999999999999863 23445667654 368899999999
Q ss_pred EEEecCCCccccccccHhHhccCCCceEEEEccCCcc
Q 007512 255 ISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGV 291 (600)
Q Consensus 255 V~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~i 291 (600)
|++|+|. ++++++.++.||+++++||++||+.
T Consensus 217 Vi~~~p~-----~~i~~~~l~~mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 217 CINTIPA-----LVVTANVLAEMPSHTFVIDLASKPG 248 (293)
T ss_dssp EEECCSS-----CCBCHHHHHHSCTTCEEEECSSTTC
T ss_pred EEECCCh-----HHhCHHHHHhcCCCCEEEEecCCCC
Confidence 9999995 6788999999999999999999754
No 39
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.92 E-value=1.4e-25 Score=232.51 Aligned_cols=211 Identities=17% Similarity=0.201 Sum_probs=163.1
Q ss_pred CCCCCeEEEecC--CCHhHHHHhcccC-cEEEccCCC-----------HhHHhhhcCCceEEEEc---C-----------
Q 007512 55 ISSKPTVLIAEK--LGQAGLDLLNEFA-NVDCAYNLS-----------PEELCTKISLCDALIVR---S----------- 106 (600)
Q Consensus 55 ~~~~~~ilv~~~--l~~~~~~~l~~~~-~v~~~~~~~-----------~~el~~~i~~~d~li~~---~----------- 106 (600)
+++.+||++... ......+.|.+.+ +|.+. ..+ .+++.+.+.++|+++++ .
T Consensus 4 ~~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~-~~~~~~~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~a 82 (300)
T 2rir_A 4 MLTGLKIAVIGGDARQLEIIRKLTEQQADIYLV-GFDQLDHGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVFS 82 (300)
T ss_dssp CCCSCEEEEESBCHHHHHHHHHHHHTTCEEEEE-SCTTSSCCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSSC
T ss_pred cccCCEEEEECCCHHHHHHHHHHHhCCCEEEEE-eccccccccccceeccchHHHHhcCCEEEeccccccCCcccccccc
Confidence 456678998865 3344556666543 55543 222 12356678899999972 1
Q ss_pred CCC--CCHHHHhccCCCceEEEEcCcccCccC-hhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcC
Q 007512 107 GTK--VNRDVFESSAGRLKVVGRAGVGIDNVD-LAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAG 183 (600)
Q Consensus 107 ~~~--~~~~~l~~~~~~Lk~I~~~g~G~d~iD-~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g 183 (600)
.++ +++++++.+ |++|+|+ +|+||+| +++|+++||.|+|+|++++ + +++|+++.+ +|
T Consensus 83 ~~~~~~~~~~l~~~-~~l~~i~---~g~~~~d~~~~~~~~gi~v~~~~~~~~--v---------~~~r~~~~~-----~g 142 (300)
T 2rir_A 83 NEEVVLKQDHLDRT-PAHCVIF---SGISNAYLENIAAQAKRKLVKLFERDD--I---------AIYNSIPTV-----EG 142 (300)
T ss_dssp SSCEECCHHHHHTS-CTTCEEE---ESSCCHHHHHHHHHTTCCEEEGGGSHH--H---------HHHHHHHHH-----HH
T ss_pred cCCccchHHHHhhc-CCCCEEE---EecCCHHHHHHHHHCCCEEEeecCCCc--e---------EEEcCccHH-----HH
Confidence 356 899999987 5899998 8999999 9999999999999999753 2 345666554 45
Q ss_pred ccccc-cccceeccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCCh-hHHHHcCCc---ccCHHHHhccCCEEEEe
Q 007512 184 KWQRN-KYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPA-DRARAIGVD---LVSFDEAIATADFISLH 258 (600)
Q Consensus 184 ~W~~~-~~~g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~-~~a~~~g~~---~~~l~ell~~aDvV~l~ 258 (600)
.|... ...+.++.|+|+||||+|.||+.+|++++++|++|++||++... +.+.+.|+. ..++++++++||+|++|
T Consensus 143 ~~~~~~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~ 222 (300)
T 2rir_A 143 TIMLAIQHTDYTIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINT 222 (300)
T ss_dssp HHHHHHHTCSSCSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEEC
T ss_pred HHHHHHHhcCCCCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEEC
Confidence 67532 23578999999999999999999999999999999999998632 333455765 34789999999999999
Q ss_pred cCCCccccccccHhHhccCCCceEEEEccCCcc
Q 007512 259 MPLTPATSKVLNDETFGKMKKGVRIINVARGGV 291 (600)
Q Consensus 259 ~Pl~~~t~~li~~~~l~~mk~gailvNvarg~i 291 (600)
+|. ++++++.++.||+|+++||++||+.
T Consensus 223 ~p~-----~~i~~~~~~~mk~g~~lin~a~g~~ 250 (300)
T 2rir_A 223 IPS-----MILNQTVLSSMTPKTLILDLASRPG 250 (300)
T ss_dssp CSS-----CCBCHHHHTTSCTTCEEEECSSTTC
T ss_pred CCh-----hhhCHHHHHhCCCCCEEEEEeCCCC
Confidence 996 6788899999999999999999764
No 40
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.92 E-value=2.7e-27 Score=259.82 Aligned_cols=271 Identities=21% Similarity=0.192 Sum_probs=204.5
Q ss_pred CceEE-EEcCcccCccChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCE
Q 007512 121 RLKVV-GRAGVGIDNVDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKT 199 (600)
Q Consensus 121 ~Lk~I-~~~g~G~d~iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gkt 199 (600)
+++-+ -.+|+|||++ .++.++||.++|+++.|. ++||+ ++|++....+.+..+ |.+. .+..+.|++
T Consensus 210 ~i~GvveetgtGVd~l--~a~~~~Gilv~~~~~vn~-sVae~-------~~r~l~~~~~s~~~g-~~r~--~~~~l~Gkt 276 (494)
T 3ce6_A 210 SVKGVTEETTTGVLRL--YQFAAAGDLAFPAINVND-SVTKS-------KFDNKYGTRHSLIDG-INRG--TDALIGGKK 276 (494)
T ss_dssp HCCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHH-------TTHHHHHHHHHHHHH-HHHH--HCCCCTTCE
T ss_pred CeEEEEEEeCCChhHH--HHHHHcCCEEEecCCccH-HHHHH-------HHhhhhhhhhhhhHH-HHhc--cCCCCCcCE
Confidence 34444 4789999998 788999999999999999 99994 346666655555555 6542 355789999
Q ss_pred EEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCC
Q 007512 200 LAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMK 278 (600)
Q Consensus 200 iGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk 278 (600)
|+|+|+|.||+.+|++++++|++|+++|++. ..+.+.+.|+...++++++++||+|+.|++ +.++++.+.++.||
T Consensus 277 V~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aDvVi~atg----t~~~i~~~~l~~mk 352 (494)
T 3ce6_A 277 VLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTATG----NKDIIMLEHIKAMK 352 (494)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHGGGCSEEEECSS----SSCSBCHHHHHHSC
T ss_pred EEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEEecHHHHHhCCCEEEECCC----CHHHHHHHHHHhcC
Confidence 9999999999999999999999999999987 335677889887899999999999999986 56688888999999
Q ss_pred CceEEEEccCCcc-ccHHHHHH-hHhcCCceEEEEeccCCCCCCCCCccccCCcEE----EcCCCCCCcHHHHHHHHHHH
Q 007512 279 KGVRIINVARGGV-IDEEALVR-ALDSGRVAQAALDVFTEEPPPADSKLVQHERVT----VTPHLGASTMEAQEGVAIEI 352 (600)
Q Consensus 279 ~gailvNvarg~i-vde~aL~~-aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvi----lTPH~~~~t~ea~~~~~~~~ 352 (600)
+|++++|+||++. +|+++|.+ +++++.|. +++|+|+.+|....-.|+..++++ +|||+++.+.+.. ..++
T Consensus 353 ~ggilvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~~~~~l~LL~~grlvnL~~~TPH~a~~~~~s~---~~qa 428 (494)
T 3ce6_A 353 DHAILGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSF---ANQT 428 (494)
T ss_dssp TTCEEEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTTTCCEEEEEGGGSCHHHHHSCCSCHHHHHHHH---HHHH
T ss_pred CCcEEEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCCcchHHHHHhCCCEEeccCCCCCccccchHHH---HHHH
Confidence 9999999999998 89999988 78888886 567988764321112367778887 9999988877653 6788
Q ss_pred HHHHHHHHcCCCCCccccCCCCChhhhhcccchHHHHHHHHHHHHHHhcCCCCceEEEEEEeecCC
Q 007512 353 AEAVVGALKGELAATAVNAPMVPAEVLTELKPFVELAEKLGRLAVQLVAGGSGVKTVKVSYASSRA 418 (600)
Q Consensus 353 ~~~l~~~l~g~~~~~~vn~~~i~~~~~~~~~p~~~la~~lG~l~~qL~~g~~~~k~v~i~~~Gs~a 418 (600)
.+++..+.++....+.|. +.++..++.-.++.| ..+|....+|..+ ..+-+.+.+.|.|.
T Consensus 429 ~~ai~~~~~g~~~~~~V~---~~P~~~De~vA~lhL-~~lg~~l~~lt~~--q~~y~~v~~~G~~k 488 (494)
T 3ce6_A 429 IAQIELWTKNDEYDNEVY---RLPKHLDEKVARIHV-EALGGHLTKLTKE--QAEYLGVDVEGPYK 488 (494)
T ss_dssp HHHHHHHHTGGGCCSSEE---CCCHHHHHHHHHHHH-HHHTCCCCCCCHH--HHHHHTCCTTSCCS
T ss_pred HHHHHHHHcCCCCCCEEE---ECHHHHHHHHHHhhH-HHHHHHHHHhChh--HHHHcccccCCCCC
Confidence 899999999876666553 222223222222344 4555444555544 34445555666665
No 41
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.89 E-value=2.3e-22 Score=214.96 Aligned_cols=245 Identities=17% Similarity=0.185 Sum_probs=183.0
Q ss_pred CCHhHHHHhcccC-cEEEc------cCCCHhHHh-----------hhcCCceEEEEcCCCCCCHHHHhccCCCceEEEEc
Q 007512 67 LGQAGLDLLNEFA-NVDCA------YNLSPEELC-----------TKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRA 128 (600)
Q Consensus 67 l~~~~~~~l~~~~-~v~~~------~~~~~~el~-----------~~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~ 128 (600)
+.|++.+.|.+.+ +|.+. ..++.++.. +.+.++|++ +....++++++.... ++..++...
T Consensus 18 ltP~~v~~L~~~G~~V~ve~~ag~~~~f~d~~y~~aGa~i~~~~~~~~~~adii-~~vk~p~~~e~~~l~-~~~~l~~~~ 95 (377)
T 2vhw_A 18 ITPAGVAELTRRGHEVLIQAGAGEGSAITDADFKAAGAQLVGTADQVWADADLL-LKVKEPIAAEYGRLR-HGQILFTFL 95 (377)
T ss_dssp CCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEESCHHHHHHHCSEE-ECSSCCCGGGGGGCC-TTCEEEECC
T ss_pred cCHHHHHHHHhCCCEEEEeCCCCcCCCCCHHHHHHCCCEEecCHHHHhccCCEE-EEeCCCChHHHhhcC-CCCEEEEEe
Confidence 5777777776654 55542 345666554 234568966 455566766666654 578888888
Q ss_pred CcccCccChhHHHhCCceee----------cCCCCChHHHHHHHHHHHHHHH-hchHHHHHHHHcCccccccccceeccC
Q 007512 129 GVGIDNVDLAAATEFGCLVV----------NAPTANTVAAAEHGIALLAAMA-RNVAQADASVKAGKWQRNKYVGVSLVG 197 (600)
Q Consensus 129 g~G~d~iD~~aa~~~GI~V~----------n~p~~~~~~vAE~~l~lll~~~-R~i~~~~~~~~~g~W~~~~~~g~~l~g 197 (600)
..++|..+++++.++||.++ |.|.+++ .||++..+++.+. |++. ..+.|+|.... ...++.|
T Consensus 96 ~~~~~~~~l~~l~~~gi~~ia~e~v~~~~~~~p~~s~--~ae~ag~~a~~~a~r~l~----~~~~g~~~~~~-~~~~l~g 168 (377)
T 2vhw_A 96 HLAASRACTDALLDSGTTSIAYETVQTADGALPLLAP--MSEVAGRLAAQVGAYHLM----RTQGGRGVLMG-GVPGVEP 168 (377)
T ss_dssp CGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHH--HHHHHHHHHHHHHHHHTS----GGGTSCCCCTT-CBTTBCC
T ss_pred cccCCHHHHHHHHHcCCeEEEeeeccccCCCccccCc--hHHHHHHHHHHHHHHHHH----HhcCCCccccc-CCCCCCC
Confidence 88999999999999999997 6676654 5599985554444 7663 33445543211 1136899
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHH-cCCc-------ccCHHHHhccCCEEEEec--CCCcccc
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARA-IGVD-------LVSFDEAIATADFISLHM--PLTPATS 266 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~-~g~~-------~~~l~ell~~aDvV~l~~--Pl~~~t~ 266 (600)
++++|+|+|.||+.+|+.++++|++|+++|++.. .+.+.+ .|.. ..+++++++++|+|+.|+ |.+ ++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~-~t~ 247 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGA-KAP 247 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTS-CCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCC-CCc
Confidence 9999999999999999999999999999999863 233443 4543 235778899999999977 544 688
Q ss_pred ccccHhHhccCCCceEEEEcc--CCccccHHHHHHhHhcCCceEEEEeccCC-CCCCCCCccccCCcEE--EcCCCCCCc
Q 007512 267 KVLNDETFGKMKKGVRIINVA--RGGVIDEEALVRALDSGRVAQAALDVFTE-EPPPADSKLVQHERVT--VTPHLGAST 341 (600)
Q Consensus 267 ~li~~~~l~~mk~gailvNva--rg~ivde~aL~~aL~~g~i~ga~lDv~~~-EP~~~~~~L~~~~nvi--lTPH~~~~t 341 (600)
++++++.++.||+|++|||++ +|+ ||+. ||.+.+.|++..++++ +|||+++.+
T Consensus 248 ~li~~~~l~~mk~g~~iV~va~~~Gg----------------------v~e~~ep~~~~~~~~~~~~v~i~~~phl~~~~ 305 (377)
T 2vhw_A 248 KLVSNSLVAHMKPGAVLVDIAIDQGG----------------------CFEGSRPTTYDHPTFAVHDTLFYCVANMPASV 305 (377)
T ss_dssp CCBCHHHHTTSCTTCEEEEGGGGTTC----------------------SBTTCCCBCSSSCEEEETTEEEECBTTGGGGS
T ss_pred ceecHHHHhcCCCCcEEEEEecCCCC----------------------ccccccCCCCCCCEEEECCEEEEecCCcchhh
Confidence 999999999999999999998 332 6777 8877788999999998 999999988
Q ss_pred HH
Q 007512 342 ME 343 (600)
Q Consensus 342 ~e 343 (600)
..
T Consensus 306 ~~ 307 (377)
T 2vhw_A 306 PK 307 (377)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 42
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=99.77 E-value=1.8e-18 Score=184.31 Aligned_cols=276 Identities=16% Similarity=0.163 Sum_probs=176.4
Q ss_pred CCHhHHHHhcccC-cEEEc------cCCCHhHHhh----------hcCCceEEEEcCCCCCCHHHHhccCCCceEEEEcC
Q 007512 67 LGQAGLDLLNEFA-NVDCA------YNLSPEELCT----------KISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAG 129 (600)
Q Consensus 67 l~~~~~~~l~~~~-~v~~~------~~~~~~el~~----------~i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g 129 (600)
+.|++.+.|.+.+ +|.+. ..++.++..+ .+ ++|+++ ....++. +.++.+++++++|+...
T Consensus 18 l~P~~v~~L~~~g~~v~ve~~ag~~~~~~d~~y~~aga~i~~~~~~~-~ad~il-~vk~p~~-~~~~~l~~~~~~~~~~~ 94 (369)
T 2eez_A 18 LTPGGVESLVRRGHTVLVERGAGEGSGLSDAEYARAGAELVGREEAW-GAEMVV-KVKEPLP-EEYGFLREGLILFTYLH 94 (369)
T ss_dssp SCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECHHHHT-TSSEEE-CSSCCCG-GGGGGCCTTCEEEECCC
T ss_pred cCHHHHHHHHhCCCEEEEeCCCCccCCCCHHHHHHCCCEEeccccee-cCCEEE-EECCCCH-HHHhhcCCCcEEEEEec
Confidence 5778888776654 55542 3566666654 45 899866 4445554 44666667899999999
Q ss_pred cccCccChhHHHhCCceee---cCCCC-Ch----HHHHHHHH--HHHHHHHhchHHHHHHHHcCccccccccceeccCCE
Q 007512 130 VGIDNVDLAAATEFGCLVV---NAPTA-NT----VAAAEHGI--ALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKT 199 (600)
Q Consensus 130 ~G~d~iD~~aa~~~GI~V~---n~p~~-~~----~~vAE~~l--~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gkt 199 (600)
.+.|+.+++++.++||.++ +.+.. .. .++++.+- +.++++ +.+..... .++.|... ..++.+++
T Consensus 95 ~~~~~~~~~~l~~~gi~~ia~e~~~~~~~~~~~l~~~s~~ag~~av~~a~-~~l~~~~~--g~~~~~~~---~~~l~~~~ 168 (369)
T 2eez_A 95 LAADRGLTEAMLRSGVTGIAYETVQLPDGTLPLLVPMSEVAGRMAPQVGA-QFLEKPKG--GRGVLLGG---VPGVAPAS 168 (369)
T ss_dssp GGGCHHHHHHHHHHTCEEEEGGGCCCTTCCCTTTHHHHHHHHHHHHHHHH-HHTSGGGT--SCCCCTTC---BTBBCCCE
T ss_pred ccCCHHHHHHHHHCCCeEEEeeccccccCCeeecccchHHHHHHHHHHHH-HHHHHhcC--CCceecCC---CCCCCCCE
Confidence 9999999999999999998 55442 11 33444333 433332 22222110 01123221 13789999
Q ss_pred EEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHH-cCCc-------ccCHHHHhccCCEEEEecCCCc-cccccc
Q 007512 200 LAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARA-IGVD-------LVSFDEAIATADFISLHMPLTP-ATSKVL 269 (600)
Q Consensus 200 iGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~-~g~~-------~~~l~ell~~aDvV~l~~Pl~~-~t~~li 269 (600)
++|+|.|.||+.+|+.++++|++|+++|++.. .+.+.+ .|.. ..+++++++++|+|+.|+|... .+..++
T Consensus 169 V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~~~li 248 (369)
T 2eez_A 169 VVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKAPKLV 248 (369)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC-------CCS
T ss_pred EEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCccccchhH
Confidence 99999999999999999999999999998763 233333 4543 2357788899999999999765 577888
Q ss_pred cHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEE---------EcCCCCCC
Q 007512 270 NDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVT---------VTPHLGAS 340 (600)
Q Consensus 270 ~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvi---------lTPH~~~~ 340 (600)
.++.++.||+|.+|||++.. . +|+ +|++ ||.+.+.|++..+++. .|||.++.
T Consensus 249 ~~~~l~~mk~gg~iV~v~~~-------------~---gg~-~d~~--ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~ 309 (369)
T 2eez_A 249 TRDMLSLMKEGAVIVDVAVD-------------Q---GGC-VETI--RPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTF 309 (369)
T ss_dssp CHHHHTTSCTTCEEEECC--------------------------------------CEETTEEEECCSCSGGGSHHHHHH
T ss_pred HHHHHHhhcCCCEEEEEecC-------------C---CCC-CCcc--cCCCCCCCEEEECCEEEEeeCCcchhcHHHHHH
Confidence 99999999999999999821 1 244 8988 6655678899889998 78998764
Q ss_pred --cHHHHHHHHHHHHHHHHHHHcCCCCCcccc
Q 007512 341 --TMEAQEGVAIEIAEAVVGALKGELAATAVN 370 (600)
Q Consensus 341 --t~ea~~~~~~~~~~~l~~~l~g~~~~~~vn 370 (600)
+.+....+...+.+++..++.+....+.+|
T Consensus 310 ~~~~~~~~~l~~l~~~g~~~~~~~~~l~~~~~ 341 (369)
T 2eez_A 310 ALTNQTLPYVLKLAEKGLDALLEDAALLKGLN 341 (369)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHSCHHHHTTEE
T ss_pred HHHHHHHHHHHHHHhcChhhhhcChHHhcCEE
Confidence 455566666666677755666655555555
No 43
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.75 E-value=4.1e-18 Score=183.46 Aligned_cols=220 Identities=15% Similarity=0.186 Sum_probs=154.7
Q ss_pred CCHhHHHHhcccC-cEEEc------cCCCHhHHhhh---------cCCceEEEEcCCCCCCHHHHhccCCCceEEEEcCc
Q 007512 67 LGQAGLDLLNEFA-NVDCA------YNLSPEELCTK---------ISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGV 130 (600)
Q Consensus 67 l~~~~~~~l~~~~-~v~~~------~~~~~~el~~~---------i~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~ 130 (600)
+.|+..+.|...+ +|.+. ..++.++..+. +-++|+++.. .. .+.+.++.+++++++|+..+.
T Consensus 25 ltP~~v~~L~~~G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~~~~~~adiil~v-k~-p~~~~i~~l~~~~~li~~~~~ 102 (401)
T 1x13_A 25 ATPKTVEQLLKLGFTVAVESGAGQLASFDDKAFVQAGAEIVEGNSVWQSEIILKV-NA-PLDDEIALLNPGTTLVSFIWP 102 (401)
T ss_dssp CCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECGGGGGSSSEEECS-SC-CCHHHHTTCCTTCEEEECCCG
T ss_pred CCHHHHHHHHHCCCEEEEEECCCcccCCChHHHHHCCCEEeccHHHhcCCeEEEe-CC-CCHHHHHHhcCCCcEEEEecC
Confidence 4666666665543 44442 34555554421 3338987743 23 356778877679999999999
Q ss_pred ccCccChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHH--HHHHHcCcccccc-ccce-----eccCCEEEE
Q 007512 131 GIDNVDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQA--DASVKAGKWQRNK-YVGV-----SLVGKTLAV 202 (600)
Q Consensus 131 G~d~iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~--~~~~~~g~W~~~~-~~g~-----~l~gktiGI 202 (600)
|+|++|++++.++||.|++ .++++|++.++.|.+++.+... +..++.+.|.... +.+. ++.|++|+|
T Consensus 103 ~~d~~~~~al~~~gI~v~~-----~e~v~~~~~a~~l~~l~~~a~~ag~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~V 177 (401)
T 1x13_A 103 AQNPELMQKLAERNVTVMA-----MDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAGKVPPAKVMV 177 (401)
T ss_dssp GGCHHHHHHHHHTTCEEEE-----GGGCCCSGGGGGGCHHHHHHHHHHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEE
T ss_pred CCCHHHHHHHHHCCCEEEE-----eehhhhhhhhcccchHHHHHHHHHHHHHHHHHHhcccccCCceeeccCcCCCEEEE
Confidence 9999999999999999964 4556666655533222222221 2333333332111 1111 688999999
Q ss_pred EecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc----------------------------CHHHHhccCC
Q 007512 203 LGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV----------------------------SFDEAIATAD 253 (600)
Q Consensus 203 IGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~----------------------------~l~ell~~aD 253 (600)
+|+|.||..+++.++++|++|+++|++. ..+.+.+.|...+ +++++++.+|
T Consensus 178 iGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~aD 257 (401)
T 1x13_A 178 IGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKEVD 257 (401)
T ss_dssp ECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHHCS
T ss_pred ECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999987 3455667776543 2678888999
Q ss_pred EEEEe--cCCCccccccccHhHhccCCCceEEEEcc--CCccccH
Q 007512 254 FISLH--MPLTPATSKVLNDETFGKMKKGVRIINVA--RGGVIDE 294 (600)
Q Consensus 254 vV~l~--~Pl~~~t~~li~~~~l~~mk~gailvNva--rg~ivde 294 (600)
+|+.| +|. ..+..+++++.++.||+|++|||++ ||+.+++
T Consensus 258 vVI~~~~~pg-~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~ 301 (401)
T 1x13_A 258 IIVTTALIPG-KPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEY 301 (401)
T ss_dssp EEEECCCCTT-SCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred EEEECCccCC-CCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCc
Confidence 99999 553 3466889999999999999999999 8887654
No 44
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.75 E-value=2.2e-19 Score=193.69 Aligned_cols=155 Identities=21% Similarity=0.327 Sum_probs=123.7
Q ss_pred ccee-ccCCEEEEEecChhHHHHHHHhhc-CCCEEEEE-CCCCChhHHHHcCCcccCHHHHhccCCE-EEEecCCCcccc
Q 007512 191 VGVS-LVGKTLAVLGFGKVGSEVARRAKG-LGMHVIAH-DPYAPADRARAIGVDLVSFDEAIATADF-ISLHMPLTPATS 266 (600)
Q Consensus 191 ~g~~-l~gktiGIIGlG~IG~~vA~~l~~-~g~~V~~~-d~~~~~~~a~~~g~~~~~l~ell~~aDv-V~l~~Pl~~~t~ 266 (600)
.|.+ |.|||+||+|+|+||+.+|+++++ |||+|++| |++... .+...++++++++.+|. .++ +|+ ++|+
T Consensus 205 ~G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~~-----~~~~gvdl~~L~~~~d~~~~l-~~l-~~t~ 277 (419)
T 1gtm_A 205 LGWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGI-----YNPDGLNADEVLKWKNEHGSV-KDF-PGAT 277 (419)
T ss_dssp TTCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEE-----EEEEEECHHHHHHHHHHHSSS-TTC-TTSE
T ss_pred hCCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCccc-----cCccCCCHHHHHHHHHhcCEe-ecC-ccCe
Confidence 3667 999999999999999999999999 99999999 555311 11123367777765553 233 576 5788
Q ss_pred ccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCceEEEEeccCCCCCCCC-CccccCCcEEEcCCC----C---
Q 007512 267 KVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRVAQAALDVFTEEPPPAD-SKLVQHERVTVTPHL----G--- 338 (600)
Q Consensus 267 ~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~-~~L~~~~nvilTPH~----~--- 338 (600)
+ ++.+.|..||+ .++|||+||.++|+++ +++|+.+.|++++ +||++.+ ++||..+|+++|||+ |
T Consensus 278 ~-i~~~~l~~mk~-dilIn~ArG~~Vde~a-~~aL~~~~I~~aA-----neP~t~~a~~ll~~~~V~itPhiaaNaGGvt 349 (419)
T 1gtm_A 278 N-ITNEELLELEV-DVLAPAAIEEVITKKN-ADNIKAKIVAEVA-----NGPVTPEADEILFEKGILQIPDFLCNAGGVT 349 (419)
T ss_dssp E-ECHHHHHHSCC-SEEEECSCSCCBCTTG-GGGCCCSEEECCS-----SSCBCHHHHHHHHHTTCEEECHHHHTTHHHH
T ss_pred e-eCHHHHHhCCC-CEEEECCCcccCCHHH-HHHhcCCEEEEee-----CCCCCcchHHHHhcCCEEEECchhhhCCcce
Confidence 8 78888999998 5999999999999999 6899999999887 8987644 689999999999999 6
Q ss_pred --------------CCcHHHHHHHHHHHHHHHHHHH
Q 007512 339 --------------ASTMEAQEGVAIEIAEAVVGAL 360 (600)
Q Consensus 339 --------------~~t~ea~~~~~~~~~~~l~~~l 360 (600)
+.+.|.++++...+.+++.+++
T Consensus 350 ~s~~E~~qn~~~~~w~~~ev~~~l~~~m~~~~~~~~ 385 (419)
T 1gtm_A 350 VSYFEWVQNITGYYWTIEEVRERLDKKMTKAFYDVY 385 (419)
T ss_dssp HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeehhhhcccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 5667777777776677777766
No 45
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.73 E-value=8.8e-19 Score=182.76 Aligned_cols=249 Identities=15% Similarity=0.117 Sum_probs=176.9
Q ss_pred eccCCEEEEEecChhHHHHHHHhhcCCC--EEEEECCCC-ChhHHHHcCCc---ccCHHH-HhccCCEEEEecCCCcccc
Q 007512 194 SLVGKTLAVLGFGKVGSEVARRAKGLGM--HVIAHDPYA-PADRARAIGVD---LVSFDE-AIATADFISLHMPLTPATS 266 (600)
Q Consensus 194 ~l~gktiGIIGlG~IG~~vA~~l~~~g~--~V~~~d~~~-~~~~a~~~g~~---~~~l~e-ll~~aDvV~l~~Pl~~~t~ 266 (600)
++..++|||||+|.||+++|+.|+..|+ +|++||++. ..+.+.+.|+. ..++++ ++++||+|++|+|... +.
T Consensus 30 ~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~~-~~ 108 (314)
T 3ggo_A 30 SLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRT-FR 108 (314)
T ss_dssp CCSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGGG-HH
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHHH-HH
Confidence 4556899999999999999999999998 999999987 45566777772 347888 8999999999999553 44
Q ss_pred ccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCceEEEEeccCCC---CCCCCCccccCCcEEEcCCCCCCcHH
Q 007512 267 KVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRVAQAALDVFTEE---PPPADSKLVQHERVTVTPHLGASTME 343 (600)
Q Consensus 267 ~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i~ga~lDv~~~E---P~~~~~~L~~~~nvilTPH~~~~t~e 343 (600)
.++ ++....++++++|+|+++.+....+++.+.+....+.+.- +++.| |..+...||+...+++||+-++. .+
T Consensus 109 ~vl-~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~~~v~~hP--m~G~e~sG~~~A~~~Lf~g~~~il~~~~~~~-~~ 184 (314)
T 3ggo_A 109 EIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGGHP--IAGTEKSGVEYSLDNLYEGKKVILTPTKKTD-KK 184 (314)
T ss_dssp HHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEECEEE--CCCCCCCSGGGCCTTTTTTCEEEECCCTTSC-HH
T ss_pred HHH-HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCCCEEecCc--ccCCcccchhhhhhhhhcCCEEEEEeCCCCC-HH
Confidence 444 4455669999999999987654455666656553343322 23332 22456689999999999985433 33
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCccccCCCCChhhhhccc--chHHHHHHHHHHH---------HHHhcCCCCceEEEEE
Q 007512 344 AQEGVAIEIAEAVVGALKGELAATAVNAPMVPAEVLTELK--PFVELAEKLGRLA---------VQLVAGGSGVKTVKVS 412 (600)
Q Consensus 344 a~~~~~~~~~~~l~~~l~g~~~~~~vn~~~i~~~~~~~~~--p~~~la~~lG~l~---------~qL~~g~~~~k~v~i~ 412 (600)
.. +.+.++++..+....+..+..++..+..++ ||+.....+..+. .+++++ +|++++++
T Consensus 185 ~~--------~~v~~l~~~~G~~v~~~~~~~hD~~~a~~s~lph~~a~~l~~~~~~~~~~~~~~~~~a~~--~frd~tRi 254 (314)
T 3ggo_A 185 RL--------KLVKRVWEDVGGVVEYMSPELHDYVFGVVSHLPHAVAFALVDTLIHMSTPEVDLFKYPGG--GFKDFTRI 254 (314)
T ss_dssp HH--------HHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSCCGGGCCTT--TTTTHHHH
T ss_pred HH--------HHHHHHHHHcCCEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHhhccc--cHHHHHHH
Confidence 33 444555554444444445556666676666 7775444444332 246667 89999999
Q ss_pred EeecCCCCccccccccHHHHHhhchhhhccchhhccHHHHHhhcCc
Q 007512 413 YASSRAPDDLDTRLLRAMITKGLIEPISDVFVNLVNADYTAKQRGL 458 (600)
Q Consensus 413 ~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vn~vnA~~~A~e~GI 458 (600)
+.+++. +|.++...|+..+...|+.+..+...+.++..-.+..++
T Consensus 255 a~~~p~-~w~di~~~N~~~~~~~l~~~~~~l~~l~~~l~~~d~~~l 299 (314)
T 3ggo_A 255 AKSDPI-MWRDIFLENKENVMKAIEGFEKSLNHLKELIVREAEEEL 299 (314)
T ss_dssp TTSCHH-HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTCSHHH
T ss_pred hcCCHH-HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 999998 999999999998888898888876777777665444333
No 46
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.72 E-value=4.9e-17 Score=174.09 Aligned_cols=221 Identities=17% Similarity=0.204 Sum_probs=154.2
Q ss_pred CCHhHHHHhcccC-cEEEc------cCCCHhHHh-----------hhcCCceEEEEcCCCCC----CHHHHhccCCCceE
Q 007512 67 LGQAGLDLLNEFA-NVDCA------YNLSPEELC-----------TKISLCDALIVRSGTKV----NRDVFESSAGRLKV 124 (600)
Q Consensus 67 l~~~~~~~l~~~~-~v~~~------~~~~~~el~-----------~~i~~~d~li~~~~~~~----~~~~l~~~~~~Lk~ 124 (600)
+.|+..+.|.+.+ +|.+. ..++.++.. +.+.++|+++.. ..++ +++.++.+++++++
T Consensus 18 l~P~~v~~L~~~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~~~adiil~v-~~p~~~~~~~~~i~~l~~~~~~ 96 (384)
T 1l7d_A 18 ISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKV-QRPMTAEEGTDEVALIKEGAVL 96 (384)
T ss_dssp CCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHHSSCSEEEEE-ECCCCGGGSCCGGGGSCTTCEE
T ss_pred CCHHHHHHHHhCCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhhcCCCEEEEe-cCcccccCCHHHHHhhccCCEE
Confidence 5677777776554 44441 345555544 346789998865 3455 68888888768999
Q ss_pred EEEcCcccCccChhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccc-----cc-eeccCC
Q 007512 125 VGRAGVGIDNVDLAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKY-----VG-VSLVGK 198 (600)
Q Consensus 125 I~~~g~G~d~iD~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~-----~g-~~l~gk 198 (600)
|+..+.+.|+.|++++.++||.++|.. .....+++..+. +|+..+.+ ..+..+..+.|.-..+ .+ .++.|+
T Consensus 97 i~~~~~~~~~~~~~~~~~~gi~~~~~e-~~~~~~~~~~l~-~l~~~a~~-ag~~av~~~~~~~~~~~~~~~~~~~~l~g~ 173 (384)
T 1l7d_A 97 MCHLGALTNRPVVEALTKRKITAYAME-LMPRISRAQSMD-ILSSQSNL-AGYRAVIDGAYEFARAFPMMMTAAGTVPPA 173 (384)
T ss_dssp EEECCGGGCHHHHHHHHHTTCEEEEGG-GCCCSGGGGGGC-HHHHHHHH-HHHHHHHHHHHHCSSCSSCEEETTEEECCC
T ss_pred EEEecccCCHHHHHHHHHCCCEEEEec-cccccccccccc-hhhHHHHH-HHHHHHHHHHHHhhhcccchhccCCCCCCC
Confidence 999999999999999999999999742 111112222333 22222222 2223333333421111 12 478999
Q ss_pred EEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc---C---------------------------HHH
Q 007512 199 TLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV---S---------------------------FDE 247 (600)
Q Consensus 199 tiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~---~---------------------------l~e 247 (600)
+++|+|.|.||..+++.++++|++|+++|++. ..+.+.++|...+ . +++
T Consensus 174 ~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~ 253 (384)
T 1l7d_A 174 RVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLK 253 (384)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHH
Confidence 99999999999999999999999999999987 4456667776543 1 778
Q ss_pred HhccCCEEEEec--CCCccccccccHhHhccCCCceEEEEcc--CCccc
Q 007512 248 AIATADFISLHM--PLTPATSKVLNDETFGKMKKGVRIINVA--RGGVI 292 (600)
Q Consensus 248 ll~~aDvV~l~~--Pl~~~t~~li~~~~l~~mk~gailvNva--rg~iv 292 (600)
+++.+|+|+.|+ |.. .+.++++++.++.||+|++|+|++ ||+.+
T Consensus 254 ~~~~aDvVi~~~~~pg~-~~~~li~~~~l~~mk~g~vivdva~~~gg~~ 301 (384)
T 1l7d_A 254 ELVKTDIAITTALIPGK-PAPVLITEEMVTKMKPGSVIIDLAVEAGGNC 301 (384)
T ss_dssp HHTTCSEEEECCCCTTS-CCCCCSCHHHHTTSCTTCEEEETTGGGTCSS
T ss_pred HhCCCCEEEECCccCCC-CCCeeeCHHHHhcCCCCCEEEEEecCCCCCe
Confidence 889999999888 433 256788999999999999999999 76643
No 47
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.72 E-value=3.7e-17 Score=175.67 Aligned_cols=211 Identities=17% Similarity=0.253 Sum_probs=147.7
Q ss_pred hHHHHhcccC-cEEEccCCCHhHHh----hhc------CCceEEEEcCCCCCCHHHHhccC---CCceEEE-EcCcccCc
Q 007512 70 AGLDLLNEFA-NVDCAYNLSPEELC----TKI------SLCDALIVRSGTKVNRDVFESSA---GRLKVVG-RAGVGIDN 134 (600)
Q Consensus 70 ~~~~~l~~~~-~v~~~~~~~~~el~----~~i------~~~d~li~~~~~~~~~~~l~~~~---~~Lk~I~-~~g~G~d~ 134 (600)
.....|.+.+ .|.-....+.||.. +.+ ...|.++ .-+..++.-+-...+ ++++-+. -.++|+..
T Consensus 83 ~~aaal~~~gi~v~a~~ge~~~ey~~~~~~~l~~~~~~~~p~~il-DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~r 161 (436)
T 3h9u_A 83 HAAAAIAKRGIPVFAWKGETEEEYMWCMKQTLKGFSGDGYPNMLL-DDGGDLTNYVLDECKELDGKIYGVSEETTTGVKN 161 (436)
T ss_dssp HHHHHHHHTTCCEEECTTCCHHHHHHHHHHTTSCBTTTBCCSEEE-ESSSHHHHHHHHHC-CCTTTCCCEEECSHHHHHH
T ss_pred HHHHHHHhcCCeEEEeCCCCHHHHHHHHHHHHHhcccCCCCceEe-ccccHHHHHHHHHhHHHHhhccceeeccCcChHH
Confidence 3344454443 44333445665542 223 1345444 444445544433321 2344443 35778766
Q ss_pred cC-hhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecChhHHHHH
Q 007512 135 VD-LAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVA 213 (600)
Q Consensus 135 iD-~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~IG~~vA 213 (600)
.. +.++.+.+|+|+|++.+.+....+...+..-++.+.+.. ..+.++.||++||+|+|.||+.+|
T Consensus 162 L~~~~~~g~L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~r--------------atg~~L~GktVgIiG~G~IG~~vA 227 (436)
T 3h9u_A 162 LYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKR--------------ATDVMIAGKTACVCGYGDVGKGCA 227 (436)
T ss_dssp HHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHH--------------HHCCCCTTCEEEEECCSHHHHHHH
T ss_pred HHHHHHcCCCCCceEeechhhhhhhhhccccchHHHHHHHHH--------------hcCCcccCCEEEEEeeCHHHHHHH
Confidence 54 456678999999999877766555444433333222211 136789999999999999999999
Q ss_pred HHhhcCCCEEEEECCCC-ChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCcc-
Q 007512 214 RRAKGLGMHVIAHDPYA-PADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGV- 291 (600)
Q Consensus 214 ~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~i- 291 (600)
++|++||++|++||+++ ....+...|+..+++++++++||+|++ ++.|+++++++.|+.||+|++|+|+|||.+
T Consensus 228 ~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~eal~~ADVVil----t~gt~~iI~~e~l~~MK~gAIVINvgRg~vE 303 (436)
T 3h9u_A 228 AALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVVEEAHIFVT----TTGNDDIITSEHFPRMRDDAIVCNIGHFDTE 303 (436)
T ss_dssp HHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEE----CSSCSCSBCTTTGGGCCTTEEEEECSSSGGG
T ss_pred HHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHHHHhhCCEEEE----CCCCcCccCHHHHhhcCCCcEEEEeCCCCCc
Confidence 99999999999999986 334566788888899999999999997 345889999999999999999999999997
Q ss_pred ccHHHHHH
Q 007512 292 IDEEALVR 299 (600)
Q Consensus 292 vde~aL~~ 299 (600)
+|.++|.+
T Consensus 304 ID~~~L~~ 311 (436)
T 3h9u_A 304 IQVAWLKA 311 (436)
T ss_dssp BCHHHHHH
T ss_pred cCHHHHHh
Confidence 89998865
No 48
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.67 E-value=1.5e-18 Score=182.77 Aligned_cols=256 Identities=12% Similarity=0.052 Sum_probs=174.9
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCcc-cCHHHHhcc----CCEEEEecCCCcccccccc
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDL-VSFDEAIAT----ADFISLHMPLTPATSKVLN 270 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~-~~l~ell~~----aDvV~l~~Pl~~~t~~li~ 270 (600)
-++|||||+|+||+++|+.|+..|++|++||++. ..+.+.+.|+.. .++++++++ ||+|++|+|. ..+..++.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~-~~~~~vl~ 86 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPM-TAIDSLLD 86 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCH-HHHHHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCH-HHHHHHHH
Confidence 3589999999999999999999999999999886 456677788864 478887765 6999999994 45666663
Q ss_pred HhHhccCCCceEEEEccCCccccHHHHHHhHhc-CCceEEEEeccCCC---CCCCCCccccCCcEEEcCCCCCCcHHHHH
Q 007512 271 DETFGKMKKGVRIINVARGGVIDEEALVRALDS-GRVAQAALDVFTEE---PPPADSKLVQHERVTVTPHLGASTMEAQE 346 (600)
Q Consensus 271 ~~~l~~mk~gailvNvarg~ivde~aL~~aL~~-g~i~ga~lDv~~~E---P~~~~~~L~~~~nvilTPH~~~~t~ea~~ 346 (600)
.+..++++++|+|++..+....+++.+.+.. ..+.+.- +++.| |..++..||+..++++||+-+... +...
T Consensus 87 --~l~~~~~~~iv~Dv~Svk~~i~~~~~~~~~~~~~v~~HP--maG~e~sG~~aa~~~Lf~g~~~iltp~~~~~~-e~~~ 161 (341)
T 3ktd_A 87 --AVHTHAPNNGFTDVVSVKTAVYDAVKARNMQHRYVGSHP--MAGTANSGWSASMDGLFKRAVWVVTFDQLFDG-TDIN 161 (341)
T ss_dssp --HHHHHCTTCCEEECCSCSHHHHHHHHHTTCGGGEECEEE--CCSCC-CCGGGCCSSTTTTCEEEECCGGGTSS-CCCC
T ss_pred --HHHccCCCCEEEEcCCCChHHHHHHHHhCCCCcEecCCc--cccccccchhhhhhHHhcCCeEEEEeCCCCCh-hhhc
Confidence 2344689999999987665334444444432 2332221 23322 224567899999999999854332 2000
Q ss_pred HHHHHHHHHHHHHHcCCCCCccccCCCCChhhhhccc--chHHHHHHHHH------HHHHHhcCCCCceEEEEEEeecCC
Q 007512 347 GVAIEIAEAVVGALKGELAATAVNAPMVPAEVLTELK--PFVELAEKLGR------LAVQLVAGGSGVKTVKVSYASSRA 418 (600)
Q Consensus 347 ~~~~~~~~~l~~~l~g~~~~~~vn~~~i~~~~~~~~~--p~~~la~~lG~------l~~qL~~g~~~~k~v~i~~~Gs~a 418 (600)
.-+....+.+..+++..+.......+..++..+..++ ||+.....+.. .+.+|+++ +|+++++++.+++.
T Consensus 162 ~~~~~~~~~v~~l~~~~Ga~v~~~~~~~HD~~~A~vshlPh~ia~aL~~~~~~~~~~~~~laa~--gfrd~tRia~s~p~ 239 (341)
T 3ktd_A 162 STWISIWKDVVQMALAVGAEVVPSRVGPHDAAAARVSHLTHILAETLAIVGDNGGALSLSLAAG--SYRDSTRVAGTDPG 239 (341)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTHHHHHHHCCH--HHHHHTGGGGSCHH
T ss_pred cchHHHHHHHHHHHHHcCCEEEEeCHHHHHHHHHHHhHHHHHHHHHHHHHhhcchHHHHHHccc--cHHHHHHHhcCCHH
Confidence 0011234556666655554445555666777777776 87655443332 34568787 89999999999998
Q ss_pred CCccccccccHHHHHhhchhhhccchhhccHHHHHhhcCceEEE
Q 007512 419 PDDLDTRLLRAMITKGLIEPISDVFVNLVNADYTAKQRGLRLTE 462 (600)
Q Consensus 419 ~~~~~~~~~~~a~l~GlL~~~~~~~vn~vnA~~~A~e~GI~v~~ 462 (600)
+|.++...|+..+...|+.+.++...+.++..-.+ .++.-.|
T Consensus 240 -lw~di~~~N~~~~~~~l~~~~~~L~~l~~~l~~~d-~~l~~~~ 281 (341)
T 3ktd_A 240 -LVRAMCESNAGPLVKALDEALAILHEAREGLTAEQ-PNIEQLA 281 (341)
T ss_dssp -HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTSSS-CCCHHHH
T ss_pred -HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHccc-HHHHHHH
Confidence 99999999998888888888887666666665444 4444333
No 49
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=99.67 E-value=2e-16 Score=169.77 Aligned_cols=159 Identities=22% Similarity=0.251 Sum_probs=118.9
Q ss_pred ceEEE-EcCcccCccC-hhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCE
Q 007512 122 LKVVG-RAGVGIDNVD-LAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKT 199 (600)
Q Consensus 122 Lk~I~-~~g~G~d~iD-~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gkt 199 (600)
++-+. -.++|+-++- +...-+..++++|+..+.+.+--+ ....+.+.+..+.. ...+.++.|||
T Consensus 184 i~G~~EeTtTGv~rL~~m~~~g~L~~PvinVnds~tK~~fD----n~yG~~eslvdgI~----------Ratg~~L~GKT 249 (464)
T 3n58_A 184 IKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFD----NKYGCKESLVDGIR----------RGTDVMMAGKV 249 (464)
T ss_dssp CCEEEECSHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTH----HHHHHHHHHHHHHH----------HHHCCCCTTCE
T ss_pred ccceeeccccchHHHHHHHHcCCCCCCEEeeccHhhhhhhh----hhhcchHHHHHHHH----------HhcCCcccCCE
Confidence 44443 3577776642 233345678888887655544333 22222222222111 12467999999
Q ss_pred EEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCC
Q 007512 200 LAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMK 278 (600)
Q Consensus 200 iGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk 278 (600)
+||+|+|.||+.+|+++++|||+|+++|+++ ....+...|++.+++++++++||+|+++. .|+++|+++.|+.||
T Consensus 250 VgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv~LeElL~~ADIVv~at----gt~~lI~~e~l~~MK 325 (464)
T 3n58_A 250 AVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTTT----GNKDVITIDHMRKMK 325 (464)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECCHHHHGGGCSEEEECC----SSSSSBCHHHHHHSC
T ss_pred EEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceeccHHHHHhhCCEEEECC----CCccccCHHHHhcCC
Confidence 9999999999999999999999999998865 23445667888889999999999999864 378999999999999
Q ss_pred CceEEEEccCCcc-ccHHHHH
Q 007512 279 KGVRIINVARGGV-IDEEALV 298 (600)
Q Consensus 279 ~gailvNvarg~i-vde~aL~ 298 (600)
+|++|||+|||.+ +|.++|.
T Consensus 326 ~GAILINvGRgdvEID~~aL~ 346 (464)
T 3n58_A 326 DMCIVGNIGHFDNEIQVAALR 346 (464)
T ss_dssp TTEEEEECSSSTTTBTCGGGT
T ss_pred CCeEEEEcCCCCcccCHHHHH
Confidence 9999999999998 8888875
No 50
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=99.61 E-value=3.1e-17 Score=176.74 Aligned_cols=210 Identities=17% Similarity=0.177 Sum_probs=162.7
Q ss_pred CCceEEEEcCcccCccChhHHH-----hCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccc----cc
Q 007512 120 GRLKVVGRAGVGIDNVDLAAAT-----EFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRN----KY 190 (600)
Q Consensus 120 ~~Lk~I~~~g~G~d~iD~~aa~-----~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~----~~ 190 (600)
+.+++|.+.|+|+|++++.++. ++++.++|.+|+ ...++++.+.+++.+.|++....... .+.|... ..
T Consensus 80 ~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~-~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~~av~~ 157 (404)
T 1gpj_A 80 EAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGT-LDEALKIVFRRAINLGKRAREETRIS-EGAVSIGSAAVEL 157 (404)
T ss_dssp HHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHHHHHHH
T ss_pred hHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCC-chHHHHHHHHHHhhhhccCcchhhhc-CCCccHHHHHHHH
Confidence 3688999999999999999888 899999999888 57899999999999999987765333 4455321 00
Q ss_pred cc---eeccCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCCCh--hHHHHcCCcc---cCHHHHhccCCEEEEecCC
Q 007512 191 VG---VSLVGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYAPA--DRARAIGVDL---VSFDEAIATADFISLHMPL 261 (600)
Q Consensus 191 ~g---~~l~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~~~--~~a~~~g~~~---~~l~ell~~aDvV~l~~Pl 261 (600)
.+ .++.|++++|||+|.||+.+++.++.+|+ +|+++|+.... +.+.+.|... .++.+++.++|+|+.|+|.
T Consensus 158 a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~ 237 (404)
T 1gpj_A 158 AERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAA 237 (404)
T ss_dssp HHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSS
T ss_pred HHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCC
Confidence 01 14789999999999999999999999999 99999987632 3455667643 3677888999999999874
Q ss_pred CccccccccHhHhcc--C----CCceEEEEccCCccccHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEE--
Q 007512 262 TPATSKVLNDETFGK--M----KKGVRIINVARGGVIDEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTV-- 333 (600)
Q Consensus 262 ~~~t~~li~~~~l~~--m----k~gailvNvarg~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvil-- 333 (600)
+ ..+++...+.. | +++.+++|++ +|.+.+++++++||+++
T Consensus 238 ~---~~~~~~~~l~~~~lk~r~~~~~v~vdia-----------------------------~P~~i~~~l~~l~~v~l~d 285 (404)
T 1gpj_A 238 P---HPVIHVDDVREALRKRDRRSPILIIDIA-----------------------------NPRDVEEGVENIEDVEVRT 285 (404)
T ss_dssp S---SCCBCHHHHHHHHHHCSSCCCEEEEECC-----------------------------SSCSBCTTGGGSTTEEEEE
T ss_pred C---CceecHHHHHHHHHhccCCCCEEEEEcc-----------------------------CCCCCCccccccCCeEEEe
Confidence 4 45667777766 3 2566777765 36555789999999999
Q ss_pred cCCCCCCcHHHHH----------HHHHHHHHHHHHHHcCC
Q 007512 334 TPHLGASTMEAQE----------GVAIEIAEAVVGALKGE 363 (600)
Q Consensus 334 TPH~~~~t~ea~~----------~~~~~~~~~l~~~l~g~ 363 (600)
+||+++.+.++++ .+..+.++++..|+.+.
T Consensus 286 ~d~l~~~~~~~~~~r~~~~~~~~~li~q~~~~f~~w~~~~ 325 (404)
T 1gpj_A 286 IDDLRVIARENLERRRKEIPKVEKLIEEELSTVEEELEKL 325 (404)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999998887754 45556677777887754
No 51
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.59 E-value=3.5e-15 Score=159.97 Aligned_cols=159 Identities=20% Similarity=0.280 Sum_probs=119.1
Q ss_pred CceEEE-EcCcccCccC-hhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCC
Q 007512 121 RLKVVG-RAGVGIDNVD-LAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGK 198 (600)
Q Consensus 121 ~Lk~I~-~~g~G~d~iD-~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gk 198 (600)
+++-+. -.++|+-++- +...-+..++|+|..++.+...-+...+.--++...+.. ..+..+.||
T Consensus 156 ~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~vnds~tK~~fDn~yGt~~s~~~gi~r--------------at~~~L~Gk 221 (435)
T 3gvp_A 156 KIKGIVEESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRESILDGLKR--------------TTDMMFGGK 221 (435)
T ss_dssp TCCEEEECCHHHHHHHTCC--CCCCCSCEEECTTCHHHHHHHTHHHHHHHHHHHHHH--------------HHCCCCTTC
T ss_pred hcceeEeccchhHHHHHHHHHcCCCCCCEEEecchhhhhhhhhhhhhHHHHHHHHHH--------------hhCceecCC
Confidence 344443 3577776553 334446789999998877766555322211111111111 136789999
Q ss_pred EEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccC
Q 007512 199 TLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKM 277 (600)
Q Consensus 199 tiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~m 277 (600)
+++|+|+|.||+.+|+++++||++|+++|+++ ....+...|+...++++++++||+|++| +.|+++++.+.|+.|
T Consensus 222 tV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~~Leeal~~ADIVi~a----tgt~~lI~~e~l~~M 297 (435)
T 3gvp_A 222 QVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNEVIRQVDIVITC----TGNKNVVTREHLDRM 297 (435)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEEC----SSCSCSBCHHHHHHS
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEeccHHHHHhcCCEEEEC----CCCcccCCHHHHHhc
Confidence 99999999999999999999999999999876 3345667788888999999999999995 457899999999999
Q ss_pred CCceEEEEccCCcc-ccHHHH
Q 007512 278 KKGVRIINVARGGV-IDEEAL 297 (600)
Q Consensus 278 k~gailvNvarg~i-vde~aL 297 (600)
|+|++|+|+|||.+ +|.++|
T Consensus 298 K~gailINvgrg~~EId~~~L 318 (435)
T 3gvp_A 298 KNSCIVCNMGHSNTEIDVASL 318 (435)
T ss_dssp CTTEEEEECSSTTTTBTGGGG
T ss_pred CCCcEEEEecCCCccCCHHHH
Confidence 99999999999987 566655
No 52
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.55 E-value=2e-15 Score=153.93 Aligned_cols=237 Identities=15% Similarity=0.124 Sum_probs=151.1
Q ss_pred CEEEEEecChhHHHHHHHhhcCCC--EEEEECCCC-ChhHHHHcCCc---ccCHHHHhc-cCCEEEEecCCCcccccccc
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGM--HVIAHDPYA-PADRARAIGVD---LVSFDEAIA-TADFISLHMPLTPATSKVLN 270 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~--~V~~~d~~~-~~~~a~~~g~~---~~~l~ell~-~aDvV~l~~Pl~~~t~~li~ 270 (600)
++|||||+|.||+.+|+.|+..|+ +|++||++. ..+.+.+.|+. ..+++++++ +||+|++|+|.. .+..++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~~ 80 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFREIAK 80 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH-HHHHHHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH-HHHHHHH
Confidence 589999999999999999998888 999999986 34455566764 237888999 999999999944 4555553
Q ss_pred HhHhccCCCceEEEEccCCccccHHHHHHhHhcCCceEEEEeccCCC---CCCCCCccccCCcEEEcCCCCCCcHHHHHH
Q 007512 271 DETFGKMKKGVRIINVARGGVIDEEALVRALDSGRVAQAALDVFTEE---PPPADSKLVQHERVTVTPHLGASTMEAQEG 347 (600)
Q Consensus 271 ~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i~ga~lDv~~~E---P~~~~~~L~~~~nvilTPH~~~~t~ea~~~ 347 (600)
+....++++++|+|++++.....+.+.+.+.++.+.+ .-+++.| |..+..+|+...+++++||.++. .+..
T Consensus 81 -~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~~v~~--~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~-~~~~-- 154 (281)
T 2g5c_A 81 -KLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGG--HPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTD-KKRL-- 154 (281)
T ss_dssp -HHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEECE--EEECCCSCCSGGGCCSSTTTTCEEEECCCSSSC-HHHH--
T ss_pred -HHHhhCCCCcEEEECCCCcHHHHHHHHHhccccceee--ccccCCccCChhhhhhHHhCCCCEEEecCCCCC-HHHH--
Confidence 3455689999999999887656677777776643322 1233333 33345678888899999997655 3322
Q ss_pred HHHHHHHHHHHHHcCCCCCccccCCCCChhhhhccc--chH---HHHHHHHH------HHHHHhcCCCCceEEEEEEeec
Q 007512 348 VAIEIAEAVVGALKGELAATAVNAPMVPAEVLTELK--PFV---ELAEKLGR------LAVQLVAGGSGVKTVKVSYASS 416 (600)
Q Consensus 348 ~~~~~~~~l~~~l~g~~~~~~vn~~~i~~~~~~~~~--p~~---~la~~lG~------l~~qL~~g~~~~k~v~i~~~Gs 416 (600)
+.+.++++..........+..++..+.... |+. .+.+.++. .+.+|+++ ++++++....++
T Consensus 155 ------~~v~~l~~~~g~~~~~~~~~~~d~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~r~~~~~ 226 (281)
T 2g5c_A 155 ------KLVKRVWEDVGGVVEYMSPELHDYVFGVVSHLPHAVAFALVDTLIHMSTPEVDLFKYPGG--GFKDFTRIAKSD 226 (281)
T ss_dssp ------HHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCBTTBCGGGCCTT--TGGGC---CCSC
T ss_pred ------HHHHHHHHHcCCEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhhccc--cHHHHhHHhcCC
Confidence 344444444333332333333333333333 433 23333332 23445555 798888888888
Q ss_pred CCCCccccccccHHHHHhhchhhhccchhhccHH
Q 007512 417 RAPDDLDTRLLRAMITKGLIEPISDVFVNLVNAD 450 (600)
Q Consensus 417 ~a~~~~~~~~~~~a~l~GlL~~~~~~~vn~vnA~ 450 (600)
+. +|.+...++..-+...|+.+..+.-.+.++.
T Consensus 227 p~-~~~~~~~sn~~~~~~~l~~~~~~l~~~~~~i 259 (281)
T 2g5c_A 227 PI-MWRDIFLENKENVMKAIEGFEKSLNHLKELI 259 (281)
T ss_dssp HH-HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
Confidence 87 8988888888655444545544333444443
No 53
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.42 E-value=1.9e-14 Score=147.30 Aligned_cols=237 Identities=17% Similarity=0.136 Sum_probs=148.6
Q ss_pred CEEEEEecChhHHHHHHHhhcC--CCEEEEECCCC-ChhHHHHcCCc---ccCHHHHhccCCEEEEecCCCccccccccH
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL--GMHVIAHDPYA-PADRARAIGVD---LVSFDEAIATADFISLHMPLTPATSKVLND 271 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~--g~~V~~~d~~~-~~~~a~~~g~~---~~~l~ell~~aDvV~l~~Pl~~~t~~li~~ 271 (600)
++|||||+|.||+.+|+.|... |++|++||++. ..+.+.+.|+. ..++++++++||+|++|+|... ...++.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~-~~~v~~- 84 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKK-TIDFIK- 84 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHH-HHHHHH-
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHH-HHHHHH-
Confidence 6899999999999999999855 78999999876 33444556662 3478888999999999999443 455553
Q ss_pred hHhcc-CCCceEEEEccCCccccHHHHHHhHhc-C-CceE----EEEeccCCCCCCCCCccccCCcEEEcCCCCCCcHHH
Q 007512 272 ETFGK-MKKGVRIINVARGGVIDEEALVRALDS-G-RVAQ----AALDVFTEEPPPADSKLVQHERVTVTPHLGASTMEA 344 (600)
Q Consensus 272 ~~l~~-mk~gailvNvarg~ivde~aL~~aL~~-g-~i~g----a~lDv~~~EP~~~~~~L~~~~nvilTPH~~~~t~ea 344 (600)
+.... ++++++|+|++++.....+.+.+.+.+ + ++.+ ++.++.+ |......+++.++++++||.++.. +.
T Consensus 85 ~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~g--~~~a~~~l~~g~~~~~~~~~~~~~-~~ 161 (290)
T 3b1f_A 85 ILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKSG--AVAANVNLFENAYYIFSPSCLTKP-NT 161 (290)
T ss_dssp HHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC-----CC--TTSCCTTTTTTSEEEEEECTTCCT-TH
T ss_pred HHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCcCCCCcch--HHHhhHHHhCCCeEEEecCCCCCH-HH
Confidence 34556 899999999998776556777777765 2 2222 3333333 334456888889999999976552 22
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCccccCCCCChhhhhc---ccchHH--HHHHH---H---HHHHHHhcCCCCceEEEEEE
Q 007512 345 QEGVAIEIAEAVVGALKGELAATAVNAPMVPAEVLTE---LKPFVE--LAEKL---G---RLAVQLVAGGSGVKTVKVSY 413 (600)
Q Consensus 345 ~~~~~~~~~~~l~~~l~g~~~~~~vn~~~i~~~~~~~---~~p~~~--la~~l---G---~l~~qL~~g~~~~k~v~i~~ 413 (600)
.+.+.++++.......+..+..++..+.. +.|... +.+.+ | ..+.+|+++ ++++++..+
T Consensus 162 --------~~~v~~l~~~~G~~~~~~~~~~~d~~~a~~s~~~~~~a~~~~~~~~~~g~~~~~~~~la~~--~~~~~~rla 231 (290)
T 3b1f_A 162 --------IPALQDLLSGLHARYVEIDAAEHDCVTSQISHFPHIIASSLMKQAGDFSESHEMTKHFAAG--GFRDMTRIA 231 (290)
T ss_dssp --------HHHHHHHTGGGCCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCTHHHHHCCH--HHHHTTGGG
T ss_pred --------HHHHHHHHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHHHHHHHHHhcccchhhHHhhccc--cHHhhhhhh
Confidence 24556666554433222222222222222 223221 22222 2 234566666 777776666
Q ss_pred eecCCCCccccccccHHHHHhhchhhhccchhhccHH
Q 007512 414 ASSRAPDDLDTRLLRAMITKGLIEPISDVFVNLVNAD 450 (600)
Q Consensus 414 ~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vn~vnA~ 450 (600)
.+++. +|.+...++..-+...|+.+..+.-.+.++.
T Consensus 232 ~~~p~-~~~~~~~~n~~~~~~~l~~~~~~l~~~~~~l 267 (290)
T 3b1f_A 232 ESEPG-MWTSILLTNQEAVLDRIENFKQRLDEVSNLI 267 (290)
T ss_dssp GSCHH-HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHH-HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
Confidence 67776 8888888888766666656555433444444
No 54
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.40 E-value=2e-14 Score=148.42 Aligned_cols=237 Identities=13% Similarity=0.074 Sum_probs=142.5
Q ss_pred HHHHHHHHcCccccccccceeccCCEEEEEe-cChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccC
Q 007512 174 AQADASVKAGKWQRNKYVGVSLVGKTLAVLG-FGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATA 252 (600)
Q Consensus 174 ~~~~~~~~~g~W~~~~~~g~~l~gktiGIIG-lG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~a 252 (600)
.++..++++..|..... ..++||||| +|.||+++|+.|+..|++|.+||++.. .+..+.+++|
T Consensus 3 ~~~~~~~~~~~~~~~~~-----~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~-----------~~~~~~~~~a 66 (298)
T 2pv7_A 3 RESYANENQFGFKTINS-----DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW-----------AVAESILANA 66 (298)
T ss_dssp ----------CCCCSCT-----TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG-----------GGHHHHHTTC
T ss_pred hhHHhhhhccCccccCC-----CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc-----------cCHHHHhcCC
Confidence 34455667777864321 357899999 999999999999999999999998652 1467888999
Q ss_pred CEEEEecCCCccccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCceEEEEeccCCCCCC-CCCccccCCcE
Q 007512 253 DFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRVAQAALDVFTEEPPP-ADSKLVQHERV 331 (600)
Q Consensus 253 DvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~-~~~~L~~~~nv 331 (600)
|+|++|+|.. .+..++. +....++++++|+|+++.+....+++.+.+. .++ ....|.. +..+++...++
T Consensus 67 DvVilavp~~-~~~~vl~-~l~~~l~~~~iv~~~~svk~~~~~~~~~~~~-~~~-------v~~hP~~g~~~~~~~g~~~ 136 (298)
T 2pv7_A 67 DVVIVSVPIN-LTLETIE-RLKPYLTENMLLADLTSVKREPLAKMLEVHT-GAV-------LGLHPMFGADIASMAKQVV 136 (298)
T ss_dssp SEEEECSCGG-GHHHHHH-HHGGGCCTTSEEEECCSCCHHHHHHHHHHCS-SEE-------EEEEECSCTTCSCCTTCEE
T ss_pred CEEEEeCCHH-HHHHHHH-HHHhhcCCCcEEEECCCCCcHHHHHHHHhcC-CCE-------EeeCCCCCCCchhhcCCeE
Confidence 9999999954 3666664 3455689999999998876644555554432 112 1112221 12357777789
Q ss_pred EEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCccccCCCCChhhhhccc--chH---HHHHHHH------HHHHHHh
Q 007512 332 TVTPHLGASTMEAQEGVAIEIAEAVVGALKGELAATAVNAPMVPAEVLTELK--PFV---ELAEKLG------RLAVQLV 400 (600)
Q Consensus 332 ilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~~vn~~~i~~~~~~~~~--p~~---~la~~lG------~l~~qL~ 400 (600)
++|||. +.+.. +.+.++++.......+..+..++..+..++ |+. .+++.+. ..+.+|+
T Consensus 137 ~l~~~~---~~~~~--------~~v~~l~~~~G~~~~~~~~~~~d~~~a~~~~~p~~~a~~l~~~l~~~g~~~~~~~~la 205 (298)
T 2pv7_A 137 VRCDGR---FPERY--------EWLLEQIQIWGAKIYQTNATEHDHNMTYIQALRHFSTFANGLHLSKQPINLANLLALS 205 (298)
T ss_dssp EEEEEE---CGGGT--------HHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSCCHHHHHHTC
T ss_pred EEecCC---CHHHH--------HHHHHHHHHcCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhc
Confidence 999974 22222 344444544343333333333444444444 654 2333332 3456677
Q ss_pred cCCCCceE----EEEEEeecCCCCccccccccHHHHHhhchhhhccchhhccHHH
Q 007512 401 AGGSGVKT----VKVSYASSRAPDDLDTRLLRAMITKGLIEPISDVFVNLVNADY 451 (600)
Q Consensus 401 ~g~~~~k~----v~i~~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vn~vnA~~ 451 (600)
++ +|++ +++.+.+++. +|.+...++...+. .|+.+..+.-.+.++..
T Consensus 206 ~~--~f~~~~~~~~ria~~~p~-~~~di~~sn~~~~~-~l~~~~~~l~~~~~~l~ 256 (298)
T 2pv7_A 206 SP--IYRLELAMIGRLFAQDAE-LYADIIMDKSENLA-VIETLKQTYDEALTFFE 256 (298)
T ss_dssp CH--HHHHHHHHHHHHHTSCHH-HHHHHHC----CHH-HHHHHHHHHHHHHHHHH
T ss_pred CH--HHHHHHHHHHHHhcCCHH-HHHHHHHHCHHHHH-HHHHHHHHHHHHHHHHH
Confidence 66 7887 7777777887 89998888887777 66666654444444444
No 55
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.25 E-value=4.2e-12 Score=129.05 Aligned_cols=223 Identities=14% Similarity=0.107 Sum_probs=138.6
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCc---ccCHHHHhccCCEEEEecCCCccccccccHhH
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVD---LVSFDEAIATADFISLHMPLTPATSKVLNDET 273 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~---~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~ 273 (600)
++|+|||+|.||+.+|+.|...|++|.+||++. ..+.+.+.|+. ..+++++ ++||+|++|+| ...+..++. +.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~-~~~~~~~~~-~l 77 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTP-IQLILPTLE-KL 77 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSC-HHHHHHHHH-HH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECC-HHHHHHHHH-HH
Confidence 479999999999999999999999999999876 33444556663 3478888 99999999999 344555553 44
Q ss_pred hccCCCceEEEEccCCccccHHHHHHhHhcCCceEEEEeccCC---CCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHH
Q 007512 274 FGKMKKGVRIINVARGGVIDEEALVRALDSGRVAQAALDVFTE---EPPPADSKLVQHERVTVTPHLGASTMEAQEGVAI 350 (600)
Q Consensus 274 l~~mk~gailvNvarg~ivde~aL~~aL~~g~i~ga~lDv~~~---EP~~~~~~L~~~~nvilTPH~~~~t~ea~~~~~~ 350 (600)
...++++++|+|++.......+.+.+.+. ..+ +. .-+++. .|......++....++++|+-+.. .+.
T Consensus 78 ~~~~~~~~~vv~~~~~~~~~~~~~~~~~~-~~~-~~-~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~~-~~~------ 147 (279)
T 2f1k_A 78 IPHLSPTAIVTDVASVKTAIAEPASQLWS-GFI-GG-HPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTD-PEQ------ 147 (279)
T ss_dssp GGGSCTTCEEEECCSCCHHHHHHHHHHST-TCE-EE-EECCCCSCSSGGGCCTTTTTTCEEEEEECTTCC-HHH------
T ss_pred HhhCCCCCEEEECCCCcHHHHHHHHHHhC-CEe-ec-CcccCCccCCHHHHhHHHhCCCcEEEecCCCCC-HHH------
Confidence 55689999999998766655566655443 333 22 123322 232334467777889999975443 332
Q ss_pred HHHHHHHHHHcCCCCCccccCCCCChhhhhccc--chHHHH---HHHH--------HHHHHHhcCCCCceEEEEEEeecC
Q 007512 351 EIAEAVVGALKGELAATAVNAPMVPAEVLTELK--PFVELA---EKLG--------RLAVQLVAGGSGVKTVKVSYASSR 417 (600)
Q Consensus 351 ~~~~~l~~~l~g~~~~~~vn~~~i~~~~~~~~~--p~~~la---~~lG--------~l~~qL~~g~~~~k~v~i~~~Gs~ 417 (600)
.+.+.++++..........+..+.+....++ |+.... ..++ ..+.+|+.+ ++++++....+++
T Consensus 148 --~~~v~~l~~~~g~~~~~~~~~~~~~~~~~~~~~p~~i~~al~~~~~~~~~~~~~~~~~~l~~~--~~~~~~r~~~~~p 223 (279)
T 2f1k_A 148 --LACLRSVLEPLGVKIYLCTPADHDQAVAWISHLPVMVSAALIQACAGEKDGDILKLAQNLASS--GFRDTSRVGGGNP 223 (279)
T ss_dssp --HHHHHHHHGGGTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHTCSCHHHHHHHHHHCCH--HHHHHHTGGGSCH
T ss_pred --HHHHHHHHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHHHHHHHHHhcccccchhHHHhhcCC--cccchhcccCCCH
Confidence 2455566655443333333333444444443 433222 1111 234556655 6776655556777
Q ss_pred CCCccccccccHHHHHhhchh
Q 007512 418 APDDLDTRLLRAMITKGLIEP 438 (600)
Q Consensus 418 a~~~~~~~~~~~a~l~GlL~~ 438 (600)
. +|.+...++...+...|+.
T Consensus 224 ~-~~~~~~~s~~~~~~~~l~~ 243 (279)
T 2f1k_A 224 E-LGTMMATYNQRALLKSLQD 243 (279)
T ss_dssp H-HHHHHHHHSHHHHHHHHHH
T ss_pred H-HHHHHHHHhHHHHHHHHHH
Confidence 6 7888777776654433433
No 56
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=99.24 E-value=3e-10 Score=120.63 Aligned_cols=215 Identities=15% Similarity=0.147 Sum_probs=137.1
Q ss_pred CCHhHHHHhcccC-cEEEc------cCCCHhHHhh---hc---CCceEEEEcCCCCCCHHHHhccCCCceEEEEcCcccC
Q 007512 67 LGQAGLDLLNEFA-NVDCA------YNLSPEELCT---KI---SLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGID 133 (600)
Q Consensus 67 l~~~~~~~l~~~~-~v~~~------~~~~~~el~~---~i---~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~d 133 (600)
+.|+..+.|.+.+ +|.+. ..++.++..+ .+ -.+|.++- -.+.+.+.++.++++-.+++......|
T Consensus 40 ltP~~v~~L~~~G~~V~VE~gaG~~~~f~D~~Y~~aGa~i~~~~~adiIlk--Vk~p~~~e~~~l~~g~~l~~~lh~~~~ 117 (381)
T 3p2y_A 40 LVPKVVEKLSARGLEVVVESAAGAGALFSDADYERAGATIGDPWPADVVVK--VNPPTSDEISQLKPGSVLIGFLAPRTQ 117 (381)
T ss_dssp SCHHHHHHHHHTTCEEEECTTTTGGGTCCHHHHHHTTCEESCCTTSSEEEC--SSCCCHHHHTTSCTTCEEEECCCTTTC
T ss_pred CCHHHHHHHHhCCCEEEEeCCCCccCCCChHHHHHCCCEEeeeecCCEEEE--eCCCChhHHhhccCCCEEEEEeccccC
Confidence 5678888776654 55543 2355555533 11 12676652 123456667777667777776655544
Q ss_pred ccChhHHHhCCceeecCCCCC----h------HHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccc-eeccCCEEEE
Q 007512 134 NVDLAAATEFGCLVVNAPTAN----T------VAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVG-VSLVGKTLAV 202 (600)
Q Consensus 134 ~iD~~aa~~~GI~V~n~p~~~----~------~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g-~~l~gktiGI 202 (600)
.=-++++.++||...---... + .+++|.+= .+-+..+.. .-++.......+ ..+.+++|+|
T Consensus 118 ~~l~~~l~~~~it~ia~E~i~~~~~~~~l~~l~~~s~iAG------y~Av~~aa~--~l~~~~~~l~~~~~~v~~~kV~V 189 (381)
T 3p2y_A 118 PELASRLRIADVTAFAMESIPRISRAQTMDALSSQANVAG------YKAVLLGAS--LSTRFVPMLTTAAGTVKPASALV 189 (381)
T ss_dssp HHHHHHHHHTTCEEEEGGGCCSSGGGGGGCHHHHHHHHHH------HHHHHHHHH--HCSSCSSCEECSSCEECCCEEEE
T ss_pred HHHHHHHHHCCCeEEEeeccccccccccceeecchhHHHH------HHHHHHHHH--HhhhhhhhhhcccCCcCCCEEEE
Confidence 444688899999885422211 1 11222221 111111111 111111111111 2578999999
Q ss_pred EecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc--------------------------CHHHHhccCCEE
Q 007512 203 LGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV--------------------------SFDEAIATADFI 255 (600)
Q Consensus 203 IGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~--------------------------~l~ell~~aDvV 255 (600)
||+|.||..+|+.++++|++|++||++. ..+.+.+.|.++. ++++.+++||+|
T Consensus 190 iG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l~~aDIV 269 (381)
T 3p2y_A 190 LGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAITKFDIV 269 (381)
T ss_dssp ESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHHHTTCSEE
T ss_pred ECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHHHhcCCEE
Confidence 9999999999999999999999999987 4456667776432 367899999999
Q ss_pred EEec--CCCccccccccHhHhccCCCceEEEEcc--CCccc
Q 007512 256 SLHM--PLTPATSKVLNDETFGKMKKGVRIINVA--RGGVI 292 (600)
Q Consensus 256 ~l~~--Pl~~~t~~li~~~~l~~mk~gailvNva--rg~iv 292 (600)
+.++ |. ..+..+++++.++.||||++|||++ +|+.+
T Consensus 270 I~tv~iPg-~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~ 309 (381)
T 3p2y_A 270 ITTALVPG-RPAPRLVTAAAATGMQPGSVVVDLAGETGGNC 309 (381)
T ss_dssp EECCCCTT-SCCCCCBCHHHHHTSCTTCEEEETTGGGTCSB
T ss_pred EECCCCCC-cccceeecHHHHhcCCCCcEEEEEeCCCCCcc
Confidence 9886 53 3467789999999999999999998 55544
No 57
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.21 E-value=1.8e-11 Score=127.54 Aligned_cols=131 Identities=18% Similarity=0.176 Sum_probs=91.9
Q ss_pred HHHHHHcCcccccccc-----ceeccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCcc-cCHHHH
Q 007512 176 ADASVKAGKWQRNKYV-----GVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDL-VSFDEA 248 (600)
Q Consensus 176 ~~~~~~~g~W~~~~~~-----g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~-~~l~el 248 (600)
.++.++...|..+.+. ......++|||||+|.||..+|+.|...|++|.+||++. ..+...+.|+.. .+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~ 84 (320)
T 4dll_A 5 HHHSSGVDLGTENLYFQSMTVESDPYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAA 84 (320)
T ss_dssp ------------------------CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHH
T ss_pred ccccccccccccccceechhhccccCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHH
Confidence 3455666677654321 123456799999999999999999999999999999886 334445557765 489999
Q ss_pred hccCCEEEEecCCCccccccccH-hHhccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 249 IATADFISLHMPLTPATSKVLND-ETFGKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 249 l~~aDvV~l~~Pl~~~t~~li~~-~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
+++||+|++|+|....++.++.. ..+..+++|.++||++++.+.+.+.+.+.+.+..+
T Consensus 85 ~~~aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~ 143 (320)
T 4dll_A 85 ARDADIVVSMLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGI 143 (320)
T ss_dssp HTTCSEEEECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred HhcCCEEEEECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCC
Confidence 99999999999966666665542 45667899999999999998888888888877544
No 58
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.21 E-value=2.1e-11 Score=126.10 Aligned_cols=114 Identities=19% Similarity=0.270 Sum_probs=95.6
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc-CHHHHhccCCEEEEecCCCccccccccH--hH
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV-SFDEAIATADFISLHMPLTPATSKVLND--ET 273 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~~--~~ 273 (600)
|+|||||+|.||..+|++|...|++|.+||+.. ..+...+.|.... ++.|+++.||+|++|+|..+..+.++.. ..
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~ 83 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhh
Confidence 589999999999999999999999999999987 3455566787654 8999999999999999988877776633 36
Q ss_pred hccCCCceEEEEccCCccccHHHHHHhHhcCCceEEEEec
Q 007512 274 FGKMKKGVRIINVARGGVIDEEALVRALDSGRVAQAALDV 313 (600)
Q Consensus 274 l~~mk~gailvNvarg~ivde~aL~~aL~~g~i~ga~lDv 313 (600)
++.+++|.++||++....-+...+.+.+++..+ ..+|.
T Consensus 84 ~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~--~~lDa 121 (300)
T 3obb_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGL--AMLDA 121 (300)
T ss_dssp TTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTC--EEEEC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC--EEEec
Confidence 778999999999999999888999999988766 55663
No 59
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.19 E-value=1.8e-11 Score=126.81 Aligned_cols=114 Identities=18% Similarity=0.142 Sum_probs=93.7
Q ss_pred eeccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCcc-cCHHHHhccCCEEEEecCCCcccccccc
Q 007512 193 VSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDL-VSFDEAIATADFISLHMPLTPATSKVLN 270 (600)
Q Consensus 193 ~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~-~~l~ell~~aDvV~l~~Pl~~~t~~li~ 270 (600)
.++..++|||||+|.||+.+|++|...|++|.+||++. ..+.+.+.|+.. .++++++++||+|++|+|....++.++.
T Consensus 5 ~~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~ 84 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLG 84 (306)
T ss_dssp CCCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHT
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhc
Confidence 45667899999999999999999999999999999886 334455567765 4899999999999999997666777775
Q ss_pred HhHhccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 271 DETFGKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 271 ~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
.+.+..+++|.++||+++....+...+.+.+.+..+
T Consensus 85 ~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~ 120 (306)
T 3l6d_A 85 MPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGG 120 (306)
T ss_dssp STTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTC
T ss_pred ccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 334566789999999999998888888888876544
No 60
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.18 E-value=6.6e-11 Score=123.24 Aligned_cols=137 Identities=18% Similarity=0.152 Sum_probs=95.0
Q ss_pred HHHHHHcCccccccccceeccCCEEEEEecChhHHHHHHHhhcCC-CEEEEECCCCC--------hhHHHHcCCccc-CH
Q 007512 176 ADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLG-MHVIAHDPYAP--------ADRARAIGVDLV-SF 245 (600)
Q Consensus 176 ~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~IG~~vA~~l~~~g-~~V~~~d~~~~--------~~~a~~~g~~~~-~l 245 (600)
++.+.+-+.|.++.++.. ..++|||||+|.||..+|+.|...| ++|++||++.. .+...+.|+ .. ++
T Consensus 5 ~~~~~~~~~~~~~~~~~~--M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-~~~s~ 81 (317)
T 4ezb_A 5 HHHSSGVDLGTENLYFQS--MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-EPLDD 81 (317)
T ss_dssp ----------CCCHHHHT--SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-EEESS
T ss_pred cccccccccCcccCcccc--cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-CCCCH
Confidence 444455566777644221 2478999999999999999999999 99999998751 123345577 66 88
Q ss_pred HHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCceEEEEeccCCC
Q 007512 246 DEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRVAQAALDVFTEE 317 (600)
Q Consensus 246 ~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i~ga~lDv~~~E 317 (600)
.+++++||+|++|+|....... + ......++++.++||+++........+.+.+++..+....--|++.+
T Consensus 82 ~e~~~~aDvVi~avp~~~~~~~-~-~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~ 151 (317)
T 4ezb_A 82 VAGIACADVVLSLVVGAATKAV-A-ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARV 151 (317)
T ss_dssp GGGGGGCSEEEECCCGGGHHHH-H-HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCS
T ss_pred HHHHhcCCEEEEecCCHHHHHH-H-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCc
Confidence 9999999999999996554433 3 55667799999999999988888888888887754422222356643
No 61
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.17 E-value=4.4e-11 Score=124.02 Aligned_cols=115 Identities=14% Similarity=0.130 Sum_probs=92.6
Q ss_pred ceeccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc-CHHHHhccCCEEEEecCCCccccccc
Q 007512 192 GVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV-SFDEAIATADFISLHMPLTPATSKVL 269 (600)
Q Consensus 192 g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li 269 (600)
.....-++|||||+|.||..+|+.|...|++|.+||++. ..+...+.|+... ++++++++||+|++|+|....++.++
T Consensus 16 ~~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~ 95 (310)
T 3doj_A 16 PRGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVV 95 (310)
T ss_dssp --CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred cccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHH
Confidence 345566899999999999999999999999999999987 3455566787654 89999999999999999665666655
Q ss_pred --cHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 270 --NDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 270 --~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
.+..+..+++|.++||+++......+.+.+.+.+..+
T Consensus 96 ~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~ 134 (310)
T 3doj_A 96 FDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGG 134 (310)
T ss_dssp HSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred hCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 2445667999999999999888777888777776543
No 62
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=99.16 E-value=1.6e-10 Score=121.90 Aligned_cols=108 Identities=25% Similarity=0.363 Sum_probs=92.5
Q ss_pred ce-eccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHHcCCcccCHHHHhc-cCCEEEEecCCCcccccc
Q 007512 192 GV-SLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARAIGVDLVSFDEAIA-TADFISLHMPLTPATSKV 268 (600)
Q Consensus 192 g~-~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~~g~~~~~l~ell~-~aDvV~l~~Pl~~~t~~l 268 (600)
|. ++.|||++|+|+|+||+.+|++++.+|++|+++|++.. .+.+.+.|.+.++.++++. +||+++-| .+.++
T Consensus 169 G~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~DIliP~-----A~~~~ 243 (355)
T 1c1d_A 169 GLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPC-----AMGGV 243 (355)
T ss_dssp TCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEEC-----SCSCC
T ss_pred CCCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeChHHhhcCccceecHh-----HHHhh
Confidence 55 79999999999999999999999999999999998753 3345567877888899988 99999853 47889
Q ss_pred ccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 269 LNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 269 i~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
|+.+.++.|| ..+|+|.+++++.++++ .++|+++.|
T Consensus 244 I~~~~~~~lk-~~iVie~AN~p~t~~eA-~~~L~~~gI 279 (355)
T 1c1d_A 244 ITTEVARTLD-CSVVAGAANNVIADEAA-SDILHARGI 279 (355)
T ss_dssp BCHHHHHHCC-CSEECCSCTTCBCSHHH-HHHHHHTTC
T ss_pred cCHHHHhhCC-CCEEEECCCCCCCCHHH-HHHHHhCCE
Confidence 9999999998 68999999999998777 477888766
No 63
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.16 E-value=3.1e-11 Score=124.71 Aligned_cols=113 Identities=16% Similarity=0.204 Sum_probs=91.6
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc-CHHHHhccCCEEEEecCCCccccccccHhHhc
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV-SFDEAIATADFISLHMPLTPATSKVLNDETFG 275 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~ 275 (600)
++|||||+|.||..+|++|...|++|++||+.. ..+...+.|.... ++.|+++.||+|++|+|..+..+..+....+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~ 85 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVE 85 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHh
Confidence 589999999999999999999999999999877 3344556677654 89999999999999999777777777777888
Q ss_pred cCCCceEEEEccCCccccHHHHHHhHhcCCceEEEEe
Q 007512 276 KMKKGVRIINVARGGVIDEEALVRALDSGRVAQAALD 312 (600)
Q Consensus 276 ~mk~gailvNvarg~ivde~aL~~aL~~g~i~ga~lD 312 (600)
.++++.++||++....-....+.+.+.+..+ ..+|
T Consensus 86 ~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~--~~ld 120 (297)
T 4gbj_A 86 KLGKDGVHVSMSTISPETSRQLAQVHEWYGA--HYVG 120 (297)
T ss_dssp HHCTTCEEEECSCCCHHHHHHHHHHHHHTTC--EEEE
T ss_pred hcCCCeEEEECCCCChHHHHHHHHHHHhcCC--ceec
Confidence 8999999999999888888888888887655 4444
No 64
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.15 E-value=3.6e-10 Score=115.58 Aligned_cols=130 Identities=18% Similarity=0.112 Sum_probs=94.0
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHHc-----------C--------------Cc-ccCHHHHhc
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARAI-----------G--------------VD-LVSFDEAIA 250 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~~-----------g--------------~~-~~~l~ell~ 250 (600)
++|+|||+|.||+.+|+.+...|++|++||++.. .+.+.+. | +. ..+++++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVK 84 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhc
Confidence 6899999999999999999999999999998762 2322221 1 22 247888999
Q ss_pred cCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCc
Q 007512 251 TADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQHER 330 (600)
Q Consensus 251 ~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~n 330 (600)
+||+|+.|+|.+.+.+..+-++....+++++++++.+++- ...++.+++... -...+++.|. |.+..+.
T Consensus 85 ~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~--~~~~la~~~~~~-~~~ig~h~~~--------p~~~~~l 153 (283)
T 4e12_A 85 DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTL--LPSDLVGYTGRG-DKFLALHFAN--------HVWVNNT 153 (283)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS--CHHHHHHHHSCG-GGEEEEEECS--------STTTSCE
T ss_pred cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCC--CHHHHHhhcCCC-cceEEEccCC--------CcccCce
Confidence 9999999999876666656566677799999999665553 455666666442 1235666553 3345677
Q ss_pred EEEcCCCC
Q 007512 331 VTVTPHLG 338 (600)
Q Consensus 331 vilTPH~~ 338 (600)
+.++||..
T Consensus 154 vevv~~~~ 161 (283)
T 4e12_A 154 AEVMGTTK 161 (283)
T ss_dssp EEEEECTT
T ss_pred EEEEeCCC
Confidence 88999853
No 65
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.13 E-value=1.2e-10 Score=120.96 Aligned_cols=139 Identities=17% Similarity=0.134 Sum_probs=91.2
Q ss_pred HHHHHcCccccccc--cceeccCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCC---ChhHHHHcCCccc-CHHHHh
Q 007512 177 DASVKAGKWQRNKY--VGVSLVGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYA---PADRARAIGVDLV-SFDEAI 249 (600)
Q Consensus 177 ~~~~~~g~W~~~~~--~g~~l~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~---~~~~a~~~g~~~~-~l~ell 249 (600)
+++++.+.|.++.. .......++|||||+|.||..+|+.|...|+ +|.+||++. ..+.+.+.|+... ++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~ 81 (312)
T 3qsg_A 2 HHHHHHSSGVDLGTENLYFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVA 81 (312)
T ss_dssp -----------------------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHH
T ss_pred CcccccccccccCcccccccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHH
Confidence 34567777875421 1223446799999999999999999998899 999999962 3344566787654 899999
Q ss_pred ccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCceEEEEe--ccCCC
Q 007512 250 ATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRVAQAALD--VFTEE 317 (600)
Q Consensus 250 ~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i~ga~lD--v~~~E 317 (600)
++||+|++|+|...... .+ ......++++.+|||+++.......++.+.+.+..++...+| |++.+
T Consensus 82 ~~aDvVi~~vp~~~~~~-~~-~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~pv~g~~ 149 (312)
T 3qsg_A 82 GECDVIFSLVTAQAALE-VA-QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAVMSAV 149 (312)
T ss_dssp HHCSEEEECSCTTTHHH-HH-HHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEEEECSCS
T ss_pred hcCCEEEEecCchhHHH-HH-HhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEeccccCCc
Confidence 99999999999665433 33 456677999999999999888778888777766422223344 56644
No 66
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=99.12 E-value=7.3e-10 Score=118.52 Aligned_cols=214 Identities=17% Similarity=0.204 Sum_probs=133.7
Q ss_pred CCHhHHHHhcccC-cEEEc------cCCCHhHHhh---------hcCCceEEEE-cCCCCCCHHHHhccCCCceEEEEcC
Q 007512 67 LGQAGLDLLNEFA-NVDCA------YNLSPEELCT---------KISLCDALIV-RSGTKVNRDVFESSAGRLKVVGRAG 129 (600)
Q Consensus 67 l~~~~~~~l~~~~-~v~~~------~~~~~~el~~---------~i~~~d~li~-~~~~~~~~~~l~~~~~~Lk~I~~~g 129 (600)
+.|+..+.|.+.+ +|.+. ..++.++..+ .+.++|.++- .. .+.+-++.++++-.+++...
T Consensus 43 ltP~~v~~L~~~G~~V~VE~gaG~~~~f~D~~Y~~aGa~i~~~~~~~~adiIlkVk~---p~~~e~~~l~~g~~l~~~lh 119 (405)
T 4dio_A 43 GSVESVKKLKSLGFDVVVEAGAGLGSRIPDQEYEKAGARVGTAADAKTADVILKVRR---PSAQEISGYRSGAVVIAIMD 119 (405)
T ss_dssp CCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEECGGGGGGCSEEEEEEC---CCTTTGGGSCTTCEEEEECC
T ss_pred CCHHHHHHHHhCCCEEEEeCCCCccCCCCHHHHHHcCCEEchHHhhccCCEEEEeCC---CChhHHhhcCCCcEEEEEec
Confidence 5677777776554 55442 2344444422 1345787663 32 23344555656677777655
Q ss_pred cccCccChhHHHhCCceeecCCCCC------h----HHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccc-eeccCC
Q 007512 130 VGIDNVDLAAATEFGCLVVNAPTAN------T----VAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVG-VSLVGK 198 (600)
Q Consensus 130 ~G~d~iD~~aa~~~GI~V~n~p~~~------~----~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g-~~l~gk 198 (600)
..-|.=-++++.++||...---... . .+++|.+= .+-+..+... -++.......+ ..+.+.
T Consensus 120 ~~~~~~l~~~l~~~~it~ia~E~i~r~~ra~~l~~ls~~s~iAG------y~Av~~aa~~--l~~~~~~l~t~~g~v~~~ 191 (405)
T 4dio_A 120 PYGNEEAISAMAGAGLTTFAMELMPRITRAQSMDVLSSQANLAG------YQAVIDAAYE--YDRALPMMMTAAGTVPAA 191 (405)
T ss_dssp CTTCHHHHHHHHHTTCEEEEGGGSCCSGGGGGGCHHHHHHHHHH------HHHHHHHHHH--CSSCSSCEEETTEEECCC
T ss_pred cccCHHHHHHHHHCCCeEEEeeccccccccCccceecchhHHHH------HHHHHHHHHH--hHhhhchhhccCCCcCCC
Confidence 5444444688899999885322111 1 11222221 1111111111 11111111111 257899
Q ss_pred EEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHHcCCccc------------------------------CHHH
Q 007512 199 TLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARAIGVDLV------------------------------SFDE 247 (600)
Q Consensus 199 tiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~~g~~~~------------------------------~l~e 247 (600)
+|+|+|+|.||..+|+.++++|++|++||++.. .+.+.+.|..++ ++++
T Consensus 192 kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l~e 271 (405)
T 4dio_A 192 KIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALVAE 271 (405)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHHHHH
T ss_pred EEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhHHHH
Confidence 999999999999999999999999999999884 355666665421 4678
Q ss_pred HhccCCEEEEec--CCCccccccccHhHhccCCCceEEEEcc--CCccc
Q 007512 248 AIATADFISLHM--PLTPATSKVLNDETFGKMKKGVRIINVA--RGGVI 292 (600)
Q Consensus 248 ll~~aDvV~l~~--Pl~~~t~~li~~~~l~~mk~gailvNva--rg~iv 292 (600)
++++||+|+.++ |.. ....+++++.++.||||++|||++ +|+.+
T Consensus 272 ~l~~aDVVI~tvlipg~-~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~ 319 (405)
T 4dio_A 272 HIAKQDIVITTALIPGR-PAPRLVTREMLDSMKPGSVVVDLAVERGGNI 319 (405)
T ss_dssp HHHTCSEEEECCCCSSS-CCCCCBCHHHHTTSCTTCEEEETTGGGTCSB
T ss_pred HhcCCCEEEECCcCCCC-CCCEEecHHHHhcCCCCCEEEEEeCCCCCCc
Confidence 899999999875 532 467889999999999999999998 66654
No 67
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.12 E-value=9.8e-11 Score=120.58 Aligned_cols=108 Identities=22% Similarity=0.242 Sum_probs=91.1
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc-CHHHHhccCCEEEEecCCCccccccccHhHh
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV-SFDEAIATADFISLHMPLTPATSKVLNDETF 274 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l 274 (600)
.++|||||+|.||..+|+.|...|++|.+||++. ..+...+.|+... +++++++ ||+|++|+|....++.++ +..+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~-~~l~ 92 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV-GELA 92 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH-HHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH-HHHH
Confidence 3689999999999999999999999999999987 4456667787654 8999999 999999999666666666 5667
Q ss_pred ccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 275 GKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 275 ~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
..++++.++||+++......+.+.+.+.+..+
T Consensus 93 ~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~ 124 (296)
T 3qha_A 93 GHAKPGTVIAIHSTISDTTAVELARDLKARDI 124 (296)
T ss_dssp TTCCTTCEEEECSCCCHHHHHHHHHHHGGGTC
T ss_pred HhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCC
Confidence 78999999999999988888888888876544
No 68
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.12 E-value=1.7e-11 Score=128.84 Aligned_cols=136 Identities=21% Similarity=0.263 Sum_probs=99.1
Q ss_pred eeccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC--hhHHHHcCCcccCHHHHhccCCEEEEecCCCcccccccc
Q 007512 193 VSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP--ADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLN 270 (600)
Q Consensus 193 ~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~--~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~ 270 (600)
..+.+++|||||+|.||+++|+.|+..|++|++||++.. .+.+.+.|+...++++++++||+|++|+|... ...++.
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~~~~e~~~~aDvVilavp~~~-~~~v~~ 90 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDEF-QGRLYK 90 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCHHH-HHHHHH
T ss_pred chhcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEccHHHHHhcCCEEEEeCCcHH-HHHHHH
Confidence 468899999999999999999999999999999998864 35566778876689999999999999999543 455555
Q ss_pred HhHhccCCCceEEEEccCCccccHHHHHHhHhcCCceEEEEeccCCCCCCCC---Ccccc---CCcEEEcCCCC
Q 007512 271 DETFGKMKKGVRIINVARGGVIDEEALVRALDSGRVAQAALDVFTEEPPPAD---SKLVQ---HERVTVTPHLG 338 (600)
Q Consensus 271 ~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~---~~L~~---~~nvilTPH~~ 338 (600)
++....|++|++|++++ + +.. ....+. .+.+.|++...|..+. ..|++ ..++++|||..
T Consensus 91 ~~i~~~l~~~~ivi~~~--g-v~~--~~~~~~----~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~ii~~~~~ 155 (338)
T 1np3_A 91 EEIEPNLKKGATLAFAH--G-FSI--HYNQVV----PRADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQD 155 (338)
T ss_dssp HHTGGGCCTTCEEEESC--C-HHH--HTTSSC----CCTTCEEEEEEESSCSHHHHHHHHTTCCCCEEEEEEEC
T ss_pred HHHHhhCCCCCEEEEcC--C-chh--HHHhhc----CCCCcEEEeccCCCCchhHHHHHhccCCCeEEEEecCC
Confidence 35556799999999984 2 232 222221 1223455555553333 24666 78899999864
No 69
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.11 E-value=1.7e-10 Score=122.22 Aligned_cols=121 Identities=13% Similarity=0.201 Sum_probs=97.5
Q ss_pred ccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc-CHHHHhccC---CEEEEecCCCccccccc
Q 007512 195 LVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV-SFDEAIATA---DFISLHMPLTPATSKVL 269 (600)
Q Consensus 195 l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~-~l~ell~~a---DvV~l~~Pl~~~t~~li 269 (600)
+.+++|||||+|.||+.+|+.|...|++|.+||++. ..+.+.+.|+... ++++++++| |+|++|+|.. .+..++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl 98 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML 98 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH
Confidence 457899999999999999999999999999999886 3344555677654 899999999 9999999966 666666
Q ss_pred cHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCceEEEEeccCCC
Q 007512 270 NDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRVAQAALDVFTEE 317 (600)
Q Consensus 270 ~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i~ga~lDv~~~E 317 (600)
...+..+++|.+|||++++...+...+.+.+.+..+......|++.+
T Consensus 99 -~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~ 145 (358)
T 4e21_A 99 -QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGI 145 (358)
T ss_dssp -HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGG
T ss_pred -HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCH
Confidence 45677799999999999999888888888888876644444566554
No 70
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=99.11 E-value=2.8e-10 Score=124.14 Aligned_cols=152 Identities=20% Similarity=0.261 Sum_probs=111.5
Q ss_pred CceEEE-EcCcccCccC-hhHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCC
Q 007512 121 RLKVVG-RAGVGIDNVD-LAAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGK 198 (600)
Q Consensus 121 ~Lk~I~-~~g~G~d~iD-~~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gk 198 (600)
+++-+. -.++|+..+. +.+..+..|+|+|+.+..+....+...+.-- ++..+-|. ..+..+.||
T Consensus 201 ~i~G~~EeTttGv~rL~~~~~~g~L~iPvinvnDs~tK~~fDn~yGt~~-----------sl~dgi~r---~tg~~L~GK 266 (488)
T 3ond_A 201 RVVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRH-----------SLPDGLMR---ATDVMIAGK 266 (488)
T ss_dssp HCCEEEECSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHHHHHHHH-----------HHHHHHHH---HHCCCCTTC
T ss_pred hcceeEecccccHHHHHHHHHcCCCCCceecccchhhhhHhhhhccccH-----------HHHHHHHH---HcCCcccCC
Confidence 344443 3577887653 2333457799999987666553332222111 11112121 245679999
Q ss_pred EEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccC
Q 007512 199 TLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKM 277 (600)
Q Consensus 199 tiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~m 277 (600)
+++|+|+|.||+.+|++|+++|++|+++|++. ....+...|+...++++++..+|+|+.+.. +.++++.+.+..|
T Consensus 267 tVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~atG----~~~vl~~e~l~~m 342 (488)
T 3ond_A 267 VAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTTG----NKDIIMLDHMKKM 342 (488)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECSS----CSCSBCHHHHTTS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCCC----ChhhhhHHHHHhc
Confidence 99999999999999999999999999999876 344566778877889999999999998653 5678899899999
Q ss_pred CCceEEEEccCCc
Q 007512 278 KKGVRIINVARGG 290 (600)
Q Consensus 278 k~gailvNvarg~ 290 (600)
|++++|+|+|++.
T Consensus 343 k~gaiVvNaG~~~ 355 (488)
T 3ond_A 343 KNNAIVCNIGHFD 355 (488)
T ss_dssp CTTEEEEESSSTT
T ss_pred CCCeEEEEcCCCC
Confidence 9999999999974
No 71
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.10 E-value=4.7e-11 Score=120.81 Aligned_cols=176 Identities=16% Similarity=0.148 Sum_probs=123.2
Q ss_pred CCCHhHHhhhcCC----ceEEEEcCCCCCCHHHHhccCCCceEEEEcCcccCccChhHHHhCCceeecCCCCChHHHHHH
Q 007512 86 NLSPEELCTKISL----CDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLVVNAPTANTVAAAEH 161 (600)
Q Consensus 86 ~~~~~el~~~i~~----~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~d~iD~~aa~~~GI~V~n~p~~~~~~vAE~ 161 (600)
..+++++.+.+.+ ++++.+. .|+.++++..+ +.|.-+++...|+|.++. +.| +..|+|+..
T Consensus 37 ~~~~~~l~~~i~~l~~~~~G~~vt--~P~k~~i~~~~-~~l~~~a~~~gavn~i~~----~~g----~~~g~ntd~---- 101 (263)
T 2d5c_A 37 DTPLEALPGRLKEVRRAFRGVNLT--LPLKEAALAHL-DWVSPEAQRIGAVNTVLQ----VEG----RLFGFNTDA---- 101 (263)
T ss_dssp ECCGGGHHHHHHHHHHHCSEEEEC--TTCTTGGGGGC-SEECHHHHHHTCCCEEEE----ETT----EEEEECCHH----
T ss_pred eCCHHHHHHHHHhccccCceEEEc--ccCHHHHHHHH-HHHhHHHHHhCCCCcEEc----cCC----eEEEeCCCH----
Confidence 4466666665543 4555553 46778888887 588888999999999976 344 234566654
Q ss_pred HHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCCh--hHHHHcC
Q 007512 162 GIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPA--DRARAIG 239 (600)
Q Consensus 162 ~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~--~~a~~~g 239 (600)
.+++.++.| .+.++.| +++|||+|.+|+.+|+.|...|++|.+||++... ..+...|
T Consensus 102 -~g~~~~l~~-------------------~~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~ 160 (263)
T 2d5c_A 102 -PGFLEALKA-------------------GGIPLKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFG 160 (263)
T ss_dssp -HHHHHHHHH-------------------TTCCCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHT
T ss_pred -HHHHHHHHH-------------------hCCCCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence 244444433 1347889 9999999999999999999999999999987522 2233445
Q ss_pred CcccCHHHHhccCCEEEEecCCCc--cccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhc
Q 007512 240 VDLVSFDEAIATADFISLHMPLTP--ATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDS 303 (600)
Q Consensus 240 ~~~~~l~ell~~aDvV~l~~Pl~~--~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~ 303 (600)
....+++++ +++|+|++|+|... .+...+. ...+++|.+++|++.+.. +. .+.++.++
T Consensus 161 ~~~~~~~~~-~~~Divi~~tp~~~~~~~~~~l~---~~~l~~g~~viD~~~~p~-~t-~l~~~a~~ 220 (263)
T 2d5c_A 161 LRAVPLEKA-REARLLVNATRVGLEDPSASPLP---AELFPEEGAAVDLVYRPL-WT-RFLREAKA 220 (263)
T ss_dssp CEECCGGGG-GGCSEEEECSSTTTTCTTCCSSC---GGGSCSSSEEEESCCSSS-SC-HHHHHHHH
T ss_pred cchhhHhhc-cCCCEEEEccCCCCCCCCCCCCC---HHHcCCCCEEEEeecCCc-cc-HHHHHHHH
Confidence 555578888 99999999999762 2323443 456899999999998743 32 35555544
No 72
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.09 E-value=1.3e-10 Score=118.85 Aligned_cols=109 Identities=14% Similarity=0.176 Sum_probs=90.1
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc-CHHHHhccCCEEEEecCCCcccccccc--HhH
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV-SFDEAIATADFISLHMPLTPATSKVLN--DET 273 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~--~~~ 273 (600)
++|||||+|.||+.+|+.|...|++|.+||++. ..+...+.|+... ++++++++||+|++|+|....++.++. +..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 689999999999999999999999999999987 4455666677654 899999999999999996556666652 445
Q ss_pred hccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 274 FGKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 274 l~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
+..+++|.++||+++....+...+.+.+++..+
T Consensus 82 ~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~ 114 (287)
T 3pef_A 82 LEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGG 114 (287)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred hhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 667899999999999888778888877776544
No 73
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.07 E-value=1.7e-10 Score=119.06 Aligned_cols=111 Identities=19% Similarity=0.191 Sum_probs=89.7
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCcc--cCHHHHhccCCEEEEecCCCcccccccc--
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDL--VSFDEAIATADFISLHMPLTPATSKVLN-- 270 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~--~~l~ell~~aDvV~l~~Pl~~~t~~li~-- 270 (600)
..++|||||+|.||..+|+.|...|++|.+||++. ..+...+.|... .++++++++||+|++|+|.....+.++.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~ 85 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGE 85 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhCh
Confidence 34689999999999999999999999999999886 334555667754 4889999999999999996555666542
Q ss_pred HhHhccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 271 DETFGKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 271 ~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
+..+..+++|.++||+++........+.+.+.+..+
T Consensus 86 ~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~ 121 (303)
T 3g0o_A 86 DGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNL 121 (303)
T ss_dssp CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTC
T ss_pred hhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCC
Confidence 445567899999999999888778888887777544
No 74
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.05 E-value=2e-10 Score=117.39 Aligned_cols=109 Identities=18% Similarity=0.176 Sum_probs=89.4
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc-CHHHHhccCCEEEEecCCCcccccccc--HhH
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV-SFDEAIATADFISLHMPLTPATSKVLN--DET 273 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~--~~~ 273 (600)
++|||||+|.||..+|+.|...|++|.+||++. ..+...+.|+... ++++++++||+|++|+|..+.++.++. +..
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l 81 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGV 81 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhh
Confidence 479999999999999999999999999999987 3455556677654 899999999999999996656666552 345
Q ss_pred hccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 274 FGKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 274 l~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
+..+++|.++||++++.....+.+.+.+.+..+
T Consensus 82 ~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~ 114 (287)
T 3pdu_A 82 LEGIGGGRGYIDMSTVDDETSTAIGAAVTARGG 114 (287)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred hhcccCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 667899999999999988778888777776533
No 75
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.02 E-value=3.7e-10 Score=116.11 Aligned_cols=107 Identities=18% Similarity=0.246 Sum_probs=88.5
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCcc-cCHHHHhccCCEEEEecCCCccccccccH--hH
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDL-VSFDEAIATADFISLHMPLTPATSKVLND--ET 273 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~-~~l~ell~~aDvV~l~~Pl~~~t~~li~~--~~ 273 (600)
++|||||+|.||+.+|+.|...|++|.+||++. ..+...+.|+.. .++++++++||+|++|+|....++.++.. ..
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~ 83 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCG
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhH
Confidence 689999999999999999999999999999886 344555667765 48999999999999999966666666541 45
Q ss_pred hccCCCceEEEEccCCccccHHHHHHhHhcC
Q 007512 274 FGKMKKGVRIINVARGGVIDEEALVRALDSG 304 (600)
Q Consensus 274 l~~mk~gailvNvarg~ivde~aL~~aL~~g 304 (600)
+..++++.++||++++.....+.+.+.+.+.
T Consensus 84 ~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~ 114 (302)
T 2h78_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARER 114 (302)
T ss_dssp GGSSCSSCEEEECSCCCHHHHHHHHHHHHHT
T ss_pred HhcCCCCcEEEECCCCCHHHHHHHHHHHHHc
Confidence 6679999999999998887777888877764
No 76
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.98 E-value=3.3e-10 Score=115.59 Aligned_cols=165 Identities=17% Similarity=0.196 Sum_probs=116.0
Q ss_pred CCCHhHHhhhc-----CCceEEEEcCCCCCCHHHHhccCCCceEEEEcCcccCccChhHHHhCCceeecCCCCChHHHHH
Q 007512 86 NLSPEELCTKI-----SLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLVVNAPTANTVAAAE 160 (600)
Q Consensus 86 ~~~~~el~~~i-----~~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~d~iD~~aa~~~GI~V~n~p~~~~~~vAE 160 (600)
..+++++.+.+ .+++++.+. .|..++++..+ +.+.-.++...++|.++. +.|-. .|+|+...
T Consensus 48 ~~~~~~l~~~i~~l~~~~~~G~nvt--iP~k~~i~~~l-d~l~~~A~~~gavnti~~----~~g~~----~g~nTd~~-- 114 (275)
T 2hk9_A 48 EINPEELKKAFEGFKALKVKGINVT--VPFKEEIIPLL-DYVEDTAKEIGAVNTVKF----ENGKA----YGYNTDWI-- 114 (275)
T ss_dssp ECCGGGHHHHHHHHHHHTCCEEEEC--TTSTTTTGGGC-SEECHHHHHHTCCCEEEE----ETTEE----EEECCHHH--
T ss_pred ECCHHHHHHHHHHHHhCCCCEEEEC--ccCHHHHHHHH-HHhhHHHHHhCCcceEEe----eCCEE----EeecCCHH--
Confidence 45566665544 257888885 46777788877 478778888888888865 34522 35666443
Q ss_pred HHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCCh-h-HHHHc
Q 007512 161 HGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPA-D-RARAI 238 (600)
Q Consensus 161 ~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~-~-~a~~~ 238 (600)
+++.++.| .+.++.|++++|||.|.+|+.+|+.|...|++|.+||++... + .+...
T Consensus 115 ---G~~~~l~~-------------------~~~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~ 172 (275)
T 2hk9_A 115 ---GFLKSLKS-------------------LIPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF 172 (275)
T ss_dssp ---HHHHHHHH-------------------HCTTGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS
T ss_pred ---HHHHHHHH-------------------hCCCcCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc
Confidence 44444432 134678999999999999999999999889999999987522 1 12233
Q ss_pred CCccc-CHHHHhccCCEEEEecCCCc--cccccccHhHhccCCCceEEEEccC
Q 007512 239 GVDLV-SFDEAIATADFISLHMPLTP--ATSKVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 239 g~~~~-~l~ell~~aDvV~l~~Pl~~--~t~~li~~~~l~~mk~gailvNvar 288 (600)
|+... ++++++++||+|++|+|... ++...++ +..++++.+++|++.
T Consensus 173 g~~~~~~~~~~~~~aDiVi~atp~~~~~~~~~~i~---~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 173 PLEVVNSPEEVIDKVQVIVNTTSVGLKDEDPEIFN---YDLIKKDHVVVDIIY 222 (275)
T ss_dssp CEEECSCGGGTGGGCSEEEECSSTTSSTTCCCSSC---GGGCCTTSEEEESSS
T ss_pred CCeeehhHHhhhcCCCEEEEeCCCCCCCCCCCCCC---HHHcCCCCEEEEcCC
Confidence 44443 78889999999999999764 2223343 455899999999988
No 77
>2iaf_A Hypothetical protein SDHL; MCSG, PSI2, MAD, structural genomics, L-serine dehydratase, structure initiative; 2.05A {Legionella pneumophila} SCOP: d.81.2.1 PDB: 2iqq_A
Probab=98.94 E-value=5.7e-10 Score=103.32 Aligned_cols=113 Identities=13% Similarity=0.001 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHhcCC---CCceEEEEEEeecCCCCccccccccHHHHHhhchhhhccchh----------hccH--H
Q 007512 386 VELAEKLGRLAVQLVAGG---SGVKTVKVSYASSRAPDDLDTRLLRAMITKGLIEPISDVFVN----------LVNA--D 450 (600)
Q Consensus 386 ~~la~~lG~l~~qL~~g~---~~~k~v~i~~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vn----------~vnA--~ 450 (600)
-.=+.|+|+++++++... ..++++++.++|||+ .|+++|++|+|++.||++ +.+++++ +.++ +
T Consensus 10 T~Gpmraa~~f~~~l~~~~~l~~~~~v~v~LyGSla-~TgkGHgTD~Aii~GL~G-~~pd~~~~~~~~~~~~~i~~~~~l 87 (151)
T 2iaf_A 10 TVGPMLAANAFLQLLEQKNLFDKTQRVKVELYGSLA-LTGKGHGTDKAILNGLEN-KAPETVDPASMIPRMHEILDSNLL 87 (151)
T ss_dssp SHHHHHHHHHHHHHHHHTTCTTTCCEEEEEEEHHHH-HTCTTSSHHHHHHHHTTT-CCCC-----CHHHHHHHHHHHTEE
T ss_pred HHHHHHHHHHHHHHHhhccccCCCcEEEEEEEchHH-hhCCCccccHHHHhhhcC-CCCCccChhhhHHHHHHHHhcCcc
Confidence 344568898888888521 158999999999999 999999999999999994 4555565 4444 3
Q ss_pred HHHhhcCceEE------EEEeecCCCCCCCCceEEEEEeecccccccccCCCcE-EEEEE-EEeCCceEE
Q 007512 451 YTAKQRGLRLT------EERILLDGSPESPLEFIQVQIANVESKFASAISESGE-IKVEG-RVKDGVPHL 512 (600)
Q Consensus 451 ~~A~e~GI~v~------~~~~~~~~~~~~~~n~i~v~~~~~~~~~~~~~~~~~~-~~v~G-sv~gG~~~I 512 (600)
.+|.+++|.+. |.....- ..|||++++++.+ .++.. .++++ ||+||.++.
T Consensus 88 ~la~~~~i~f~~~~di~f~~~~~l---p~HpN~m~~~a~~---------~~g~~l~~~~~ySIGGGfI~~ 145 (151)
T 2iaf_A 88 NLAGKKEIPFHEATDFLFLQKELL---PKHSNGMRFSAFD---------GNANLLIEQVYYSIGGGFITT 145 (151)
T ss_dssp EETTTEEEECCHHHHEEEETTCCC---SSCSSEEEEEEEC---------TTSCEEEEEEEEECSSSCEEE
T ss_pred ccCCcceeEEccccceeEcCCCCC---CCCCCeeEEEEEe---------CCCCEEEEEEEEEeCCceEEE
Confidence 46777777664 3222111 1699999999984 34444 48999 788887653
No 78
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=98.90 E-value=8.4e-09 Score=107.53 Aligned_cols=130 Identities=17% Similarity=0.106 Sum_probs=88.3
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHH-----------HcC--------------Cc-ccCHHHHh
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRAR-----------AIG--------------VD-LVSFDEAI 249 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~-----------~~g--------------~~-~~~l~ell 249 (600)
-++|||||+|.||.++|..+...|++|.+||++.. .+.+. +.| +. ..++++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav 85 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHH
Confidence 36899999999999999999999999999999862 22221 123 12 23788999
Q ss_pred ccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccCC
Q 007512 250 ATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQHE 329 (600)
Q Consensus 250 ~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~ 329 (600)
++||+|+.|+|...+.+.-+-.+....++++++|++++++- ....+.+.+... ....+.+-+. |+. . .+
T Consensus 86 ~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i--~~~~la~~~~~~-~r~ig~Hp~~--P~~-~-----~~ 154 (319)
T 2dpo_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCL--LPSKLFTGLAHV-KQCIVAHPVN--PPY-Y-----IP 154 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSC--CHHHHHTTCTTG-GGEEEEEECS--STT-T-----CC
T ss_pred hcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCCh--HHHHHHHhcCCC-CCeEEeecCC--chh-h-----cc
Confidence 99999999999766555444355666789999998776653 345665555432 2224555444 321 2 23
Q ss_pred cEEEcCCC
Q 007512 330 RVTVTPHL 337 (600)
Q Consensus 330 nvilTPH~ 337 (600)
-+.++|+.
T Consensus 155 lveiv~g~ 162 (319)
T 2dpo_A 155 LVELVPHP 162 (319)
T ss_dssp EEEEEECT
T ss_pred eEEEeCCC
Confidence 45677764
No 79
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=98.89 E-value=5.5e-09 Score=107.59 Aligned_cols=126 Identities=15% Similarity=0.185 Sum_probs=86.0
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHc-------CCcc-cCHHHHhccCCEEEEecCCCcccc
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAI-------GVDL-VSFDEAIATADFISLHMPLTPATS 266 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~-------g~~~-~~l~ell~~aDvV~l~~Pl~~~t~ 266 (600)
+-|+|||||+|.||+++|..+. .|++|++||++. ..+.+.+. ++.. .++++ +++||+|+.|+|...+.+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~vk 88 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNTK 88 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHHH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHHH
Confidence 4689999999999999999999 999999999986 33444444 4433 36766 899999999999887766
Q ss_pred ccccHhHhccCCCceEE-EEccCCccccHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEEcCCC
Q 007512 267 KVLNDETFGKMKKGVRI-INVARGGVIDEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTVTPHL 337 (600)
Q Consensus 267 ~li~~~~l~~mk~gail-vNvarg~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH~ 337 (600)
..+-.+ ++.+ +++++ +|++.-.+ ..+.+++. ..-...|.+-|. |.+ . .+-+.++|+-
T Consensus 89 ~~l~~~-l~~~-~~~IlasntSti~~---~~~a~~~~-~~~r~~G~Hf~~--Pv~-~-----~~lveiv~g~ 146 (293)
T 1zej_A 89 VEVLRE-VERL-TNAPLCSNTSVISV---DDIAERLD-SPSRFLGVHWMN--PPH-V-----MPLVEIVISR 146 (293)
T ss_dssp HHHHHH-HHTT-CCSCEEECCSSSCH---HHHHTTSS-CGGGEEEEEECS--STT-T-----CCEEEEEECT
T ss_pred HHHHHH-HhcC-CCCEEEEECCCcCH---HHHHHHhh-cccceEeEEecC--ccc-c-----CCEEEEECCC
Confidence 555333 5667 99888 47776444 34443332 222235666665 432 2 3455577754
No 80
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=98.88 E-value=4.4e-09 Score=115.41 Aligned_cols=120 Identities=18% Similarity=0.203 Sum_probs=93.2
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHHc---CCc---ccCHHHHhc---cCCEEEEecCCCcccc
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARAI---GVD---LVSFDEAIA---TADFISLHMPLTPATS 266 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~~---g~~---~~~l~ell~---~aDvV~l~~Pl~~~t~ 266 (600)
.++|||||+|.||..+|++|...|++|.+||++.. .+...+. +.. ..+++++++ +||+|++++|..+.++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 83 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVD 83 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHH
Confidence 36899999999999999999999999999999873 3333333 222 247888876 5999999999776777
Q ss_pred ccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCceEEEEeccCCC
Q 007512 267 KVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRVAQAALDVFTEE 317 (600)
Q Consensus 267 ~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i~ga~lDv~~~E 317 (600)
.++ ......|++|.+|||++++...+...+.+.+.+..+.....-|++.+
T Consensus 84 ~vl-~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~ 133 (484)
T 4gwg_A 84 DFI-EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGE 133 (484)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHH
T ss_pred HHH-HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCH
Confidence 777 55677899999999999999888888888887765543434455544
No 81
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.88 E-value=1.2e-09 Score=118.27 Aligned_cols=96 Identities=21% Similarity=0.297 Sum_probs=77.2
Q ss_pred ceeccC-CEEEEEecChhHHHHHHHhhcC------CCEEEEE-CCCC-ChhHHHHcCCcc-----cCHHHHhccCCEEEE
Q 007512 192 GVSLVG-KTLAVLGFGKVGSEVARRAKGL------GMHVIAH-DPYA-PADRARAIGVDL-----VSFDEAIATADFISL 257 (600)
Q Consensus 192 g~~l~g-ktiGIIGlG~IG~~vA~~l~~~------g~~V~~~-d~~~-~~~~a~~~g~~~-----~~l~ell~~aDvV~l 257 (600)
...|.| |+|||||+|.||+++|+.|+.. |++|++. ++.. ..+.+.+.|+.. .++++++++||+|++
T Consensus 48 ~~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVIL 127 (525)
T 3fr7_A 48 PEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLL 127 (525)
T ss_dssp HHHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEE
T ss_pred hHHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEE
Confidence 467999 9999999999999999999987 9998754 4433 556778889874 589999999999999
Q ss_pred ecCCCccccccccHhHhccCCCceEEEEccCCc
Q 007512 258 HMPLTPATSKVLNDETFGKMKKGVRIINVARGG 290 (600)
Q Consensus 258 ~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ 290 (600)
++|.... ..++. +.+..||+|++| -.+.|-
T Consensus 128 aVP~~~~-~eVl~-eI~p~LK~GaIL-s~AaGf 157 (525)
T 3fr7_A 128 LISDAAQ-ADNYE-KIFSHMKPNSIL-GLSHGF 157 (525)
T ss_dssp CSCHHHH-HHHHH-HHHHHSCTTCEE-EESSSH
T ss_pred CCChHHH-HHHHH-HHHHhcCCCCeE-EEeCCC
Confidence 9997654 34665 678889999995 455553
No 82
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=98.86 E-value=3e-09 Score=108.86 Aligned_cols=107 Identities=16% Similarity=0.272 Sum_probs=85.8
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCcc-cCHHHHhccCCEEEEecCCCcccccccc--HhH
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDL-VSFDEAIATADFISLHMPLTPATSKVLN--DET 273 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~-~~l~ell~~aDvV~l~~Pl~~~t~~li~--~~~ 273 (600)
++|+|||+|.||+.+|+.|...|++|.+||++. ..+...+.|+.. .+++++++++|+|++|+|....+..++. +..
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l 85 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 85 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchH
Confidence 489999999999999999998899999999876 334445557754 4788999999999999996655565552 234
Q ss_pred hccCCCceEEEEccCCccccHHHHHHhHhcC
Q 007512 274 FGKMKKGVRIINVARGGVIDEEALVRALDSG 304 (600)
Q Consensus 274 l~~mk~gailvNvarg~ivde~aL~~aL~~g 304 (600)
...+++|.+|||++.+...+.+.+.+.+...
T Consensus 86 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 116 (299)
T 1vpd_A 86 IEGAKPGTVLIDMSSIAPLASREISDALKAK 116 (299)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHTT
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 4668999999999998876677888877764
No 83
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=98.85 E-value=1.4e-09 Score=108.93 Aligned_cols=101 Identities=21% Similarity=0.265 Sum_probs=66.0
Q ss_pred ccccccccceeccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCCh---------------hHH-HHcC-CcccCHH
Q 007512 184 KWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPA---------------DRA-RAIG-VDLVSFD 246 (600)
Q Consensus 184 ~W~~~~~~g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~---------------~~a-~~~g-~~~~~l~ 246 (600)
+|....+...++.+++|||||+|.||+.+|+.|...|++|++||++... ... ...+ ....++.
T Consensus 6 ~~~~~~~~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (245)
T 3dtt_A 6 IHHHHHHENLYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFA 85 (245)
T ss_dssp -------------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHH
T ss_pred ccccccccccccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHH
Confidence 3444445678999999999999999999999999999999999987532 111 1223 2345789
Q ss_pred HHhccCCEEEEecCCCccccccccHhH-hccCCCceEEEEcc
Q 007512 247 EAIATADFISLHMPLTPATSKVLNDET-FGKMKKGVRIINVA 287 (600)
Q Consensus 247 ell~~aDvV~l~~Pl~~~t~~li~~~~-l~~mk~gailvNva 287 (600)
+++++||+|++|+|... ....+.. . ...+ ++.+|||++
T Consensus 86 e~~~~aDvVilavp~~~-~~~~~~~-i~~~~l-~g~ivi~~s 124 (245)
T 3dtt_A 86 DVAAGAELVVNATEGAS-SIAALTA-AGAENL-AGKILVDIA 124 (245)
T ss_dssp HHHHHCSEEEECSCGGG-HHHHHHH-HCHHHH-TTSEEEECC
T ss_pred HHHhcCCEEEEccCcHH-HHHHHHH-hhhhhc-CCCEEEECC
Confidence 99999999999999554 3333321 1 2224 799999999
No 84
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=98.85 E-value=2.9e-09 Score=108.66 Aligned_cols=106 Identities=20% Similarity=0.259 Sum_probs=84.6
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCcc-cCHHHHhccCCEEEEecCCCccccccccH--hH
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDL-VSFDEAIATADFISLHMPLTPATSKVLND--ET 273 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~-~~l~ell~~aDvV~l~~Pl~~~t~~li~~--~~ 273 (600)
++|||||+|.||+.+|+.|...|++|.+|| +. ..+...+.|+.. .++++++++||+|++|+|....+..++.. ..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 82 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGC 82 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhH
Confidence 589999999999999999998999999999 66 344444557654 47889999999999999966555555532 34
Q ss_pred hccCCCceEEEEccCCccccHHHHHHhHhcC
Q 007512 274 FGKMKKGVRIINVARGGVIDEEALVRALDSG 304 (600)
Q Consensus 274 l~~mk~gailvNvarg~ivde~aL~~aL~~g 304 (600)
...+++|.+||+++.+...+.+.+.+.+.+.
T Consensus 83 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 113 (295)
T 1yb4_A 83 AKTSLQGKTIVDMSSISPIETKRFAQRVNEM 113 (295)
T ss_dssp TTSCCTTEEEEECSCCCHHHHHHHHHHHHTT
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 4568999999999999877778888877763
No 85
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=98.84 E-value=2.8e-09 Score=108.91 Aligned_cols=106 Identities=18% Similarity=0.284 Sum_probs=82.4
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHHcCCcc-cCHHHHhccCCEEEEecCCCccccccccH--hH
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARAIGVDL-VSFDEAIATADFISLHMPLTPATSKVLND--ET 273 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~~g~~~-~~l~ell~~aDvV~l~~Pl~~~t~~li~~--~~ 273 (600)
++|||||+|.||+.+|+.|...|++|.+||++.. .+...+.|+.. .++++++++||+|++|+|....++.++.. ..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~ 80 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGI 80 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSG
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhH
Confidence 3799999999999999999999999999999863 34445557754 47889999999999999966666665543 24
Q ss_pred hccCCCceEEEEccCCccccHHHHHHhHhc
Q 007512 274 FGKMKKGVRIINVARGGVIDEEALVRALDS 303 (600)
Q Consensus 274 l~~mk~gailvNvarg~ivde~aL~~aL~~ 303 (600)
+..++++.++||++....-+...+.+.+.+
T Consensus 81 ~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~ 110 (296)
T 2gf2_A 81 LKKVKKGSLLIDSSTIDPAVSKELAKEVEK 110 (296)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHH
T ss_pred HhcCCCCCEEEECCCCCHHHHHHHHHHHHH
Confidence 556899999999877666555666665654
No 86
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=98.84 E-value=3.5e-09 Score=107.57 Aligned_cols=105 Identities=17% Similarity=0.184 Sum_probs=83.2
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhcc
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGK 276 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~ 276 (600)
++|||||+|.||+.+|+.|.. |++|.+||++.. .+...+.|+...++++++++||+|++|+|....+..++ +.....
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~D~vi~~v~~~~~~~~v~-~~l~~~ 79 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVA-EALYPY 79 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHH-HHHTTT
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccCHHHHHhCCCEEEEeCCChHHHHHHH-HHHHhh
Confidence 479999999999999999999 999999998863 33344446654447788899999999999654466555 444567
Q ss_pred CCCceEEEEccCCccccHHHHHHhHhcC
Q 007512 277 MKKGVRIINVARGGVIDEEALVRALDSG 304 (600)
Q Consensus 277 mk~gailvNvarg~ivde~aL~~aL~~g 304 (600)
+++|.+++|++.+...+.+.+.+.+.+.
T Consensus 80 l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 107 (289)
T 2cvz_A 80 LREGTYWVDATSGEPEASRRLAERLREK 107 (289)
T ss_dssp CCTTEEEEECSCCCHHHHHHHHHHHHTT
T ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 8999999999988877777888877764
No 87
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.34 E-value=3.4e-10 Score=110.36 Aligned_cols=94 Identities=16% Similarity=0.244 Sum_probs=75.8
Q ss_pred ccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHh
Q 007512 195 LVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETF 274 (600)
Q Consensus 195 l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l 274 (600)
+.+++|||||+|.||+.+|++|...|++|.+||++...+.....|+...++++++++||+|++|+|.. .+..++ .+
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~aDvVilav~~~-~~~~v~---~l 92 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQVSSLLPRGAEVLCYSEAASRSDVIVLAVHRE-HYDFLA---EL 92 (201)
Confidence 67889999999999999999999999999999987643333334665557888999999999999964 566665 24
Q ss_pred ccCCCceEEEEccCCccc
Q 007512 275 GKMKKGVRIINVARGGVI 292 (600)
Q Consensus 275 ~~mk~gailvNvarg~iv 292 (600)
..++++.+|||+++|-..
T Consensus 93 ~~~~~~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 93 ADSLKGRVLIDVSNNQKM 110 (201)
Confidence 557789999999998753
No 88
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=98.83 E-value=3.2e-09 Score=108.78 Aligned_cols=107 Identities=18% Similarity=0.243 Sum_probs=85.0
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHHcCCcc-cCHHHHhccCCEEEEecCCCcccccccc--HhH
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARAIGVDL-VSFDEAIATADFISLHMPLTPATSKVLN--DET 273 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~~g~~~-~~l~ell~~aDvV~l~~Pl~~~t~~li~--~~~ 273 (600)
++|||||+|.||+.+|+.|...|++|.+||++.. .+...+.|+.. .+++++++++|+|++|+|....++.++. +..
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 84 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGV 84 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchH
Confidence 5899999999999999999988999999998762 33344446654 3788999999999999996665666664 245
Q ss_pred hccCCCceEEEEccCCccccHHHHHHhHhcC
Q 007512 274 FGKMKKGVRIINVARGGVIDEEALVRALDSG 304 (600)
Q Consensus 274 l~~mk~gailvNvarg~ivde~aL~~aL~~g 304 (600)
...++++.+||++++|...+.+.+.+.+.+.
T Consensus 85 ~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~ 115 (301)
T 3cky_A 85 LSACKAGTVIVDMSSVSPSSTLKMAKVAAEK 115 (301)
T ss_dssp HHHSCTTCEEEECCCCCHHHHHHHHHHHHHT
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 5668999999999988766677777777653
No 89
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=98.82 E-value=2.5e-08 Score=108.65 Aligned_cols=166 Identities=15% Similarity=0.131 Sum_probs=103.7
Q ss_pred CCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCcccccc----cccee-ccCCEEEEEecChhHHHHHHHhhcCCCEEEE
Q 007512 151 PTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNK----YVGVS-LVGKTLAVLGFGKVGSEVARRAKGLGMHVIA 225 (600)
Q Consensus 151 p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~----~~g~~-l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~ 225 (600)
.|-|-..+.|.+.+.++. +....++|.... +.... -.=++|||||+|.||..+|..+...|++|++
T Consensus 12 ~~~~~~~~~~~~~~~~~~---------a~~~~~~w~~p~~~~~~~~~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l 82 (460)
T 3k6j_A 12 TGENLYFQGSEVRSYLME---------AHSLAGQWSLPNDRGDHTNSEAYDVNSVAIIGGGTMGKAMAICFGLAGIETFL 82 (460)
T ss_dssp TSGGGGGCBCHHHHHHHH---------TTCCTTSCBCSTTSCBTTSCCCCCCCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred cccchhhhhHHHHHHHHh---------HHHhhccccCCCCccccccCCcccCCEEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 344555566666666665 223345686431 11111 1226899999999999999999999999999
Q ss_pred ECCCCCh---------hHHHHcCC-------------c-ccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceE
Q 007512 226 HDPYAPA---------DRARAIGV-------------D-LVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVR 282 (600)
Q Consensus 226 ~d~~~~~---------~~a~~~g~-------------~-~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gai 282 (600)
||++... +.+.+.|. . ..+++ .+++||+|+.|+|...+.+.-+-++....++++++
T Consensus 83 ~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aI 161 (460)
T 3k6j_A 83 VVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSNCDLIVESVIEDMKLKKELFANLENICKSTCI 161 (460)
T ss_dssp ECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCE
T ss_pred EECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCE
Confidence 9987531 11223332 1 23564 68999999999997766554444556667999999
Q ss_pred EEEccCCccccHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEEcCCC
Q 007512 283 IINVARGGVIDEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTVTPHL 337 (600)
Q Consensus 283 lvNvarg~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilTPH~ 337 (600)
|++.+++ +....+.+.+.. .-...+++-|. |.+ .-+| +.++|+.
T Consensus 162 lasnTSs--l~i~~ia~~~~~-p~r~iG~Hffn--Pv~-~m~L-----vEIv~g~ 205 (460)
T 3k6j_A 162 FGTNTSS--LDLNEISSVLRD-PSNLVGIHFFN--PAN-VIRL-----VEIIYGS 205 (460)
T ss_dssp EEECCSS--SCHHHHHTTSSS-GGGEEEEECCS--STT-TCCE-----EEEECCS
T ss_pred EEecCCC--hhHHHHHHhccC-CcceEEEEecc--hhh-hCCE-----EEEEeCC
Confidence 9654444 234555555543 22236777776 432 2344 4566753
No 90
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=98.80 E-value=9e-09 Score=113.09 Aligned_cols=112 Identities=17% Similarity=0.156 Sum_probs=87.3
Q ss_pred eccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHHc----CCcc-cCHHHHhcc---CCEEEEecCCCcc
Q 007512 194 SLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARAI----GVDL-VSFDEAIAT---ADFISLHMPLTPA 264 (600)
Q Consensus 194 ~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~~----g~~~-~~l~ell~~---aDvV~l~~Pl~~~ 264 (600)
-...++|||||+|.||+.+|+.|...|++|.+||+... .+...+. |+.. .++++++++ ||+|++++|..+.
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~ 91 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAG 91 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHH
Confidence 34567899999999999999999999999999998763 2333332 5543 478888877 9999999997667
Q ss_pred ccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 265 TSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 265 t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
++.++ ++....+++|.+|||++.|...+...+.+.+.+..+
T Consensus 92 v~~vl-~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~ 132 (480)
T 2zyd_A 92 TDAAI-DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGF 132 (480)
T ss_dssp HHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCC
Confidence 77777 355677899999999999987777777777776433
No 91
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=98.78 E-value=8.2e-09 Score=103.73 Aligned_cols=101 Identities=15% Similarity=0.223 Sum_probs=78.4
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC---hhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHh
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP---ADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETF 274 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~---~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l 274 (600)
++|||||+|.||+.+|+.|...|++|++||+... .+...+.|+. .++++++++||+|++|+|.......+ ....
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~aDvvi~~v~~~~~~~~~--~~~~ 77 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT-ETSEEDVYSCPVVISAVTPGVALGAA--RRAG 77 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE-ECCHHHHHTSSEEEECSCGGGHHHHH--HHHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc-CCHHHHHhcCCEEEEECCCHHHHHHH--HHHH
Confidence 4799999999999999999988999999988422 2333445776 77889999999999999965444443 3455
Q ss_pred ccCCCceEEEEccCCccccHHHHHHhHhc
Q 007512 275 GKMKKGVRIINVARGGVIDEEALVRALDS 303 (600)
Q Consensus 275 ~~mk~gailvNvarg~ivde~aL~~aL~~ 303 (600)
..+++ ++||++.+...+.+.+.+.+..
T Consensus 78 ~~~~~--~vi~~s~~~~~~~~~l~~~~~~ 104 (264)
T 1i36_A 78 RHVRG--IYVDINNISPETVRMASSLIEK 104 (264)
T ss_dssp TTCCS--EEEECSCCCHHHHHHHHHHCSS
T ss_pred HhcCc--EEEEccCCCHHHHHHHHHHHhh
Confidence 66776 9999988777667778777765
No 92
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=98.77 E-value=8.1e-09 Score=106.73 Aligned_cols=106 Identities=18% Similarity=0.216 Sum_probs=84.1
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc-CHHHHhccCCEEEEecCCCccccccccH--hH
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV-SFDEAIATADFISLHMPLTPATSKVLND--ET 273 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~~--~~ 273 (600)
++|||||+|.||+.+|+.|...|++|.+||++. ..+...+.|+... ++++++++||+|++|+|....++.++.. ..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~ 110 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGV 110 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhH
Confidence 689999999999999999998999999999876 3344555676543 7889999999999999965556555533 23
Q ss_pred hccCCCceEEEEccCCccccHHHHHHhHhc
Q 007512 274 FGKMKKGVRIINVARGGVIDEEALVRALDS 303 (600)
Q Consensus 274 l~~mk~gailvNvarg~ivde~aL~~aL~~ 303 (600)
+..++++.++||++++.....+.+.+.+..
T Consensus 111 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~ 140 (316)
T 2uyy_A 111 LQGIRPGKCYVDMSTVDADTVTELAQVIVS 140 (316)
T ss_dssp GGGCCTTCEEEECSCCCHHHHHHHHHHHHH
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHH
Confidence 466899999999998876667777777754
No 93
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=98.75 E-value=1.8e-08 Score=111.10 Aligned_cols=107 Identities=16% Similarity=0.201 Sum_probs=86.3
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHH-----cCCcc-cCHHHHhcc---CCEEEEecCCCcccc
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARA-----IGVDL-VSFDEAIAT---ADFISLHMPLTPATS 266 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~-----~g~~~-~~l~ell~~---aDvV~l~~Pl~~~t~ 266 (600)
..+|||||+|.||+.+|+.|...|++|.+||+... .+...+ .|+.. .+++++++. ||+|++++|....++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 89 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVD 89 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHH
Confidence 45899999999999999999999999999999873 333333 35543 478888877 999999999766777
Q ss_pred ccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcC
Q 007512 267 KVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSG 304 (600)
Q Consensus 267 ~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g 304 (600)
.++ +.....+++|.+|||++.+...+...+.+.+.+.
T Consensus 90 ~vl-~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~ 126 (497)
T 2p4q_A 90 ALI-NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKK 126 (497)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHT
T ss_pred HHH-HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHc
Confidence 777 4556778999999999998877777777777664
No 94
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.70 E-value=4.3e-08 Score=103.86 Aligned_cols=106 Identities=24% Similarity=0.288 Sum_probs=84.3
Q ss_pred eccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCCh--hHHHHcCCcccCHHHHhc-cCCEEEEecCCCcccccccc
Q 007512 194 SLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPA--DRARAIGVDLVSFDEAIA-TADFISLHMPLTPATSKVLN 270 (600)
Q Consensus 194 ~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~--~~a~~~g~~~~~l~ell~-~aDvV~l~~Pl~~~t~~li~ 270 (600)
+|.||||+|+|+|+||+.+|+.|..+|++|+++|++... +.+.+.|.+.++.++++. +||+++.|. +.++++
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v~~~~ll~~~~DIvip~a-----~~~~I~ 244 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPCA-----LGAVLN 244 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGTTTCCCSEEEECS-----CSCCBS
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEChHHHhccCCcEeeccc-----hHHHhC
Confidence 799999999999999999999999999999999987532 233445777778888877 899999874 566788
Q ss_pred HhHhccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 271 DETFGKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 271 ~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
.+.++.|+ ..+|++.+++++.++++ .+.|+++.+
T Consensus 245 ~~~~~~lg-~~iV~e~An~p~t~~ea-~~~L~~~Gi 278 (364)
T 1leh_A 245 DFTIPQLK-AKVIAGSADNQLKDPRH-GKYLHELGI 278 (364)
T ss_dssp TTHHHHCC-CSEECCSCSCCBSSHHH-HHHHHHHTC
T ss_pred HHHHHhCC-CcEEEeCCCCCcccHHH-HHHHHhCCC
Confidence 88888884 56889999999877553 455666544
No 95
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=98.69 E-value=3e-08 Score=108.72 Aligned_cols=108 Identities=14% Similarity=0.176 Sum_probs=84.8
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHHc----CCcc-cCHHHHhcc---CCEEEEecCCCcccccc
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARAI----GVDL-VSFDEAIAT---ADFISLHMPLTPATSKV 268 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~~----g~~~-~~l~ell~~---aDvV~l~~Pl~~~t~~l 268 (600)
++|||||+|.||+.+|+.|...|++|.+||+... .+...+. |+.. .+++++++. +|+|++|+|....+..+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v 85 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT 85 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence 5799999999999999999999999999998763 2333322 5543 478888876 99999999976667766
Q ss_pred ccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 269 LNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 269 i~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
+ ++....+++|.+|||++.+...+...+.+.+.+..+
T Consensus 86 l-~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~ 122 (474)
T 2iz1_A 86 I-KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGI 122 (474)
T ss_dssp H-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSC
T ss_pred H-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCC
Confidence 6 345567899999999999887777778777776433
No 96
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=98.67 E-value=3.3e-08 Score=108.67 Aligned_cols=108 Identities=19% Similarity=0.193 Sum_probs=84.7
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHH-----cCCcc-cCHHHHhc---cCCEEEEecCCCccccc
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARA-----IGVDL-VSFDEAIA---TADFISLHMPLTPATSK 267 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~-----~g~~~-~~l~ell~---~aDvV~l~~Pl~~~t~~ 267 (600)
++|||||+|.||+.+|..|...|++|.+||++.. .+...+ .|+.. .+++++++ ++|+|++|+|....+..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 4799999999999999999999999999998863 333344 45543 47888874 89999999997666777
Q ss_pred cccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 268 VLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 268 li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
++. .....+++|.+|||++.|...+...+.+.+.+..+
T Consensus 83 vl~-~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~ 120 (482)
T 2pgd_A 83 FIE-KLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGI 120 (482)
T ss_dssp HHH-HHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred HHH-HHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 763 45567899999999999887676777777766433
No 97
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.67 E-value=1.4e-08 Score=102.34 Aligned_cols=101 Identities=12% Similarity=0.188 Sum_probs=75.6
Q ss_pred cceeccCCEEEEEecChhHHHHHHHhhcCCCE-EEEECCCCC-hhHH-HHcCCcc-cCHHHHhccCCEEEEecCCCcccc
Q 007512 191 VGVSLVGKTLAVLGFGKVGSEVARRAKGLGMH-VIAHDPYAP-ADRA-RAIGVDL-VSFDEAIATADFISLHMPLTPATS 266 (600)
Q Consensus 191 ~g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~-V~~~d~~~~-~~~a-~~~g~~~-~~l~ell~~aDvV~l~~Pl~~~t~ 266 (600)
+..++.+++|||||+|.||+.+|+.+...|++ |.+||++.. .+.. ...|+.. .++++++++||+|++|+|.. ...
T Consensus 4 m~~~~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~-~~~ 82 (266)
T 3d1l_A 4 MKRSIEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDS-AFA 82 (266)
T ss_dssp ---CGGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHH-HHH
T ss_pred hhcCCCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHH-HHH
Confidence 44566778999999999999999999988988 899998752 2223 2337654 37889999999999999954 344
Q ss_pred ccccHhHhccCCCceEEEEccCCcccc
Q 007512 267 KVLNDETFGKMKKGVRIINVARGGVID 293 (600)
Q Consensus 267 ~li~~~~l~~mk~gailvNvarg~ivd 293 (600)
.++ +.....++++.++++++.|...+
T Consensus 83 ~v~-~~l~~~~~~~~ivv~~s~~~~~~ 108 (266)
T 3d1l_A 83 ELL-QGIVEGKREEALMVHTAGSIPMN 108 (266)
T ss_dssp HHH-HHHHTTCCTTCEEEECCTTSCGG
T ss_pred HHH-HHHHhhcCCCcEEEECCCCCchH
Confidence 444 33445688999999999887643
No 98
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.67 E-value=4.2e-07 Score=96.18 Aligned_cols=181 Identities=14% Similarity=0.133 Sum_probs=114.3
Q ss_pred CceEEEEcCCCCCCHHHHhccCCCceEEEEcCcccCccChhHHHhCCceeecC---CCCC-----hHHHHHHH--HHHHH
Q 007512 98 LCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLVVNA---PTAN-----TVAAAEHG--IALLA 167 (600)
Q Consensus 98 ~~d~li~~~~~~~~~~~l~~~~~~Lk~I~~~g~G~d~iD~~aa~~~GI~V~n~---p~~~-----~~~vAE~~--l~lll 167 (600)
++|.++ ....+...+.. ...+++.++......++.-.++++.++|+...|. |.-. -.++++.+ ++.++
T Consensus 66 ~ad~i~-~vksP~~~~~~-~~~~g~~~~~y~~~~~~~~l~~~l~~~gi~~~~~etvp~k~~~~~~l~~~s~~Ag~~a~~~ 143 (361)
T 1pjc_A 66 SREMVV-KVKEPLPAEYD-LMQKDQLLFTYLHLAAARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQF 143 (361)
T ss_dssp TSSEEE-CSSCCCGGGGG-GCCTTCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHH
T ss_pred cCCeEE-EECCCCHHHHH-hhcCCCEEEEEeccccCHHHHHHHHHcCCeEEEEeeeEcccCCccccCcchHHHHHHHHHH
Confidence 688765 33344433332 2234676666666666665578888899888753 4321 12333333 34444
Q ss_pred HHHhchHHHHHHHHcC--ccccccccceeccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHHcCCcc--
Q 007512 168 AMARNVAQADASVKAG--KWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARAIGVDL-- 242 (600)
Q Consensus 168 ~~~R~i~~~~~~~~~g--~W~~~~~~g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~~g~~~-- 242 (600)
.. .++... ..| -+... . ..+.++++.|+|.|.+|+.+++.++.+|++|+++|++.. .+.+.+.+...
T Consensus 144 gA-~nt~~~----~~g~G~~l~~-l--~~l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~ 215 (361)
T 1pjc_A 144 GA-RFLERQ----QGGRGVLLGG-V--PGVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVE 215 (361)
T ss_dssp HH-HHTSGG----GTSCCCCTTC-B--TTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSE
T ss_pred HH-HHHhhc----cCCCceeccC-C--CCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeE
Confidence 33 221110 111 11110 0 247789999999999999999999999999999998762 33343333221
Q ss_pred ------cCHHHHhccCCEEEEecCCCc-cccccccHhHhccCCCceEEEEccC
Q 007512 243 ------VSFDEAIATADFISLHMPLTP-ATSKVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 243 ------~~l~ell~~aDvV~l~~Pl~~-~t~~li~~~~l~~mk~gailvNvar 288 (600)
.++.+.+..+|+|+.+++... .+..++.+..++.||++.+++|++-
T Consensus 216 ~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 216 LLYSNSAEIETAVAEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp EEECCHHHHHHHHHTCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred eeeCCHHHHHHHHcCCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 245677789999999997533 2345567888999999999999984
No 99
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=98.66 E-value=2.3e-08 Score=102.03 Aligned_cols=91 Identities=26% Similarity=0.432 Sum_probs=73.3
Q ss_pred CEEEEEec-ChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhc
Q 007512 198 KTLAVLGF-GKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFG 275 (600)
Q Consensus 198 ktiGIIGl-G~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~ 275 (600)
++|||||+ |.||+.+|+.|...|++|++||++. ..+...+.|+...++.+++++||+|++|+|... +..++ ++...
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~av~~~~-~~~v~-~~l~~ 89 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLALPDNI-IEKVA-EDIVP 89 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEECSCHHH-HHHHH-HHHGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEcCCchH-HHHHH-HHHHH
Confidence 58999999 9999999999999999999999876 334444567665677888999999999999443 55555 34455
Q ss_pred cCCCceEEEEccCCc
Q 007512 276 KMKKGVRIINVARGG 290 (600)
Q Consensus 276 ~mk~gailvNvarg~ 290 (600)
.++++++|||++.|.
T Consensus 90 ~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 90 RVRPGTIVLILDAAA 104 (286)
T ss_dssp GSCTTCEEEESCSHH
T ss_pred hCCCCCEEEECCCCc
Confidence 689999999988776
No 100
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=98.61 E-value=6.4e-08 Score=105.93 Aligned_cols=136 Identities=17% Similarity=0.174 Sum_probs=89.7
Q ss_pred CEEEEEecChhHHHHHHHhhcC--CCEEEEECCCCChhHHH----------------H----cCCcc-cCHHHHhccCCE
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL--GMHVIAHDPYAPADRAR----------------A----IGVDL-VSFDEAIATADF 254 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~--g~~V~~~d~~~~~~~a~----------------~----~g~~~-~~l~ell~~aDv 254 (600)
++|+|||+|.||..+|..|... |++|++||++....... . .++.. .++++.+++||+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aDv 85 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADL 85 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCCE
Confidence 5899999999999999999876 89999999875221111 1 13333 367888999999
Q ss_pred EEEecCCCccccccc-------------cHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCceEEEEe-ccCCCCCC
Q 007512 255 ISLHMPLTPATSKVL-------------NDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRVAQAALD-VFTEEPPP 320 (600)
Q Consensus 255 V~l~~Pl~~~t~~li-------------~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i~ga~lD-v~~~EP~~ 320 (600)
|++|+|......+.+ -+.....|++|.++||+++..+-..+.+.+.+++....+.... .+.+|+..
T Consensus 86 ViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~~~d~~V~~~Pe~~~ 165 (467)
T 2q3e_A 86 VFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFLA 165 (467)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCTTCEEEEEECCCCCC
T ss_pred EEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCCCCCeEEEeCHHHhh
Confidence 999999544332211 1234456899999999998777667777777766432111111 35566543
Q ss_pred CCC---ccccCCcEEE
Q 007512 321 ADS---KLVQHERVTV 333 (600)
Q Consensus 321 ~~~---~L~~~~nvil 333 (600)
... .++..+++++
T Consensus 166 ~G~~~~d~~~~~rivv 181 (467)
T 2q3e_A 166 EGTAIKDLKNPDRVLI 181 (467)
T ss_dssp TTSHHHHHHSCSCEEE
T ss_pred cccchhhccCCCEEEE
Confidence 333 3456666754
No 101
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=98.60 E-value=2.4e-08 Score=97.90 Aligned_cols=93 Identities=16% Similarity=0.224 Sum_probs=71.0
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHh
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETF 274 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l 274 (600)
.+++|+|||+|.||+.+|+.|...|++|.++|++.. .+...+.|+...++++++++||+|++|+|. .....++. +
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~DvVi~av~~-~~~~~v~~---l 102 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVTFQEEAVSSPEVIFVAVFR-EHYSSLCS---L 102 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEEEHHHHTTSCSEEEECSCG-GGSGGGGG---G
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCceecHHHHHhCCCEEEECCCh-HHHHHHHH---H
Confidence 457899999999999999999999999999998752 223333366656888999999999999994 44555553 3
Q ss_pred ccCCCceEEEEccCCccc
Q 007512 275 GKMKKGVRIINVARGGVI 292 (600)
Q Consensus 275 ~~mk~gailvNvarg~iv 292 (600)
..+.++.++||+++|...
T Consensus 103 ~~~~~~~~vv~~s~g~~~ 120 (215)
T 2vns_A 103 SDQLAGKILVDVSNPTEQ 120 (215)
T ss_dssp HHHHTTCEEEECCCCCHH
T ss_pred HHhcCCCEEEEeCCCccc
Confidence 333379999999998754
No 102
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=98.60 E-value=6.6e-08 Score=106.17 Aligned_cols=108 Identities=14% Similarity=0.225 Sum_probs=83.6
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHH-HcC-------Cc-ccCHHHHhcc---CCEEEEecCCCcc
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRAR-AIG-------VD-LVSFDEAIAT---ADFISLHMPLTPA 264 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~-~~g-------~~-~~~l~ell~~---aDvV~l~~Pl~~~ 264 (600)
++|||||+|.||+.+|+.|...|++|.+||+... .+... ..| +. ..+++++++. +|+|++|+|....
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~ 81 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence 4799999999999999999999999999998752 22222 224 33 2478888774 9999999997666
Q ss_pred ccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 265 TSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 265 t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
+..++ +.....+++|.+|||++.|...+.+.+.+.+.+..+
T Consensus 82 v~~vl-~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~ 122 (478)
T 1pgj_A 82 TDSTI-EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGL 122 (478)
T ss_dssp HHHHH-HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTC
T ss_pred HHHHH-HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCC
Confidence 67666 345566899999999999887777778777876433
No 103
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=98.54 E-value=8.7e-08 Score=93.56 Aligned_cols=81 Identities=15% Similarity=0.288 Sum_probs=62.2
Q ss_pred ceeccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccH
Q 007512 192 GVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLND 271 (600)
Q Consensus 192 g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~ 271 (600)
..++.+++|+|||+|.||+.+|+.|...|++|.+||++.. .+++||+|++|+| .+.++.++.+
T Consensus 14 ~~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~----------------~~~~aD~vi~av~-~~~~~~v~~~ 76 (209)
T 2raf_A 14 NLYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ----------------ATTLGEIVIMAVP-YPALAALAKQ 76 (209)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC----------------CSSCCSEEEECSC-HHHHHHHHHH
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH----------------HhccCCEEEEcCC-cHHHHHHHHH
Confidence 3578899999999999999999999999999999998753 4678999999999 6666666542
Q ss_pred hHhccCCCceEEEEccCCcc
Q 007512 272 ETFGKMKKGVRIINVARGGV 291 (600)
Q Consensus 272 ~~l~~mk~gailvNvarg~i 291 (600)
....++ +++++|+++|--
T Consensus 77 -l~~~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 77 -YATQLK-GKIVVDITNPLN 94 (209)
T ss_dssp -THHHHT-TSEEEECCCCBC
T ss_pred -HHHhcC-CCEEEEECCCCC
Confidence 334467 999999998654
No 104
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.54 E-value=1.3e-07 Score=86.30 Aligned_cols=87 Identities=16% Similarity=0.202 Sum_probs=69.2
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCCh--hHHHHcCCc---ccCHHHHhccCCEEEEecCCCccccccccH
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPA--DRARAIGVD---LVSFDEAIATADFISLHMPLTPATSKVLND 271 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~--~~a~~~g~~---~~~l~ell~~aDvV~l~~Pl~~~t~~li~~ 271 (600)
|++++|||.|.||+.+++.|+.+|++|.++|++... ..+.+.+.. ..+++++++++|+|+.|+|.. ..++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~---~~~~~~ 97 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSK---TPIVEE 97 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCS---SCSBCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCC---CcEeeH
Confidence 899999999999999999999999999999987632 234555654 237889999999999999965 234444
Q ss_pred hHhccCCCceEEEEccCC
Q 007512 272 ETFGKMKKGVRIINVARG 289 (600)
Q Consensus 272 ~~l~~mk~gailvNvarg 289 (600)
..+++|.+++|++..
T Consensus 98 ---~~l~~g~~vid~~~p 112 (144)
T 3oj0_A 98 ---RSLMPGKLFIDLGNP 112 (144)
T ss_dssp ---GGCCTTCEEEECCSS
T ss_pred ---HHcCCCCEEEEccCC
Confidence 446889999999864
No 105
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.53 E-value=2.1e-07 Score=100.54 Aligned_cols=115 Identities=16% Similarity=0.073 Sum_probs=79.7
Q ss_pred ccceeccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhHHHHc-------------------CCcc-cCHHHHh
Q 007512 190 YVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAI-------------------GVDL-VSFDEAI 249 (600)
Q Consensus 190 ~~g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~-------------------g~~~-~~l~ell 249 (600)
.++++..-++|+|||+|.+|..+|..|.. |++|++||++...-..... ++.. .++++.+
T Consensus 29 ~~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~ 107 (432)
T 3pid_A 29 QMGRGSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAY 107 (432)
T ss_dssp ------CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHH
T ss_pred ccccccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHH
Confidence 35667777899999999999999999988 9999999987632221112 2232 3688999
Q ss_pred ccCCEEEEecCCCccc-------cccc--cHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 250 ATADFISLHMPLTPAT-------SKVL--NDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 250 ~~aDvV~l~~Pl~~~t-------~~li--~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
++||+|++|+|...+. ..+. -+.... |++|+++|+.+...+-..+.+.+.+.+..+
T Consensus 108 ~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v 172 (432)
T 3pid_A 108 RNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNV 172 (432)
T ss_dssp TTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCE
T ss_pred hCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccE
Confidence 9999999999954211 1121 133445 899999999998777667778777766544
No 106
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=98.50 E-value=1.1e-06 Score=90.27 Aligned_cols=114 Identities=15% Similarity=0.158 Sum_probs=76.0
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHH-----------HcC------------------Cc-ccCHH
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRAR-----------AIG------------------VD-LVSFD 246 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~-----------~~g------------------~~-~~~l~ 246 (600)
++|+|||+|.||..+|..+...|++|++||++.. .+.+. +.| +. ..+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 95 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA 95 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCHH
Confidence 6899999999999999999988999999998752 22211 122 12 23677
Q ss_pred HHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhc-CCceEEEEeccC
Q 007512 247 EAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDS-GRVAQAALDVFT 315 (600)
Q Consensus 247 ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~-g~i~ga~lDv~~ 315 (600)
+.+++||+|++++|...+.+.-+-++....++++++|+....+- ....+.+.+.. .++ .+.+.+.
T Consensus 96 ~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i--~~~~l~~~~~~~~~~--~g~h~~~ 161 (302)
T 1f0y_A 96 SVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSL--QITSIANATTRQDRF--AGLHFFN 161 (302)
T ss_dssp HHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSS--CHHHHHTTSSCGGGE--EEEEECS
T ss_pred HhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCC--CHHHHHHhcCCcccE--EEEecCC
Confidence 78999999999999654433333334445678899988655543 23455554432 234 4555554
No 107
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.47 E-value=1.6e-07 Score=93.76 Aligned_cols=102 Identities=19% Similarity=0.301 Sum_probs=74.0
Q ss_pred CEEEEEecChhHHHHHHHhhcCCC----EEEEECCCCC-hhHH-HHcCCccc-CHHHHhccCCEEEEecCCCcccccccc
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGM----HVIAHDPYAP-ADRA-RAIGVDLV-SFDEAIATADFISLHMPLTPATSKVLN 270 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~----~V~~~d~~~~-~~~a-~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~ 270 (600)
++|||||+|.||+.+|+.|...|+ +|.+||++.. .+.. .+.|+... +.++++++||+|++|+|. .....++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~-~~~~~v~- 80 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKP-DLYASII- 80 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCT-TTHHHHC-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCH-HHHHHHH-
Confidence 689999999999999999999898 9999999763 2333 34577654 789999999999999983 3344444
Q ss_pred HhHhccCCCceEEEEccCCccccHHHHHHhHhc
Q 007512 271 DETFGKMKKGVRIINVARGGVIDEEALVRALDS 303 (600)
Q Consensus 271 ~~~l~~mk~gailvNvarg~ivde~aL~~aL~~ 303 (600)
++....++++.++|.+..|- ..+.+.+.+..
T Consensus 81 ~~l~~~l~~~~~vvs~~~gi--~~~~l~~~~~~ 111 (247)
T 3gt0_A 81 NEIKEIIKNDAIIVTIAAGK--SIESTENAFNK 111 (247)
T ss_dssp ---CCSSCTTCEEEECSCCS--CHHHHHHHHCS
T ss_pred HHHHhhcCCCCEEEEecCCC--CHHHHHHHhCC
Confidence 33445578898888665543 34455555544
No 108
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=98.44 E-value=2e-07 Score=96.91 Aligned_cols=104 Identities=17% Similarity=0.297 Sum_probs=77.8
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCC----CEEEEECCCCC---hhHHHHcCCccc-CHHHHhccCCEEEEecCCCccccc
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLG----MHVIAHDPYAP---ADRARAIGVDLV-SFDEAIATADFISLHMPLTPATSK 267 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g----~~V~~~d~~~~---~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~ 267 (600)
..++|||||+|.||+.+|..|...| .+|.+||+... .+...+.|+... +..+++++||+|++|+| ......
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~~~ 99 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHIIPF 99 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHHHH
Confidence 3458999999999999999999888 79999998864 334456687654 78889999999999999 455555
Q ss_pred cccHhHhccCCCceEEEEccCCccccHHHHHHhHhc
Q 007512 268 VLNDETFGKMKKGVRIINVARGGVIDEEALVRALDS 303 (600)
Q Consensus 268 li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~ 303 (600)
++. +....++++.+||+++.|-- .+.+.+.+.+
T Consensus 100 vl~-~l~~~l~~~~ivvs~s~gi~--~~~l~~~l~~ 132 (322)
T 2izz_A 100 ILD-EIGADIEDRHIVVSCAAGVT--ISSIEKKLSA 132 (322)
T ss_dssp HHH-HHGGGCCTTCEEEECCTTCC--HHHHHHHHHT
T ss_pred HHH-HHHhhcCCCCEEEEeCCCCC--HHHHHHHHhh
Confidence 553 34456889999999976543 3445555543
No 109
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=98.42 E-value=4.5e-07 Score=90.80 Aligned_cols=99 Identities=15% Similarity=0.233 Sum_probs=73.7
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHH-HcCCccc-CHHHHhccCCEEEEecCCCccccccccHhHh
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRAR-AIGVDLV-SFDEAIATADFISLHMPLTPATSKVLNDETF 274 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~-~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l 274 (600)
++|||||+|.||+.+++.|...|.+|.+||++.. .+... ..|+... +++++++++|+|++|+| .... .+.+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~-----~~v~ 77 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLF-----ETVL 77 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGH-----HHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhH-----HHHH
Confidence 5899999999999999999988999999998763 22222 3477643 78899999999999999 4433 3344
Q ss_pred ccCCCceEEEEccCCccccHHHHHHhHhcC
Q 007512 275 GKMKKGVRIINVARGGVIDEEALVRALDSG 304 (600)
Q Consensus 275 ~~mk~gailvNvarg~ivde~aL~~aL~~g 304 (600)
..+++|.+++++..|-- .+.+.+.+..+
T Consensus 78 ~~l~~~~~vv~~~~~~~--~~~l~~~~~~~ 105 (259)
T 2ahr_A 78 KPLHFKQPIISMAAGIS--LQRLATFVGQD 105 (259)
T ss_dssp TTSCCCSCEEECCTTCC--HHHHHHHHCTT
T ss_pred HHhccCCEEEEeCCCCC--HHHHHHhcCCC
Confidence 45678999999976543 34455555543
No 110
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.40 E-value=5.2e-07 Score=89.65 Aligned_cols=70 Identities=9% Similarity=0.160 Sum_probs=56.9
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhcc
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGK 276 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~ 276 (600)
.++|||||+|+||+++|+.|+..|++|.+||+. ++ +++|| ++|+|.. ....++ .+....
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~----------------~~-~~~aD--ilavP~~-ai~~vl-~~l~~~ 64 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP----------------ED-IRDFE--LVVIDAH-GVEGYV-EKLSAF 64 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG----------------GG-GGGCS--EEEECSS-CHHHHH-HHHHTT
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH----------------HH-hccCC--EEEEcHH-HHHHHH-HHHHHh
Confidence 468999999999999999999999999999972 22 57899 8999965 455555 344556
Q ss_pred CCCceEEEEcc
Q 007512 277 MKKGVRIINVA 287 (600)
Q Consensus 277 mk~gailvNva 287 (600)
+++|++++|++
T Consensus 65 l~~g~ivvd~s 75 (232)
T 3dfu_A 65 ARRGQMFLHTS 75 (232)
T ss_dssp CCTTCEEEECC
T ss_pred cCCCCEEEEEC
Confidence 89999999974
No 111
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=98.40 E-value=7.7e-07 Score=97.76 Aligned_cols=128 Identities=23% Similarity=0.243 Sum_probs=84.8
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHH-----------cCC-------------c-ccCHHHHhc
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARA-----------IGV-------------D-LVSFDEAIA 250 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~-----------~g~-------------~-~~~l~ell~ 250 (600)
-++|||||+|.||+.+|..+...|++|++||++.. .+.+.+ .|. . ..+++ .++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~ 83 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-ALA 83 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-GGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-Hhc
Confidence 35899999999999999999999999999998762 222221 221 1 12454 689
Q ss_pred cCCEEEEecCCCccccccccHhHhccCCCceEE-EEccCCccccHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccCC
Q 007512 251 TADFISLHMPLTPATSKVLNDETFGKMKKGVRI-INVARGGVIDEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQHE 329 (600)
Q Consensus 251 ~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gail-vNvarg~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~ 329 (600)
+||+|+.|+|...+.+.-+-++....++++++| +|++.-.+ ..+.+.+.. .-.-.+++.|.+-|. . +
T Consensus 84 ~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i---~~ia~~~~~-p~~~ig~hf~~Pa~v---~-----~ 151 (483)
T 3mog_A 84 AADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISI---TAIAAEIKN-PERVAGLHFFNPAPV---M-----K 151 (483)
T ss_dssp GCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCH---HHHTTTSSS-GGGEEEEEECSSTTT---C-----C
T ss_pred CCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCH---HHHHHHccC-ccceEEeeecChhhh---C-----C
Confidence 999999999977655443334455668999999 57765433 455444432 222367777765433 2 3
Q ss_pred cEEEcCCC
Q 007512 330 RVTVTPHL 337 (600)
Q Consensus 330 nvilTPH~ 337 (600)
-+.+.|+.
T Consensus 152 Lvevv~g~ 159 (483)
T 3mog_A 152 LVEVVSGL 159 (483)
T ss_dssp EEEEEECS
T ss_pred eEEEecCC
Confidence 45566654
No 112
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=98.37 E-value=3.1e-07 Score=91.98 Aligned_cols=99 Identities=20% Similarity=0.267 Sum_probs=71.3
Q ss_pred CEEEEEecChhHHHHHHHhhcCC-CEEEEECCCCC-hhHHHH-cCCccc-CHHHHhccCCEEEEecCCCccccccccHhH
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLG-MHVIAHDPYAP-ADRARA-IGVDLV-SFDEAIATADFISLHMPLTPATSKVLNDET 273 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g-~~V~~~d~~~~-~~~a~~-~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~~~~ 273 (600)
++|||||+|.||+.+|+.|...| .+|.+||++.. .+...+ .|+... ++++++ +||+|++|+| ......++..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~~v~~~-- 76 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDMEAACKN-- 76 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHHHHHTT--
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHHHHHHH--
Confidence 47999999999999999999888 99999998752 233333 477643 677788 9999999999 5444444321
Q ss_pred hccCCCceEEEEccCCccccHHHHHHhHhcC
Q 007512 274 FGKMKKGVRIINVARGGVIDEEALVRALDSG 304 (600)
Q Consensus 274 l~~mk~gailvNvarg~ivde~aL~~aL~~g 304 (600)
+.. + +.++++++.|-- .+.+.+.+..+
T Consensus 77 l~~-~-~~ivv~~~~g~~--~~~l~~~~~~~ 103 (263)
T 1yqg_A 77 IRT-N-GALVLSVAAGLS--VGTLSRYLGGT 103 (263)
T ss_dssp CCC-T-TCEEEECCTTCC--HHHHHHHTTSC
T ss_pred hcc-C-CCEEEEecCCCC--HHHHHHHcCCC
Confidence 222 4 899999966543 35666666654
No 113
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.35 E-value=5.8e-07 Score=91.70 Aligned_cols=109 Identities=16% Similarity=0.186 Sum_probs=79.1
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCC---EEEEECCCCC-hhHHHH-cCCccc-CHHHHhccCCEEEEecCCCcccccccc
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGM---HVIAHDPYAP-ADRARA-IGVDLV-SFDEAIATADFISLHMPLTPATSKVLN 270 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~---~V~~~d~~~~-~~~a~~-~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~ 270 (600)
.++|||||+|.||+.+|+.+...|+ +|.+||++.. .+...+ .|+... +..+++++||+|++|+|. .....++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p-~~~~~vl~ 81 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP-HQIKMVCE 81 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG-GGHHHHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH-HHHHHHHH
Confidence 4789999999999999999998888 8999999873 333333 477654 788999999999999983 33444442
Q ss_pred HhHhcc-CCCceEEEEccCCccccHHHHHHhHhc-CCceEE
Q 007512 271 DETFGK-MKKGVRIINVARGGVIDEEALVRALDS-GRVAQA 309 (600)
Q Consensus 271 ~~~l~~-mk~gailvNvarg~ivde~aL~~aL~~-g~i~ga 309 (600)
+.-.. ++++.+||++..|-- .+.+.+.+.. .++.++
T Consensus 82 -~l~~~~l~~~~iiiS~~agi~--~~~l~~~l~~~~~vvr~ 119 (280)
T 3tri_A 82 -ELKDILSETKILVISLAVGVT--TPLIEKWLGKASRIVRA 119 (280)
T ss_dssp -HHHHHHHTTTCEEEECCTTCC--HHHHHHHHTCCSSEEEE
T ss_pred -HHHhhccCCCeEEEEecCCCC--HHHHHHHcCCCCeEEEE
Confidence 23333 688888888776543 4566666765 355444
No 114
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.32 E-value=1e-06 Score=95.89 Aligned_cols=105 Identities=19% Similarity=0.215 Sum_probs=74.1
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCCCh-hHHHH-------------------cC-Ccc-cCHHHHhccCCEE
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPA-DRARA-------------------IG-VDL-VSFDEAIATADFI 255 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~-~~a~~-------------------~g-~~~-~~l~ell~~aDvV 255 (600)
++|+|||+|.+|..+|..|...|++|++||++... +...+ .+ +.. .++++++++||+|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvV 82 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADII 82 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEE
Confidence 58999999999999999999999999999987532 22222 11 222 3688889999999
Q ss_pred EEecCCCc---------cccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhc
Q 007512 256 SLHMPLTP---------ATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDS 303 (600)
Q Consensus 256 ~l~~Pl~~---------~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~ 303 (600)
++|+|... ..+..+ +.....+++|.++|+++.-.+-..+.+.+.+.+
T Consensus 83 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 83 FIAVGTPAGEDGSADMSYVLDAA-RSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCcccCCCcChHHHHHHH-HHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 99999542 222222 344556899999999986444334555554443
No 115
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=98.32 E-value=3e-06 Score=92.54 Aligned_cols=113 Identities=19% Similarity=0.210 Sum_probs=74.9
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHH-----------cC-----------Cc-ccCHHHHhccC
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARA-----------IG-----------VD-LVSFDEAIATA 252 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~-----------~g-----------~~-~~~l~ell~~a 252 (600)
=++|+|||+|.||..+|..+...|++|++||++.. .+.+.+ .| .. ..++ +.+++|
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~a 115 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTV 115 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCC
Confidence 36899999999999999999999999999998752 222211 11 01 1255 568899
Q ss_pred CEEEEecCCCccccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhc-CCceEEEEecc
Q 007512 253 DFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDS-GRVAQAALDVF 314 (600)
Q Consensus 253 DvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~-g~i~ga~lDv~ 314 (600)
|+|+.|+|...+.+.-+-++....++++++|++...+- ....+.+.+.. .++ .+.+.|
T Consensus 116 DlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~--~~~~la~~~~~~~~~--ig~hf~ 174 (463)
T 1zcj_A 116 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSAL--NVDDIASSTDRPQLV--IGTHFF 174 (463)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS--CHHHHHTTSSCGGGE--EEEEEC
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCc--CHHHHHHHhcCCcce--EEeecC
Confidence 99999999654333323234445689999998744433 33356555543 233 566666
No 116
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.31 E-value=1.3e-06 Score=90.47 Aligned_cols=90 Identities=22% Similarity=0.189 Sum_probs=69.0
Q ss_pred cCCEEEEEecChhHHHHHHHhhc-CCC-EEEEECCCCCh-h-HHHHcC--Ccc-cCHHHHhccCCEEEEecCCCcccccc
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKG-LGM-HVIAHDPYAPA-D-RARAIG--VDL-VSFDEAIATADFISLHMPLTPATSKV 268 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~-~g~-~V~~~d~~~~~-~-~a~~~g--~~~-~~l~ell~~aDvV~l~~Pl~~~t~~l 268 (600)
.+++|||||+|.+|+.+++.+.. +|. +|.+||++... + .+...+ +.. .++++++++||+|++|+|.. ..+
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~---~~v 210 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLAT---EPI 210 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCS---SCC
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCC---Ccc
Confidence 46799999999999999999874 476 99999987622 2 233335 543 47999999999999999943 455
Q ss_pred ccHhHhccCCCceEEEEccCCcc
Q 007512 269 LNDETFGKMKKGVRIINVARGGV 291 (600)
Q Consensus 269 i~~~~l~~mk~gailvNvarg~i 291 (600)
+.. ..+++|.+|++++....
T Consensus 211 ~~~---~~l~~g~~vi~~g~~~p 230 (312)
T 2i99_A 211 LFG---EWVKPGAHINAVGASRP 230 (312)
T ss_dssp BCG---GGSCTTCEEEECCCCST
T ss_pred cCH---HHcCCCcEEEeCCCCCC
Confidence 554 46899999999976544
No 117
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.30 E-value=7.7e-06 Score=83.28 Aligned_cols=156 Identities=19% Similarity=0.249 Sum_probs=102.4
Q ss_pred ccCCCHhHHhhhc------CCceEEEEcCCC--CCCH-HHHhccCCCceEEEEcCcccCccChhHHHhCCceeecCCCCC
Q 007512 84 AYNLSPEELCTKI------SLCDALIVRSGT--KVNR-DVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLVVNAPTAN 154 (600)
Q Consensus 84 ~~~~~~~el~~~i------~~~d~li~~~~~--~~~~-~~l~~~~~~Lk~I~~~g~G~d~iD~~aa~~~GI~V~n~p~~~ 154 (600)
....+++||.+.+ .++|++++..+- ++++ .+++.-.| -| -+|.+-. ...|-.+.+.++..
T Consensus 71 p~~~s~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p-~K-------DVDg~~~---~N~g~l~~g~~~g~ 139 (285)
T 3p2o_A 71 NENITQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIIS-SK-------DVDGFHP---INVGYLNLGLESGF 139 (285)
T ss_dssp CTTCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCG-GG-------CTTCCSH---HHHHHHHTTCCSSC
T ss_pred CCCCCHHHHHHHHHHHhCCCCCCEEEecCCCCCCcCHHHHHhhCCc-cc-------ccccCCH---hhhhhhhcCCCCCC
Confidence 3446788887766 578999998642 3443 34454322 11 1233211 01111222233322
Q ss_pred hHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecCh-hHHHHHHHhhcCCCEEEEECCCCChh
Q 007512 155 TVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGK-VGSEVARRAKGLGMHVIAHDPYAPAD 233 (600)
Q Consensus 155 ~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~-IG~~vA~~l~~~g~~V~~~d~~~~~~ 233 (600)
..+++.-++-++ + ..+.++.||++.|||.|. +|+.+|..|...|++|..++++.
T Consensus 140 ~PcTp~gv~~lL----~------------------~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t--- 194 (285)
T 3p2o_A 140 LPCTPLGVMKLL----K------------------AYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT--- 194 (285)
T ss_dssp CCHHHHHHHHHH----H------------------HTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC---
T ss_pred CCCCHHHHHHHH----H------------------HhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc---
Confidence 334554444322 1 246789999999999988 69999999999999999998653
Q ss_pred HHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCcc
Q 007512 234 RARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGV 291 (600)
Q Consensus 234 ~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~i 291 (600)
.++++.+++||+|+.++|. .+++..++ +|||+++||+|.-.+
T Consensus 195 ---------~~L~~~~~~ADIVI~Avg~----p~~I~~~~---vk~GavVIDVgi~~~ 236 (285)
T 3p2o_A 195 ---------KDLSLYTRQADLIIVAAGC----VNLLRSDM---VKEGVIVVDVGINRL 236 (285)
T ss_dssp ---------SCHHHHHTTCSEEEECSSC----TTCBCGGG---SCTTEEEEECCCEEC
T ss_pred ---------hhHHHHhhcCCEEEECCCC----CCcCCHHH---cCCCeEEEEeccCcc
Confidence 2588999999999999983 34576654 599999999996553
No 118
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.29 E-value=2e-06 Score=93.54 Aligned_cols=105 Identities=16% Similarity=0.158 Sum_probs=75.3
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcC---------------------Ccc-cCHHHHhccCCEE
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIG---------------------VDL-VSFDEAIATADFI 255 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g---------------------~~~-~~l~ell~~aDvV 255 (600)
-+|+|||+|.+|..+|..|...|++|++||++...-.....| +.. .++.+.+++||+|
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDvv 88 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADAV 88 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSEE
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCEE
Confidence 479999999999999999999999999999887432222222 222 3788899999999
Q ss_pred EEecCCCcc----------ccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhc
Q 007512 256 SLHMPLTPA----------TSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDS 303 (600)
Q Consensus 256 ~l~~Pl~~~----------t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~ 303 (600)
++|+|.... .+..+ +.....|++|.++|+++.-.+-..+.+.+.+.+
T Consensus 89 ii~Vptp~~~~~~~~Dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e 145 (446)
T 4a7p_A 89 FIAVGTPSRRGDGHADLSYVFAAA-REIAENLTKPSVIVTKSTVPVGTGDEVERIIAE 145 (446)
T ss_dssp EECCCCCBCTTTCCBCTHHHHHHH-HHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCCccccCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 999984321 12222 345567999999999986554445555555544
No 119
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.29 E-value=8.6e-07 Score=96.05 Aligned_cols=105 Identities=15% Similarity=0.182 Sum_probs=74.3
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCCCh-hHHHH-------------------cC-Ccc-cCHHHHhccCCEE
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPA-DRARA-------------------IG-VDL-VSFDEAIATADFI 255 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~-~~a~~-------------------~g-~~~-~~l~ell~~aDvV 255 (600)
++|+|||+|.||..+|..|...|++|++||++... +...+ .| +.. .++++.+++||+|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv 80 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence 47999999999999999999999999999987532 22222 22 222 3677889999999
Q ss_pred EEecCCCcc---------ccccccHhHhccCCC---ceEEEEccCCcccc-HHHHHHhHhc
Q 007512 256 SLHMPLTPA---------TSKVLNDETFGKMKK---GVRIINVARGGVID-EEALVRALDS 303 (600)
Q Consensus 256 ~l~~Pl~~~---------t~~li~~~~l~~mk~---gailvNvarg~ivd-e~aL~~aL~~ 303 (600)
++|+|.... ....+ +.....|++ +.++|+++...+-. .+.+.+.+++
T Consensus 81 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~ 140 (436)
T 1mv8_A 81 FICVGTPSKKNGDLDLGYIETVC-REIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIED 140 (436)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHH
T ss_pred EEEcCCCcccCCCcchHHHHHHH-HHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHH
Confidence 999995443 22222 233445788 99999998766544 5556666654
No 120
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=98.26 E-value=9.1e-06 Score=82.79 Aligned_cols=158 Identities=18% Similarity=0.235 Sum_probs=104.6
Q ss_pred EEEccCCCHhHHhhhc------CCceEEEEcCCC--CCCHH-HHhccCCCceEEEEcCcccCccChhHHHhCCceeecCC
Q 007512 81 VDCAYNLSPEELCTKI------SLCDALIVRSGT--KVNRD-VFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLVVNAP 151 (600)
Q Consensus 81 v~~~~~~~~~el~~~i------~~~d~li~~~~~--~~~~~-~l~~~~~~Lk~I~~~g~G~d~iD~~aa~~~GI~V~n~p 151 (600)
..+....+++|+.+.+ .++|++++..+- +++++ +++.-.| -| -+|.+-..- .|=.+.+.+
T Consensus 68 ~~lp~~~s~~ell~~I~~lN~D~~V~GIlvqlPLP~~id~~~i~~~I~p-~K-------DVDG~~p~n---~g~l~~g~~ 136 (288)
T 1b0a_A 68 YDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHP-DK-------DVDGFHPYN---VGRLCQRAP 136 (288)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHTTSCT-TT-------CTTCCSHHH---HHHHHTTCC
T ss_pred EECCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhccCC-cc-------CcccCCccc---hhHHhCCCC
Confidence 3344556788887665 578999998643 35544 4443322 12 234332211 111222223
Q ss_pred CCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecCh-hHHHHHHHhhcCCCEEEEECCCC
Q 007512 152 TANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGK-VGSEVARRAKGLGMHVIAHDPYA 230 (600)
Q Consensus 152 ~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~-IG~~vA~~l~~~g~~V~~~d~~~ 230 (600)
....++++-++.++ + ..+.++.|+++.|||.|. +|+.+|+.|...|++|..++.+.
T Consensus 137 -~~~PcTp~gi~~ll----~------------------~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t 193 (288)
T 1b0a_A 137 -RLRPCTPRGIVTLL----E------------------RYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT 193 (288)
T ss_dssp -SSCCHHHHHHHHHH----H------------------HTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred -CCCCCcHHHHHHHH----H------------------HcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 23445555544332 1 246789999999999997 59999999999999999998553
Q ss_pred ChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCcc
Q 007512 231 PADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGV 291 (600)
Q Consensus 231 ~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~i 291 (600)
.++.+.+++||+|+.+++.. +++..+. +|+|+++||+|.-.+
T Consensus 194 ------------~~L~~~~~~ADIVI~Avg~p----~lI~~~~---vk~GavVIDVgi~r~ 235 (288)
T 1b0a_A 194 ------------KNLRHHVENADLLIVAVGKP----GFIPGDW---IKEGAIVIDVGINRL 235 (288)
T ss_dssp ------------SCHHHHHHHCSEEEECSCCT----TCBCTTT---SCTTCEEEECCCEEC
T ss_pred ------------hhHHHHhccCCEEEECCCCc----CcCCHHH---cCCCcEEEEccCCcc
Confidence 25889999999999999932 3576665 499999999997554
No 121
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.23 E-value=2.4e-06 Score=89.16 Aligned_cols=89 Identities=26% Similarity=0.267 Sum_probs=67.7
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHHc-CC---------------cccCHHHHhccCCEEEEecC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARAI-GV---------------DLVSFDEAIATADFISLHMP 260 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~~-g~---------------~~~~l~ell~~aDvV~l~~P 260 (600)
++|+|||+|.||+.+|..|...|++|.+||++.. .+...+. ++ ...+++++++.+|+|++|+|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 84 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 84 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCC
Confidence 6899999999999999999999999999998752 3333333 21 12378888999999999999
Q ss_pred CCccccccccHhHhccCCCceEEEEccCC
Q 007512 261 LTPATSKVLNDETFGKMKKGVRIINVARG 289 (600)
Q Consensus 261 l~~~t~~li~~~~l~~mk~gailvNvarg 289 (600)
... +..++ +.....++++++++++ .|
T Consensus 85 ~~~-~~~~~-~~l~~~l~~~~~vv~~-~~ 110 (359)
T 1bg6_A 85 AIH-HASIA-ANIASYISEGQLIILN-PG 110 (359)
T ss_dssp GGG-HHHHH-HHHGGGCCTTCEEEES-SC
T ss_pred chH-HHHHH-HHHHHhCCCCCEEEEc-CC
Confidence 544 44444 3445568999999998 44
No 122
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=98.20 E-value=2.5e-06 Score=82.90 Aligned_cols=72 Identities=13% Similarity=0.153 Sum_probs=61.1
Q ss_pred cEEEEEecCCCCChhhHHhhhhcCCccccceEeeeecCCC---cEEEEEEeCCCCcHHHHHHHhcCCCcceEEEe
Q 007512 527 SIILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVAPRK---HAVMAIGVDEQPRKETLKKIGDVPAIEEFVFL 598 (600)
Q Consensus 527 ~~Liv~~~D~pG~Ia~V~~iL~~~~INIa~m~v~R~~~g~---~al~~i~~D~~~~~~~l~~l~~~~~v~~v~~i 598 (600)
-+|.+.+.|+||+++.|++.|+++++||.+|+..+..+|+ .|.+.+++++...++++++|+++|+|.+++.+
T Consensus 5 VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~d~~Le~LL~kLrkI~gV~~V~Rv 79 (223)
T 1y7p_A 5 RGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEGGDFEKILERVKTFDYIIEIEEE 79 (223)
T ss_dssp EEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECSSCHHHHHHHHHTCTTEEEEEEE
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEECCCCHHHHHHHHhCCCCeeEEEEE
Confidence 3678889999999999999999999999999998876544 68899999999667999999999999999876
No 123
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.20 E-value=1.1e-06 Score=85.16 Aligned_cols=114 Identities=15% Similarity=0.222 Sum_probs=78.1
Q ss_pred CEEEEEe-cChhHHHHHHHhhcCCCEEEEECCCCCh-hHHH-HcC-------CcccCHHHHhccCCEEEEecCCCccccc
Q 007512 198 KTLAVLG-FGKVGSEVARRAKGLGMHVIAHDPYAPA-DRAR-AIG-------VDLVSFDEAIATADFISLHMPLTPATSK 267 (600)
Q Consensus 198 ktiGIIG-lG~IG~~vA~~l~~~g~~V~~~d~~~~~-~~a~-~~g-------~~~~~l~ell~~aDvV~l~~Pl~~~t~~ 267 (600)
++|+||| .|.||+.+++.|...|++|.++|++... +... ..+ +...++++++++||+|++++| ...+..
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~-~~~~~~ 79 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIP-WEHAID 79 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSC-HHHHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCC-hhhHHH
Confidence 4799999 9999999999999999999999987522 2221 112 333468888999999999999 344444
Q ss_pred cccHhHhccCCCceEEEEccCCcccc------------HHHHHHhHhcCCceEEEEeccCCCC
Q 007512 268 VLNDETFGKMKKGVRIINVARGGVID------------EEALVRALDSGRVAQAALDVFTEEP 318 (600)
Q Consensus 268 li~~~~l~~mk~gailvNvarg~ivd------------e~aL~~aL~~g~i~ga~lDv~~~EP 318 (600)
++. +....++ +.+++|++.|--.+ .+.+.+.+...+ .++.+.+.|
T Consensus 80 ~~~-~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~~~----~v~~~~~~~ 136 (212)
T 1jay_A 80 TAR-DLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLESEK----VVSALHTIP 136 (212)
T ss_dssp HHH-HTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTCSC----EEECCTTCC
T ss_pred HHH-HHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCCCe----EEEEccchH
Confidence 443 2223354 89999999765421 466666665433 346666654
No 124
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=98.19 E-value=1.3e-06 Score=87.44 Aligned_cols=98 Identities=17% Similarity=0.183 Sum_probs=69.5
Q ss_pred CCEEEEEecChhHHHHHHHhhcCC----CEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEecCCCccccccccH
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLG----MHVIAHDPYAPADRARAIGVDLV-SFDEAIATADFISLHMPLTPATSKVLND 271 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g----~~V~~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~~ 271 (600)
.++|||||+|.||+.+|+.|...| .+|.+||++... .|+... +.++++++||+|++|+| ......++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-----~g~~~~~~~~~~~~~~D~vi~~v~-~~~~~~v~~- 76 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN-----TTLNYMSSNEELARHCDIIVCAVK-PDIAGSVLN- 76 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-----SSSEECSCHHHHHHHCSEEEECSC-TTTHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-----CceEEeCCHHHHHhcCCEEEEEeC-HHHHHHHHH-
Confidence 468999999999999999998777 689999987643 466544 78889999999999999 444555543
Q ss_pred hHhccCCCceEEEEccCCccccHHHHHHhHhcC
Q 007512 272 ETFGKMKKGVRIINVARGGVIDEEALVRALDSG 304 (600)
Q Consensus 272 ~~l~~mk~gailvNvarg~ivde~aL~~aL~~g 304 (600)
+....++++.++++++.-+ .+.+.+.+..+
T Consensus 77 ~l~~~l~~~~vv~~~~gi~---~~~l~~~~~~~ 106 (262)
T 2rcy_A 77 NIKPYLSSKLLISICGGLN---IGKLEEMVGSE 106 (262)
T ss_dssp HSGGGCTTCEEEECCSSCC---HHHHHHHHCTT
T ss_pred HHHHhcCCCEEEEECCCCC---HHHHHHHhCCC
Confidence 2334455555555554333 34555555543
No 125
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.19 E-value=5.3e-06 Score=88.96 Aligned_cols=106 Identities=15% Similarity=0.132 Sum_probs=75.0
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCCCh-hHHHHcCC------------------cc-cCHHHHhccCCEEEE
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPA-DRARAIGV------------------DL-VSFDEAIATADFISL 257 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~-~~a~~~g~------------------~~-~~l~ell~~aDvV~l 257 (600)
++|+|||+|.||..+|..|.. |.+|++||++... +...+.+. .. .++.+.+++||+|++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence 479999999999999999998 9999999987532 22222232 11 256778899999999
Q ss_pred ecCCCc----------cccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 258 HMPLTP----------ATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 258 ~~Pl~~----------~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
|+|... .....+ +.... ++++.++|+.+.-++-..+.+.+.+....+
T Consensus 80 avpt~~~~~~~~~dl~~v~~v~-~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~~v 136 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQHVETVI-KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTDRI 136 (402)
T ss_dssp CCCCCEETTTTEECCHHHHHHH-HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCSCE
T ss_pred ecCCCcccCCCCccHHHHHHHH-HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCCeE
Confidence 999552 123233 23344 889999999776665556677766655544
No 126
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=98.18 E-value=1.9e-06 Score=89.13 Aligned_cols=90 Identities=16% Similarity=0.212 Sum_probs=67.4
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECC--CC-ChhHHHHcCC-----------ccc---CHHHHhccCCEEEEecC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDP--YA-PADRARAIGV-----------DLV---SFDEAIATADFISLHMP 260 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~--~~-~~~~a~~~g~-----------~~~---~l~ell~~aDvV~l~~P 260 (600)
++|+|||+|.||+.+|..|...|.+|.+||+ +. ..+...+.|. ... ++.+.+++||+|++|+|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence 4799999999999999999988999999998 54 2233333342 222 56778899999999999
Q ss_pred CCccccccccHhHhccCCCceEEEEccCCc
Q 007512 261 LTPATSKVLNDETFGKMKKGVRIINVARGG 290 (600)
Q Consensus 261 l~~~t~~li~~~~l~~mk~gailvNvarg~ 290 (600)
.. .+..++. .... ++++.++|++..|-
T Consensus 81 ~~-~~~~v~~-~i~~-l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 81 TD-GVLPVMS-RILP-YLKDQYIVLISKGL 107 (335)
T ss_dssp GG-GHHHHHH-HHTT-TCCSCEEEECCCSE
T ss_pred hH-HHHHHHH-HHhc-CCCCCEEEEEcCcC
Confidence 44 4554442 3445 88899999998764
No 127
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.17 E-value=3e-06 Score=93.00 Aligned_cols=104 Identities=17% Similarity=0.140 Sum_probs=70.3
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCCh-hHHHHc-------C-------------Ccc-cCHHHHhccCCE
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPA-DRARAI-------G-------------VDL-VSFDEAIATADF 254 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~-~~a~~~-------g-------------~~~-~~l~ell~~aDv 254 (600)
.++|+|||+|.||..+|..|...|++|++||++... +...+. | +.. .++++.+++||+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDv 87 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDV 87 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSE
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCE
Confidence 469999999999999999999999999999987532 222221 1 111 256678899999
Q ss_pred EEEecCCC---------ccccccccHhHhccCCCceEEEEccCCccccHHHHHHhH
Q 007512 255 ISLHMPLT---------PATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRAL 301 (600)
Q Consensus 255 V~l~~Pl~---------~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL 301 (600)
|++|+|.. ...+..+ +.....+++++++|+.+...+=..+.+.+.+
T Consensus 88 viiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l 142 (478)
T 2y0c_A 88 QFIAVGTPPDEDGSADLQYVLAAA-RNIGRYMTGFKVIVDKSTVPVGTAERVRAAV 142 (478)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHH
T ss_pred EEEEeCCCcccCCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCcCCCchHHHHHHH
Confidence 99999942 1222222 2344568999999999743232334444433
No 128
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=98.16 E-value=2e-06 Score=87.80 Aligned_cols=107 Identities=16% Similarity=0.166 Sum_probs=74.3
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCcc-------------cCHHHHhc---cCCEEEEecC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDL-------------VSFDEAIA---TADFISLHMP 260 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~-------------~~l~ell~---~aDvV~l~~P 260 (600)
++|+|||+|.||+.+|..|...|.+|.+||++. ..+...+.|+.. .+.+++.+ ++|+|++|+|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 589999999999999999998899999999875 233333445321 23345444 8999999999
Q ss_pred CCccccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCce
Q 007512 261 LTPATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRVA 307 (600)
Q Consensus 261 l~~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i~ 307 (600)
. ..+..++ +.....++++.++|++..|-- ..+.+.+.+...++.
T Consensus 84 ~-~~~~~v~-~~l~~~l~~~~~iv~~~~g~~-~~~~l~~~~~~~~vi 127 (316)
T 2ew2_A 84 A-QQLDAMF-KAIQPMITEKTYVLCLLNGLG-HEDVLEKYVPKENIL 127 (316)
T ss_dssp H-HHHHHHH-HHHGGGCCTTCEEEECCSSSC-THHHHTTTSCGGGEE
T ss_pred c-ccHHHHH-HHHHHhcCCCCEEEEecCCCC-cHHHHHHHcCCccEE
Confidence 3 4455444 234456889999999986532 345565556554443
No 129
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=98.14 E-value=2.7e-06 Score=89.84 Aligned_cols=95 Identities=20% Similarity=0.187 Sum_probs=71.3
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHHcCC--------------cc-cCHHHHhccCCEEEEec
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARAIGV--------------DL-VSFDEAIATADFISLHM 259 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~~g~--------------~~-~~l~ell~~aDvV~l~~ 259 (600)
..++|+|||.|.+|..+|..|...|.+|..||++.. .+...+.+. .. .++++.++.||+|++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaV 107 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVV 107 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECC
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECC
Confidence 346899999999999999999999999999998752 233333331 11 37888999999999999
Q ss_pred CCCccccccccHhHhccCCCceEEEEccCCccc
Q 007512 260 PLTPATSKVLNDETFGKMKKGVRIINVARGGVI 292 (600)
Q Consensus 260 Pl~~~t~~li~~~~l~~mk~gailvNvarg~iv 292 (600)
|. ...+.++ ++....+++++++|++..|-..
T Consensus 108 p~-~~~~~vl-~~i~~~l~~~~ivvs~~kGi~~ 138 (356)
T 3k96_A 108 PS-FAFHEVI-TRMKPLIDAKTRIAWGTKGLAK 138 (356)
T ss_dssp CH-HHHHHHH-HHHGGGCCTTCEEEECCCSCBT
T ss_pred CH-HHHHHHH-HHHHHhcCCCCEEEEEeCCCCc
Confidence 94 3444444 3445568899999999876544
No 130
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.13 E-value=2.2e-06 Score=84.06 Aligned_cols=107 Identities=16% Similarity=0.254 Sum_probs=72.6
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEE-ECCCCC-hhH-HHHcCCcc-cCHHHHhccCCEEEEecCCCccccccccHh
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIA-HDPYAP-ADR-ARAIGVDL-VSFDEAIATADFISLHMPLTPATSKVLNDE 272 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~-~d~~~~-~~~-a~~~g~~~-~~l~ell~~aDvV~l~~Pl~~~t~~li~~~ 272 (600)
-++|+|||+|.||+.+|+.|...|++|.+ ||++.. .+. +.+.|+.. .+..+.+++||+|++++|. .....++..
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~-~~~~~v~~~- 100 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPY-DSIADIVTQ- 100 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCG-GGHHHHHTT-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCCh-HHHHHHHHH-
Confidence 36899999999999999999988999998 998763 222 34456543 3556678999999999993 223333321
Q ss_pred HhccCCCceEEEEccCCcc------------ccHHHHHHhHhcCCce
Q 007512 273 TFGKMKKGVRIINVARGGV------------IDEEALVRALDSGRVA 307 (600)
Q Consensus 273 ~l~~mk~gailvNvarg~i------------vde~aL~~aL~~g~i~ 307 (600)
+.. .++.++|+++.|-- ...+.+.+.+...++.
T Consensus 101 -l~~-~~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~~vv 145 (220)
T 4huj_A 101 -VSD-WGGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVPGAKVV 145 (220)
T ss_dssp -CSC-CTTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHSTTCEEE
T ss_pred -hhc-cCCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCCCCCEE
Confidence 222 35789999986531 1355566666544443
No 131
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=98.12 E-value=1.7e-05 Score=82.41 Aligned_cols=175 Identities=14% Similarity=0.082 Sum_probs=107.4
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCCh-hHH-----------HHcCC--------------c-ccCHHHHh
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPA-DRA-----------RAIGV--------------D-LVSFDEAI 249 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~-~~a-----------~~~g~--------------~-~~~l~ell 249 (600)
-++|+|||.|.||+.+|..+...|++|..||+.... +.+ .+.|. . ..++++.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a~ 85 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhHh
Confidence 468999999999999999999999999999987521 111 11111 1 23688899
Q ss_pred ccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhc-CCceEEEEeccCCCCCCCCCccccC
Q 007512 250 ATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDS-GRVAQAALDVFTEEPPPADSKLVQH 328 (600)
Q Consensus 250 ~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~-g~i~ga~lDv~~~EP~~~~~~L~~~ 328 (600)
+.||+|+=++|-.-+.+.-+-++.=+.++++++|-...++= ....+...+.. .++ .+++-|.+-|. -||.|
T Consensus 86 ~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl--~is~ia~~~~~p~r~--ig~HffNP~~~---m~LVE- 157 (319)
T 3ado_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCL--LPSKLFTGLAHVKQC--IVAHPVNPPYY---IPLVE- 157 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSC--CHHHHHTTCTTGGGE--EEEEECSSTTT---CCEEE-
T ss_pred ccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhc--cchhhhhhccCCCcE--EEecCCCCccc---cchHH-
Confidence 99999999999877766655555555689999886554443 34555555543 344 56666654433 46765
Q ss_pred CcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCccccCCCCChhhhhccc-chHHHHHHH
Q 007512 329 ERVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGELAATAVNAPMVPAEVLTELK-PFVELAEKL 392 (600)
Q Consensus 329 ~nvilTPH~~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~~vn~~~i~~~~~~~~~-p~~~la~~l 392 (600)
+|-+|+. +.+ +++.+.++.+...-..++.....+--+.+.+. ||+..|-+|
T Consensus 158 --iv~g~~T---s~~--------~~~~~~~~~~~~gk~pv~v~kd~pGFi~NRl~~~~~~EA~~l 209 (319)
T 3ado_A 158 --LVPHPET---SPA--------TVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQYAIISEAWRL 209 (319)
T ss_dssp --EEECTTC---CHH--------HHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHH
T ss_pred --hcCCCCC---cHH--------HHHHHHHHHHHhCCccCCcCCCCCCEeHHHHHHHHHHHHHHH
Confidence 5555543 222 33444444443332222222223334455544 666666555
No 132
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.10 E-value=7.9e-06 Score=88.33 Aligned_cols=106 Identities=20% Similarity=0.213 Sum_probs=72.1
Q ss_pred ccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCcc---cCHHHH---------------hccCCEEE
Q 007512 195 LVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDL---VSFDEA---------------IATADFIS 256 (600)
Q Consensus 195 l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~---~~l~el---------------l~~aDvV~ 256 (600)
-+|.++.|||+|.+|..+|..|...|++|++||.+...-.....|... ..++++ +++||+|+
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvi 88 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFI 88 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEE
T ss_pred ccCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEE
Confidence 458899999999999999999999999999999886433333333211 133333 45799999
Q ss_pred EecCCCcccc--------ccc--cHhHhccCCCceEEEEccCCccccHHHHHHh
Q 007512 257 LHMPLTPATS--------KVL--NDETFGKMKKGVRIINVARGGVIDEEALVRA 300 (600)
Q Consensus 257 l~~Pl~~~t~--------~li--~~~~l~~mk~gailvNvarg~ivde~aL~~a 300 (600)
+|+|...... .+. -+.....|++|.++|+.+.-.+-..+.+.+.
T Consensus 89 i~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~ 142 (431)
T 3ojo_A 89 IAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKP 142 (431)
T ss_dssp ECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHH
T ss_pred EEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHH
Confidence 9999443211 122 2345667999999999987666555655544
No 133
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=98.10 E-value=7.3e-06 Score=94.20 Aligned_cols=114 Identities=17% Similarity=0.242 Sum_probs=76.8
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHH-----------HHcCC-------------cc-cCHHHHhc
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRA-----------RAIGV-------------DL-VSFDEAIA 250 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a-----------~~~g~-------------~~-~~l~ell~ 250 (600)
=++|||||+|.||..+|..+...|++|++||++.. .+.+ .+.|. .. .++ +.++
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~ 392 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFG 392 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTGG
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHHC
Confidence 35799999999999999999989999999998752 2221 11231 11 245 6789
Q ss_pred cCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhc-CCceEEEEeccC
Q 007512 251 TADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDS-GRVAQAALDVFT 315 (600)
Q Consensus 251 ~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~-g~i~ga~lDv~~ 315 (600)
+||+|+.++|...+.+.-+-.+....++++++|++.+++- ....+.+.+.. .++ .+.+.|.
T Consensus 393 ~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl--~i~~la~~~~~~~~~--ig~hf~~ 454 (715)
T 1wdk_A 393 NVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTI--SISLLAKALKRPENF--VGMHFFN 454 (715)
T ss_dssp GCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSS--CHHHHGGGCSCGGGE--EEEECCS
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCC--CHHHHHHHhcCccce--EEEEccC
Confidence 9999999999776554434344556789999997554443 23345544432 133 5666665
No 134
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=98.08 E-value=3.9e-06 Score=87.75 Aligned_cols=92 Identities=22% Similarity=0.233 Sum_probs=67.7
Q ss_pred CEEEEEecChhHHHHHHHhhcCC-------CEEEEECCCCC-----hh-HHHHc--------C------Ccc-cCHHHHh
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLG-------MHVIAHDPYAP-----AD-RARAI--------G------VDL-VSFDEAI 249 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g-------~~V~~~d~~~~-----~~-~a~~~--------g------~~~-~~l~ell 249 (600)
++|+|||+|.||..+|..|...| .+|.+||++.. .. ...+. + +.. .++++++
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQAA 88 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHHH
Confidence 58999999999999999998777 89999998764 22 22211 1 122 3678889
Q ss_pred ccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCcc
Q 007512 250 ATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGV 291 (600)
Q Consensus 250 ~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~i 291 (600)
++||+|++|+|. ..+..++ +.....+++++++|++..|-.
T Consensus 89 ~~aD~Vilav~~-~~~~~v~-~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 89 EDADILIFVVPH-QFIGKIC-DQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp TTCSEEEECCCG-GGHHHHH-HHHTTCSCTTCEEEECCCCBC
T ss_pred cCCCEEEEeCCH-HHHHHHH-HHHHhhCCCCCEEEEECCccC
Confidence 999999999994 4444444 234455789999999987643
No 135
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.07 E-value=5.1e-06 Score=91.18 Aligned_cols=105 Identities=15% Similarity=0.087 Sum_probs=72.1
Q ss_pred CEEEEEecChhHHHHHHHhhcC--CCEEEEECCCCChhHHHHc--------------------CCcc-cCHHHHhccCCE
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL--GMHVIAHDPYAPADRARAI--------------------GVDL-VSFDEAIATADF 254 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~--g~~V~~~d~~~~~~~a~~~--------------------g~~~-~~l~ell~~aDv 254 (600)
++|+|||+|.+|..+|..|... |++|++||++......... ++.. .++.+.+++||+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aDv 89 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADL 89 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCCE
Confidence 5899999999999999999865 7999999986522111111 1121 256788899999
Q ss_pred EEEecCCCcc--------------ccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhc
Q 007512 255 ISLHMPLTPA--------------TSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDS 303 (600)
Q Consensus 255 V~l~~Pl~~~--------------t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~ 303 (600)
|++|+|.... ....+ +.....+++|.+||+++.-.+-..+.+.+.+.+
T Consensus 90 vii~Vptp~~~~g~~~~~~~dl~~v~~~~-~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~ 151 (481)
T 2o3j_A 90 IFISVNTPTKMYGRGKGMAPDLKYVESVS-RTIAQYAGGPKIVVEKSTVPVKAAESIGCILRE 151 (481)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEecCCccccccccccCCCcHHHHHHHH-HHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHH
Confidence 9999984331 11111 234556899999999886554445556666665
No 136
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=98.04 E-value=1.8e-05 Score=91.10 Aligned_cols=113 Identities=13% Similarity=0.107 Sum_probs=74.9
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHH-----------cCC-------------cc-cCHHHHhcc
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARA-----------IGV-------------DL-VSFDEAIAT 251 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~-----------~g~-------------~~-~~l~ell~~ 251 (600)
++|||||+|.||..+|..+...|++|++||++.. .+.+.+ .|. .. .++ +.+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 391 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFRD 391 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGTT
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHCC
Confidence 5799999999999999999999999999998752 222211 121 11 245 57899
Q ss_pred CCEEEEecCCCccccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhc-CCceEEEEeccC
Q 007512 252 ADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDS-GRVAQAALDVFT 315 (600)
Q Consensus 252 aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~-g~i~ga~lDv~~ 315 (600)
||+|+.++|...+.+.-+-.+....++++++|++..++-. ...+.+.+.. .++ .+.+.|.
T Consensus 392 aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~--i~~la~~~~~p~~~--iG~hf~~ 452 (725)
T 2wtb_A 392 VDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTID--LNKIGERTKSQDRI--VGAHFFS 452 (725)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSC--HHHHTTTCSCTTTE--EEEEECS
T ss_pred CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCC--HHHHHHHhcCCCCE--EEecCCC
Confidence 9999999997655444333445566899999865444332 3345444432 234 5666665
No 137
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=98.03 E-value=1.3e-06 Score=92.05 Aligned_cols=91 Identities=14% Similarity=0.166 Sum_probs=67.3
Q ss_pred EEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcC--------------Ccc-cCHHHHhccCCEEEEecCCC
Q 007512 199 TLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIG--------------VDL-VSFDEAIATADFISLHMPLT 262 (600)
Q Consensus 199 tiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g--------------~~~-~~l~ell~~aDvV~l~~Pl~ 262 (600)
+|+|||+|.||..+|..|...|++|.+||+.. ..+...+.+ +.. .++++++++||+|++|+|.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~- 95 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT- 95 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCH-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCCh-
Confidence 89999999999999999998899999999875 223333322 222 3678889999999999993
Q ss_pred ccccccccHh---HhccCCC-ceEEEEccCCc
Q 007512 263 PATSKVLNDE---TFGKMKK-GVRIINVARGG 290 (600)
Q Consensus 263 ~~t~~li~~~---~l~~mk~-gailvNvarg~ 290 (600)
.....++... ....+++ +.++|++..|-
T Consensus 96 ~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi 127 (366)
T 1evy_A 96 QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGI 127 (366)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSC
T ss_pred HHHHHHHHHhHHHHHHhcCccCCEEEEECCcC
Confidence 4455554330 3344677 89999998764
No 138
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.03 E-value=7.6e-06 Score=89.61 Aligned_cols=101 Identities=17% Similarity=0.126 Sum_probs=70.6
Q ss_pred CEEEEEecChhHHHHHHHhhcC-CC-EEEEECCCCC----hhHHHHc----------------------C-CcccCHHHH
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL-GM-HVIAHDPYAP----ADRARAI----------------------G-VDLVSFDEA 248 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~-g~-~V~~~d~~~~----~~~a~~~----------------------g-~~~~~l~el 248 (600)
++|+|||+|.+|..+|..|... |+ +|++||++.. .-..... | +...+-.+.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd~ea 98 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPDFSR 98 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESCGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCcHHH
Confidence 5899999999999999999988 99 9999998875 3222222 1 122222577
Q ss_pred hccCCEEEEecCCCc--------cccccc--cHhHhccCCCceEEEEccCCccccHHHHH
Q 007512 249 IATADFISLHMPLTP--------ATSKVL--NDETFGKMKKGVRIINVARGGVIDEEALV 298 (600)
Q Consensus 249 l~~aDvV~l~~Pl~~--------~t~~li--~~~~l~~mk~gailvNvarg~ivde~aL~ 298 (600)
+++||+|++|+|... +...+. -+.....|++|.++|+.+.-.+-..+.+.
T Consensus 99 ~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~ 158 (478)
T 3g79_A 99 ISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMA 158 (478)
T ss_dssp GGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHH
T ss_pred HhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHH
Confidence 899999999999542 222222 23455669999999999865543344443
No 139
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=98.00 E-value=9.4e-06 Score=86.74 Aligned_cols=93 Identities=23% Similarity=0.300 Sum_probs=75.8
Q ss_pred eccCCEEEEEecChhHHHHHHHhhcCCCEEEEECC-------CCChhHHHHcCCcccCHHHHhccCCEEEEecCCCcccc
Q 007512 194 SLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDP-------YAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATS 266 (600)
Q Consensus 194 ~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~-------~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~ 266 (600)
-|+||||+|||+|.-|.+=|..|+.-|++|++--+ ..+...|.+.|+...+..|+.++||+|.+-+|... ..
T Consensus 34 ~lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~~~~eA~~~ADvV~~L~PD~~-q~ 112 (491)
T 3ulk_A 34 YLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQ-HS 112 (491)
T ss_dssp GGTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEEEHHHHGGGCSEEEECSCGGG-HH
T ss_pred HHcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEecCHHHHHHhCCEEEEeCChhh-HH
Confidence 48999999999999999999999999999876422 22456788999999999999999999999999543 33
Q ss_pred ccccHhHhccCCCceEEEEccCC
Q 007512 267 KVLNDETFGKMKKGVRIINVARG 289 (600)
Q Consensus 267 ~li~~~~l~~mk~gailvNvarg 289 (600)
.+. +.....||+|+.|. .+.|
T Consensus 113 ~vy-~~I~p~lk~G~~L~-faHG 133 (491)
T 3ulk_A 113 DVV-RTVQPLMKDGAALG-YSHG 133 (491)
T ss_dssp HHH-HHHGGGSCTTCEEE-ESSC
T ss_pred HHH-HHHHhhCCCCCEEE-ecCc
Confidence 444 45788899999887 4444
No 140
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=97.99 E-value=1.2e-05 Score=82.43 Aligned_cols=82 Identities=26% Similarity=0.328 Sum_probs=68.2
Q ss_pred cceeccCCEEEEEecCh-hHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCcccCHH--HHhccCCEEEEecCCCccccc
Q 007512 191 VGVSLVGKTLAVLGFGK-VGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLVSFD--EAIATADFISLHMPLTPATSK 267 (600)
Q Consensus 191 ~g~~l~gktiGIIGlG~-IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~--ell~~aDvV~l~~Pl~~~t~~ 267 (600)
.+.++.||++.|||.|. +|+.+|..|...|++|..++++.. +++ +.+++||+|+.++|. .+
T Consensus 159 ~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~------------~l~l~~~~~~ADIVI~Avg~----p~ 222 (300)
T 4a26_A 159 CGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS------------TEDMIDYLRTADIVIAAMGQ----PG 222 (300)
T ss_dssp HTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC------------HHHHHHHHHTCSEEEECSCC----TT
T ss_pred cCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC------------CchhhhhhccCCEEEECCCC----CC
Confidence 36789999999999988 699999999999999999987532 345 889999999999994 34
Q ss_pred cccHhHhccCCCceEEEEccCCcc
Q 007512 268 VLNDETFGKMKKGVRIINVARGGV 291 (600)
Q Consensus 268 li~~~~l~~mk~gailvNvarg~i 291 (600)
++..+. +|+|+++||++.-.+
T Consensus 223 ~I~~~~---vk~GavVIDvgi~~~ 243 (300)
T 4a26_A 223 YVKGEW---IKEGAAVVDVGTTPV 243 (300)
T ss_dssp CBCGGG---SCTTCEEEECCCEEE
T ss_pred CCcHHh---cCCCcEEEEEeccCC
Confidence 566654 599999999986544
No 141
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=97.99 E-value=1.5e-05 Score=81.18 Aligned_cols=82 Identities=21% Similarity=0.307 Sum_probs=68.7
Q ss_pred cceeccCCEEEEEecCh-hHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccc
Q 007512 191 VGVSLVGKTLAVLGFGK-VGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVL 269 (600)
Q Consensus 191 ~g~~l~gktiGIIGlG~-IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li 269 (600)
.+.++.||++.|||.|. +|+.+|..|...|++|..++.+. .++++.+++||+|+.++|. .+++
T Consensus 155 ~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T------------~~L~~~~~~ADIVI~Avg~----p~~I 218 (286)
T 4a5o_A 155 TGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT------------RDLADHVSRADLVVVAAGK----PGLV 218 (286)
T ss_dssp TTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC------------SCHHHHHHTCSEEEECCCC----TTCB
T ss_pred hCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC------------cCHHHHhccCCEEEECCCC----CCCC
Confidence 46789999999999987 79999999999999999987643 2588999999999999983 3457
Q ss_pred cHhHhccCCCceEEEEccCCcc
Q 007512 270 NDETFGKMKKGVRIINVARGGV 291 (600)
Q Consensus 270 ~~~~l~~mk~gailvNvarg~i 291 (600)
..++ +|||+++||++.-.+
T Consensus 219 ~~~~---vk~GavVIDvgi~~~ 237 (286)
T 4a5o_A 219 KGEW---IKEGAIVIDVGINRQ 237 (286)
T ss_dssp CGGG---SCTTCEEEECCSCSS
T ss_pred CHHH---cCCCeEEEEeccccc
Confidence 6655 499999999996543
No 142
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=97.99 E-value=5.1e-06 Score=87.98 Aligned_cols=90 Identities=16% Similarity=0.162 Sum_probs=66.4
Q ss_pred CEEEEEecChhHHHHHHHhhcCC-------CEEEEECCCCC-----hh-HHHHc--------------CCcc-cCHHHHh
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLG-------MHVIAHDPYAP-----AD-RARAI--------------GVDL-VSFDEAI 249 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g-------~~V~~~d~~~~-----~~-~a~~~--------------g~~~-~~l~ell 249 (600)
++|+|||.|.||..+|..|...| .+|.+||+... .. ...+. ++.. .++++++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea~ 101 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASVI 101 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHHH
Confidence 47999999999999999998767 89999998765 22 22221 1222 2577889
Q ss_pred ccCCEEEEecCCCccccccccHhHhc----cCCCceEEEEccCC
Q 007512 250 ATADFISLHMPLTPATSKVLNDETFG----KMKKGVRIINVARG 289 (600)
Q Consensus 250 ~~aDvV~l~~Pl~~~t~~li~~~~l~----~mk~gailvNvarg 289 (600)
++||+|++++| ......++. .... .+++++++|++..|
T Consensus 102 ~~aDvVilav~-~~~~~~vl~-~i~~~~~~~l~~~~ivvs~~~G 143 (375)
T 1yj8_A 102 NDADLLIFIVP-CQYLESVLA-SIKESESIKIASHAKAISLTKG 143 (375)
T ss_dssp TTCSEEEECCC-HHHHHHHHH-HHTC---CCCCTTCEEEECCCS
T ss_pred cCCCEEEEcCC-HHHHHHHHH-HHhhhhhccCCCCCEEEEeCCc
Confidence 99999999999 344554443 2334 57889999999876
No 143
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=97.99 E-value=1.8e-05 Score=80.65 Aligned_cols=81 Identities=17% Similarity=0.295 Sum_probs=68.1
Q ss_pred cceeccCCEEEEEecCh-hHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccc
Q 007512 191 VGVSLVGKTLAVLGFGK-VGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVL 269 (600)
Q Consensus 191 ~g~~l~gktiGIIGlG~-IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li 269 (600)
.+.++.||++.|||.|. +|+.+|..|...|++|..++++. .++++.+++||+|+.++|. .+++
T Consensus 155 ~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------~~L~~~~~~ADIVI~Avg~----p~~I 218 (285)
T 3l07_A 155 YGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT------------TDLKSHTTKADILIVAVGK----PNFI 218 (285)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SSHHHHHTTCSEEEECCCC----TTCB
T ss_pred hCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc------------hhHHHhcccCCEEEECCCC----CCCC
Confidence 46789999999999998 69999999999999999987642 2588999999999999983 3456
Q ss_pred cHhHhccCCCceEEEEccCCc
Q 007512 270 NDETFGKMKKGVRIINVARGG 290 (600)
Q Consensus 270 ~~~~l~~mk~gailvNvarg~ 290 (600)
..++ +|||+++||+|.-.
T Consensus 219 ~~~~---vk~GavVIDvgi~~ 236 (285)
T 3l07_A 219 TADM---VKEGAVVIDVGINH 236 (285)
T ss_dssp CGGG---SCTTCEEEECCCEE
T ss_pred CHHH---cCCCcEEEEecccC
Confidence 6654 59999999998654
No 144
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=97.98 E-value=5.1e-06 Score=83.84 Aligned_cols=90 Identities=16% Similarity=0.172 Sum_probs=64.7
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCCCh-hHHHHc---CC----c-ccCHHHHhccCCEEEEecCCCcccccc
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPA-DRARAI---GV----D-LVSFDEAIATADFISLHMPLTPATSKV 268 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~-~~a~~~---g~----~-~~~l~ell~~aDvV~l~~Pl~~~t~~l 268 (600)
++|+|||+|.||+.+|..|...|.+|.+||+.... +..... |. . ..+..+.++.+|+|++|+|.. .+..+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~-~~~~v 79 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAW-QVSDA 79 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGG-GHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHH-hHHHH
Confidence 47999999999999999999999999999987632 211111 21 0 123346778999999999954 45555
Q ss_pred ccHhHhccCCCceEEEEccCC
Q 007512 269 LNDETFGKMKKGVRIINVARG 289 (600)
Q Consensus 269 i~~~~l~~mk~gailvNvarg 289 (600)
+ +.....++++.++|++..|
T Consensus 80 ~-~~l~~~l~~~~~vv~~~~g 99 (291)
T 1ks9_A 80 V-KSLASTLPVTTPILLIHNG 99 (291)
T ss_dssp H-HHHHTTSCTTSCEEEECSS
T ss_pred H-HHHHhhCCCCCEEEEecCC
Confidence 4 3344568889999998665
No 145
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=97.98 E-value=1.9e-05 Score=80.10 Aligned_cols=184 Identities=20% Similarity=0.283 Sum_probs=117.7
Q ss_pred EccCCCHhHHhhhc------CCceEEEEcCCC--CCCHH-HHhccCCCceEEEEcCcccCccChhHHHhCCceeecCCCC
Q 007512 83 CAYNLSPEELCTKI------SLCDALIVRSGT--KVNRD-VFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLVVNAPTA 153 (600)
Q Consensus 83 ~~~~~~~~el~~~i------~~~d~li~~~~~--~~~~~-~l~~~~~~Lk~I~~~g~G~d~iD~~aa~~~GI~V~n~p~~ 153 (600)
+....+++|+.+.+ .++|++++..+- +++++ +++.-.| -| -+|.+-..- .|=.+.+.+ .
T Consensus 69 lp~~~s~~ell~~i~~lN~D~~v~GIlvqlPlP~~id~~~i~~~I~p-~K-------DVDG~~p~n---~g~l~~g~~-~ 136 (281)
T 2c2x_A 69 LPADISTATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDP-AK-------DADGLHPTN---LGRLVLGTP-A 136 (281)
T ss_dssp ECTTCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCG-GG-------BTTSCCHHH---HHHHHHTCC-C
T ss_pred CCCCCCHHHHHHHHHHhcCCCCCCEEEEeCCCCCCCCHHHHHhhcCc-cC-------CccCCChhh---HHHHhCCCC-C
Confidence 34456788887766 578999998643 35543 4443322 22 234332111 111222223 2
Q ss_pred ChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecChh-HHHHHHHhhcC--CCEEEEECCCC
Q 007512 154 NTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKV-GSEVARRAKGL--GMHVIAHDPYA 230 (600)
Q Consensus 154 ~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~I-G~~vA~~l~~~--g~~V~~~d~~~ 230 (600)
...++++-++-++ + ..+.++.||++.|||.|.| |+.+|+.|... |.+|..++++.
T Consensus 137 ~~PcTp~gi~~ll----~------------------~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t 194 (281)
T 2c2x_A 137 PLPCTPRGIVHLL----R------------------RYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT 194 (281)
T ss_dssp CCCHHHHHHHHHH----H------------------HTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC
T ss_pred CCCChHHHHHHHH----H------------------HcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch
Confidence 3345555544333 1 1367899999999999985 99999999988 89999997553
Q ss_pred ChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCceEEE
Q 007512 231 PADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRVAQAA 310 (600)
Q Consensus 231 ~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i~ga~ 310 (600)
.++.+.+++||+|+.+++.. +++..++ +|+|+++||+|.-.+-| | ..
T Consensus 195 ------------~~L~~~~~~ADIVI~Avg~p----~~I~~~~---vk~GavVIDVgi~r~~~----------g----lv 241 (281)
T 2c2x_A 195 ------------RDLPALTRQADIVVAAVGVA----HLLTADM---VRPGAAVIDVGVSRTDD----------G----LV 241 (281)
T ss_dssp ------------SCHHHHHTTCSEEEECSCCT----TCBCGGG---SCTTCEEEECCEEEETT----------E----EE
T ss_pred ------------hHHHHHHhhCCEEEECCCCC----cccCHHH---cCCCcEEEEccCCCCCC----------C----cc
Confidence 36889999999999999832 3577665 48999999999755432 2 33
Q ss_pred EeccCCCCCCCCCccccCCcEEEcCCCCCCcH
Q 007512 311 LDVFTEEPPPADSKLVQHERVTVTPHLGASTM 342 (600)
Q Consensus 311 lDv~~~EP~~~~~~L~~~~nvilTPH~~~~t~ 342 (600)
=||- .+ ..+...+ +||--||.-.
T Consensus 242 GDVd-~~-------v~~~a~~-iTPVPGGVGp 264 (281)
T 2c2x_A 242 GDVH-PD-------VWELAGH-VSPNPGGVGP 264 (281)
T ss_dssp ESBC-GG-------GGGTCSE-EECSSSSSHH
T ss_pred Cccc-cc-------hhhheee-ecCCCCCccH
Confidence 4664 22 2223344 7998888754
No 146
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=97.96 E-value=7.7e-06 Score=85.17 Aligned_cols=86 Identities=22% Similarity=0.295 Sum_probs=64.8
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHHcC-----------Ccc-cCHHHHhccCCEEEEecCCCc
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARAIG-----------VDL-VSFDEAIATADFISLHMPLTP 263 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~~g-----------~~~-~~l~ell~~aDvV~l~~Pl~~ 263 (600)
-.+|+|||+|.||..+|.+|...|.+|.+||+... .+...+.| +.. .++++ +..||+|++++| ..
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk-~~ 91 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIP-VQ 91 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSC-GG
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECC-HH
Confidence 45899999999999999999988999999998752 23333334 232 36778 899999999999 45
Q ss_pred cccccccHhHhccCC-CceEEEEccCC
Q 007512 264 ATSKVLNDETFGKMK-KGVRIINVARG 289 (600)
Q Consensus 264 ~t~~li~~~~l~~mk-~gailvNvarg 289 (600)
.++.++ ..++ ++.++|++..|
T Consensus 92 ~~~~v~-----~~l~~~~~~vv~~~nG 113 (335)
T 1z82_A 92 YIREHL-----LRLPVKPSMVLNLSKG 113 (335)
T ss_dssp GHHHHH-----TTCSSCCSEEEECCCC
T ss_pred HHHHHH-----HHhCcCCCEEEEEeCC
Confidence 444443 2233 78899999875
No 147
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=97.96 E-value=1.8e-05 Score=80.14 Aligned_cols=153 Identities=13% Similarity=0.147 Sum_probs=100.5
Q ss_pred EccCCCHhHHhhhc------CCceEEEEcCCC--CCCHHH-HhccCCCceEEEEcCcccCccChhHHHhCCceeecCCCC
Q 007512 83 CAYNLSPEELCTKI------SLCDALIVRSGT--KVNRDV-FESSAGRLKVVGRAGVGIDNVDLAAATEFGCLVVNAPTA 153 (600)
Q Consensus 83 ~~~~~~~~el~~~i------~~~d~li~~~~~--~~~~~~-l~~~~~~Lk~I~~~g~G~d~iD~~aa~~~GI~V~n~p~~ 153 (600)
+....+++|+.+.+ .++|++++..+- +++++. ++.-.| .--+|.+-.. ..|-.+.+.++
T Consensus 63 lp~~~s~~ell~~I~~lN~D~~v~GIlvqlPLP~~id~~~v~~~I~p--------~KDVDG~~p~---n~G~l~~g~~~- 130 (276)
T 3ngx_A 63 KYDDISMKDLLKRIDDLAKDPQINGIMIENPLPKGFDYYEIVRNIPY--------YKDVDALSPY---NQGLIALNREF- 130 (276)
T ss_dssp EESSCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTCCHHHHHTTSCG--------GGBTTCCSHH---HHHHHHTTCCS-
T ss_pred CCCCCCHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCHHHHHhhCCC--------CCcccCCCcc---chhhhhcCCCC-
Confidence 34456788887766 578999998653 355443 333221 1223333211 11112222333
Q ss_pred ChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecCh-hHHHHHHHhhcCCCEEEEECCCCCh
Q 007512 154 NTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGK-VGSEVARRAKGLGMHVIAHDPYAPA 232 (600)
Q Consensus 154 ~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~-IG~~vA~~l~~~g~~V~~~d~~~~~ 232 (600)
...+++.-++.++ + ..+ +.||++.|||.|. +|+.+|+.|...|++|..++++.
T Consensus 131 ~~PcTp~gv~~lL----~------------------~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t-- 184 (276)
T 3ngx_A 131 LVPATPRAVIDIM----D------------------YYG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT-- 184 (276)
T ss_dssp SCCHHHHHHHHHH----H------------------HHT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--
T ss_pred CCCCcHHHHHHHH----H------------------HhC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc--
Confidence 3334555444332 1 123 8999999999986 79999999999999999998642
Q ss_pred hHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCc
Q 007512 233 DRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGG 290 (600)
Q Consensus 233 ~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ 290 (600)
.++++.+++||+|+.++|. .+++..+. +|+|+++||+|.-.
T Consensus 185 ----------~~L~~~~~~ADIVI~Avg~----p~~I~~~~---vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 185 ----------KDIGSMTRSSKIVVVAVGR----PGFLNREM---VTPGSVVIDVGINY 225 (276)
T ss_dssp ----------SCHHHHHHHSSEEEECSSC----TTCBCGGG---CCTTCEEEECCCEE
T ss_pred ----------ccHHHhhccCCEEEECCCC----CccccHhh---ccCCcEEEEeccCc
Confidence 3588999999999999984 23576655 59999999998644
No 148
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=97.95 E-value=2.4e-05 Score=80.14 Aligned_cols=82 Identities=21% Similarity=0.301 Sum_probs=69.0
Q ss_pred cceeccCCEEEEEecCh-hHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccc
Q 007512 191 VGVSLVGKTLAVLGFGK-VGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVL 269 (600)
Q Consensus 191 ~g~~l~gktiGIIGlG~-IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li 269 (600)
.+.++.|+++.|||.|. +|+.+|+.|...|++|..++.+. .++.+.+++||+|+.+++. .+++
T Consensus 159 ~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------~~L~~~~~~ADIVI~Avg~----p~~I 222 (301)
T 1a4i_A 159 TGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT------------AHLDEEVNKGDILVVATGQ----PEMV 222 (301)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SSHHHHHTTCSEEEECCCC----TTCB
T ss_pred cCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc------------ccHHHHhccCCEEEECCCC----cccC
Confidence 46789999999999996 69999999999999999997542 3588999999999999984 2357
Q ss_pred cHhHhccCCCceEEEEccCCcc
Q 007512 270 NDETFGKMKKGVRIINVARGGV 291 (600)
Q Consensus 270 ~~~~l~~mk~gailvNvarg~i 291 (600)
..+. +|||+++||+|.-.+
T Consensus 223 ~~~~---vk~GavVIDVgi~~~ 241 (301)
T 1a4i_A 223 KGEW---IKPGAIVIDCGINYV 241 (301)
T ss_dssp CGGG---SCTTCEEEECCCBC-
T ss_pred CHHH---cCCCcEEEEccCCCc
Confidence 7665 489999999997654
No 149
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.95 E-value=1.3e-05 Score=79.29 Aligned_cols=95 Identities=16% Similarity=0.254 Sum_probs=69.2
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEE-EEECCCCChhHHHHcCCcccCHHHHh-ccCCEEEEecCCCccccccccHhHhc
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHV-IAHDPYAPADRARAIGVDLVSFDEAI-ATADFISLHMPLTPATSKVLNDETFG 275 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V-~~~d~~~~~~~a~~~g~~~~~l~ell-~~aDvV~l~~Pl~~~t~~li~~~~l~ 275 (600)
.+|||||+|.||+.+++.+...|+++ .+||+....+. .+.++++++ .++|+|++|+|... .. +....
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~~~~------~~~~~~~l~~~~~DvVv~~~~~~~-~~----~~~~~ 69 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGEHEK------MVRGIDEFLQREMDVAVEAASQQA-VK----DYAEK 69 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCCCTT------EESSHHHHTTSCCSEEEECSCHHH-HH----HHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcchhh------hcCCHHHHhcCCCCEEEECCCHHH-HH----HHHHH
Confidence 37999999999999999998778997 57898742211 345799999 79999999999332 22 22234
Q ss_pred cCCCceEEEEccCCccccH---HHHHHhHhc
Q 007512 276 KMKKGVRIINVARGGVIDE---EALVRALDS 303 (600)
Q Consensus 276 ~mk~gailvNvarg~ivde---~aL~~aL~~ 303 (600)
.++.|..+++...+..-+. +.|.++.++
T Consensus 70 ~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~ 100 (236)
T 2dc1_A 70 ILKAGIDLIVLSTGAFADRDFLSRVREVCRK 100 (236)
T ss_dssp HHHTTCEEEESCGGGGGSHHHHHHHHHHHHH
T ss_pred HHHCCCcEEEECcccCChHHHHHHHHHHHHh
Confidence 5788999999987766544 456555544
No 150
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=97.95 E-value=4e-06 Score=85.95 Aligned_cols=105 Identities=20% Similarity=0.179 Sum_probs=72.2
Q ss_pred CEEEEEecChhHHHHHHHhhcC-----C-CEEEEECCCCChhHHHH-cCCccc--------------CHHHHhccCCEEE
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL-----G-MHVIAHDPYAPADRARA-IGVDLV--------------SFDEAIATADFIS 256 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~-----g-~~V~~~d~~~~~~~a~~-~g~~~~--------------~l~ell~~aDvV~ 256 (600)
++|+|||+|.||+.+|..|... | .+|.+||+....+...+ .|+... +..+.+..+|+|+
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi 88 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIARGAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDYIL 88 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECCHHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEcHHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCEEE
Confidence 4899999999999999999877 8 99999998212333444 565322 2335678999999
Q ss_pred EecCCCccccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCC
Q 007512 257 LHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGR 305 (600)
Q Consensus 257 l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~ 305 (600)
+|+|... +..++ +.....++++.+||++.-| +-.++.+.+.+...+
T Consensus 89 l~vk~~~-~~~v~-~~i~~~l~~~~~iv~~~nG-~~~~~~l~~~l~~~~ 134 (317)
T 2qyt_A 89 FCTKDYD-MERGV-AEIRPMIGQNTKILPLLNG-ADIAERMRTYLPDTV 134 (317)
T ss_dssp ECCSSSC-HHHHH-HHHGGGEEEEEEEEECSCS-SSHHHHHTTTSCTTT
T ss_pred EecCccc-HHHHH-HHHHhhcCCCCEEEEccCC-CCcHHHHHHHCCCCc
Confidence 9999543 44444 2333456788999998766 222455666565443
No 151
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=97.91 E-value=1e-05 Score=73.95 Aligned_cols=101 Identities=18% Similarity=0.196 Sum_probs=74.0
Q ss_pred ccCCEEEEEec----ChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEecCCCccccccc
Q 007512 195 LVGKTLAVLGF----GKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLV-SFDEAIATADFISLHMPLTPATSKVL 269 (600)
Q Consensus 195 l~gktiGIIGl----G~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li 269 (600)
+.-++|+|||+ |++|..+++.++..|++|+.+||.... -.|+... +++++...+|++++++| .+....++
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~----i~G~~~~~s~~el~~~vDlvii~vp-~~~v~~v~ 86 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE----IEGLKCYRSVRELPKDVDVIVFVVP-PKVGLQVA 86 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE----ETTEECBSSGGGSCTTCCEEEECSC-HHHHHHHH
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCe----ECCeeecCCHHHhCCCCCEEEEEeC-HHHHHHHH
Confidence 45678999999 999999999999999999999987521 1466544 79999999999999999 56666666
Q ss_pred cHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 270 NDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 270 ~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
.+ ..+ +..++++++++. . .+++.++.++..+
T Consensus 87 ~~-~~~-~g~~~i~~~~~~---~-~~~l~~~a~~~Gi 117 (138)
T 1y81_A 87 KE-AVE-AGFKKLWFQPGA---E-SEEIRRFLEKAGV 117 (138)
T ss_dssp HH-HHH-TTCCEEEECTTS---C-CHHHHHHHHHHTC
T ss_pred HH-HHH-cCCCEEEEcCcc---H-HHHHHHHHHHCCC
Confidence 43 333 667788888743 2 4555555555433
No 152
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=97.91 E-value=8.4e-06 Score=84.57 Aligned_cols=93 Identities=20% Similarity=0.232 Sum_probs=69.9
Q ss_pred cceeccCCEEEEEecChh-HHHHHHHhhcCCCEEEEECCCCC--hhHHHHcCC---cc--------cCHHHHhccCCEEE
Q 007512 191 VGVSLVGKTLAVLGFGKV-GSEVARRAKGLGMHVIAHDPYAP--ADRARAIGV---DL--------VSFDEAIATADFIS 256 (600)
Q Consensus 191 ~g~~l~gktiGIIGlG~I-G~~vA~~l~~~g~~V~~~d~~~~--~~~a~~~g~---~~--------~~l~ell~~aDvV~ 256 (600)
.|.++.|+++.|||.|.| |+.+|+.|.+.|.+|..+|+... ...+.+.+. .. .++.+.+++||+|+
T Consensus 171 ~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVI 250 (320)
T 1edz_A 171 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVI 250 (320)
T ss_dssp TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEE
T ss_pred cCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEE
Confidence 577899999999999975 99999999999999999987521 111111111 11 35889999999999
Q ss_pred EecCCCccccccccHhHhccCCCceEEEEccCC
Q 007512 257 LHMPLTPATSKVLNDETFGKMKKGVRIINVARG 289 (600)
Q Consensus 257 l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg 289 (600)
.+++.. .-++..+. +|+|+++||+|..
T Consensus 251 sAtg~p---~~vI~~e~---vk~GavVIDVgi~ 277 (320)
T 1edz_A 251 TGVPSE---NYKFPTEY---IKEGAVCINFACT 277 (320)
T ss_dssp ECCCCT---TCCBCTTT---SCTTEEEEECSSS
T ss_pred ECCCCC---cceeCHHH---cCCCeEEEEcCCC
Confidence 999842 22366655 4899999999864
No 153
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.91 E-value=5.9e-06 Score=78.12 Aligned_cols=94 Identities=16% Similarity=0.312 Sum_probs=65.9
Q ss_pred eeccCCEEEEEecChhHHHHHHHhhcC-CCEEEEECCCCC-hhHHHHcCCccc-----C---HHHH--hccCCEEEEecC
Q 007512 193 VSLVGKTLAVLGFGKVGSEVARRAKGL-GMHVIAHDPYAP-ADRARAIGVDLV-----S---FDEA--IATADFISLHMP 260 (600)
Q Consensus 193 ~~l~gktiGIIGlG~IG~~vA~~l~~~-g~~V~~~d~~~~-~~~a~~~g~~~~-----~---l~el--l~~aDvV~l~~P 260 (600)
.++.+++++|+|+|.+|+.+|+.|+.. |++|+++|++.. .+.+.+.|+... + +.++ +.++|+|++++|
T Consensus 35 ~~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 35 INPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp BCCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence 457788999999999999999999998 999999998762 344555676432 2 3444 678999999999
Q ss_pred CCccccccccHhHhccCCCceEEEEccC
Q 007512 261 LTPATSKVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 261 l~~~t~~li~~~~l~~mk~gailvNvar 288 (600)
..+.+..++ ..+..+.++..++....
T Consensus 115 ~~~~~~~~~--~~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 115 HHQGNQTAL--EQLQRRNYKGQIAAIAE 140 (183)
T ss_dssp SHHHHHHHH--HHHHHTTCCSEEEEEES
T ss_pred ChHHHHHHH--HHHHHHCCCCEEEEEEC
Confidence 544333222 23445665656665433
No 154
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.88 E-value=2.3e-05 Score=79.46 Aligned_cols=93 Identities=20% Similarity=0.190 Sum_probs=67.6
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCCh-hHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhc
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPA-DRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFG 275 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~-~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~ 275 (600)
|+++.|+|.|.+|+.++..|...|.+|.++++.... +...+.++...+++++ .++|+|+.++|..-.....++.+.+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~~~~~l-~~~DiVInaTp~Gm~~~~~l~~~~l~ 196 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCFMEPPK-SAFDLIINATSASLHNELPLNKEVLK 196 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEESSCCS-SCCSEEEECCTTCCCCSCSSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEecHHHh-ccCCEEEEcccCCCCCCCCCChHHHH
Confidence 899999999999999999999999999999988732 2222566655556554 38999999999763222234444222
Q ss_pred -cCCCceEEEEccCCc
Q 007512 276 -KMKKGVRIINVARGG 290 (600)
Q Consensus 276 -~mk~gailvNvarg~ 290 (600)
.++++.+++|+...+
T Consensus 197 ~~l~~~~~v~D~vY~P 212 (269)
T 3phh_A 197 GYFKEGKLAYDLAYGF 212 (269)
T ss_dssp HHHHHCSEEEESCCSS
T ss_pred hhCCCCCEEEEeCCCC
Confidence 456777788877665
No 155
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=97.87 E-value=1.2e-05 Score=83.72 Aligned_cols=90 Identities=17% Similarity=0.212 Sum_probs=67.3
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCcc--------------cCHHHHhccCCEEEEecCCC
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDL--------------VSFDEAIATADFISLHMPLT 262 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~--------------~~l~ell~~aDvV~l~~Pl~ 262 (600)
.++|+|||.|.||..+|..|...|.+|.+||+....+...+.|... .++++ +..+|+|++|+|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~- 80 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA- 80 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc-
Confidence 3689999999999999999998899999999853333444555421 25665 5899999999994
Q ss_pred ccccccccHhHhccCCCceEEEEccCC
Q 007512 263 PATSKVLNDETFGKMKKGVRIINVARG 289 (600)
Q Consensus 263 ~~t~~li~~~~l~~mk~gailvNvarg 289 (600)
..+..++. .....++++++|+.+..|
T Consensus 81 ~~~~~~~~-~l~~~l~~~~~iv~~~nG 106 (335)
T 3ghy_A 81 PALESVAA-GIAPLIGPGTCVVVAMNG 106 (335)
T ss_dssp HHHHHHHG-GGSSSCCTTCEEEECCSS
T ss_pred hhHHHHHH-HHHhhCCCCCEEEEECCC
Confidence 44554442 233457889999999888
No 156
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.86 E-value=5.2e-05 Score=78.58 Aligned_cols=88 Identities=20% Similarity=0.350 Sum_probs=67.2
Q ss_pred CCEEEEEecChhHHHHHHHhhc-CC-CEEEEECCCCChhHHHH----cCCc--ccCHHHHhccCCEEEEecCCCcccccc
Q 007512 197 GKTLAVLGFGKVGSEVARRAKG-LG-MHVIAHDPYAPADRARA----IGVD--LVSFDEAIATADFISLHMPLTPATSKV 268 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~-~g-~~V~~~d~~~~~~~a~~----~g~~--~~~l~ell~~aDvV~l~~Pl~~~t~~l 268 (600)
.++++|||.|.+|+.+++.+.. ++ -+|.+||++.....+.+ .|+. ..++++++++||+|++|+|.. ..+
T Consensus 121 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~a~~la~~l~~~~g~~~~~~~~~eav~~aDIVi~aT~s~---~pv 197 (313)
T 3hdj_A 121 SSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPYASPEILERIGRRCGVPARMAAPADIAAQADIVVTATRST---TPL 197 (313)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTTCCHHHHHHHHHHHTSCEEECCHHHHHHHCSEEEECCCCS---SCS
T ss_pred CcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCcHHHHHHHHHHHhcCCeEEEeCHHHHHhhCCEEEEccCCC---Ccc
Confidence 6799999999999999999875 44 58999999832233332 3653 338999999999999999964 345
Q ss_pred ccHhHhccCCCceEEEEccCCc
Q 007512 269 LNDETFGKMKKGVRIINVARGG 290 (600)
Q Consensus 269 i~~~~l~~mk~gailvNvarg~ 290 (600)
+.. ..+|||+.++++|...
T Consensus 198 l~~---~~l~~G~~V~~vGs~~ 216 (313)
T 3hdj_A 198 FAG---QALRAGAFVGAIGSSL 216 (313)
T ss_dssp SCG---GGCCTTCEEEECCCSS
T ss_pred cCH---HHcCCCcEEEECCCCC
Confidence 553 3579999999998643
No 157
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.83 E-value=5.4e-05 Score=77.79 Aligned_cols=95 Identities=14% Similarity=0.145 Sum_probs=69.5
Q ss_pred eeccCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCCCh--hHHHHcCC---ccc---CHHHHhccCCEEEEecCCCc
Q 007512 193 VSLVGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYAPA--DRARAIGV---DLV---SFDEAIATADFISLHMPLTP 263 (600)
Q Consensus 193 ~~l~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~~~--~~a~~~g~---~~~---~l~ell~~aDvV~l~~Pl~~ 263 (600)
..+.|++++|+|.|.+|+.++..|...|+ +|.++|+.... +.+.+.+. ... ++.+.+.++|+|+.++|...
T Consensus 137 ~~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~ 216 (297)
T 2egg_A 137 ITLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGM 216 (297)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTC
T ss_pred CCCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCC
Confidence 35789999999999999999999999998 99999987522 22333343 222 45677889999999999654
Q ss_pred cc--cc-cccHhHhccCCCceEEEEccCCc
Q 007512 264 AT--SK-VLNDETFGKMKKGVRIINVARGG 290 (600)
Q Consensus 264 ~t--~~-li~~~~l~~mk~gailvNvarg~ 290 (600)
.. .. .++ ...++++.+++|+.-.+
T Consensus 217 ~~~~~~~~i~---~~~l~~~~~v~D~~y~P 243 (297)
T 2egg_A 217 HPRVEVQPLS---LERLRPGVIVSDIIYNP 243 (297)
T ss_dssp SSCCSCCSSC---CTTCCTTCEEEECCCSS
T ss_pred CCCCCCCCCC---HHHcCCCCEEEEcCCCC
Confidence 21 11 122 24578899999998754
No 158
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.83 E-value=4.3e-05 Score=63.22 Aligned_cols=69 Identities=12% Similarity=0.114 Sum_probs=54.5
Q ss_pred EEEEecCCCCChhhHHhhhhcCCccccceEeeeecCCCcEEEEEEeC--CC-CcHHHHHHHhcCCCcceEEEee
Q 007512 529 ILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVAPRKHAVMAIGVD--EQ-PRKETLKKIGDVPAIEEFVFLK 599 (600)
Q Consensus 529 Liv~~~D~pG~Ia~V~~iL~~~~INIa~m~v~R~~~g~~al~~i~~D--~~-~~~~~l~~l~~~~~v~~v~~i~ 599 (600)
+-+...|+||+++.|+++|+++|+||.++...+.. + .+.+.+.++ +. .-++++++|+++++|.++..+.
T Consensus 8 l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~-~-~~~~~i~v~~~~~~~l~~l~~~L~~~~~V~~v~~~~ 79 (88)
T 2ko1_A 8 IRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKD-G-IFTCNLMIFVKNTDKLTTLMDKLRKVQGVFTVERLS 79 (88)
T ss_dssp EEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECS-S-EEEEEEEEEESSHHHHHHHHHHHTTCTTEEEEEEEC
T ss_pred EEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcC-C-EEEEEEEEEECCHHHHHHHHHHHhcCCCceEEEEec
Confidence 45668899999999999999999999999997643 3 555555543 32 2358999999999999988764
No 159
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=97.83 E-value=4e-06 Score=85.01 Aligned_cols=85 Identities=8% Similarity=0.043 Sum_probs=55.4
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEE-EEECCCCC-hhHH-HHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHh
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHV-IAHDPYAP-ADRA-RAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETF 274 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V-~~~d~~~~-~~~a-~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l 274 (600)
++|||||+|.||+.+|+.|... ++| .+||++.. .+.. ...|....++++++++||+|++|+|... .. +.+
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~DvVilav~~~~-~~-----~v~ 75 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPDRY-IK-----TVA 75 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCTTT-HH-----HHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCCccCCHHHHHhcCCEEEEeCChHH-HH-----HHH
Confidence 4799999999999999999876 888 48998752 2222 2445522367788899999999999543 22 333
Q ss_pred ccC-CCceEEEEccCC
Q 007512 275 GKM-KKGVRIINVARG 289 (600)
Q Consensus 275 ~~m-k~gailvNvarg 289 (600)
..+ +++.+|||++-+
T Consensus 76 ~~l~~~~~ivi~~s~~ 91 (276)
T 2i76_A 76 NHLNLGDAVLVHCSGF 91 (276)
T ss_dssp TTTCCSSCCEEECCSS
T ss_pred HHhccCCCEEEECCCC
Confidence 333 688999999854
No 160
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.82 E-value=2.6e-05 Score=79.46 Aligned_cols=96 Identities=9% Similarity=0.134 Sum_probs=67.6
Q ss_pred eeccCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCCChhHHHHcCCcc---cCHHHHhccCCEEEEecCCC--cccc
Q 007512 193 VSLVGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYAPADRARAIGVDL---VSFDEAIATADFISLHMPLT--PATS 266 (600)
Q Consensus 193 ~~l~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~~~~~a~~~g~~~---~~l~ell~~aDvV~l~~Pl~--~~t~ 266 (600)
..+.||++.|+|.|.+|+.++..|...|+ +|.++++...........+.. .++.+.++++|+|+.++|.. +...
T Consensus 113 ~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~ 192 (277)
T 3don_A 113 EGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNTD 192 (277)
T ss_dssp TTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------C
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCCc
Confidence 45789999999999999999999999998 899999875322111122222 24566788999999999964 2222
Q ss_pred ccccHhHhccCCCceEEEEccCCcc
Q 007512 267 KVLNDETFGKMKKGVRIINVARGGV 291 (600)
Q Consensus 267 ~li~~~~l~~mk~gailvNvarg~i 291 (600)
..++ .+.++++.+++|+...+.
T Consensus 193 ~~l~---~~~l~~~~~V~D~vY~P~ 214 (277)
T 3don_A 193 SVIS---LNRLASHTLVSDIVYNPY 214 (277)
T ss_dssp CSSC---CTTCCSSCEEEESCCSSS
T ss_pred CCCC---HHHcCCCCEEEEecCCCC
Confidence 2232 455789999999986654
No 161
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=97.82 E-value=5.5e-05 Score=78.27 Aligned_cols=107 Identities=17% Similarity=0.146 Sum_probs=75.9
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCc---------------c-cCHHHHhccCCEEEEecCC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVD---------------L-VSFDEAIATADFISLHMPL 261 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~---------------~-~~l~ell~~aDvV~l~~Pl 261 (600)
++|+|||.|.||..+|..|...|.+|..+++.. .+...+.|+. . .+++++.+.+|+|++++|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~-~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK~ 81 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD-YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIKV 81 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT-HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh-HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecCC
Confidence 589999999999999999998899999999875 3444444421 1 2456666689999999995
Q ss_pred CccccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCceE
Q 007512 262 TPATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRVAQ 308 (600)
Q Consensus 262 ~~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i~g 308 (600)
.. +...+ +.....++++.+|+.+..|= -.++.+.+.+...++.+
T Consensus 82 ~~-~~~~l-~~l~~~l~~~t~Iv~~~nGi-~~~~~l~~~~~~~~vl~ 125 (320)
T 3i83_A 82 VE-GADRV-GLLRDAVAPDTGIVLISNGI-DIEPEVAAAFPDNEVIS 125 (320)
T ss_dssp CT-TCCHH-HHHTTSCCTTCEEEEECSSS-SCSHHHHHHSTTSCEEE
T ss_pred CC-hHHHH-HHHHhhcCCCCEEEEeCCCC-ChHHHHHHHCCCCcEEE
Confidence 54 45444 33344578889999887763 23466666666555443
No 162
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.73 E-value=3.5e-05 Score=70.94 Aligned_cols=99 Identities=17% Similarity=0.150 Sum_probs=61.6
Q ss_pred ccceeccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHH-HcCCccc-----C---HHHH-hccCCEEEEe
Q 007512 190 YVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRAR-AIGVDLV-----S---FDEA-IATADFISLH 258 (600)
Q Consensus 190 ~~g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~-~~g~~~~-----~---l~el-l~~aDvV~l~ 258 (600)
++.....+++|.|+|+|.+|+.+|+.|+..|.+|+++|++.. .+.+. ..|...+ + +.+. +..+|+|+++
T Consensus 12 ~~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~ 91 (155)
T 2g1u_A 12 HMSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAF 91 (155)
T ss_dssp -----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred hhhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEE
Confidence 356678899999999999999999999999999999998763 23333 3454321 2 2333 6789999999
Q ss_pred cCCCccccccccHhHhccCCCceEEEEccCCc
Q 007512 259 MPLTPATSKVLNDETFGKMKKGVRIINVARGG 290 (600)
Q Consensus 259 ~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ 290 (600)
+|....+. .+ ......+.+...++-..++.
T Consensus 92 ~~~~~~~~-~~-~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 92 TNDDSTNF-FI-SMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp SSCHHHHH-HH-HHHHHHTSCCSEEEEECSSG
T ss_pred eCCcHHHH-HH-HHHHHHHCCCCeEEEEECCH
Confidence 98433221 11 12233344445555554444
No 163
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=97.70 E-value=0.0001 Score=75.98 Aligned_cols=106 Identities=18% Similarity=0.205 Sum_probs=74.9
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCcc---------------cCHHHHhccCCEEEEecCCC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDL---------------VSFDEAIATADFISLHMPLT 262 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~---------------~~l~ell~~aDvV~l~~Pl~ 262 (600)
++|+|||.|.||..+|..|...|.+|..|++.. .+...+.|+.. .+.+ .+..+|+|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~-~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~-~~~~~D~vilavk~~ 80 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD-YEAIAGNGLKVFSINGDFTLPHVKGYRAPE-EIGPMDLVLVGLKTF 80 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT-HHHHHHTCEEEEETTCCEEESCCCEESCHH-HHCCCSEEEECCCGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc-HHHHHhCCCEEEcCCCeEEEeeceeecCHH-HcCCCCEEEEecCCC
Confidence 579999999999999999998899999999875 44444555421 1344 368999999999944
Q ss_pred ccccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCceE
Q 007512 263 PATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRVAQ 308 (600)
Q Consensus 263 ~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i~g 308 (600)
.+...+ +..-..++++.+||.+.-|= -.++.+.+.+...++.+
T Consensus 81 -~~~~~l-~~l~~~l~~~~~iv~l~nGi-~~~~~l~~~~~~~~v~~ 123 (312)
T 3hn2_A 81 -ANSRYE-ELIRPLVEEGTQILTLQNGL-GNEEALATLFGAERIIG 123 (312)
T ss_dssp -GGGGHH-HHHGGGCCTTCEEEECCSSS-SHHHHHHHHTCGGGEEE
T ss_pred -CcHHHH-HHHHhhcCCCCEEEEecCCC-CcHHHHHHHCCCCcEEE
Confidence 344444 23334578899999988763 23566767676555544
No 164
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=97.68 E-value=1.9e-05 Score=72.56 Aligned_cols=101 Identities=14% Similarity=0.215 Sum_probs=73.3
Q ss_pred CCEEEEEec----ChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEecCCCccccccccH
Q 007512 197 GKTLAVLGF----GKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLV-SFDEAIATADFISLHMPLTPATSKVLND 271 (600)
Q Consensus 197 gktiGIIGl----G~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~~ 271 (600)
-++|+|||+ |.+|..+++.|+..|++|+.+||....+. -.|+... +++++...+|++++++| .+....++.+
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~--i~G~~~~~sl~el~~~~Dlvii~vp-~~~v~~v~~~ 89 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKT--LLGQQGYATLADVPEKVDMVDVFRN-SEAAWGVAQE 89 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSE--ETTEECCSSTTTCSSCCSEEECCSC-STHHHHHHHH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccc--cCCeeccCCHHHcCCCCCEEEEEeC-HHHHHHHHHH
Confidence 578999999 89999999999988999999998751011 1466544 78898889999999999 4656666643
Q ss_pred hHhccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 272 ETFGKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 272 ~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
..+ ...+.++++.+ .. ++++.+++++..+
T Consensus 90 -~~~-~g~~~i~i~~~--~~--~~~l~~~a~~~Gi 118 (145)
T 2duw_A 90 -AIA-IGAKTLWLQLG--VI--NEQAAVLAREAGL 118 (145)
T ss_dssp -HHH-HTCCEEECCTT--CC--CHHHHHHHHTTTC
T ss_pred -HHH-cCCCEEEEcCC--hH--HHHHHHHHHHcCC
Confidence 333 56677888763 22 5666666766544
No 165
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.68 E-value=3.2e-05 Score=70.09 Aligned_cols=90 Identities=18% Similarity=0.315 Sum_probs=62.6
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc-----C---HHH-HhccCCEEEEecCCCcccc
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV-----S---FDE-AIATADFISLHMPLTPATS 266 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~-----~---l~e-ll~~aDvV~l~~Pl~~~t~ 266 (600)
..++.|+|+|.+|+.+|+.|+..|++|+++|++. ..+.+.+.|+..+ + +++ -+.++|+|++++|....+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~ 86 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAG 86 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHH
Confidence 3579999999999999999999999999999886 3345556676432 2 222 2578999999999655443
Q ss_pred ccccHhHhccCCCceEEEEccC
Q 007512 267 KVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 267 ~li~~~~l~~mk~gailvNvar 288 (600)
.++ ..+..+.++..+|--.+
T Consensus 87 ~~~--~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 87 EIV--ASARAKNPDIEIIARAH 106 (140)
T ss_dssp HHH--HHHHHHCSSSEEEEEES
T ss_pred HHH--HHHHHHCCCCeEEEEEC
Confidence 332 23444556666664433
No 166
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.66 E-value=0.00011 Score=77.25 Aligned_cols=90 Identities=18% Similarity=0.238 Sum_probs=66.2
Q ss_pred cCCEEEEEecChhHHHHHHHhh-cCC-CEEEEECCCCC-hh-HHHHc----CCc---ccCHHHHhccCCEEEEecCCCcc
Q 007512 196 VGKTLAVLGFGKVGSEVARRAK-GLG-MHVIAHDPYAP-AD-RARAI----GVD---LVSFDEAIATADFISLHMPLTPA 264 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~-~~g-~~V~~~d~~~~-~~-~a~~~----g~~---~~~l~ell~~aDvV~l~~Pl~~~ 264 (600)
..+++||||.|.+|+.+++.+. ..+ .+|.+||+... .+ .+... |+. ..++++++++||+|++|+|...
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~- 206 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKA- 206 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSS-
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCC-
Confidence 3679999999999999998875 344 58999998762 22 22222 532 2478999999999999999652
Q ss_pred ccccccHhHhccCCCceEEEEccCC
Q 007512 265 TSKVLNDETFGKMKKGVRIINVARG 289 (600)
Q Consensus 265 t~~li~~~~l~~mk~gailvNvarg 289 (600)
...++.. +.+++|..+++++..
T Consensus 207 ~~pvl~~---~~l~~G~~V~~vgs~ 228 (350)
T 1x7d_A 207 YATIITP---DMLEPGMHLNAVGGD 228 (350)
T ss_dssp EEEEECG---GGCCTTCEEEECSCC
T ss_pred CCceecH---HHcCCCCEEEECCCC
Confidence 2344543 457999999999864
No 167
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.66 E-value=6.1e-05 Score=75.72 Aligned_cols=100 Identities=20% Similarity=0.259 Sum_probs=71.4
Q ss_pred ccCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCCChhHHHHcC--C---cccCHHHHhccCCEEEEecCCC--cccc
Q 007512 195 LVGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYAPADRARAIG--V---DLVSFDEAIATADFISLHMPLT--PATS 266 (600)
Q Consensus 195 l~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~~~~~a~~~g--~---~~~~l~ell~~aDvV~l~~Pl~--~~t~ 266 (600)
+.| +++|||.|.+|+.++..|...|. +|.++|+.. ++++++- + .+.++.+.++++|+|+.++|.. ++ .
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~--~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~-~ 182 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI--ERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGE-E 182 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH--HHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSC-C
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH--HHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCC-C
Confidence 578 99999999999999999999998 899999864 3333321 1 2346778899999999999964 22 1
Q ss_pred ccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcC
Q 007512 267 KVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSG 304 (600)
Q Consensus 267 ~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g 304 (600)
..++.+. ++++.+++|+.-+ ...-+.++.+.|
T Consensus 183 ~~i~~~~---l~~~~~V~Divy~---~T~ll~~A~~~G 214 (253)
T 3u62_A 183 LPVSDDS---LKNLSLVYDVIYF---DTPLVVKARKLG 214 (253)
T ss_dssp CSCCHHH---HTTCSEEEECSSS---CCHHHHHHHHHT
T ss_pred CCCCHHH---hCcCCEEEEeeCC---CcHHHHHHHHCC
Confidence 2344333 5789999999887 344444444444
No 168
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=97.65 E-value=6.9e-05 Score=77.54 Aligned_cols=103 Identities=18% Similarity=0.232 Sum_probs=70.4
Q ss_pred ccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCc-------------c-cCHHHHhccCCEEEEec
Q 007512 195 LVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVD-------------L-VSFDEAIATADFISLHM 259 (600)
Q Consensus 195 l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~-------------~-~~l~ell~~aDvV~l~~ 259 (600)
...++|+|||.|.||..+|..|...|.+|..| ++. ..+...+.|.. . .++++ +..+|+|++++
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vilav 94 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGADLVLFCV 94 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCSEEEECC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEEEEc
Confidence 34678999999999999999999889999999 554 23334444431 1 23444 68999999999
Q ss_pred CCCccccccccHhHhccCCCceEEEEccCCccccHHHHHHhHh
Q 007512 260 PLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALD 302 (600)
Q Consensus 260 Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~ 302 (600)
|.. .++.++ +.....++++++|+.+..|=- .++.+.+.+.
T Consensus 95 k~~-~~~~~l-~~l~~~l~~~~~iv~~~nGi~-~~~~l~~~~~ 134 (318)
T 3hwr_A 95 KST-DTQSAA-LAMKPALAKSALVLSLQNGVE-NADTLRSLLE 134 (318)
T ss_dssp CGG-GHHHHH-HHHTTTSCTTCEEEEECSSSS-HHHHHHHHCC
T ss_pred ccc-cHHHHH-HHHHHhcCCCCEEEEeCCCCC-cHHHHHHHcC
Confidence 954 455544 233445788999999877632 2455666554
No 169
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.56 E-value=0.00013 Score=64.85 Aligned_cols=87 Identities=16% Similarity=0.195 Sum_probs=56.4
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHH-HcCCccc-----CHHH----HhccCCEEEEecCCCccc
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRAR-AIGVDLV-----SFDE----AIATADFISLHMPLTPAT 265 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~-~~g~~~~-----~l~e----ll~~aDvV~l~~Pl~~~t 265 (600)
+++|+|+|+|.+|+.+|+.|...|.+|.++|++.. .+... ..++... +.+. .+.++|+|++++|.....
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~ 83 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 83 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHH
Confidence 57899999999999999999999999999998652 22222 2355321 2222 267899999999854321
Q ss_pred cccccHhHhccCCCceEEEE
Q 007512 266 SKVLNDETFGKMKKGVRIIN 285 (600)
Q Consensus 266 ~~li~~~~l~~mk~gailvN 285 (600)
. .-......++++.+++-
T Consensus 84 ~--~~~~~~~~~~~~~ii~~ 101 (140)
T 1lss_A 84 L--MSSLLAKSYGINKTIAR 101 (140)
T ss_dssp H--HHHHHHHHTTCCCEEEE
T ss_pred H--HHHHHHHHcCCCEEEEE
Confidence 1 11223344666655543
No 170
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.53 E-value=8e-05 Score=64.16 Aligned_cols=87 Identities=18% Similarity=0.224 Sum_probs=60.7
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCC-CEEEEECCCCC-hhHHHHcCCcc--------cCHHHHhccCCEEEEecCCCccc
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLG-MHVIAHDPYAP-ADRARAIGVDL--------VSFDEAIATADFISLHMPLTPAT 265 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g-~~V~~~d~~~~-~~~a~~~g~~~--------~~l~ell~~aDvV~l~~Pl~~~t 265 (600)
.+++|+|+|.|.||+.+++.|...| .+|+++|++.. .+.....++.. .++.+++.++|+|+.++|... +
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~-~ 82 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFL-T 82 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGG-H
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchh-h
Confidence 3679999999999999999999999 89999998752 23333345432 135677889999999998432 1
Q ss_pred cccccHhHhccCCCceEEEEcc
Q 007512 266 SKVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 266 ~~li~~~~l~~mk~gailvNva 287 (600)
..++ -...+.|...++.+
T Consensus 83 ~~~~----~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 83 PIIA----KAAKAAGAHYFDLT 100 (118)
T ss_dssp HHHH----HHHHHTTCEEECCC
T ss_pred HHHH----HHHHHhCCCEEEec
Confidence 1111 11235677788775
No 171
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.49 E-value=7.2e-05 Score=79.17 Aligned_cols=90 Identities=14% Similarity=0.114 Sum_probs=61.7
Q ss_pred eeccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCc--------ccCHHHHhccCCEEEEecCCCcc
Q 007512 193 VSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVD--------LVSFDEAIATADFISLHMPLTPA 264 (600)
Q Consensus 193 ~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~--------~~~l~ell~~aDvV~l~~Pl~~~ 264 (600)
.+-++++|+|||+|.||+.+|+.|... .+|.++|++............ ..+++++++++|+|+.|+|....
T Consensus 12 ~~~~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~~ 90 (365)
T 2z2v_A 12 IEGRHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLG 90 (365)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHHH
T ss_pred ccCCCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhhh
Confidence 466899999999999999999999877 899999987532111111111 12577889999999999984321
Q ss_pred ccccccHhHhccCCCceEEEEccC
Q 007512 265 TSKVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 265 t~~li~~~~l~~mk~gailvNvar 288 (600)
. .-..+.++.|+.++|++-
T Consensus 91 -~----~v~~a~l~~G~~~vD~s~ 109 (365)
T 2z2v_A 91 -F----KSIKAAIKSKVDMVDVSF 109 (365)
T ss_dssp -H----HHHHHHHHTTCCEEECCC
T ss_pred -H----HHHHHHHHhCCeEEEccC
Confidence 1 112344678888999874
No 172
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.46 E-value=0.00023 Score=73.90 Aligned_cols=87 Identities=15% Similarity=0.121 Sum_probs=63.5
Q ss_pred cCCEEEEEecChhHHHHHHHhhc-C-CCEEEEECCCCCh-h-HHHHcC-----CcccCHHHHhccCCEEEEecCCCcccc
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKG-L-GMHVIAHDPYAPA-D-RARAIG-----VDLVSFDEAIATADFISLHMPLTPATS 266 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~-~-g~~V~~~d~~~~~-~-~a~~~g-----~~~~~l~ell~~aDvV~l~~Pl~~~t~ 266 (600)
..++++|||.|.+|+.+++.+.. + ..+|.+||++... + .+...+ +...++++++ +||+|++|+|.. .
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~~~~~~e~v-~aDvVi~aTp~~---~ 199 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEAS-RCDVLVTTTPSR---K 199 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHT-SSSEEEECCCCS---S
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEEECCHHHHh-CCCEEEEeeCCC---C
Confidence 36799999999999999999875 4 3689999987622 2 222211 2344788999 999999999954 2
Q ss_pred ccccHhHhccCCCceEEEEccCC
Q 007512 267 KVLNDETFGKMKKGVRIINVARG 289 (600)
Q Consensus 267 ~li~~~~l~~mk~gailvNvarg 289 (600)
.++.. ..+++|..+++++..
T Consensus 200 pv~~~---~~l~~G~~V~~ig~~ 219 (322)
T 1omo_A 200 PVVKA---EWVEEGTHINAIGAD 219 (322)
T ss_dssp CCBCG---GGCCTTCEEEECSCC
T ss_pred ceecH---HHcCCCeEEEECCCC
Confidence 44443 357899999998643
No 173
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.44 E-value=0.00013 Score=74.54 Aligned_cols=96 Identities=14% Similarity=0.130 Sum_probs=67.4
Q ss_pred ceeccCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCCCh--hHHHHcC----CcccCHHHHhccCCEEEEecCCCcc
Q 007512 192 GVSLVGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYAPA--DRARAIG----VDLVSFDEAIATADFISLHMPLTPA 264 (600)
Q Consensus 192 g~~l~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~~~--~~a~~~g----~~~~~l~ell~~aDvV~l~~Pl~~~ 264 (600)
+..+.|+++.|+|.|.+|+.++..|...|. +|..+++.... +.+.+.+ +...+++++..++|+|+.++|..-.
T Consensus 121 ~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~gm~ 200 (281)
T 3o8q_A 121 QVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSASLD 200 (281)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCCCC-
T ss_pred CCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcCCCC
Confidence 456889999999999999999999999996 99999987522 1222222 2344667766899999999997532
Q ss_pred cc-ccccHhHhccCCCceEEEEccCCc
Q 007512 265 TS-KVLNDETFGKMKKGVRIINVARGG 290 (600)
Q Consensus 265 t~-~li~~~~l~~mk~gailvNvarg~ 290 (600)
.. -.++. +.++++.+++|+.-.+
T Consensus 201 ~~~~~l~~---~~l~~~~~V~DlvY~P 224 (281)
T 3o8q_A 201 GELPAIDP---VIFSSRSVCYDMMYGK 224 (281)
T ss_dssp ---CSCCG---GGEEEEEEEEESCCCS
T ss_pred CCCCCCCH---HHhCcCCEEEEecCCC
Confidence 11 12332 3456788888887554
No 174
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.44 E-value=0.00021 Score=64.30 Aligned_cols=65 Identities=17% Similarity=0.158 Sum_probs=48.7
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHHcCCccc-----CH---HHH-hccCCEEEEecC
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARAIGVDLV-----SF---DEA-IATADFISLHMP 260 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~~g~~~~-----~l---~el-l~~aDvV~l~~P 260 (600)
.++++.|+|+|.+|+.+|+.|...|.+|+++|++.. .+.+.+.|+... +. +++ +.++|+|++++|
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 357899999999999999999999999999998762 334455565321 22 222 467999999988
No 175
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.39 E-value=0.0004 Score=70.19 Aligned_cols=94 Identities=14% Similarity=0.145 Sum_probs=65.1
Q ss_pred eeccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCCh--hHHHHcC----CcccCHHHHh-ccCCEEEEecCCCccc
Q 007512 193 VSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPA--DRARAIG----VDLVSFDEAI-ATADFISLHMPLTPAT 265 (600)
Q Consensus 193 ~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~--~~a~~~g----~~~~~l~ell-~~aDvV~l~~Pl~~~t 265 (600)
..+.|+++.|+|.|.+|+.+++.|...|.+|.++|+.... +.+.+.+ +...+++++. .++|+|+.++|....
T Consensus 115 ~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~- 193 (271)
T 1nyt_A 115 FIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGIS- 193 (271)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGG-
T ss_pred cCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCC-
Confidence 4577999999999999999999999999999999987522 2222322 1223444444 589999999996542
Q ss_pred ccc--ccHhHhccCCCceEEEEccCCc
Q 007512 266 SKV--LNDETFGKMKKGVRIINVARGG 290 (600)
Q Consensus 266 ~~l--i~~~~l~~mk~gailvNvarg~ 290 (600)
..+ +.. ..++++.+++|+.-..
T Consensus 194 ~~~~~i~~---~~l~~~~~v~D~~y~p 217 (271)
T 1nyt_A 194 GDIPAIPS---SLIHPGIYCYDMFYQK 217 (271)
T ss_dssp TCCCCCCG---GGCCTTCEEEESCCCS
T ss_pred CCCCCCCH---HHcCCCCEEEEeccCC
Confidence 111 222 2357888888887654
No 176
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=97.39 E-value=0.00011 Score=78.01 Aligned_cols=83 Identities=19% Similarity=0.313 Sum_probs=69.5
Q ss_pred cCCEEEEEec-ChhHHHHHHHhhcCCC---EEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccH
Q 007512 196 VGKTLAVLGF-GKVGSEVARRAKGLGM---HVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLND 271 (600)
Q Consensus 196 ~gktiGIIGl-G~IG~~vA~~l~~~g~---~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~ 271 (600)
..-++.|||. |..|...++.++++|. .|.++|.+.. ..|-. + +.++++|+|+.|+......-.++++
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~-----~~g~~---~-~~i~~aDivIn~vlig~~aP~Lvt~ 283 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKET-----SRGGP---F-DEIPQADIFINCIYLSKPIAPFTNM 283 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHH-----TTCSC---C-THHHHSSEEEECCCCCSSCCCSCCH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecccc-----ccCCc---h-hhHhhCCEEEECcCcCCCCCcccCH
Confidence 3568999999 9999999999999998 8999997531 11322 2 3466999999999987777789999
Q ss_pred hHhccC-CCceEEEEcc
Q 007512 272 ETFGKM-KKGVRIINVA 287 (600)
Q Consensus 272 ~~l~~m-k~gailvNva 287 (600)
+.++.| |||++|||++
T Consensus 284 e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 284 EKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp HHHCCTTCCCCEEEETT
T ss_pred HHHhcCcCCCeEEEEEe
Confidence 999999 9999999997
No 177
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=97.35 E-value=0.00023 Score=73.25 Aligned_cols=103 Identities=16% Similarity=0.132 Sum_probs=68.9
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCcccC----------H-HHHhccCCEEEEecCCCccc
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLVS----------F-DEAIATADFISLHMPLTPAT 265 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~~----------l-~ell~~aDvV~l~~Pl~~~t 265 (600)
++|+|||.|.||..+|..|. .|.+|..+++.. ..+...+.|+...+ . .+....+|+|++++|.. .+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~~-~~ 80 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQH-QL 80 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCGG-GH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCHH-HH
Confidence 68999999999999999999 899999999875 33444555653221 1 24567899999999943 34
Q ss_pred cccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 266 SKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 266 ~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
...+ ..+..+.++. ||.+.-|=- .++.+.+.+...++
T Consensus 81 ~~~l--~~l~~~~~~~-ivs~~nGi~-~~e~l~~~~~~~~v 117 (307)
T 3ego_A 81 QSVF--SSLERIGKTN-ILFLQNGMG-HIHDLKDWHVGHSI 117 (307)
T ss_dssp HHHH--HHTTSSCCCE-EEECCSSSH-HHHHHHTCCCSCEE
T ss_pred HHHH--HHhhcCCCCe-EEEecCCcc-HHHHHHHhCCCCcE
Confidence 4443 2334455677 888766642 24455544444444
No 178
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=97.35 E-value=0.00019 Score=76.43 Aligned_cols=87 Identities=20% Similarity=0.160 Sum_probs=60.6
Q ss_pred CEEEEEecChhHHHHHHHhhc-CCCEEEEEC---CCCC-hhHH-HHcC------------C------c-c-cCHHHHhcc
Q 007512 198 KTLAVLGFGKVGSEVARRAKG-LGMHVIAHD---PYAP-ADRA-RAIG------------V------D-L-VSFDEAIAT 251 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~-~g~~V~~~d---~~~~-~~~a-~~~g------------~------~-~-~~l~ell~~ 251 (600)
++|+|||.|.||..+|..|.. .|.+|.+|| ++.. .+.+ .+.| . . . .++++.++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISG 82 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHTT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhCC
Confidence 489999999999999999976 599999999 4321 1221 1112 1 1 1 257788999
Q ss_pred CCEEEEecCCCccccccccHhHhccCCCceEEEEc
Q 007512 252 ADFISLHMPLTPATSKVLNDETFGKMKKGVRIINV 286 (600)
Q Consensus 252 aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNv 286 (600)
||+|++++|.. ..+.++ +.....++++++|++.
T Consensus 83 aD~Vilav~~~-~~~~v~-~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 83 ADVVILTVPAF-AHEGYF-QAMAPYVQDSALIVGL 115 (404)
T ss_dssp CSEEEECSCGG-GHHHHH-HHHTTTCCTTCEEEET
T ss_pred CCEEEEeCchH-HHHHHH-HHHHhhCCCCcEEEEc
Confidence 99999999944 344443 2333457888999885
No 179
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.33 E-value=0.00012 Score=65.36 Aligned_cols=68 Identities=16% Similarity=0.338 Sum_probs=48.0
Q ss_pred ccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHHcCCcc-----cC---HHHH-hccCCEEEEecCCC
Q 007512 195 LVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARAIGVDL-----VS---FDEA-IATADFISLHMPLT 262 (600)
Q Consensus 195 l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~~g~~~-----~~---l~el-l~~aDvV~l~~Pl~ 262 (600)
+.++++.|+|.|.+|+.+++.|...|++|+++|++.. .+...+.+... .+ ++++ +.++|+|+.++|..
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN 81 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence 4578899999999999999999999999999998642 12222234321 12 2233 67899999999854
No 180
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.32 E-value=0.0011 Score=70.16 Aligned_cols=112 Identities=23% Similarity=0.243 Sum_probs=82.8
Q ss_pred cceeccCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCC----CCh----------hHHHHcCC--cccCHHHHhccCC
Q 007512 191 VGVSLVGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPY----APA----------DRARAIGV--DLVSFDEAIATAD 253 (600)
Q Consensus 191 ~g~~l~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~----~~~----------~~a~~~g~--~~~~l~ell~~aD 253 (600)
.|..+.+.+|.|+|.|..|..+|+.+.+.|. +|+.+|+. ... ..+.+.+. ...+|.+.++++|
T Consensus 186 ~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~AD 265 (388)
T 1vl6_A 186 TEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGAD 265 (388)
T ss_dssp HTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCS
T ss_pred hCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCC
Confidence 3568899999999999999999999999998 89999987 211 12222221 1347999999999
Q ss_pred EEEEecCCCccccccccHhHhccCCCceEEEEccCCcc-ccHHHHHHhHhcC-CceEEE
Q 007512 254 FISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGV-IDEEALVRALDSG-RVAQAA 310 (600)
Q Consensus 254 vV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~i-vde~aL~~aL~~g-~i~ga~ 310 (600)
+++-+.- -++++++.++.|+++++|+++++-.. +..++.+++ | .|.+.|
T Consensus 266 VlIG~Sa-----p~l~t~emVk~Ma~~pIIfalSNPt~E~~p~~a~~~---g~~i~atG 316 (388)
T 1vl6_A 266 FFIGVSR-----GNILKPEWIKKMSRKPVIFALANPVPEIDPELAREA---GAFIVATG 316 (388)
T ss_dssp EEEECSC-----SSCSCHHHHTTSCSSCEEEECCSSSCSSCHHHHHHT---TCSEEEES
T ss_pred EEEEeCC-----CCccCHHHHHhcCCCCEEEEcCCCCCCCCHHHHHHh---cCeEEEeC
Confidence 9987742 38899999999999999999996443 234444443 4 454444
No 181
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.30 E-value=0.00036 Score=65.49 Aligned_cols=73 Identities=12% Similarity=0.135 Sum_probs=60.6
Q ss_pred ccEEEEEecCCCCChhhHHhhhhcCCccccceEeeeecCCCcEEEEEEeCCC--CcHHHHHHHhcCCCcceEEEe
Q 007512 526 GSIILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVAPRKHAVMAIGVDEQ--PRKETLKKIGDVPAIEEFVFL 598 (600)
Q Consensus 526 ~~~Liv~~~D~pG~Ia~V~~iL~~~~INIa~m~v~R~~~g~~al~~i~~D~~--~~~~~l~~l~~~~~v~~v~~i 598 (600)
.|.|-+...|+||++++|+++|+++|+||.++.+......+.+.+.+.++.. .-+.+.++|.++++|.+|..+
T Consensus 3 ~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~d~~~leqI~kqL~Kl~dV~~V~r~ 77 (164)
T 2f1f_A 3 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQIEKQLHKLVDVLRVSEL 77 (164)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEG
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEeccHHHHHHHHHHHcCCCCEEEEEEc
Confidence 3678888899999999999999999999999999876555678887777644 335788899999999988754
No 182
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.28 E-value=0.00051 Score=69.70 Aligned_cols=96 Identities=10% Similarity=0.119 Sum_probs=66.0
Q ss_pred ceeccCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCCCh--hHHHHcC---CcccCHHHHh-ccCCEEEEecCCCcc
Q 007512 192 GVSLVGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYAPA--DRARAIG---VDLVSFDEAI-ATADFISLHMPLTPA 264 (600)
Q Consensus 192 g~~l~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~~~--~~a~~~g---~~~~~l~ell-~~aDvV~l~~Pl~~~ 264 (600)
+..+.||++.|+|.|.+|+.++..|...|. +|..+++.... +.+.+.+ +...+++++- .++|+|+.++|..-.
T Consensus 115 ~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm~ 194 (272)
T 3pwz_A 115 GEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASLT 194 (272)
T ss_dssp CCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGGG
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCCC
Confidence 456889999999999999999999999996 99999987522 2223333 2334555544 789999999996421
Q ss_pred cc-ccccHhHhccCCCceEEEEccCCc
Q 007512 265 TS-KVLNDETFGKMKKGVRIINVARGG 290 (600)
Q Consensus 265 t~-~li~~~~l~~mk~gailvNvarg~ 290 (600)
.. -.+.. +.++++.+++|+.-.+
T Consensus 195 ~~~~~i~~---~~l~~~~~V~DlvY~P 218 (272)
T 3pwz_A 195 ADLPPLPA---DVLGEAALAYELAYGK 218 (272)
T ss_dssp TCCCCCCG---GGGTTCSEEEESSCSC
T ss_pred CCCCCCCH---HHhCcCCEEEEeecCC
Confidence 11 12222 2356777777776543
No 183
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.26 E-value=0.00022 Score=72.19 Aligned_cols=71 Identities=14% Similarity=0.075 Sum_probs=51.4
Q ss_pred eeccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCCh--hHHHHcC----CcccCHHHHhc-cCCEEEEecCCCc
Q 007512 193 VSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPA--DRARAIG----VDLVSFDEAIA-TADFISLHMPLTP 263 (600)
Q Consensus 193 ~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~--~~a~~~g----~~~~~l~ell~-~aDvV~l~~Pl~~ 263 (600)
..+.|++++|+|.|.+|+.++..|...|.+|.++++.... +.+.+.+ +...+++++.+ ++|+|+.++|...
T Consensus 115 ~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~ 192 (272)
T 1p77_A 115 WLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGL 192 (272)
T ss_dssp CCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC--
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCC
Confidence 4678999999999999999999999999999999987522 1222221 22234555434 8999999999653
No 184
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.22 E-value=0.0004 Score=71.78 Aligned_cols=101 Identities=15% Similarity=0.160 Sum_probs=64.2
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCCChhHHH--H-------c--C--Ccc-cCHHHHhccCCEEEEecCC
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYAPADRAR--A-------I--G--VDL-VSFDEAIATADFISLHMPL 261 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~~~~~a~--~-------~--g--~~~-~~l~ell~~aDvV~l~~Pl 261 (600)
.++|+|||.|.||..+|..+...|+ +|..||+........ . . . +.. .++ +.+++||+|+++++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg~ 82 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITASI 82 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 4689999999999999999987787 999999876322111 0 0 1 222 356 778999999999952
Q ss_pred Cccccccc-----------cHh---HhccCCCceEEEEccCCccccHHHHHH
Q 007512 262 TPATSKVL-----------NDE---TFGKMKKGVRIINVARGGVIDEEALVR 299 (600)
Q Consensus 262 ~~~t~~li-----------~~~---~l~~mk~gailvNvarg~ivde~aL~~ 299 (600)
.. ..++- -++ .+....|++++++++...-+....+.+
T Consensus 83 p~-~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~~~~~~~~~ 133 (317)
T 2ewd_A 83 PG-RPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLDVMVSHFQK 133 (317)
T ss_dssp SS-CCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHH
T ss_pred CC-CCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHH
Confidence 21 11110 011 122234689999987644333444444
No 185
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=97.21 E-value=0.00087 Score=68.57 Aligned_cols=79 Identities=16% Similarity=0.250 Sum_probs=65.6
Q ss_pred cceeccCCEEEEEecCh-hHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccc
Q 007512 191 VGVSLVGKTLAVLGFGK-VGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVL 269 (600)
Q Consensus 191 ~g~~l~gktiGIIGlG~-IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li 269 (600)
.+.++.||++.|||-+. +|+.+|..|...++.|..+..+. .+|.+.+++||+|+.++.. .+++
T Consensus 173 ~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T------------~dl~~~~~~ADIvV~A~G~----p~~i 236 (303)
T 4b4u_A 173 NNIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRT------------QNLPELVKQADIIVGAVGK----AELI 236 (303)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SSHHHHHHTCSEEEECSCS----TTCB
T ss_pred HCCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCC------------CCHHHHhhcCCeEEeccCC----CCcc
Confidence 46799999999999876 59999999999999999887543 2578899999999999872 3567
Q ss_pred cHhHhccCCCceEEEEccC
Q 007512 270 NDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 270 ~~~~l~~mk~gailvNvar 288 (600)
..++ .|+|+++||+|-
T Consensus 237 ~~d~---vk~GavVIDVGi 252 (303)
T 4b4u_A 237 QKDW---IKQGAVVVDAGF 252 (303)
T ss_dssp CGGG---SCTTCEEEECCC
T ss_pred cccc---ccCCCEEEEece
Confidence 6654 599999999984
No 186
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.21 E-value=0.0004 Score=75.17 Aligned_cols=135 Identities=19% Similarity=0.194 Sum_probs=78.9
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhHHHHc--------------------C-Ccc-cCHHHHhccCCE
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAI--------------------G-VDL-VSFDEAIATADF 254 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~--------------------g-~~~-~~l~ell~~aDv 254 (600)
-++|+|||+|.+|..+|..+...|++|++||.+...-..... | ... .+.++.++.||+
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad~ 100 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATDA 100 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSSE
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCCc
Confidence 468999999999999999999899999999976422111111 2 122 257788999999
Q ss_pred EEEecCCCcccc-cccc--------HhHhccCC---CceEEEEccCCccccHHHH-HHhHhcCCceEEEEe-ccCCCCCC
Q 007512 255 ISLHMPLTPATS-KVLN--------DETFGKMK---KGVRIINVARGGVIDEEAL-VRALDSGRVAQAALD-VFTEEPPP 320 (600)
Q Consensus 255 V~l~~Pl~~~t~-~li~--------~~~l~~mk---~gailvNvarg~ivde~aL-~~aL~~g~i~ga~lD-v~~~EP~~ 320 (600)
+++|+| ||... +-.| +..-..|+ +|.++|.-+.-.+=..+.+ ...+.+.. .|.-.+ +|.+|-+.
T Consensus 101 ~~I~Vp-TP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~-~~~~f~v~~~PErl~ 178 (444)
T 3vtf_A 101 TFIAVG-TPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEA-GGVKFSVASNPEFLR 178 (444)
T ss_dssp EEECCC-CCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTT-TTCCCEEEECCCCCC
T ss_pred eEEEec-CCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhC-CCCCceeecCccccc
Confidence 999999 44222 1111 11122243 6789999886444222222 22333321 111111 24456443
Q ss_pred CC---CccccCCcEEE
Q 007512 321 AD---SKLVQHERVTV 333 (600)
Q Consensus 321 ~~---~~L~~~~nvil 333 (600)
+. +.+...+++++
T Consensus 179 eG~a~~d~~~~~riVi 194 (444)
T 3vtf_A 179 EGSALEDFFKPDRIVI 194 (444)
T ss_dssp TTSHHHHHHSCSCEEE
T ss_pred CCccccccccCCcEEE
Confidence 33 24566677753
No 187
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.18 E-value=0.00043 Score=71.20 Aligned_cols=64 Identities=19% Similarity=0.298 Sum_probs=47.6
Q ss_pred CEEEEEecChhHHHHHHHhhcCC--CEEEEECCCCCh-h-HHHHc---------CCcc--cCHHHHhccCCEEEEecCCC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLG--MHVIAHDPYAPA-D-RARAI---------GVDL--VSFDEAIATADFISLHMPLT 262 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g--~~V~~~d~~~~~-~-~a~~~---------g~~~--~~l~ell~~aDvV~l~~Pl~ 262 (600)
++|+|||.|.||..+|..|...| .+|..||+.... + .+... .+.. .++ +.+++||+|++++|..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~~ 80 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGNI 80 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCCc
Confidence 58999999999999999998667 699999987521 1 11111 1222 356 7789999999999953
No 188
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.18 E-value=0.00076 Score=69.53 Aligned_cols=63 Identities=21% Similarity=0.297 Sum_probs=47.3
Q ss_pred CEEEEEecChhHHHHHHHhhc--CCCEEEEECCCCChhHHH----HcC---------Ccc-cCHHHHhccCCEEEEecCC
Q 007512 198 KTLAVLGFGKVGSEVARRAKG--LGMHVIAHDPYAPADRAR----AIG---------VDL-VSFDEAIATADFISLHMPL 261 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~--~g~~V~~~d~~~~~~~a~----~~g---------~~~-~~l~ell~~aDvV~l~~Pl 261 (600)
++|+|||.|.+|..+|..|.. +|.+|..||+........ ... +.. .++++ +++||+|++++|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~ 79 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence 479999999999999999975 589999999876432221 111 112 35666 8999999999984
No 189
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.16 E-value=0.00045 Score=71.46 Aligned_cols=65 Identities=23% Similarity=0.401 Sum_probs=52.7
Q ss_pred CEEEEEecChhHHHHHHHhhcC-CCEEE-EECCCCCh--hHHHHcCCcccCHHHHhc--cCCEEEEecCCC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL-GMHVI-AHDPYAPA--DRARAIGVDLVSFDEAIA--TADFISLHMPLT 262 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~-g~~V~-~~d~~~~~--~~a~~~g~~~~~l~ell~--~aDvV~l~~Pl~ 262 (600)
.+|||||+|.||+..++.++.. ++++. ++|++... ..+...|+.+.+++++++ ++|+|++|+|..
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~~ 74 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCEVRTIDAIEAAADIDAVVICTPTD 74 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCEECCHHHHHHCTTCCEEEECSCGG
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCCcCCHHHHhcCCCCCEEEEeCCch
Confidence 4899999999999999999876 78887 58987632 334556777668999998 899999999943
No 190
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=97.14 E-value=0.00045 Score=64.84 Aligned_cols=73 Identities=14% Similarity=0.212 Sum_probs=60.4
Q ss_pred ccEEEEEecCCCCChhhHHhhhhcCCccccceEeeeecCCCcEEEEEEeCCC--CcHHHHHHHhcCCCcceEEEe
Q 007512 526 GSIILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVAPRKHAVMAIGVDEQ--PRKETLKKIGDVPAIEEFVFL 598 (600)
Q Consensus 526 ~~~Liv~~~D~pG~Ia~V~~iL~~~~INIa~m~v~R~~~g~~al~~i~~D~~--~~~~~l~~l~~~~~v~~v~~i 598 (600)
.|.|-+...|+||++++|++++++.|+||.++.+......+.+.|.|.++.. .-+.+.++|.++++|.+|..+
T Consensus 4 ~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~d~~~leql~kQL~Kl~dV~~V~~~ 78 (165)
T 2pc6_A 4 RHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNGPDEIVEQITKQLNKLIEVVKLIDL 78 (165)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEECHHHHHHHHHHHHHSTTEEEEEEG
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEeccHHHHHHHHHHhcCCCCEEEEEEc
Confidence 3678888899999999999999999999999999876666777776666533 445788899999999988754
No 191
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=97.11 E-value=0.00088 Score=69.34 Aligned_cols=65 Identities=15% Similarity=0.168 Sum_probs=47.0
Q ss_pred CEEEEEecChhHHHHHHHhhcCCC--EEEEECCCCCh-hH-HH--Hc------CC--cccCHHHHhccCCEEEEecCCCc
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGM--HVIAHDPYAPA-DR-AR--AI------GV--DLVSFDEAIATADFISLHMPLTP 263 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~--~V~~~d~~~~~-~~-a~--~~------g~--~~~~l~ell~~aDvV~l~~Pl~~ 263 (600)
++|+|||.|.||..+|..|...|. +|..||+.... +. +. .. .. ...+ .+.+++||+|++++|...
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~~~ 79 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGVPQ 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCCCC
Confidence 479999999999999999987787 99999987521 11 11 11 11 1224 356799999999999543
No 192
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.08 E-value=0.0013 Score=67.59 Aligned_cols=102 Identities=16% Similarity=0.165 Sum_probs=65.2
Q ss_pred CEEEEEecChhHHH-HHHHhhcC-CCEEE-EECCCCCh--hHHHHcCCcc-cCHHHHhccCCEEEEecCCCccccccccH
Q 007512 198 KTLAVLGFGKVGSE-VARRAKGL-GMHVI-AHDPYAPA--DRARAIGVDL-VSFDEAIATADFISLHMPLTPATSKVLND 271 (600)
Q Consensus 198 ktiGIIGlG~IG~~-vA~~l~~~-g~~V~-~~d~~~~~--~~a~~~g~~~-~~l~ell~~aDvV~l~~Pl~~~t~~li~~ 271 (600)
.+|||||+|.||+. +++.++.. ++++. ++|++... ..+...|+.. .+++++..++|+|++|+|.... . +
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~h-~----~ 80 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASH-F----D 80 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHH-H----H
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchhH-H----H
Confidence 48999999999997 88888764 78876 78987732 2344557653 3677776789999999994421 1 1
Q ss_pred hHhccCCCce-EEEEc-cCCccccHHHHHHhHhcC
Q 007512 272 ETFGKMKKGV-RIINV-ARGGVIDEEALVRALDSG 304 (600)
Q Consensus 272 ~~l~~mk~ga-ilvNv-arg~ivde~aL~~aL~~g 304 (600)
.....++.|. +++.- .-..+-+.+.|.++.++.
T Consensus 81 ~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~ 115 (319)
T 1tlt_A 81 VVSTLLNAGVHVCVDKPLAENLRDAERLVELAARK 115 (319)
T ss_dssp HHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 1222345554 55542 122333455666666554
No 193
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.08 E-value=0.00069 Score=69.31 Aligned_cols=65 Identities=14% Similarity=0.203 Sum_probs=51.4
Q ss_pred CCEEEEEecChhHHH-HHHHhhcC-CCEEE-EECCCCCh--hHHHHcCCc-ccCHHHHhccCCEEEEecCC
Q 007512 197 GKTLAVLGFGKVGSE-VARRAKGL-GMHVI-AHDPYAPA--DRARAIGVD-LVSFDEAIATADFISLHMPL 261 (600)
Q Consensus 197 gktiGIIGlG~IG~~-vA~~l~~~-g~~V~-~~d~~~~~--~~a~~~g~~-~~~l~ell~~aDvV~l~~Pl 261 (600)
-.+|||||+|.||+. .++.++.. ++++. ++|++... ..+.+.|+. +.++++++.++|+|++|+|.
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~ 76 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSST 76 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCG
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCc
Confidence 368999999999996 88888864 78887 58987632 234456765 45899999999999999993
No 194
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=97.08 E-value=0.0031 Score=72.51 Aligned_cols=174 Identities=17% Similarity=0.141 Sum_probs=105.2
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHH---------------cCC-------cccCHHHHhccCCE
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARA---------------IGV-------DLVSFDEAIATADF 254 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~---------------~g~-------~~~~l~ell~~aDv 254 (600)
++|||||.|.||+.+|..+...|++|+.+|+... .+.+.+ ... ...+-.+.+++||+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aDl 396 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELSTVDL 396 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGGGGSCSE
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHHHhhCCE
Confidence 6899999999999999999999999999998752 111110 000 11222345889999
Q ss_pred EEEecCCCccccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCceEEEEeccCCCCCCCCCccccCCcEEEc
Q 007512 255 ISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRVAQAALDVFTEEPPPADSKLVQHERVTVT 334 (600)
Q Consensus 255 V~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i~ga~lDv~~~EP~~~~~~L~~~~nvilT 334 (600)
|+=++|-.-+.++-+-++.=+.++++++|-...++= ....|.++++. +=.-.|++-|.+-| .-||.| ||-+
T Consensus 397 VIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSsl--~i~~ia~~~~~-p~r~ig~HFfnP~~---~m~LVE---vi~g 467 (742)
T 3zwc_A 397 VVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSAL--NVDDIASSTDR-PQLVIGTHFFSPAH---VMRLLE---VIPS 467 (742)
T ss_dssp EEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS--CHHHHHTTSSC-GGGEEEEECCSSTT---TCCEEE---EEEC
T ss_pred EEEeccccHHHHHHHHHHHhhcCCCCceEEecCCcC--ChHHHHhhcCC-ccccccccccCCCC---CCceEE---EecC
Confidence 999999887776655555555689999887655543 34455555433 22237777775432 357775 6666
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCccccCCCCChhhhhcc-cchHHHHHHH
Q 007512 335 PHLGASTMEAQEGVAIEIAEAVVGALKGELAATAVNAPMVPAEVLTEL-KPFVELAEKL 392 (600)
Q Consensus 335 PH~~~~t~ea~~~~~~~~~~~l~~~l~g~~~~~~vn~~~i~~~~~~~~-~p~~~la~~l 392 (600)
|+. +.|+. +.+.++.+...-..++- ...+--.++.+ .||+..|.+|
T Consensus 468 ~~T---s~e~~--------~~~~~~~~~lgK~pV~v-kd~pGFi~NRi~~~~~~ea~~l 514 (742)
T 3zwc_A 468 RYS---SPTTI--------ATVMSLSKKIGKIGVVV-GNCYGFVGNRMLAPYYNQGFFL 514 (742)
T ss_dssp SSC---CHHHH--------HHHHHHHHHTTCEEEEC-CCSTTTTHHHHHHHHHHHHHHH
T ss_pred CCC---CHHHH--------HHHHHHHHHhCCCCccc-CCCCCccHHHHhhHHHHHHHHH
Confidence 654 23332 33333332222111211 22334455554 4888777666
No 195
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.08 E-value=0.00049 Score=70.06 Aligned_cols=95 Identities=15% Similarity=0.207 Sum_probs=65.7
Q ss_pred eeccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCCh--hHHHHcC----------CcccCHHHHhccCCEEEEecC
Q 007512 193 VSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPA--DRARAIG----------VDLVSFDEAIATADFISLHMP 260 (600)
Q Consensus 193 ~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~--~~a~~~g----------~~~~~l~ell~~aDvV~l~~P 260 (600)
..+.||++.|+|.|.||+++|+.|...| +|+.+|+.... +.+.+.+ +...++.+.+.++|+|+.++|
T Consensus 124 ~~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag 202 (287)
T 1nvt_A 124 GRVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATP 202 (287)
T ss_dssp CCCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSC
T ss_pred CCcCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCC
Confidence 4678999999999999999999999999 99999986521 1111111 122233566788999999999
Q ss_pred CCcccc---ccccHhHhccCCCceEEEEccCCc
Q 007512 261 LTPATS---KVLNDETFGKMKKGVRIINVARGG 290 (600)
Q Consensus 261 l~~~t~---~li~~~~l~~mk~gailvNvarg~ 290 (600)
...... ..+. ..+.++++.+++|+.-..
T Consensus 203 ~~~~~~~~~~~~~--~~~~l~~~~~v~Dv~y~p 233 (287)
T 1nvt_A 203 IGMYPNIDVEPIV--KAEKLREDMVVMDLIYNP 233 (287)
T ss_dssp TTCTTCCSSCCSS--CSTTCCSSSEEEECCCSS
T ss_pred CCCCCCCCCCCCC--CHHHcCCCCEEEEeeeCC
Confidence 653210 0120 134578899999998643
No 196
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.07 E-value=0.0011 Score=68.45 Aligned_cols=63 Identities=11% Similarity=0.229 Sum_probs=48.1
Q ss_pred CEEEEEecChhHHH-HHHHhhcC-CCEEEEECCCCCh--hHHHHcCCc--ccCHHHHh-ccCCEEEEecC
Q 007512 198 KTLAVLGFGKVGSE-VARRAKGL-GMHVIAHDPYAPA--DRARAIGVD--LVSFDEAI-ATADFISLHMP 260 (600)
Q Consensus 198 ktiGIIGlG~IG~~-vA~~l~~~-g~~V~~~d~~~~~--~~a~~~g~~--~~~l~ell-~~aDvV~l~~P 260 (600)
.+|||||+|.||+. +++.++.. ++++.++|++... ..+.+.|+. +.+..+++ +++|+|++|+|
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp 72 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAA 72 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSC
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECC
Confidence 37999999999984 99988765 7888899987632 234556765 44555666 78999999999
No 197
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=97.07 E-value=0.0045 Score=63.52 Aligned_cols=126 Identities=15% Similarity=0.121 Sum_probs=87.3
Q ss_pred HhCCceeecC-CCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEec---ChhHHHHHHHh
Q 007512 141 TEFGCLVVNA-PTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGF---GKVGSEVARRA 216 (600)
Q Consensus 141 ~~~GI~V~n~-p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGl---G~IG~~vA~~l 216 (600)
...+|+|+|+ -|...-++ .+++=++.+.++ .| .+.|.+|++||= |++..+++..+
T Consensus 113 ~~~~vPVINaG~g~~~HPt--Q~LaDl~Ti~e~------------------~g-~l~gl~va~vGD~~~~rva~Sl~~~~ 171 (299)
T 1pg5_A 113 EISDIPVINAGDGKHEHPT--QAVIDIYTINKH------------------FN-TIDGLVFALLGDLKYARTVNSLLRIL 171 (299)
T ss_dssp HHCSSCEEEEEETTTBCHH--HHHHHHHHHHHH------------------HS-CSTTCEEEEEECCSSCHHHHHHHHHG
T ss_pred HhCCCCEEeCCCCCCcCcH--HHHHHHHHHHHH------------------hC-CcCCcEEEEECCCCCCchHHHHHHHH
Confidence 3457899998 55554443 334444444431 12 478999999998 59999999999
Q ss_pred hcC-CCEEEEECCCC---ChhHHHHcCCcc---cCHHHHhccCCEEEEecCCCccc-----------cccccHhHhccCC
Q 007512 217 KGL-GMHVIAHDPYA---PADRARAIGVDL---VSFDEAIATADFISLHMPLTPAT-----------SKVLNDETFGKMK 278 (600)
Q Consensus 217 ~~~-g~~V~~~d~~~---~~~~a~~~g~~~---~~l~ell~~aDvV~l~~Pl~~~t-----------~~li~~~~l~~mk 278 (600)
..+ |++|....|.. +.....+.|... .++++++++||+|..-.=..+.. ..-++.+.++.+|
T Consensus 172 ~~~~g~~v~~~~P~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~ 251 (299)
T 1pg5_A 172 TRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKERFVDEMEYEKIKGSYIVSLDLANKMK 251 (299)
T ss_dssp GGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCSTTSSCHHHHHHHGGGGSBCHHHHHTSC
T ss_pred HhCCCCEEEEECCchhcCCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCcccccccCHHHHHHhhcCcccCHHHHHhcC
Confidence 999 99999998854 222234556542 47999999999998865432110 2446777788888
Q ss_pred CceEEEEcc
Q 007512 279 KGVRIINVA 287 (600)
Q Consensus 279 ~gailvNva 287 (600)
|+++|.-|.
T Consensus 252 ~~ai~mH~l 260 (299)
T 1pg5_A 252 KDSIILHPL 260 (299)
T ss_dssp TTCEEECCS
T ss_pred CCCEEECCC
Confidence 888888876
No 198
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.03 E-value=0.00076 Score=70.45 Aligned_cols=65 Identities=8% Similarity=0.173 Sum_probs=51.6
Q ss_pred CEEEEEecChhHHHHHHHhhcC-CCEEE-EECCCCCh--hHHHHcCCc-ccCHHHHh--ccCCEEEEecCCC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL-GMHVI-AHDPYAPA--DRARAIGVD-LVSFDEAI--ATADFISLHMPLT 262 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~-g~~V~-~~d~~~~~--~~a~~~g~~-~~~l~ell--~~aDvV~l~~Pl~ 262 (600)
.+|||||+|.||+..++.++.. ++++. ++|++... ..+...|+. +.++++++ .++|+|++|+|..
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~ 77 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPND 77 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTT
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChH
Confidence 4799999999999999999977 88876 57887632 234456775 45899999 6799999999943
No 199
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.02 E-value=0.00069 Score=70.44 Aligned_cols=64 Identities=27% Similarity=0.402 Sum_probs=50.9
Q ss_pred CEEEEEecChhHHHHHHHhhcC-CCEEE-EECCCCCh--hHHHHcCCc-ccCHHHHhc--cCCEEEEecCC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL-GMHVI-AHDPYAPA--DRARAIGVD-LVSFDEAIA--TADFISLHMPL 261 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~-g~~V~-~~d~~~~~--~~a~~~g~~-~~~l~ell~--~aDvV~l~~Pl 261 (600)
.+|||||+|.||+..++.++.. ++++. ++|++... ..+.+.|+. +.++++++. ++|+|++|+|.
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~ 75 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPT 75 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCG
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCc
Confidence 4799999999999999999876 78877 58887632 234455665 358999998 89999999994
No 200
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.02 E-value=0.00075 Score=68.85 Aligned_cols=94 Identities=18% Similarity=0.160 Sum_probs=65.1
Q ss_pred eccCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCCChh--HHHHc-----CCc-----ccCHHHHhccCCEEEEecC
Q 007512 194 SLVGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYAPAD--RARAI-----GVD-----LVSFDEAIATADFISLHMP 260 (600)
Q Consensus 194 ~l~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~~~~--~a~~~-----g~~-----~~~l~ell~~aDvV~l~~P 260 (600)
.+.||++.|+|.|.+|+.++..|...|. +|..+++..... .+.+. ++. ..++++.++++|+|+.++|
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp 203 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATP 203 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSS
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCC
Confidence 5789999999999999999999999998 799999875321 12221 111 1267788899999999999
Q ss_pred CCcccc--ccccHhHhccCCCceEEEEccCCc
Q 007512 261 LTPATS--KVLNDETFGKMKKGVRIINVARGG 290 (600)
Q Consensus 261 l~~~t~--~li~~~~l~~mk~gailvNvarg~ 290 (600)
..-... -.+. ...++++.+++|+.-.+
T Consensus 204 ~Gm~~~~~~pi~---~~~l~~~~~v~DlvY~P 232 (283)
T 3jyo_A 204 MGMPAHPGTAFD---VSCLTKDHWVGDVVYMP 232 (283)
T ss_dssp TTSTTSCSCSSC---GGGCCTTCEEEECCCSS
T ss_pred CCCCCCCCCCCC---HHHhCCCCEEEEecCCC
Confidence 642111 1122 23456777777776543
No 201
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=97.01 E-value=0.00074 Score=56.24 Aligned_cols=62 Identities=18% Similarity=0.150 Sum_probs=48.0
Q ss_pred cEEEEEecCCCCChhhHHhhhhcCCccccceEeeeecCCCcEEEEEEeC--C-CCcHHHHHHHhcCC
Q 007512 527 SIILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVAPRKHAVMAIGVD--E-QPRKETLKKIGDVP 590 (600)
Q Consensus 527 ~~Liv~~~D~pG~Ia~V~~iL~~~~INIa~m~v~R~~~g~~al~~i~~D--~-~~~~~~l~~l~~~~ 590 (600)
..|.+..+|+||+++.|+++|+++|+||.+++..+.. +...+.+.++ + .--+++.++|+++.
T Consensus 6 ~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~--~~~~~~i~v~~~~~~~l~~l~~~L~~~~ 70 (91)
T 1zpv_A 6 AIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLD--EYFTMMAVVSSDEKQDFTYLRNEFEAFG 70 (91)
T ss_dssp EEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEET--TEEEEEEEEEESSCCCHHHHHHHHHHHH
T ss_pred EEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEc--CEEEEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 4567788999999999999999999999999998764 5666766663 3 22346777777654
No 202
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.00 E-value=0.0011 Score=68.30 Aligned_cols=63 Identities=16% Similarity=0.223 Sum_probs=48.6
Q ss_pred EEEEEecChhHHHH-HHHhhcCCCEEE-EECCCCCh--hHHHHcCCc--ccCHHHHhc--cCCEEEEecCC
Q 007512 199 TLAVLGFGKVGSEV-ARRAKGLGMHVI-AHDPYAPA--DRARAIGVD--LVSFDEAIA--TADFISLHMPL 261 (600)
Q Consensus 199 tiGIIGlG~IG~~v-A~~l~~~g~~V~-~~d~~~~~--~~a~~~g~~--~~~l~ell~--~aDvV~l~~Pl 261 (600)
+|||||+|.||+.+ ++.++..+++++ ++|++... ..+.+.|+. +.+++++++ ++|+|++++|.
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~ 72 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTN 72 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCG
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCCh
Confidence 79999999999998 777766778876 57887622 234556763 458999987 59999999993
No 203
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.00 E-value=0.0014 Score=66.77 Aligned_cols=93 Identities=18% Similarity=0.243 Sum_probs=62.1
Q ss_pred ceeccCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCCChhHHHHc--CCcccCHHHH--hccCCEEEEecCCC--cc
Q 007512 192 GVSLVGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYAPADRARAI--GVDLVSFDEA--IATADFISLHMPLT--PA 264 (600)
Q Consensus 192 g~~l~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~~~~~a~~~--g~~~~~l~el--l~~aDvV~l~~Pl~--~~ 264 (600)
+..+.|+++.|+|.|.+|+.++..|...|. +|..+++.. ++++++ .+...+++++ + ++|+|+.++|.. +.
T Consensus 117 ~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~--~ka~~La~~~~~~~~~~l~~l-~~DivInaTp~Gm~~~ 193 (282)
T 3fbt_A 117 RVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP--EKTSEIYGEFKVISYDELSNL-KGDVIINCTPKGMYPK 193 (282)
T ss_dssp TCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH--HHHHHHCTTSEEEEHHHHTTC-CCSEEEECSSTTSTTS
T ss_pred CCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH--HHHHHHHHhcCcccHHHHHhc-cCCEEEECCccCccCC
Confidence 456789999999999999999999999998 999998764 333332 2222233322 4 899999999963 21
Q ss_pred cc-ccccHhHhccCCCceEEEEccCCc
Q 007512 265 TS-KVLNDETFGKMKKGVRIINVARGG 290 (600)
Q Consensus 265 t~-~li~~~~l~~mk~gailvNvarg~ 290 (600)
.. -.++.+. ++++.+++|+.-.+
T Consensus 194 ~~~~pi~~~~---l~~~~~v~DlvY~P 217 (282)
T 3fbt_A 194 EGESPVDKEV---VAKFSSAVDLIYNP 217 (282)
T ss_dssp TTCCSSCHHH---HTTCSEEEESCCSS
T ss_pred CccCCCCHHH---cCCCCEEEEEeeCC
Confidence 11 1133332 45667777776433
No 204
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.00 E-value=0.00067 Score=70.89 Aligned_cols=63 Identities=21% Similarity=0.292 Sum_probs=50.7
Q ss_pred CEEEEEecChhHHHHHHHhhcC--CCEEE-EECCCCCh--hHHHHcCCcc-cCHHHHhc--cCCEEEEecC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL--GMHVI-AHDPYAPA--DRARAIGVDL-VSFDEAIA--TADFISLHMP 260 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~--g~~V~-~~d~~~~~--~~a~~~g~~~-~~l~ell~--~aDvV~l~~P 260 (600)
.+|||||+|.||+..++.++.. +++++ ++|++... ..+.+.|+.. .+++++++ ++|+|++|+|
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp 84 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTP 84 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSC
T ss_pred ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCC
Confidence 5899999999999999999876 78876 68887632 2345567753 48999997 7999999999
No 205
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=96.98 E-value=0.00086 Score=69.75 Aligned_cols=64 Identities=19% Similarity=0.279 Sum_probs=51.1
Q ss_pred CEEEEEecChhHHHHHHHhhcC-CCEEE-EECCCCCh--hHHHHcCCc--ccCHHHHhc--cCCEEEEecCC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL-GMHVI-AHDPYAPA--DRARAIGVD--LVSFDEAIA--TADFISLHMPL 261 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~-g~~V~-~~d~~~~~--~~a~~~g~~--~~~l~ell~--~aDvV~l~~Pl 261 (600)
.+|||||+|.||+..++.++.. ++++. ++|++... ..+...|+. +.+++++++ ++|+|++|+|.
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 74 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSST 74 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCC
Confidence 4799999999999999999875 78887 47987622 334556764 458999998 89999999994
No 206
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=96.97 E-value=0.0013 Score=67.81 Aligned_cols=63 Identities=13% Similarity=0.172 Sum_probs=48.5
Q ss_pred EEEEEecChhHHHHHHHhhcC-CCEEE-EECCCCCh--hHHHHcCC-c-ccCHHHHh-ccCCEEEEecCC
Q 007512 199 TLAVLGFGKVGSEVARRAKGL-GMHVI-AHDPYAPA--DRARAIGV-D-LVSFDEAI-ATADFISLHMPL 261 (600)
Q Consensus 199 tiGIIGlG~IG~~vA~~l~~~-g~~V~-~~d~~~~~--~~a~~~g~-~-~~~l~ell-~~aDvV~l~~Pl 261 (600)
+|||||+|.||+.+++.++.. ++++. ++|++... ..+...|. . +.++++++ +++|+|++|+|.
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~ 72 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPN 72 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCG
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCCh
Confidence 799999999999999999866 67775 67877522 22334454 3 35899999 789999999993
No 207
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=96.95 E-value=0.009 Score=61.32 Aligned_cols=132 Identities=18% Similarity=0.128 Sum_probs=90.3
Q ss_pred hCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEec-ChhHHHHHHHhhcCC
Q 007512 142 EFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGF-GKVGSEVARRAKGLG 220 (600)
Q Consensus 142 ~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGl-G~IG~~vA~~l~~~g 220 (600)
..+|+|+|+-+.+.-++ .+++=++.+.+++ | .+.|.+|+++|= +++..+.+..+..+|
T Consensus 120 ~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~------------------g-~l~gl~ia~vGD~~rva~Sl~~~~~~~g 178 (301)
T 2ef0_A 120 HAKVPVVNALSDRAHPL--QALADLLTLKEVF------------------G-GLAGLEVAWVGDGNNVLNSLLEVAPLAG 178 (301)
T ss_dssp HCSSCEEEEECSSCCHH--HHHHHHHHHHHHH------------------S-CCTTCEEEEESCCCHHHHHHHHHHHHHT
T ss_pred HCCCCEEeCCCCccCch--HHHHHHHHHHHHh------------------C-CcCCcEEEEECCCchhHHHHHHHHHHcC
Confidence 34688999766554444 3444444444411 2 478999999997 899999999999999
Q ss_pred CEEEEECCCC--Ch-hHHHHcCCc-ccCHHHHhccCCEEEEecCCC------cc------ccccccHhHhccCCCceEEE
Q 007512 221 MHVIAHDPYA--PA-DRARAIGVD-LVSFDEAIATADFISLHMPLT------PA------TSKVLNDETFGKMKKGVRII 284 (600)
Q Consensus 221 ~~V~~~d~~~--~~-~~a~~~g~~-~~~l~ell~~aDvV~l~~Pl~------~~------t~~li~~~~l~~mk~gailv 284 (600)
++|....|.. +. +......+. ..++++.+++||+|..-.=.. .. ...-++.+.++.+||+++|.
T Consensus 179 ~~v~~~~P~~~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~~~smg~~~~~~~~~~~~~~y~v~~e~l~~a~~~ai~m 258 (301)
T 2ef0_A 179 LKVRVATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAEREKRLRDFQGFQVNGELLKLLRPEGVFL 258 (301)
T ss_dssp CEEEEECCTTCCCCHHHHHHHTCEEESCHHHHHTTCSEEEECCCC--------CHHHHHTTTCCBCHHHHTTSCTTCEEE
T ss_pred CEEEEECCchhcCCHHHHhhceeEEECCHHHHhcCCCEEEecCcccCCcccchhHHHHHhhccccCHHHHHhcCCCcEEE
Confidence 9999998864 22 222222354 348999999999998833200 01 12456888999999999999
Q ss_pred Ecc---CCccccH
Q 007512 285 NVA---RGGVIDE 294 (600)
Q Consensus 285 Nva---rg~ivde 294 (600)
-|. ||.=|+.
T Consensus 259 HplP~~Rg~EI~~ 271 (301)
T 2ef0_A 259 HCLPAHYGEETTE 271 (301)
T ss_dssp ECSCCCBTTTBCH
T ss_pred CCCCCCCCCccCH
Confidence 997 5654443
No 208
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=96.94 E-value=0.00092 Score=70.14 Aligned_cols=64 Identities=23% Similarity=0.388 Sum_probs=51.3
Q ss_pred CEEEEEecChhHHHHHHHhhcC-CCEEEE-ECCCCC-hhHHHHcCCcc-cCHHHHhc--cCCEEEEecCC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL-GMHVIA-HDPYAP-ADRARAIGVDL-VSFDEAIA--TADFISLHMPL 261 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~-g~~V~~-~d~~~~-~~~a~~~g~~~-~~l~ell~--~aDvV~l~~Pl 261 (600)
.+|||||+|.||+..++.++.. ++++.+ +|++.. .+.+...|+.. .+++++++ +.|+|++|+|.
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~ 75 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPN 75 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCG
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCc
Confidence 4799999999999999999876 788875 688762 33455567754 48999997 79999999993
No 209
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=96.92 E-value=0.00012 Score=74.75 Aligned_cols=93 Identities=18% Similarity=0.092 Sum_probs=63.3
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHHcCCc---c-cCHHHHh-ccCCEEEEecCCCccccccccH
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARAIGVD---L-VSFDEAI-ATADFISLHMPLTPATSKVLND 271 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~~g~~---~-~~l~ell-~~aDvV~l~~Pl~~~t~~li~~ 271 (600)
++|+|||.|.||..+|..|...|.+|..+++... .+.....|.. . .+..+.+ ..+|+|++++|.. .+...+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~-~~~~~l~- 80 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTH-QLDAVIP- 80 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGG-GHHHHGG-
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCcc-CHHHHHH-
Confidence 5899999999999999999987889999988742 1111122321 1 1333444 8899999999944 3454442
Q ss_pred hHhccCCCceEEEEccCCccc
Q 007512 272 ETFGKMKKGVRIINVARGGVI 292 (600)
Q Consensus 272 ~~l~~mk~gailvNvarg~iv 292 (600)
..-..++++.+||.+.-|=-.
T Consensus 81 ~l~~~l~~~~~iv~~~nGi~~ 101 (294)
T 3g17_A 81 HLTYLAHEDTLIILAQNGYGQ 101 (294)
T ss_dssp GHHHHEEEEEEEEECCSSCCC
T ss_pred HHHHhhCCCCEEEEeccCccc
Confidence 222346788899999876443
No 210
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.91 E-value=0.00082 Score=61.42 Aligned_cols=67 Identities=12% Similarity=0.081 Sum_probs=48.7
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCCh--hHH---HHcCCccc--------CHHHH-hccCCEEEEecCCC
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPA--DRA---RAIGVDLV--------SFDEA-IATADFISLHMPLT 262 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~--~~a---~~~g~~~~--------~l~el-l~~aDvV~l~~Pl~ 262 (600)
.+++.|+|+|.+|+.+++.|...|.+|.++|++... +.. ...|+... .++++ +.+||+|+++++..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence 568999999999999999999999999999986411 111 12344321 24444 78899999999854
Q ss_pred c
Q 007512 263 P 263 (600)
Q Consensus 263 ~ 263 (600)
+
T Consensus 83 ~ 83 (153)
T 1id1_A 83 A 83 (153)
T ss_dssp H
T ss_pred H
Confidence 3
No 211
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.91 E-value=0.0025 Score=66.00 Aligned_cols=97 Identities=13% Similarity=0.196 Sum_probs=66.2
Q ss_pred ceeccCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCCC-hhHHHH--------cCC--ccc---C---HHHHhccCC
Q 007512 192 GVSLVGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYAP-ADRARA--------IGV--DLV---S---FDEAIATAD 253 (600)
Q Consensus 192 g~~l~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~~-~~~a~~--------~g~--~~~---~---l~ell~~aD 253 (600)
+..+.||++.|+|.|.+|+.++..|...|. +|..+++... .+++.+ .+. ... + +.+.+.++|
T Consensus 149 ~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aD 228 (315)
T 3tnl_A 149 GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESV 228 (315)
T ss_dssp TCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCS
T ss_pred CCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCC
Confidence 457889999999999999999999999998 8999988732 232221 121 111 2 456678999
Q ss_pred EEEEecCCCc--cc-cccccHhHhccCCCceEEEEccCCc
Q 007512 254 FISLHMPLTP--AT-SKVLNDETFGKMKKGVRIINVARGG 290 (600)
Q Consensus 254 vV~l~~Pl~~--~t-~~li~~~~l~~mk~gailvNvarg~ 290 (600)
+|+.++|..- .. ...+. ....++++.+++|+.-.+
T Consensus 229 iIINaTp~Gm~~~~~~~p~~--~~~~l~~~~~V~DlvY~P 266 (315)
T 3tnl_A 229 IFTNATGVGMKPFEGETLLP--SADMLRPELIVSDVVYKP 266 (315)
T ss_dssp EEEECSSTTSTTSTTCCSCC--CGGGCCTTCEEEESCCSS
T ss_pred EEEECccCCCCCCCCCCCCC--cHHHcCCCCEEEEeccCC
Confidence 9999999642 11 11121 223467888888887544
No 212
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=96.90 E-value=0.017 Score=59.51 Aligned_cols=125 Identities=20% Similarity=0.205 Sum_probs=86.7
Q ss_pred hCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecC--hhHHHHHHHhhcC
Q 007512 142 EFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFG--KVGSEVARRAKGL 219 (600)
Q Consensus 142 ~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG--~IG~~vA~~l~~~ 219 (600)
..+|+|+|+-+...-++ .+++=++.+.+++ | .+.|.+|++||=| ++..+.+..+..+
T Consensus 114 ~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~------------------g-~l~gl~va~vGD~~~rva~Sl~~~~~~~ 172 (307)
T 2i6u_A 114 VATVPVINALSDEFHPC--QVLADLQTIAERK------------------G-ALRGLRLSYFGDGANNMAHSLLLGGVTA 172 (307)
T ss_dssp HCSSCEEESCCSSCCHH--HHHHHHHHHHHHH------------------S-CCTTCEEEEESCTTSHHHHHHHHHHHHT
T ss_pred hCCCCEEcCCCCCcCcc--HHHHHHHHHHHHh------------------C-CcCCeEEEEECCCCcCcHHHHHHHHHHC
Confidence 34689999876555444 3444444444411 2 4789999999996 9999999999999
Q ss_pred CCEEEEECCCC--Chh-H---H----HHcCCc---ccCHHHHhccCCEEEEecCC-------Ccc-----ccccccHhHh
Q 007512 220 GMHVIAHDPYA--PAD-R---A----RAIGVD---LVSFDEAIATADFISLHMPL-------TPA-----TSKVLNDETF 274 (600)
Q Consensus 220 g~~V~~~d~~~--~~~-~---a----~~~g~~---~~~l~ell~~aDvV~l~~Pl-------~~~-----t~~li~~~~l 274 (600)
|++|....|.. +.+ . + .+.|.. ..++++.+++||+|..-.=. .++ ...-++.+.+
T Consensus 173 g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~~~l 252 (307)
T 2i6u_A 173 GIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTWTSMGQENDGLDRVKPFRPFQLNSRLL 252 (307)
T ss_dssp TCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCTTSCCCSSGGGGGGCBCHHHH
T ss_pred CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEecceecCCcccchHHHHHHHhhcCCCHHHH
Confidence 99999998854 221 1 2 255643 34899999999999983320 011 1245688888
Q ss_pred ccCCCceEEEEcc
Q 007512 275 GKMKKGVRIINVA 287 (600)
Q Consensus 275 ~~mk~gailvNva 287 (600)
+.+||+++|.-|.
T Consensus 253 ~~a~~~ai~mH~l 265 (307)
T 2i6u_A 253 ALADSDAIVLHCL 265 (307)
T ss_dssp HHSCTTCEEEECS
T ss_pred hhcCCCcEEECCC
Confidence 8888899988886
No 213
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=96.88 E-value=0.00098 Score=69.02 Aligned_cols=63 Identities=11% Similarity=0.112 Sum_probs=50.8
Q ss_pred CEEEEEecChhHHHHHHHhhcC-CCEEE-EECCCCCh--hHHHHcCCc--ccCHHHHhc--cCCEEEEecC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL-GMHVI-AHDPYAPA--DRARAIGVD--LVSFDEAIA--TADFISLHMP 260 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~-g~~V~-~~d~~~~~--~~a~~~g~~--~~~l~ell~--~aDvV~l~~P 260 (600)
.+|||||+|.||+..++.++.. ++++. ++|++... ..+...|+. +.++++++. ++|+|++|+|
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp 76 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTY 76 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCC
T ss_pred EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCC
Confidence 5899999999999999999875 78887 57887632 334556763 458999997 8999999999
No 214
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=96.86 E-value=0.0014 Score=67.44 Aligned_cols=98 Identities=12% Similarity=0.177 Sum_probs=59.6
Q ss_pred CEEEEEecChhHHHHHHHhhcC-CCEEE-EECCCCChhHHHHcCCcc---cCHHHHhccCCEEEEecCCCccccccccHh
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL-GMHVI-AHDPYAPADRARAIGVDL---VSFDEAIATADFISLHMPLTPATSKVLNDE 272 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~-g~~V~-~~d~~~~~~~a~~~g~~~---~~l~ell~~aDvV~l~~Pl~~~t~~li~~~ 272 (600)
.+|||||+|+||+.+++.++.. ++++. ++|++... +...|+.+ .++.+. .++|+|++|+|.... . +.
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~--~~~~g~~~~~~~~l~~~-~~~DvViiatp~~~h-~----~~ 81 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAE--VPFELQPFRVVSDIEQL-ESVDVALVCSPSREV-E----RT 81 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC---------CCTTSCEESSGGGS-SSCCEEEECSCHHHH-H----HH
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHH--HHHcCCCcCCHHHHHhC-CCCCEEEECCCchhh-H----HH
Confidence 4899999999999999999864 78988 48887532 22256543 244444 789999999993321 1 22
Q ss_pred HhccCCCceEEEEccC--Ccc-ccHHHHHHhHhc
Q 007512 273 TFGKMKKGVRIINVAR--GGV-IDEEALVRALDS 303 (600)
Q Consensus 273 ~l~~mk~gailvNvar--g~i-vde~aL~~aL~~ 303 (600)
....++.|.-+++..- +.. .+...|.++.++
T Consensus 82 ~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~ 115 (304)
T 3bio_A 82 ALEILKKGICTADSFDIHDGILALRRSLGDAAGK 115 (304)
T ss_dssp HHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHh
Confidence 2234566777776532 212 223455555554
No 215
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.86 E-value=0.0022 Score=61.48 Aligned_cols=73 Identities=14% Similarity=0.247 Sum_probs=60.5
Q ss_pred ccEEEEEecCCCCChhhHHhhhhcCCccccceEeeeecCCCcEEEEEEeC--CCCcHHHHHHHhcCCCcceEEEe
Q 007512 526 GSIILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVAPRKHAVMAIGVD--EQPRKETLKKIGDVPAIEEFVFL 598 (600)
Q Consensus 526 ~~~Liv~~~D~pG~Ia~V~~iL~~~~INIa~m~v~R~~~g~~al~~i~~D--~~~~~~~l~~l~~~~~v~~v~~i 598 (600)
.+.|-+...|+||++++|+.++++.|+||.++.++.....+..-|.|.++ +..-+.+.++|.++..|.+|..+
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~e~~ieqL~kQL~KLidVikV~dl 103 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGDDKTIEQIEKQAYKLVEVVKVTPI 103 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEECTTHHHHHHHHHTTSTTEEEEEEC
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECCHHHHHHHHHHhcCcCceEEEEEe
Confidence 47888888999999999999999999999999999776666676655554 55666888899998888887754
No 216
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=96.84 E-value=0.0023 Score=66.25 Aligned_cols=64 Identities=22% Similarity=0.403 Sum_probs=49.4
Q ss_pred CEEEEEecChhHHHHHHHhh-cC-CCEEE-EECCCCCh--hHHHHcCCc--ccCHHHHhc--cCCEEEEecCC
Q 007512 198 KTLAVLGFGKVGSEVARRAK-GL-GMHVI-AHDPYAPA--DRARAIGVD--LVSFDEAIA--TADFISLHMPL 261 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~-~~-g~~V~-~~d~~~~~--~~a~~~g~~--~~~l~ell~--~aDvV~l~~Pl 261 (600)
.+|||||+|.||+..++.++ .. +++++ ++|++... ..+.+.|+. +.++++++. ++|+|++|+|.
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~ 81 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPT 81 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCG
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCh
Confidence 48999999999999999988 54 78865 57987632 223445763 358999986 69999999994
No 217
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=96.81 E-value=0.0018 Score=68.66 Aligned_cols=122 Identities=20% Similarity=0.178 Sum_probs=89.8
Q ss_pred CceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecChhHHHHHHHhhcCCC-E
Q 007512 144 GCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGM-H 222 (600)
Q Consensus 144 GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~IG~~vA~~l~~~g~-~ 222 (600)
.|.|.|+ --..+|--+++-++..+| ..|..+...+|.|+|.|..|..+|+.+.+.|. +
T Consensus 156 ~ipvf~D---DiqGTa~V~lAall~al~------------------l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~ 214 (398)
T 2a9f_A 156 HIPVFHD---DQHGTAIVVLAAIFNSLK------------------LLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATK 214 (398)
T ss_dssp SSCEEEH---HHHHHHHHHHHHHHHHHH------------------TTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCE
T ss_pred Ccceecc---hhhhHHHHHHHHHHHHHH------------------HhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCe
Confidence 5888883 222344455555555555 35678999999999999999999999999999 9
Q ss_pred EEEECCCC--C-----------hhHHHHcCC--cccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCceEEEEcc
Q 007512 223 VIAHDPYA--P-----------ADRARAIGV--DLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 223 V~~~d~~~--~-----------~~~a~~~g~--~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNva 287 (600)
|+.+|.+. . ...+..... ...+|.|.++.+|+++=+- +-+++.++.++.|+++++|+.++
T Consensus 215 I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~IG~S-----apgl~T~EmVk~Ma~~pIIfals 289 (398)
T 2a9f_A 215 VTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIFIGVS-----APGVLKAEWISKMAARPVIFAMA 289 (398)
T ss_dssp EEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSEEECC-----STTCCCHHHHHTSCSSCEEEECC
T ss_pred EEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCEEEecC-----CCCCCCHHHHHhhCCCCEEEECC
Confidence 99998762 0 011222111 1336999999999987652 35889999999999999999999
Q ss_pred CCcc
Q 007512 288 RGGV 291 (600)
Q Consensus 288 rg~i 291 (600)
.-..
T Consensus 290 NPt~ 293 (398)
T 2a9f_A 290 NPIP 293 (398)
T ss_dssp SSSC
T ss_pred CCCc
Confidence 7543
No 218
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=96.78 E-value=0.0011 Score=68.47 Aligned_cols=66 Identities=17% Similarity=0.189 Sum_probs=46.8
Q ss_pred CCEEEEEecChhHHHHHHHhhcCC--CEEEEECCCCChhHHHHcC----Cc-------c-cCHHHHhccCCEEEEecCCC
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLG--MHVIAHDPYAPADRARAIG----VD-------L-VSFDEAIATADFISLHMPLT 262 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g--~~V~~~d~~~~~~~a~~~g----~~-------~-~~l~ell~~aDvV~l~~Pl~ 262 (600)
-++|+|||.|.||.++|..++..| -+|..||.......+...+ .. . .+..+.+++||+|++++|..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~~ 85 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGAN 85 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCCC
Confidence 368999999999999999997545 4899999875322221111 11 0 13456799999999998854
No 219
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=96.77 E-value=0.0026 Score=58.06 Aligned_cols=99 Identities=13% Similarity=0.126 Sum_probs=68.8
Q ss_pred CCEEEEEec----ChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEecCCCccccccccH
Q 007512 197 GKTLAVLGF----GKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLV-SFDEAIATADFISLHMPLTPATSKVLND 271 (600)
Q Consensus 197 gktiGIIGl----G~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~~ 271 (600)
-++|+|||. |++|..+++.|+..|++|+..+|... + -.|+... +++++....|++++++|. +....++.+
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~-~---i~G~~~y~sl~~l~~~vDlvvi~vp~-~~~~~vv~~ 96 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYE-E---VLGRKCYPSVLDIPDKIEVVDLFVKP-KLTMEYVEQ 96 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS-E---ETTEECBSSGGGCSSCCSEEEECSCH-HHHHHHHHH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCC-e---ECCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHHHH
Confidence 689999999 79999999999999999888887642 1 1366544 799988899999999994 555555532
Q ss_pred hHhccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 272 ETFGKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 272 ~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
..+ ...+++++.. |. .++++.+..++..+
T Consensus 97 -~~~-~gi~~i~~~~--g~--~~~~l~~~a~~~Gi 125 (144)
T 2d59_A 97 -AIK-KGAKVVWFQY--NT--YNREASKKADEAGL 125 (144)
T ss_dssp -HHH-HTCSEEEECT--TC--CCHHHHHHHHHTTC
T ss_pred -HHH-cCCCEEEECC--Cc--hHHHHHHHHHHcCC
Confidence 222 3334566553 32 25556666665433
No 220
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.77 E-value=0.0027 Score=66.11 Aligned_cols=67 Identities=19% Similarity=0.285 Sum_probs=49.9
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCCChhHH--H-------HcC----Ccc-cCHHHHhccCCEEEEec--
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYAPADRA--R-------AIG----VDL-VSFDEAIATADFISLHM-- 259 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~~~~~a--~-------~~g----~~~-~~l~ell~~aDvV~l~~-- 259 (600)
.++|+|||.|.+|..+|..|...|+ +|..||........ . ..+ +.. .++++.+++||+|++++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g~ 88 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAGL 88 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccCC
Confidence 3589999999999999999987776 89999987632111 1 011 112 47888899999999999
Q ss_pred CCCc
Q 007512 260 PLTP 263 (600)
Q Consensus 260 Pl~~ 263 (600)
|..+
T Consensus 89 p~~~ 92 (331)
T 1pzg_A 89 TKVP 92 (331)
T ss_dssp SSCT
T ss_pred CCCC
Confidence 6443
No 221
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=96.76 E-value=0.0022 Score=58.20 Aligned_cols=58 Identities=16% Similarity=0.207 Sum_probs=45.8
Q ss_pred cEEEEEecCCCCChhhHHhhhhcCCccccceEeeeecCCCcEEEEEEeCCCCcHHHHHHHhc
Q 007512 527 SIILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVAPRKHAVMAIGVDEQPRKETLKKIGD 588 (600)
Q Consensus 527 ~~Liv~~~D~pG~Ia~V~~iL~~~~INIa~m~v~R~~~g~~al~~i~~D~~~~~~~l~~l~~ 588 (600)
+.+.+..+|+||+++++.+.|+++||||.+|...+ .++.+.++++++ -.+.+.+.|++
T Consensus 73 svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~--~~~~~~~~i~~~--d~~~A~~~L~~ 130 (144)
T 2f06_A 73 DVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFA--NNNVANVVIRPS--NMDKCIEVLKE 130 (144)
T ss_dssp EEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEE--ETTEEEEEEEES--CHHHHHHHHHH
T ss_pred eEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEc--cCCcEEEEEEeC--CHHHHHHHHHH
Confidence 34556789999999999999999999999988875 456788888886 33556666655
No 222
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=96.74 E-value=0.0017 Score=66.68 Aligned_cols=63 Identities=22% Similarity=0.212 Sum_probs=45.0
Q ss_pred CEEEEEecChhHHHHHHHhhcCCC--EEEEECCCCChhH--HHHc--C------Ccc--cCHHHHhccCCEEEEecCC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGM--HVIAHDPYAPADR--ARAI--G------VDL--VSFDEAIATADFISLHMPL 261 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~--~V~~~d~~~~~~~--a~~~--g------~~~--~~l~ell~~aDvV~l~~Pl 261 (600)
++|+|||.|.+|..+|..+...|+ +|..||....... +.+. + ... .+ .+.+++||+|+++++.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~-~~a~~~aDvVIi~~~~ 77 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGG-HSELADAQVVILTAGA 77 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEEC-GGGGTTCSEEEECC--
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECC-HHHhCCCCEEEEcCCC
Confidence 489999999999999999988788 9999998752111 2211 1 111 23 3578999999999963
No 223
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=96.74 E-value=0.016 Score=59.97 Aligned_cols=131 Identities=19% Similarity=0.255 Sum_probs=89.1
Q ss_pred hCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecC--hhHHHHHHHhhcC
Q 007512 142 EFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFG--KVGSEVARRAKGL 219 (600)
Q Consensus 142 ~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG--~IG~~vA~~l~~~ 219 (600)
..+|+|+|+-+...-++ .+++=++.+.++ .| .+.|.+|+++|=| ++..+.+..+..|
T Consensus 133 ~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~------------------~g-~l~gl~va~vGD~~~rva~Sl~~~~~~~ 191 (325)
T 1vlv_A 133 YSGVPVYNGLTDEFHPT--QALADLMTIEEN------------------FG-RLKGVKVVFMGDTRNNVATSLMIACAKM 191 (325)
T ss_dssp HHCSCEEESCCSSCCHH--HHHHHHHHHHHH------------------HS-CSTTCEEEEESCTTSHHHHHHHHHHHHT
T ss_pred hCCCCEEeCCCCCCCcH--HHHHHHHHHHHH------------------hC-CcCCcEEEEECCCCcCcHHHHHHHHHHC
Confidence 34689999766544443 334444444431 12 4789999999996 9999999999999
Q ss_pred CCEEEEECCCC---ChhH---H----HHcCCc---ccCHHHHhccCCEEEEecCC-------Ccc-----ccccccHhHh
Q 007512 220 GMHVIAHDPYA---PADR---A----RAIGVD---LVSFDEAIATADFISLHMPL-------TPA-----TSKVLNDETF 274 (600)
Q Consensus 220 g~~V~~~d~~~---~~~~---a----~~~g~~---~~~l~ell~~aDvV~l~~Pl-------~~~-----t~~li~~~~l 274 (600)
|++|....|.. +.+. + .+.|.. ..++++++++||+|..-.=. .++ ...-++.+.+
T Consensus 192 G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~~w~smg~~~~~~~~~~~~~~y~v~~ell 271 (325)
T 1vlv_A 192 GMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDVWASMGEEDKEKERMALLKPYQVNERVM 271 (325)
T ss_dssp TCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECCCC----------CHHHHGGGCBCHHHH
T ss_pred CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEeccccccccccchHhHHHHHhhcCCCHHHH
Confidence 99999988753 2211 2 255643 34899999999999883321 011 1245688888
Q ss_pred ccC-CCceEEEEcc---CCcccc
Q 007512 275 GKM-KKGVRIINVA---RGGVID 293 (600)
Q Consensus 275 ~~m-k~gailvNva---rg~ivd 293 (600)
+.+ ||+++|.-|. ||.=|+
T Consensus 272 ~~a~k~dai~mH~LP~~Rg~EI~ 294 (325)
T 1vlv_A 272 EMTGKSETIFMHCLPAVKGQEVT 294 (325)
T ss_dssp HTTCCTTCEEEECSCCCBTTTBC
T ss_pred HhccCCCeEEECCCCCCCCcccC
Confidence 888 9999999986 454443
No 224
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=96.72 E-value=0.0078 Score=61.99 Aligned_cols=94 Identities=16% Similarity=0.199 Sum_probs=69.7
Q ss_pred eccCCEEEEEecC---hhHHHHHHHhhcCCCEEEEECCCC--Ch----hHHHHcCCcc---cCHHHHhccCCEEEEecCC
Q 007512 194 SLVGKTLAVLGFG---KVGSEVARRAKGLGMHVIAHDPYA--PA----DRARAIGVDL---VSFDEAIATADFISLHMPL 261 (600)
Q Consensus 194 ~l~gktiGIIGlG---~IG~~vA~~l~~~g~~V~~~d~~~--~~----~~a~~~g~~~---~~l~ell~~aDvV~l~~Pl 261 (600)
.+.|.+|++||=| ++..+++..+..+|++|....|.. +. +.+++.|... .++++++++||+|..-.=.
T Consensus 152 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q 231 (308)
T 1ml4_A 152 RIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQ 231 (308)
T ss_dssp CSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCC
T ss_pred CCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCcc
Confidence 4789999999984 899999999999999999988753 22 2234446542 4899999999999885421
Q ss_pred Cc------cc-----cccccHhHhccCCCceEEEEcc
Q 007512 262 TP------AT-----SKVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 262 ~~------~t-----~~li~~~~l~~mk~gailvNva 287 (600)
.+ +- ..-++.+.++.+||+++|.-|.
T Consensus 232 ~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 268 (308)
T 1ml4_A 232 KERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPL 268 (308)
T ss_dssp GGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCS
T ss_pred ccccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECCC
Confidence 11 00 2446777888888888888886
No 225
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=96.71 E-value=0.02 Score=59.17 Aligned_cols=125 Identities=17% Similarity=0.177 Sum_probs=86.3
Q ss_pred hCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEec-ChhHHHHHHHhhcCC
Q 007512 142 EFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGF-GKVGSEVARRAKGLG 220 (600)
Q Consensus 142 ~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGl-G~IG~~vA~~l~~~g 220 (600)
..+|+|+|+-+...-++ .+++=++.+.++ .| .+.|.+|++||= +++..+++..+..+|
T Consensus 121 ~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~------------------~g-~l~gl~va~vGD~~rva~Sl~~~~~~~g 179 (315)
T 1pvv_A 121 YATVPVINGLSDFSHPC--QALADYMTIWEK------------------KG-TIKGVKVVYVGDGNNVAHSLMIAGTKLG 179 (315)
T ss_dssp HCSSCEEEEECSSCCHH--HHHHHHHHHHHH------------------HS-CCTTCEEEEESCCCHHHHHHHHHHHHTT
T ss_pred hCCCCEEcCCCCCCCcH--HHHHHHHHHHHH------------------hC-CcCCcEEEEECCCcchHHHHHHHHHHCC
Confidence 34688888765544443 334444444431 12 478999999997 899999999999999
Q ss_pred CEEEEECCCC--Chh-H---H----HHcCCc---ccCHHHHhccCCEEEEecCC-------Ccc-----ccccccHhHhc
Q 007512 221 MHVIAHDPYA--PAD-R---A----RAIGVD---LVSFDEAIATADFISLHMPL-------TPA-----TSKVLNDETFG 275 (600)
Q Consensus 221 ~~V~~~d~~~--~~~-~---a----~~~g~~---~~~l~ell~~aDvV~l~~Pl-------~~~-----t~~li~~~~l~ 275 (600)
++|....|.. +.+ . + ++.|.. ..++++.+++||+|..-.=. .++ ...-++.+.++
T Consensus 180 ~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~ell~ 259 (315)
T 1pvv_A 180 ADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVWASMGQEAEAEERRKIFRPFQVNKDLVK 259 (315)
T ss_dssp CEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCCCSSTTSSSSHHHHHHGGGCBCHHHHH
T ss_pred CEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEcceeccCcccchHHHHHHHHhcCCCHHHHh
Confidence 9999988754 221 1 2 255643 34899999999999884321 011 12456888888
Q ss_pred cCCCceEEEEcc
Q 007512 276 KMKKGVRIINVA 287 (600)
Q Consensus 276 ~mk~gailvNva 287 (600)
.+||+++|.-|.
T Consensus 260 ~a~~~ai~mH~l 271 (315)
T 1pvv_A 260 HAKPDYMFMHCL 271 (315)
T ss_dssp TSCTTCEEEECS
T ss_pred hcCCCcEEECCC
Confidence 899999999986
No 226
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=96.71 E-value=0.0075 Score=61.94 Aligned_cols=124 Identities=21% Similarity=0.267 Sum_probs=82.9
Q ss_pred HhCCceeecCC-CCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecC---hhHHHHHHHh
Q 007512 141 TEFGCLVVNAP-TANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFG---KVGSEVARRA 216 (600)
Q Consensus 141 ~~~GI~V~n~p-~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG---~IG~~vA~~l 216 (600)
...+|+|+|+- |...-++ .+++=++.+.++ .| .+.|.+|++||=| ++..+.+..+
T Consensus 111 ~~~~vPVINagdg~~~HPt--QaLaDl~Ti~e~------------------~g-~l~glkva~vGD~~~~rva~Sl~~~~ 169 (304)
T 3r7f_A 111 SQVNIPILNAGDGCGQHPT--QSLLDLMTIYEE------------------FN-TFKGLTVSIHGDIKHSRVARSNAEVL 169 (304)
T ss_dssp HHCSSCEEESCCTTSCCHH--HHHHHHHHHHHH------------------HS-CCTTCEEEEESCCTTCHHHHHHHHHH
T ss_pred HhCCCCEEeCCCCCCcCcH--HHHHHHHHHHHH------------------hC-CCCCCEEEEEcCCCCcchHHHHHHHH
Confidence 34678999985 4444333 333333333331 12 4789999999975 6999999999
Q ss_pred hcCCCEEEEECCCC-ChhHHHHcCCcccCHHHHhccCCEEEEecCCCcc-----------ccccccHhHhccCCCceEEE
Q 007512 217 KGLGMHVIAHDPYA-PADRARAIGVDLVSFDEAIATADFISLHMPLTPA-----------TSKVLNDETFGKMKKGVRII 284 (600)
Q Consensus 217 ~~~g~~V~~~d~~~-~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~-----------t~~li~~~~l~~mk~gailv 284 (600)
..+|++|....|.. .++. ...| ...++++++++||+|..-.--.+. ...-++.+.++.+|++++|.
T Consensus 170 ~~~G~~v~~~~P~~~~~~~-~~~g-~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~m 247 (304)
T 3r7f_A 170 TRLGARVLFSGPSEWQDEE-NTFG-TYVSMDEAVESSDVVMLLRIQNERHQSAVSQEGYLNKYGLTVERAERMKRHAIIM 247 (304)
T ss_dssp HHTTCEEEEESCGGGSCTT-CSSC-EECCHHHHHHHCSEEEECCCCTTTCCSSCCSTTHHHHHSBCHHHHTTSCTTCEEE
T ss_pred HHcCCEEEEECCCccCcch-hhcC-ccCCHHHHhCCCCEEEeccchhhccccchhHHHHhCCCccCHHHHhhcCCCCEEE
Confidence 99999999988753 2211 1223 345899999999999884311110 12336778888888888888
Q ss_pred Ecc
Q 007512 285 NVA 287 (600)
Q Consensus 285 Nva 287 (600)
-|.
T Consensus 248 Hcl 250 (304)
T 3r7f_A 248 HPA 250 (304)
T ss_dssp CCS
T ss_pred CCC
Confidence 885
No 227
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=96.68 E-value=0.002 Score=66.96 Aligned_cols=63 Identities=21% Similarity=0.268 Sum_probs=49.5
Q ss_pred CEEEEEecChhHHHHHHHhh-cC-CCEEE-EECCCCCh--hHHHHcC--Cc-ccCHHHHhcc--CCEEEEecC
Q 007512 198 KTLAVLGFGKVGSEVARRAK-GL-GMHVI-AHDPYAPA--DRARAIG--VD-LVSFDEAIAT--ADFISLHMP 260 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~-~~-g~~V~-~~d~~~~~--~~a~~~g--~~-~~~l~ell~~--aDvV~l~~P 260 (600)
.+|||||+|.||+..++.++ .. ++++. ++|++... ..+.+.| .. +.++++++++ +|+|++|+|
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp 75 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSW 75 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSC
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCC
Confidence 47999999999999999998 54 78877 57887632 3345567 33 4589999976 999999999
No 228
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=96.67 E-value=0.0017 Score=67.16 Aligned_cols=64 Identities=13% Similarity=0.081 Sum_probs=48.7
Q ss_pred CEEEEEecChhHHHHHHHhhcC-CCEEE-EECCCCC--hhHHHHcCCc--ccCHHHHhc--cCCEEEEecCC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL-GMHVI-AHDPYAP--ADRARAIGVD--LVSFDEAIA--TADFISLHMPL 261 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~-g~~V~-~~d~~~~--~~~a~~~g~~--~~~l~ell~--~aDvV~l~~Pl 261 (600)
.++||||+|.||+..++.++.. ++++. ++|++.. ...+.+.|+. +.++++++. ++|+|++|+|.
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 77 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATIN 77 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCG
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCc
Confidence 4899999999999999998855 67766 4688763 2334556764 458999998 79999999993
No 229
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=96.66 E-value=0.013 Score=61.04 Aligned_cols=127 Identities=20% Similarity=0.179 Sum_probs=87.7
Q ss_pred HhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecC--hhHHHHHHHhhc
Q 007512 141 TEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFG--KVGSEVARRAKG 218 (600)
Q Consensus 141 ~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG--~IG~~vA~~l~~ 218 (600)
...+|+|+|+-+...-++ .+++=++.+.++ .|..+.|.+|+++|=| ++..+++..+..
T Consensus 119 ~~s~vPVINa~~~~~HPt--Q~LaDl~Ti~e~------------------~g~~l~gl~va~vGD~~~~va~Sl~~~~~~ 178 (335)
T 1dxh_A 119 KFAGVPVFNGLTDEYHPT--QMLADVLTMREH------------------SDKPLHDISYAYLGDARNNMGNSLLLIGAK 178 (335)
T ss_dssp HHSSSCEEEEECSSCCHH--HHHHHHHHHHHT------------------CSSCGGGCEEEEESCCSSHHHHHHHHHHHH
T ss_pred HhCCCCEEcCCCCCCCcH--HHHHHHHHHHHH------------------cCCCcCCeEEEEecCCccchHHHHHHHHHH
Confidence 345789999766544443 334444444331 2325889999999996 999999999999
Q ss_pred CCCEEEEECCCC---ChhH-------HHHcCCc---ccCHHHHhccCCEEEEecCC--C------cc-----ccccccHh
Q 007512 219 LGMHVIAHDPYA---PADR-------ARAIGVD---LVSFDEAIATADFISLHMPL--T------PA-----TSKVLNDE 272 (600)
Q Consensus 219 ~g~~V~~~d~~~---~~~~-------a~~~g~~---~~~l~ell~~aDvV~l~~Pl--~------~~-----t~~li~~~ 272 (600)
+|++|....|.. +.+. +++.|.. ..++++.+++||+|..-.=. . .+ ...-++.+
T Consensus 179 ~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~~~e~~~er~~~~~~y~v~~~ 258 (335)
T 1dxh_A 179 LGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMGEPVEAWGERIKELLPYQVNME 258 (335)
T ss_dssp TTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCSCSSSCGGGCHHHHHHHGGGCBCHH
T ss_pred cCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEeCCccccCccchhhHHHHHHhhcceeCHH
Confidence 999999988754 2211 2255643 34899999999999883321 1 00 12456888
Q ss_pred HhccC-CCceEEEEcc
Q 007512 273 TFGKM-KKGVRIINVA 287 (600)
Q Consensus 273 ~l~~m-k~gailvNva 287 (600)
.++.+ ||+++|.-|.
T Consensus 259 ll~~a~~~~ai~mHcL 274 (335)
T 1dxh_A 259 IMKATGNPRAKFMHCL 274 (335)
T ss_dssp HHHTTCCSSCEEEECS
T ss_pred HHHhccCCCeEEECCC
Confidence 88888 9999999986
No 230
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=96.66 E-value=0.003 Score=57.43 Aligned_cols=100 Identities=21% Similarity=0.319 Sum_probs=68.4
Q ss_pred cCCEEEEEec----ChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEecCCCcccccccc
Q 007512 196 VGKTLAVLGF----GKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLV-SFDEAIATADFISLHMPLTPATSKVLN 270 (600)
Q Consensus 196 ~gktiGIIGl----G~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~~t~~li~ 270 (600)
.-++|+|||. |++|..+++.++..|++|+..+|..... .-.|+... +++++-...|++++++|. +....+++
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~--~i~G~~~~~sl~el~~~vDlavi~vp~-~~~~~v~~ 88 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGE--ELFGEEAVASLLDLKEPVDILDVFRPP-SALMDHLP 88 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTS--EETTEECBSSGGGCCSCCSEEEECSCH-HHHTTTHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccC--cCCCEEecCCHHHCCCCCCEEEEEeCH-HHHHHHHH
Confidence 3578999999 8999999999999999988888762111 11366544 799988899999999995 55666664
Q ss_pred HhHhccCCCceEEEEccCCccccHHHHHHhHhcC
Q 007512 271 DETFGKMKKGVRIINVARGGVIDEEALVRALDSG 304 (600)
Q Consensus 271 ~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g 304 (600)
+ ..+ ...+.++++.+- . ++++.+..++.
T Consensus 89 ~-~~~-~gi~~i~~~~g~---~-~~~~~~~a~~~ 116 (140)
T 1iuk_A 89 E-VLA-LRPGLVWLQSGI---R-HPEFEKALKEA 116 (140)
T ss_dssp H-HHH-HCCSCEEECTTC---C-CHHHHHHHHHT
T ss_pred H-HHH-cCCCEEEEcCCc---C-HHHHHHHHHHc
Confidence 3 333 333456665432 2 35555555554
No 231
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=96.63 E-value=0.0016 Score=68.08 Aligned_cols=65 Identities=9% Similarity=0.082 Sum_probs=50.6
Q ss_pred cCCEEEEEecChhHH-HHHHHhhcC-CCEEE-EECCCCC--hhHHHHcCCcc-cCHHHHhc--cCCEEEEecC
Q 007512 196 VGKTLAVLGFGKVGS-EVARRAKGL-GMHVI-AHDPYAP--ADRARAIGVDL-VSFDEAIA--TADFISLHMP 260 (600)
Q Consensus 196 ~gktiGIIGlG~IG~-~vA~~l~~~-g~~V~-~~d~~~~--~~~a~~~g~~~-~~l~ell~--~aDvV~l~~P 260 (600)
.-.+|||||+|.||+ .+++.++.. ++++. ++|++.. ...+.+.|+.. .+++++++ +.|+|++|+|
T Consensus 26 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp 98 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLP 98 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCC
T ss_pred CceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCC
Confidence 346899999999998 789998876 78887 5787652 23345567754 58999997 5899999999
No 232
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.62 E-value=0.004 Score=67.50 Aligned_cols=101 Identities=20% Similarity=0.287 Sum_probs=72.6
Q ss_pred ceeccCCEEEEEecC----------hhHHHHHHHhhcCCCEEEEECCCCChhHHHHc-CCccc-CHHHHhccCCEEEEec
Q 007512 192 GVSLVGKTLAVLGFG----------KVGSEVARRAKGLGMHVIAHDPYAPADRARAI-GVDLV-SFDEAIATADFISLHM 259 (600)
Q Consensus 192 g~~l~gktiGIIGlG----------~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~-g~~~~-~l~ell~~aDvV~l~~ 259 (600)
+..+.|++|+|+|+. .-...+++.|...|.+|.+|||+...+..... ++.+. ++++.++.||+|++++
T Consensus 317 ~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~ad~vvi~t 396 (446)
T 4a7p_A 317 GGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGVEQASKMLTDVEFVENPYAAADGADALVIVT 396 (446)
T ss_dssp TSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCHHHHGGGCSSCCBCSCHHHHHTTBSEEEECS
T ss_pred cccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCCHhHHHhcCCceEecChhHHhcCCCEEEEee
Confidence 557899999999997 56789999999999999999999843222222 55544 6889999999999998
Q ss_pred CCCccccccccHhHh-ccCCCceEEEEccCCccccHHHH
Q 007512 260 PLTPATSKVLNDETF-GKMKKGVRIINVARGGVIDEEAL 297 (600)
Q Consensus 260 Pl~~~t~~li~~~~l-~~mk~gailvNvarg~ivde~aL 297 (600)
+-.+ -+. ++-..+ ..|+ +.+|+|+ |+ +.+.+.+
T Consensus 397 ~~~~-f~~-~d~~~~~~~~~-~~~i~D~-r~-~~~~~~~ 430 (446)
T 4a7p_A 397 EWDA-FRA-LDLTRIKNSLK-SPVLVDL-RN-IYPPAEL 430 (446)
T ss_dssp CCTT-TTS-CCHHHHHTTBS-SCBEECS-SC-CSCHHHH
T ss_pred CCHH-hhc-CCHHHHHHhcC-CCEEEEC-CC-CCCHHHH
Confidence 8433 222 344444 4465 4689995 54 3466554
No 233
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.61 E-value=0.0037 Score=64.81 Aligned_cols=62 Identities=16% Similarity=0.239 Sum_probs=46.5
Q ss_pred CEEEEEecChhHHHHHHHhhcCCC-EEEEECCCCChhHH--H--H-----c--C--Ccc-cCHHHHhccCCEEEEecC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYAPADRA--R--A-----I--G--VDL-VSFDEAIATADFISLHMP 260 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~~~~~a--~--~-----~--g--~~~-~~l~ell~~aDvV~l~~P 260 (600)
++|+|||.|.+|..+|..+...|+ +|..||........ . + . . +.. .++ +.+++||+|+++++
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g 81 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAG 81 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCC
Confidence 589999999999999999987777 89999987632111 0 0 1 1 122 356 77999999999993
No 234
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=96.60 E-value=0.0049 Score=64.03 Aligned_cols=63 Identities=17% Similarity=0.257 Sum_probs=47.4
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCCChhHH--HH-------c--C--Ccc-cCHHHHhccCCEEEEecC
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYAPADRA--RA-------I--G--VDL-VSFDEAIATADFISLHMP 260 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~~~~~a--~~-------~--g--~~~-~~l~ell~~aDvV~l~~P 260 (600)
.++|+|||.|.+|..+|..+...|+ +|..||........ .. . . +.. .++ +.+++||+|+++++
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg 91 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAG 91 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCC
Confidence 3699999999999999999988787 99999987632211 00 0 1 122 356 78999999999994
No 235
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.58 E-value=0.0037 Score=61.48 Aligned_cols=90 Identities=17% Similarity=0.197 Sum_probs=63.0
Q ss_pred ceeccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhH---HHHcCCccc--C-HHHHhccCCEEEEecCCCccc
Q 007512 192 GVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADR---ARAIGVDLV--S-FDEAIATADFISLHMPLTPAT 265 (600)
Q Consensus 192 g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~---a~~~g~~~~--~-l~ell~~aDvV~l~~Pl~~~t 265 (600)
...+.|+++.|||.|.+|...++.|...|.+|.+++|....+. +.+.++.+. . -++.+..+|+|+.++...+
T Consensus 26 fl~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~d~~-- 103 (223)
T 3dfz_A 26 MLDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATNDQA-- 103 (223)
T ss_dssp EECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCCCTH--
T ss_pred EEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCCCHH--
Confidence 3589999999999999999999999999999999999875432 222234332 1 2356788999987765332
Q ss_pred cccccHhHhccCCCceEEEEcc
Q 007512 266 SKVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 266 ~~li~~~~l~~mk~gailvNva 287 (600)
+|.......+ -.++||+.
T Consensus 104 ---~N~~I~~~ak-~gi~VNvv 121 (223)
T 3dfz_A 104 ---VNKFVKQHIK-NDQLVNMA 121 (223)
T ss_dssp ---HHHHHHHHSC-TTCEEEC-
T ss_pred ---HHHHHHHHHh-CCCEEEEe
Confidence 3444444455 45778864
No 236
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=96.57 E-value=0.001 Score=68.31 Aligned_cols=62 Identities=16% Similarity=0.300 Sum_probs=46.4
Q ss_pred CEEEEEecChhHHHHHHHhhcC-CCEEE-EECCCCChhHHHHcC--Cc-ccCHHHHhc--cCCEEEEecCC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL-GMHVI-AHDPYAPADRARAIG--VD-LVSFDEAIA--TADFISLHMPL 261 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~-g~~V~-~~d~~~~~~~a~~~g--~~-~~~l~ell~--~aDvV~l~~Pl 261 (600)
.+|||||+|.||+.+++.++.. +++++ ++|++.. .+.+.. +. +.+++++++ ++|+|++|+|.
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~--~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~ 79 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPD--NLALVPPGCVIESDWRSVVSAPEVEAVIIATPP 79 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHH--HHTTCCTTCEEESSTHHHHTCTTCCEEEEESCG
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHH--HHHHHHhhCcccCCHHHHhhCCCCCEEEEeCCh
Confidence 4799999999999999999875 67765 6887642 222111 33 347899985 79999999993
No 237
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=96.57 E-value=0.015 Score=59.96 Aligned_cols=123 Identities=18% Similarity=0.230 Sum_probs=83.5
Q ss_pred CceeecCCC-CChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEec---ChhHHHHHHHhhcC
Q 007512 144 GCLVVNAPT-ANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGF---GKVGSEVARRAKGL 219 (600)
Q Consensus 144 GI~V~n~p~-~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGl---G~IG~~vA~~l~~~ 219 (600)
+|+|+|+-. ...-++ .+++=++.+.+++ | .+.|.+|+++|= |++..+++..+..+
T Consensus 121 ~vPVINag~G~~~HPt--QaLaDl~Ti~e~~------------------g-~l~gl~va~vGD~~~~rva~Sl~~~~~~~ 179 (310)
T 3csu_A 121 NVPVLNAGDGSNQHPT--QTLLDLFTIQETQ------------------G-RLDNLHVAMVGDLKYGRTVHSLTQALAKF 179 (310)
T ss_dssp TCCEEEEEETTSCCHH--HHHHHHHHHHHHH------------------S-CSSSCEEEEESCTTTCHHHHHHHHHHHTS
T ss_pred CCCEEcCccCCCCCch--HHHHHHHHHHHHh------------------C-CcCCcEEEEECCCCCCchHHHHHHHHHhC
Confidence 689999753 444333 3333344443311 2 478999999998 59999999999999
Q ss_pred -CCEEEEECCCC--C-h---hHHHHcCCcc---cCHHHHhccCCEEEEecCCCc----cc------cccccHhHhccCCC
Q 007512 220 -GMHVIAHDPYA--P-A---DRARAIGVDL---VSFDEAIATADFISLHMPLTP----AT------SKVLNDETFGKMKK 279 (600)
Q Consensus 220 -g~~V~~~d~~~--~-~---~~a~~~g~~~---~~l~ell~~aDvV~l~~Pl~~----~t------~~li~~~~l~~mk~ 279 (600)
|++|....|.. + . +.+++.|... .++++++++||+|..-.=-.+ +. ..-++.+.++.+||
T Consensus 180 ~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~y~v~~~ll~~a~~ 259 (310)
T 3csu_A 180 DGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKA 259 (310)
T ss_dssp SSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC-----------------CCBCGGGGTTCCT
T ss_pred CCCEEEEECCcccccCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCccccccCHHHHHHHhhccCCCHHHHhhcCC
Confidence 99999988753 2 2 2234456542 479999999999987543111 00 24568888888888
Q ss_pred ceEEEEcc
Q 007512 280 GVRIINVA 287 (600)
Q Consensus 280 gailvNva 287 (600)
+++|.-|.
T Consensus 260 ~ai~mH~l 267 (310)
T 3csu_A 260 NMKVLHPL 267 (310)
T ss_dssp TCEEECCS
T ss_pred CCEEECCC
Confidence 99888886
No 238
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=96.56 E-value=0.0031 Score=66.04 Aligned_cols=64 Identities=17% Similarity=0.324 Sum_probs=50.6
Q ss_pred CCEEEEEecChhHHHHHHHhh-cC-CCEEE-EECCCCCh--hHHHHcC--Cc-ccCHHHHhc--cCCEEEEecC
Q 007512 197 GKTLAVLGFGKVGSEVARRAK-GL-GMHVI-AHDPYAPA--DRARAIG--VD-LVSFDEAIA--TADFISLHMP 260 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~-~~-g~~V~-~~d~~~~~--~~a~~~g--~~-~~~l~ell~--~aDvV~l~~P 260 (600)
-.+|||||+|.||+..++.++ .. ++++. ++|++... ..+.+.| .. +.++++++. +.|+|++|+|
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp 96 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITAS 96 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSC
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCC
Confidence 458999999999999999998 54 78877 58988743 3345567 33 458999987 4899999999
No 239
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=96.53 E-value=0.014 Score=60.77 Aligned_cols=127 Identities=19% Similarity=0.167 Sum_probs=87.9
Q ss_pred hCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecC--hhHHHHHHHhhcC
Q 007512 142 EFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFG--KVGSEVARRAKGL 219 (600)
Q Consensus 142 ~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG--~IG~~vA~~l~~~ 219 (600)
..+|+|+|+-+...-++ .+++=++.+.+++ .|..+.|.+|++||=| ++..+++..+..+
T Consensus 119 ~~~vPVINa~~~~~HPt--Q~LaDl~Ti~e~~-----------------~g~~l~gl~ia~vGD~~~~va~Sl~~~~~~~ 179 (333)
T 1duv_G 119 YASVPVWNGLTNEFHPT--QLLADLLTMQEHL-----------------PGKAFNEMTLVYAGDARNNMGNSMLEAAALT 179 (333)
T ss_dssp HHSSCEEESCCSSCCHH--HHHHHHHHHHHHS-----------------TTCCGGGCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred hCCCCeEcCCCCCCCch--HHHHHHHHHHHHh-----------------cCCCCCCcEEEEECCCccchHHHHHHHHHHc
Confidence 34689999776554444 3444444444420 1335789999999986 9999999999999
Q ss_pred CCEEEEECCCC---ChhH-------HHHcCCc---ccCHHHHhccCCEEEEecCC--Cc------c-----ccccccHhH
Q 007512 220 GMHVIAHDPYA---PADR-------ARAIGVD---LVSFDEAIATADFISLHMPL--TP------A-----TSKVLNDET 273 (600)
Q Consensus 220 g~~V~~~d~~~---~~~~-------a~~~g~~---~~~l~ell~~aDvV~l~~Pl--~~------~-----t~~li~~~~ 273 (600)
|++|....|.. +.+. +.+.|.. ..++++.+++||+|..-.=. .. + ...-++.+.
T Consensus 180 G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~~~~~~~er~~~~~~y~v~~~l 259 (333)
T 1duv_G 180 GLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLREYQVNSKM 259 (333)
T ss_dssp CCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHHGGGCBCHHH
T ss_pred CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHHHhCCCCEEEeCCccccCccccchHHHHHHhhccccCHHH
Confidence 99999988753 2211 2256643 34899999999999883321 10 0 124578888
Q ss_pred hccC-CCceEEEEcc
Q 007512 274 FGKM-KKGVRIINVA 287 (600)
Q Consensus 274 l~~m-k~gailvNva 287 (600)
++.+ ||+++|.-|.
T Consensus 260 l~~a~~~~ai~mHcL 274 (333)
T 1duv_G 260 MQLTGNPEVKFLHCL 274 (333)
T ss_dssp HHTTCCTTCEEEECS
T ss_pred HHhccCCCcEEECCC
Confidence 8888 9999999986
No 240
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.51 E-value=0.0016 Score=65.06 Aligned_cols=97 Identities=16% Similarity=0.219 Sum_probs=62.4
Q ss_pred HHHHHHcCccccccccceeccCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCC-------------------ChhH-
Q 007512 176 ADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYA-------------------PADR- 234 (600)
Q Consensus 176 ~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~-------------------~~~~- 234 (600)
+.++++-.+|... ....|.+++|.|||+|.+|..+|+.|...|. ++..+|+.. +...
T Consensus 12 y~Rq~~l~~~g~~--~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~ 89 (249)
T 1jw9_B 12 YNRQIILRGFDFD--GQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVES 89 (249)
T ss_dssp THHHHTSTTTHHH--HHHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHH
T ss_pred hhheecccccCHH--HHHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHH
Confidence 3444444456432 1246899999999999999999999998886 899998765 1111
Q ss_pred H----HHc--CCc--c----c---CHHHHhccCCEEEEecCCCccccccccHhHhc
Q 007512 235 A----RAI--GVD--L----V---SFDEAIATADFISLHMPLTPATSKVLNDETFG 275 (600)
Q Consensus 235 a----~~~--g~~--~----~---~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~ 275 (600)
+ .+. .+. . . ++++++.++|+|+.+++ +.+++.++++....
T Consensus 90 ~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~~~~l~~~~~~ 144 (249)
T 1jw9_B 90 ARDALTRINPHIAITPVNALLDDAELAALIAEHDLVLDCTD-NVAVRNQLNAGCFA 144 (249)
T ss_dssp HHHHHHHHCTTSEEEEECSCCCHHHHHHHHHTSSEEEECCS-SHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCcEEEEEeccCCHhHHHHHHhCCCEEEEeCC-CHHHHHHHHHHHHH
Confidence 1 111 111 1 1 24556778888888876 45566666655443
No 241
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=96.51 E-value=0.015 Score=61.08 Aligned_cols=127 Identities=21% Similarity=0.165 Sum_probs=85.8
Q ss_pred HHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecC--hhHHHHHHHhh
Q 007512 140 ATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFG--KVGSEVARRAK 217 (600)
Q Consensus 140 a~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG--~IG~~vA~~l~ 217 (600)
|...+|+|+|+-+...-++ .+++=++.+.++ .| .+.|++|++||=| ++..+++..+.
T Consensus 144 A~~s~vPVINa~~~~~HPt--QaLaDl~Ti~E~------------------~G-~l~glkva~vGD~~nnva~Sl~~~~~ 202 (365)
T 4amu_A 144 VKYSGVPVWNGLTDDEHPT--QIIADFMTMKEK------------------FG-NLKNKKIVFIGDYKNNVGVSTMIGAA 202 (365)
T ss_dssp HHHHCSCEEEEECSSCCHH--HHHHHHHHHHHH------------------HS-SCTTCEEEEESSTTSHHHHHHHHHHH
T ss_pred HHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHH------------------hC-CCCCCEEEEECCCCcchHHHHHHHHH
Confidence 4445789999865444333 233333333331 12 3789999999988 78999999999
Q ss_pred cCCCEEEEECCCC--C---hh-------HHHHcCCc---ccCHHHHhccCCEEEEec--CCCcc-----------ccccc
Q 007512 218 GLGMHVIAHDPYA--P---AD-------RARAIGVD---LVSFDEAIATADFISLHM--PLTPA-----------TSKVL 269 (600)
Q Consensus 218 ~~g~~V~~~d~~~--~---~~-------~a~~~g~~---~~~l~ell~~aDvV~l~~--Pl~~~-----------t~~li 269 (600)
.+|++|....|.. + .+ .+.+.|.. ..++++++++||+|..-+ ...++ ...-+
T Consensus 203 ~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDVVytd~W~smg~~~~~~~er~~~~~~y~v 282 (365)
T 4amu_A 203 FNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFSTDKILAAQDADVIYTDVWVSLGEPFELFDKRIGELKNFQV 282 (365)
T ss_dssp HTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEESCHHHHTTTCSEEEECCSCCTTCCHHHHHHHHHHHTTCCB
T ss_pred HcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEECCHHHHhcCCCEEEecccccCCchhhhHHHHHHHhccccc
Confidence 9999999988753 2 11 12345643 248999999999998732 11211 02447
Q ss_pred cHhHhccCCCceEEEEcc
Q 007512 270 NDETFGKMKKGVRIINVA 287 (600)
Q Consensus 270 ~~~~l~~mk~gailvNva 287 (600)
+.+.++.+||+++|.-|.
T Consensus 283 t~ell~~a~~dai~MHcL 300 (365)
T 4amu_A 283 DMNMIKAAKNDVIFLHCL 300 (365)
T ss_dssp CHHHHHHSCTTCEEEECS
T ss_pred CHHHHHhcCCCcEEECCC
Confidence 888888889999999886
No 242
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=96.50 E-value=0.0032 Score=65.11 Aligned_cols=99 Identities=16% Similarity=0.182 Sum_probs=63.6
Q ss_pred CEEEEEecChhHHHHHHHhhcC-CCEEE-EECCCCChhHHHHcCCc-ccCHHHHhccCCEEEEecCCCccccccccHhHh
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL-GMHVI-AHDPYAPADRARAIGVD-LVSFDEAIATADFISLHMPLTPATSKVLNDETF 274 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~-g~~V~-~~d~~~~~~~a~~~g~~-~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l 274 (600)
.+|||||+|+||+.+++.+... ++++. ++|++.....+ .|+. +.++++++.++|+|++|+|.... -+...
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~~~~--~gv~~~~d~~~ll~~~DvViiatp~~~h-----~~~~~ 76 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLDTK--TPVFDVADVDKHADDVDVLFLCMGSATD-----IPEQA 76 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCSSS--SCEEEGGGGGGTTTTCSEEEECSCTTTH-----HHHHH
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHHhhc--CCCceeCCHHHHhcCCCEEEEcCCcHHH-----HHHHH
Confidence 3799999999999999999866 68865 57877532211 4543 24678888899999999984421 12233
Q ss_pred ccCCCceEEEEccCCccc--cH-HHHHHhHhc
Q 007512 275 GKMKKGVRIINVARGGVI--DE-EALVRALDS 303 (600)
Q Consensus 275 ~~mk~gailvNvarg~iv--de-~aL~~aL~~ 303 (600)
..++.|.-++...-..+- +. +.|.++.++
T Consensus 77 ~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~ 108 (320)
T 1f06_A 77 PKFAQFACTVDTYDNHRDIPRHRQVMNEAATA 108 (320)
T ss_dssp HHHTTTSEEECCCCCGGGHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEECCCCcCCHHHHHHHHHHHHHh
Confidence 446667766665443321 22 345554444
No 243
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.49 E-value=0.016 Score=59.61 Aligned_cols=126 Identities=15% Similarity=0.122 Sum_probs=83.2
Q ss_pred HhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEec-ChhHHHHHHHhhcC
Q 007512 141 TEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGF-GKVGSEVARRAKGL 219 (600)
Q Consensus 141 ~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGl-G~IG~~vA~~l~~~ 219 (600)
...+|+|+|+-+...-++ .+++=++.+.++ .| .+.|.+|++||= +++..+.+..+..+
T Consensus 119 ~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~------------------~g-~l~glkva~vGD~~~va~Sl~~~~~~~ 177 (309)
T 4f2g_A 119 ENSRVPVINGLTNEYHPC--QVLADIFTYYEH------------------RG-PIRGKTVAWVGDANNMLYTWIQAARIL 177 (309)
T ss_dssp HTCSSCEEEEECSSCCHH--HHHHHHHHHHHH------------------HS-CCTTCEEEEESCCCHHHHHHHHHHHHH
T ss_pred HhCCCCEEECCCCccCcH--HHHHHHHHHHHH------------------hC-CCCCCEEEEECCCcchHHHHHHHHHHc
Confidence 345788999876554443 333333333331 12 478999999985 57888898899999
Q ss_pred CCEEEEECCCC---ChhH-HHHcCCc---ccCHHHHhccCCEEEEec--CCCc----------cccccccHhHhccCCCc
Q 007512 220 GMHVIAHDPYA---PADR-ARAIGVD---LVSFDEAIATADFISLHM--PLTP----------ATSKVLNDETFGKMKKG 280 (600)
Q Consensus 220 g~~V~~~d~~~---~~~~-a~~~g~~---~~~l~ell~~aDvV~l~~--Pl~~----------~t~~li~~~~l~~mk~g 280 (600)
|++|....|.. +.+. +++.|.. ..++++.+++||+|..-+ .... -...-++.+.++.+|++
T Consensus 178 G~~v~~~~P~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~r~~~~~~y~v~~~~l~~a~~~ 257 (309)
T 4f2g_A 178 DFKLQLSTPPGYALDAKLVDAESAPFYQVFDDPNEACKGADLVTTDVWTSMGFEAENEARKRAFADWCVDEEMMSHANSD 257 (309)
T ss_dssp TCEEEEECCGGGCCCGGGSCGGGGGGEEECSSHHHHTTTCSEEEECCC------------CCSGGGGCBCHHHHTTSCTT
T ss_pred CCEEEEECCcccCCCHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecccccCcchhhHHHHHHHhcCceeCHHHHHhcCCC
Confidence 99999988743 2221 2233332 248999999999998743 0000 01245788888889999
Q ss_pred eEEEEcc
Q 007512 281 VRIINVA 287 (600)
Q Consensus 281 ailvNva 287 (600)
++|.-|.
T Consensus 258 ai~mH~l 264 (309)
T 4f2g_A 258 ALFMHCL 264 (309)
T ss_dssp CEEEECS
T ss_pred eEEECCC
Confidence 9999886
No 244
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.49 E-value=0.0036 Score=64.68 Aligned_cols=98 Identities=18% Similarity=0.258 Sum_probs=63.8
Q ss_pred ceeccCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCCC-hhHHHH--------cCC--c---ccCH---HHHhccCC
Q 007512 192 GVSLVGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYAP-ADRARA--------IGV--D---LVSF---DEAIATAD 253 (600)
Q Consensus 192 g~~l~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~~-~~~a~~--------~g~--~---~~~l---~ell~~aD 253 (600)
+..+.||++.|+|.|.+|+.++..|...|. +|..+++... .+++++ .+. . ..++ .+.+.++|
T Consensus 143 ~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~D 222 (312)
T 3t4e_A 143 GFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASAD 222 (312)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCS
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCce
Confidence 456889999999999999999999999998 8999998732 222221 122 1 2233 55688999
Q ss_pred EEEEecCCCc--cccccccHhHhccCCCceEEEEccCCc
Q 007512 254 FISLHMPLTP--ATSKVLNDETFGKMKKGVRIINVARGG 290 (600)
Q Consensus 254 vV~l~~Pl~~--~t~~li~~~~l~~mk~gailvNvarg~ 290 (600)
+|+.++|..- .....+. .....++++.++.|+.-.+
T Consensus 223 iIINaTp~Gm~~~~~~~~~-~~~~~l~~~~~v~D~vY~P 260 (312)
T 3t4e_A 223 ILTNGTKVGMKPLENESLI-GDVSLLRPELLVTECVYNP 260 (312)
T ss_dssp EEEECSSTTSTTSTTCCSC-CCGGGSCTTCEEEECCCSS
T ss_pred EEEECCcCCCCCCCCCccc-CCHHHcCCCCEEEEeccCC
Confidence 9999999652 1111110 0112356677777765443
No 245
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.48 E-value=0.0023 Score=61.95 Aligned_cols=66 Identities=12% Similarity=0.192 Sum_probs=49.0
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEEECCCCCh-hH-HHHcCCcc-----cC---HHHH-hccCCEEEEecCCCc
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPA-DR-ARAIGVDL-----VS---FDEA-IATADFISLHMPLTP 263 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~-~~-a~~~g~~~-----~~---l~el-l~~aDvV~l~~Pl~~ 263 (600)
++|.|+|+|.+|+.+|+.|...|.+|+++|++... +. +...|+.. .+ ++++ +.+||+|++++|...
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~ 77 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDE 77 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcH
Confidence 46899999999999999999999999999987632 22 23345532 12 4443 678999999998543
No 246
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=96.47 E-value=0.0025 Score=67.42 Aligned_cols=65 Identities=23% Similarity=0.391 Sum_probs=47.1
Q ss_pred eeccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcC----CcccC---HHHHhccCCEEEE
Q 007512 193 VSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIG----VDLVS---FDEAIATADFISL 257 (600)
Q Consensus 193 ~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g----~~~~~---l~ell~~aDvV~l 257 (600)
.-+.||||+|+|.|.+|+.+++.++.+|++|+++|++.......... ..+.+ +.++++++|+|+.
T Consensus 10 ~~~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~~ 81 (389)
T 3q2o_A 10 IILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTY 81 (389)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCCEeee
Confidence 35789999999999999999999999999999999875221110000 01222 5677888888754
No 247
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=96.45 E-value=0.0033 Score=64.98 Aligned_cols=63 Identities=13% Similarity=0.160 Sum_probs=48.9
Q ss_pred CEEEEEecChhHHHHHHHhhcCC---CEEEE-ECCCCC--hhHHHHcCCc--ccCHHHHhc--cCCEEEEecC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLG---MHVIA-HDPYAP--ADRARAIGVD--LVSFDEAIA--TADFISLHMP 260 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g---~~V~~-~d~~~~--~~~a~~~g~~--~~~l~ell~--~aDvV~l~~P 260 (600)
.++||||+|.||+..++.++..+ +++.+ +|++.. ...+.+.|+. +.++++++. +.|+|++|+|
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 75 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQ 75 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCC
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCC
Confidence 48999999999999999998653 56654 787752 2344566773 458999997 6999999999
No 248
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=96.43 E-value=0.04 Score=57.37 Aligned_cols=130 Identities=15% Similarity=0.187 Sum_probs=83.8
Q ss_pred HHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEec-ChhHHHHHHHhh
Q 007512 139 AATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGF-GKVGSEVARRAK 217 (600)
Q Consensus 139 aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGl-G~IG~~vA~~l~ 217 (600)
.|...+|+|+|+-+...-++ .+++=++.+.++++ .|..+.|.+|++||= +++..+++..+.
T Consensus 135 lA~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~~~----------------~G~~l~glkva~vGD~~rva~Sl~~~~~ 196 (339)
T 4a8t_A 135 LANCATIPVINGMSDYNHPT--QELGDLCTMVEHLP----------------EGKKLEDCKVVFVGDATQVCFSLGLITT 196 (339)
T ss_dssp HHHHCSSCEEECCCSSCCHH--HHHHHHHHHHHTCC----------------TTCCGGGCEEEEESSCCHHHHHHHHHHH
T ss_pred HHHhCCCCEEECCCCCcCcH--HHHHHHHHHHHHhh----------------cCCCCCCCEEEEECCCchhHHHHHHHHH
Confidence 34456799999876544333 33333444433110 033588999999986 688899999999
Q ss_pred cCCCEEEEECCCC--ChhH--------HHHcCCc---ccCHHHHhccCCEEEEec--CCCc--cc----------ccccc
Q 007512 218 GLGMHVIAHDPYA--PADR--------ARAIGVD---LVSFDEAIATADFISLHM--PLTP--AT----------SKVLN 270 (600)
Q Consensus 218 ~~g~~V~~~d~~~--~~~~--------a~~~g~~---~~~l~ell~~aDvV~l~~--Pl~~--~t----------~~li~ 270 (600)
.+|++|....|.. +.+. +.+.|.. ..+++ .+++||+|..-+ +..+ +. ..-++
T Consensus 197 ~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~-av~~aDvvytd~w~smg~~~~~~~er~~~~~~~y~vt 275 (339)
T 4a8t_A 197 KMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQVN 275 (339)
T ss_dssp HTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECCGG-GGTTCSEEEECCSSCCTTSCCCHHHHHHHHTTTTCBC
T ss_pred HcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECChh-HHcCCCEEEecCcccCCchhhhhHHHHHHhccccccC
Confidence 9999999988754 2211 2344643 24788 999999998732 1111 10 14457
Q ss_pred HhHhccCCCceEEEEcc
Q 007512 271 DETFGKMKKGVRIINVA 287 (600)
Q Consensus 271 ~~~l~~mk~gailvNva 287 (600)
.+.++.+|++++|.-|.
T Consensus 276 ~ell~~ak~dai~mHcL 292 (339)
T 4a8t_A 276 QEMMDRAGANCKFMHCL 292 (339)
T ss_dssp HHHHHHHCTTCEEEECS
T ss_pred HHHHHhcCCCcEEECCC
Confidence 77777778888888775
No 249
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.43 E-value=0.0058 Score=63.52 Aligned_cols=94 Identities=17% Similarity=0.115 Sum_probs=61.0
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCC--EEEEECCCCChhHH----HHcC-------Ccc-cCHHHHhccCCEEEEecCCC
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGM--HVIAHDPYAPADRA----RAIG-------VDL-VSFDEAIATADFISLHMPLT 262 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~--~V~~~d~~~~~~~a----~~~g-------~~~-~~l~ell~~aDvV~l~~Pl~ 262 (600)
.++|+|||.|.||.++|..+...|+ +|..+|........ .+.+ +.. .+..+.+++||+|+++.+.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag~- 83 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGA- 83 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCSC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEeccc-
Confidence 5689999999999999999986665 99999986422111 1111 111 1234678999999999873
Q ss_pred cccccc-----c--cH-------hHhccCCCceEEEEccCCcccc
Q 007512 263 PATSKV-----L--ND-------ETFGKMKKGVRIINVARGGVID 293 (600)
Q Consensus 263 ~~t~~l-----i--~~-------~~l~~mk~gailvNvarg~ivd 293 (600)
+...++ + |. +.+....|++++++++ ..+|
T Consensus 84 p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt--NPvd 126 (326)
T 3pqe_A 84 NQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT--NPVD 126 (326)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS--SSHH
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC--ChHH
Confidence 222222 1 11 1233356889999996 3444
No 250
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=96.42 E-value=0.0038 Score=64.79 Aligned_cols=62 Identities=19% Similarity=0.320 Sum_probs=48.3
Q ss_pred EEEEEecChhHHH-HHHHhhcC-CCEEEE-ECCCCC--hhHHHHcCCc--ccCHHHHhc--cCCEEEEecC
Q 007512 199 TLAVLGFGKVGSE-VARRAKGL-GMHVIA-HDPYAP--ADRARAIGVD--LVSFDEAIA--TADFISLHMP 260 (600)
Q Consensus 199 tiGIIGlG~IG~~-vA~~l~~~-g~~V~~-~d~~~~--~~~a~~~g~~--~~~l~ell~--~aDvV~l~~P 260 (600)
++||||+|.||+. .+..++.. +++|.+ +|++.. .+.+.+.|+. +.+++++++ +.|+|++|+|
T Consensus 25 rigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP 95 (350)
T 4had_A 25 RFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLP 95 (350)
T ss_dssp EEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSC
T ss_pred EEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCC
Confidence 7999999999986 56777765 788875 788762 3445677874 458999985 4899999999
No 251
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=96.42 E-value=0.0047 Score=64.57 Aligned_cols=84 Identities=18% Similarity=0.216 Sum_probs=52.4
Q ss_pred EEEEEecChhHHHHHHHhhcC-CCEEEE-ECCCCCh--hHHHHcCCccc------------------CHHHHhccCCEEE
Q 007512 199 TLAVLGFGKVGSEVARRAKGL-GMHVIA-HDPYAPA--DRARAIGVDLV------------------SFDEAIATADFIS 256 (600)
Q Consensus 199 tiGIIGlG~IG~~vA~~l~~~-g~~V~~-~d~~~~~--~~a~~~g~~~~------------------~l~ell~~aDvV~ 256 (600)
+|||+|+|+||+.+++.+... ++++.+ +|+.... ..+...|+... ++++++.++|+|+
T Consensus 3 kVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV~ 82 (340)
T 1b7g_O 3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIVV 82 (340)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEEE
T ss_pred EEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEEE
Confidence 799999999999999999865 688876 4654321 23334344321 3345566899999
Q ss_pred EecCCCccccccccHhHhccCCCceEEEEcc
Q 007512 257 LHMPLTPATSKVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 257 l~~Pl~~~t~~li~~~~l~~mk~gailvNva 287 (600)
.|+|... +.... .. .++.|+.+|+.+
T Consensus 83 ~aTp~~~-s~~~a--~~--~~~aG~kvV~~s 108 (340)
T 1b7g_O 83 DTTPNGV-GAQYK--PI--YLQLQRNAIFQG 108 (340)
T ss_dssp ECCSTTH-HHHHH--HH--HHHTTCEEEECT
T ss_pred ECCCCch-hHHHH--HH--HHHcCCeEEEeC
Confidence 9998442 11111 11 134566666654
No 252
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.41 E-value=0.0033 Score=62.91 Aligned_cols=96 Identities=17% Similarity=0.241 Sum_probs=66.8
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCCEEE-EECCCCChhHHHHcCCcc-cCHHHHhccCCEEEEecCCCccccccccHhH
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGMHVI-AHDPYAPADRARAIGVDL-VSFDEAIATADFISLHMPLTPATSKVLNDET 273 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~~V~-~~d~~~~~~~a~~~g~~~-~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~ 273 (600)
+-++|++||+|.||+.+++. . ++++. +|+ ... .+.|+.. .+++++++++|+|+-|.+.. -+.+..
T Consensus 11 ~~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~-~k~----gelgv~a~~d~d~lla~pD~VVe~A~~~-----av~e~~ 77 (253)
T 1j5p_A 11 HHMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD-RIS----KDIPGVVRLDEFQVPSDVSTVVECASPE-----AVKEYS 77 (253)
T ss_dssp CCCEEEEECCSHHHHHHHHH--S-CCSEEEEEC-SSC----CCCSSSEECSSCCCCTTCCEEEECSCHH-----HHHHHH
T ss_pred ccceEEEECcCHHHHHHHhc--C-CcEEEEEEe-ccc----cccCceeeCCHHHHhhCCCEEEECCCHH-----HHHHHH
Confidence 45799999999999999998 4 77764 467 221 1226653 46999999999998887522 233334
Q ss_pred hccCCCceEEEEccCCccccH---HHHHHhHhcC
Q 007512 274 FGKMKKGVRIINVARGGVIDE---EALVRALDSG 304 (600)
Q Consensus 274 l~~mk~gailvNvarg~ivde---~aL~~aL~~g 304 (600)
...|+.|.-++-++-|.+.|. +.|.++-+.|
T Consensus 78 ~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~g 111 (253)
T 1j5p_A 78 LQILKNPVNYIIISTSAFADEVFRERFFSELKNS 111 (253)
T ss_dssp HHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHC
Confidence 455889999999988888775 3444444443
No 253
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.41 E-value=0.002 Score=69.25 Aligned_cols=91 Identities=20% Similarity=0.284 Sum_probs=64.4
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc-----C---HHHH-hccCCEEEEecCCCcccc
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV-----S---FDEA-IATADFISLHMPLTPATS 266 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~-----~---l~el-l~~aDvV~l~~Pl~~~t~ 266 (600)
+.+|.|+|+|++|+.+|+.|+..|.+|++.|.+. ..+.+.+.|+..+ + |.++ +.+||+|++++|....+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~ 83 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNL 83 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHH
Confidence 4579999999999999999999999999999886 3455666776432 2 3333 688999999999544322
Q ss_pred ccccHhHhccCCCceEEEEccCC
Q 007512 267 KVLNDETFGKMKKGVRIINVARG 289 (600)
Q Consensus 267 ~li~~~~l~~mk~gailvNvarg 289 (600)
.-......+.|+..+|--++.
T Consensus 84 --~i~~~ar~~~p~~~Iiara~~ 104 (413)
T 3l9w_A 84 --QLTEMVKEHFPHLQIIARARD 104 (413)
T ss_dssp --HHHHHHHHHCTTCEEEEEESS
T ss_pred --HHHHHHHHhCCCCeEEEEECC
Confidence 223344556677666654443
No 254
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=96.38 E-value=0.0047 Score=64.79 Aligned_cols=88 Identities=24% Similarity=0.303 Sum_probs=64.7
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHH-HcCCccc----C---HHHHhccCCEEEEecCCCcccc
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRAR-AIGVDLV----S---FDEAIATADFISLHMPLTPATS 266 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~-~~g~~~~----~---l~ell~~aDvV~l~~Pl~~~t~ 266 (600)
.|++|.|+|.|.||...++.++.+|++|++.++.. ..+.+. ++|...+ + +.++....|+|+-++.....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~~-- 264 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHP-- 264 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHHH--
Confidence 58899999999999999999999999999998765 334444 6776422 2 23334568999888874321
Q ss_pred ccccHhHhccCCCceEEEEccC
Q 007512 267 KVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 267 ~li~~~~l~~mk~gailvNvar 288 (600)
-...+..|+++..+++++.
T Consensus 265 ---~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 265 ---LLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp ---SHHHHHHEEEEEEEEECCC
T ss_pred ---HHHHHHHHhcCCEEEEEcc
Confidence 2455667888888888874
No 255
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=96.37 E-value=0.03 Score=57.89 Aligned_cols=126 Identities=17% Similarity=0.119 Sum_probs=84.2
Q ss_pred HhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecC-hhHHHHHHHhhcC
Q 007512 141 TEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFG-KVGSEVARRAKGL 219 (600)
Q Consensus 141 ~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG-~IG~~vA~~l~~~ 219 (600)
...+|+|+|+-+.+.-++ .+++=++.+.+++ | .+.|.+|++||=| ++..+.+..+..+
T Consensus 120 ~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~------------------g-~l~gl~va~vGD~~~va~Sl~~~~~~~ 178 (321)
T 1oth_A 120 KEASIPIINGLSDLYHPI--QILADYLTLQEHY------------------S-SLKGLTLSWIGDGNNILHSIMMSAAKF 178 (321)
T ss_dssp HHCSSCEEESCCSSCCHH--HHHHHHHHHHHHH------------------S-CCTTCEEEEESCSSHHHHHHHTTTGGG
T ss_pred HhCCCCEEcCCCCCCCcH--HHHHHHHHHHHHh------------------C-CcCCcEEEEECCchhhHHHHHHHHHHc
Confidence 345789999876555444 3444444444421 2 4789999999985 5888888888899
Q ss_pred CCEEEEECCCC---Chh---HH----HHcCC--c-ccCHHHHhccCCEEEEecCC--Ccc----------ccccccHhHh
Q 007512 220 GMHVIAHDPYA---PAD---RA----RAIGV--D-LVSFDEAIATADFISLHMPL--TPA----------TSKVLNDETF 274 (600)
Q Consensus 220 g~~V~~~d~~~---~~~---~a----~~~g~--~-~~~l~ell~~aDvV~l~~Pl--~~~----------t~~li~~~~l 274 (600)
|++|....|.. +.+ .+ .+.|. . ..++++.+++||+|..-+-. ..+ ...-++.+.+
T Consensus 179 G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~d~w~s~g~e~~~~~~~~~~~~y~v~~~~l 258 (321)
T 1oth_A 179 GMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDTWISMGREEEKKKRLQAFQGYQVTMKTA 258 (321)
T ss_dssp TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCGGGHHHHHHHTTTCCBCHHHH
T ss_pred CCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhccCCEEEEeccccccchhhhHHHHHhccCceECHHHH
Confidence 99999988754 221 11 13453 3 34899999999999984311 111 1144677778
Q ss_pred ccCCCceEEEEcc
Q 007512 275 GKMKKGVRIINVA 287 (600)
Q Consensus 275 ~~mk~gailvNva 287 (600)
+.+||+++|.-|.
T Consensus 259 ~~a~~dai~mH~l 271 (321)
T 1oth_A 259 KVAASDWTFLHCL 271 (321)
T ss_dssp HTSCTTCEEEECS
T ss_pred hhcCCCCEEECCC
Confidence 8888888888885
No 256
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=96.36 E-value=0.0091 Score=62.39 Aligned_cols=103 Identities=14% Similarity=0.170 Sum_probs=64.7
Q ss_pred CEEEEEecChhHHHHHHHhhcC-CCEEE-EECCCCCh--hHHHHcCC----c-ccCHHHHhc--cCCEEEEecCCCcccc
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL-GMHVI-AHDPYAPA--DRARAIGV----D-LVSFDEAIA--TADFISLHMPLTPATS 266 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~-g~~V~-~~d~~~~~--~~a~~~g~----~-~~~l~ell~--~aDvV~l~~Pl~~~t~ 266 (600)
.+|||||+|.||+.+++.++.. ++++. ++|++... ..+.+.|+ . +.+++++++ ++|+|++|+|... ..
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~-h~ 85 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSL-HV 85 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGG-HH
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChHH-HH
Confidence 4799999999999999998865 67775 57877522 23445563 2 358999986 5999999999332 11
Q ss_pred ccccHhHhccCCCce-EEEEcc-CCccccHHHHHHhHhcCC
Q 007512 267 KVLNDETFGKMKKGV-RIINVA-RGGVIDEEALVRALDSGR 305 (600)
Q Consensus 267 ~li~~~~l~~mk~ga-ilvNva-rg~ivde~aL~~aL~~g~ 305 (600)
+-....++.|. +++.-- --.+-+.++|.++.++..
T Consensus 86 ----~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g 122 (362)
T 1ydw_A 86 ----EWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANG 122 (362)
T ss_dssp ----HHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTT
T ss_pred ----HHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcC
Confidence 11223356665 343321 112223456676666543
No 257
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.31 E-value=0.0088 Score=61.24 Aligned_cols=93 Identities=19% Similarity=0.156 Sum_probs=59.3
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCC--EEEEECCCCChhH--HH--HcCC------c--ccCHHHHhccCCEEEEecCCC
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGM--HVIAHDPYAPADR--AR--AIGV------D--LVSFDEAIATADFISLHMPLT 262 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~--~V~~~d~~~~~~~--a~--~~g~------~--~~~l~ell~~aDvV~l~~Pl~ 262 (600)
.++|+|||.|.+|..+|..|...|. +|..+|+...... +. ..+. . ..+-.+.++.||+|+++++..
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii~v~~~ 86 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGPR 86 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEECCCCC
Confidence 4689999999999999999988888 9999998752211 11 1222 1 111235678999999999633
Q ss_pred cccccc------------cc--HhHhccCCCceEEEEccCCc
Q 007512 263 PATSKV------------LN--DETFGKMKKGVRIINVARGG 290 (600)
Q Consensus 263 ~~t~~l------------i~--~~~l~~mk~gailvNvarg~ 290 (600)
. ..+. +. ...+....++++++++.-|-
T Consensus 87 ~-~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~ 127 (319)
T 1lld_A 87 Q-KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPV 127 (319)
T ss_dssp C-CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred C-CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCch
Confidence 2 1110 00 11122236788999886543
No 258
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.30 E-value=0.0032 Score=61.52 Aligned_cols=85 Identities=16% Similarity=0.273 Sum_probs=56.3
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCCh-hHHHHcCCccc-----C---HHHH-hccCCEEEEecCCCcccc
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPA-DRARAIGVDLV-----S---FDEA-IATADFISLHMPLTPATS 266 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~-~~a~~~g~~~~-----~---l~el-l~~aDvV~l~~Pl~~~t~ 266 (600)
.+++.|+|+|.+|+.+|+.|...|. |+++|++... +.+. .|+..+ + |+++ +.+||.|++++|....
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~-- 84 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSE-- 84 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHH--
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHH--
Confidence 4689999999999999999999999 9999987632 2333 555321 2 3333 7889999999984432
Q ss_pred ccccHhHhccCCCceEEEE
Q 007512 267 KVLNDETFGKMKKGVRIIN 285 (600)
Q Consensus 267 ~li~~~~l~~mk~gailvN 285 (600)
.+.-......+.++..++-
T Consensus 85 n~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 85 TIHCILGIRKIDESVRIIA 103 (234)
T ss_dssp HHHHHHHHHHHCSSSEEEE
T ss_pred HHHHHHHHHHHCCCCeEEE
Confidence 2222333444666634433
No 259
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.29 E-value=0.0089 Score=64.80 Aligned_cols=95 Identities=16% Similarity=0.202 Sum_probs=67.8
Q ss_pred ceeccCCEEEEEecC----------hhHHHHHHHhhcCCCEEEEECCCCChhHHHHcC--Cccc-CHHHHhccCCEEEEe
Q 007512 192 GVSLVGKTLAVLGFG----------KVGSEVARRAKGLGMHVIAHDPYAPADRARAIG--VDLV-SFDEAIATADFISLH 258 (600)
Q Consensus 192 g~~l~gktiGIIGlG----------~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g--~~~~-~l~ell~~aDvV~l~ 258 (600)
+..+.|++|+|+|+- .=...+++.|...|.+|.+|||+...+.....+ +.+. ++++.++.||.|+++
T Consensus 313 ~~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~ 392 (450)
T 3gg2_A 313 KGNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAMKEAQKRLGDKVEYTTDMYDAVRGAEALFHV 392 (450)
T ss_dssp TTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGSEECSSHHHHTTTCSCEEEC
T ss_pred cccCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCcHHHHHhcCccceecCCHHHHhcCCCEEEEc
Confidence 456899999999985 236789999999999999999998433222333 4443 678999999999999
Q ss_pred cCCCccccccccHhHh-ccCCCceEEEEccCCc
Q 007512 259 MPLTPATSKVLNDETF-GKMKKGVRIINVARGG 290 (600)
Q Consensus 259 ~Pl~~~t~~li~~~~l-~~mk~gailvNvarg~ 290 (600)
++-. +-+. ++-..+ ..|+ +.+|+|+ |+-
T Consensus 393 t~~~-~f~~-~~~~~~~~~~~-~~~i~D~-r~~ 421 (450)
T 3gg2_A 393 TEWK-EFRM-PDWSALSQAMA-ASLVIDG-RNV 421 (450)
T ss_dssp SCCG-GGSS-CCHHHHHHHSS-SCEEEES-SCC
T ss_pred cCCH-HHhh-cCHHHHHHhcC-CCEEEEC-CCC
Confidence 9833 3333 344433 3465 5689995 543
No 260
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=96.29 E-value=0.038 Score=57.30 Aligned_cols=134 Identities=14% Similarity=0.121 Sum_probs=86.3
Q ss_pred HHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecC--hhHHHHHHHhh
Q 007512 140 ATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFG--KVGSEVARRAK 217 (600)
Q Consensus 140 a~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG--~IG~~vA~~l~ 217 (600)
|...+|+|+|+-....-++ .+++=++.+.+++.. .. .....+.|.+|++||=| ++..+.+..+.
T Consensus 118 A~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~~g~----------~~--~~~~~l~gl~va~vGD~~~~va~Sl~~~~~ 183 (328)
T 3grf_A 118 AQHASVPCINALDDFGHPL--QMVCDFMTIKEKFTA----------AG--EFSNGFKGIKFAYCGDSMNNVTYDLMRGCA 183 (328)
T ss_dssp HHHCSSCEEESSCSSCCHH--HHHHHHHHHHHHHHH----------TT--CCTTTGGGCCEEEESCCSSHHHHHHHHHHH
T ss_pred HHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHhCC----------cc--ccccccCCcEEEEeCCCCcchHHHHHHHHH
Confidence 3345788999876544443 334444444443221 00 01235889999999986 88999999999
Q ss_pred cCCCEEEEECCCC-C----hh---HHH----H--cCCc---ccCHHHHhccCCEEEEe----cCCCcc---------ccc
Q 007512 218 GLGMHVIAHDPYA-P----AD---RAR----A--IGVD---LVSFDEAIATADFISLH----MPLTPA---------TSK 267 (600)
Q Consensus 218 ~~g~~V~~~d~~~-~----~~---~a~----~--~g~~---~~~l~ell~~aDvV~l~----~Pl~~~---------t~~ 267 (600)
.+|++|....|.. . .+ .++ + .|.. ..++++.+++||+|..- +...++ ...
T Consensus 184 ~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvytd~W~sm~iq~er~~~~~~~~~~y 263 (328)
T 3grf_A 184 LLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDVVYTDSWMSYHITKEQKEARLKVLTPF 263 (328)
T ss_dssp HHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSEEEECCCC--------CCTHHHHHGGG
T ss_pred HcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEcCHHHHhcCCCEEEecCccccCCcHHHHHHHHHHhcCC
Confidence 9999999988753 2 11 122 2 4542 24899999999999863 221111 124
Q ss_pred cccHhHhccCCCceEEEEcc
Q 007512 268 VLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 268 li~~~~l~~mk~gailvNva 287 (600)
-++.+.++.+|++++|.-|.
T Consensus 264 ~vt~~~l~~a~~~ai~mH~l 283 (328)
T 3grf_A 264 QVDDAVMAVTSKRSIFMNCL 283 (328)
T ss_dssp CBCHHHHTTSCTTCEEEECS
T ss_pred CCCHHHHHhcCCCCEEECCC
Confidence 47888888899999999986
No 261
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=96.29 E-value=0.042 Score=57.16 Aligned_cols=128 Identities=22% Similarity=0.301 Sum_probs=85.5
Q ss_pred HHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEec-ChhHHHHHHHhh
Q 007512 139 AATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGF-GKVGSEVARRAK 217 (600)
Q Consensus 139 aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGl-G~IG~~vA~~l~ 217 (600)
.|...+|+|+|+-+...-++ .+++=++.+.++ .| .+.|.+|++||= +++..+.+..+.
T Consensus 142 lA~~~~vPVINag~~~~HPt--QaLaDl~TI~E~------------------~G-~l~glkva~vGD~~nva~Sl~~~~~ 200 (340)
T 4ep1_A 142 LAKESSIPVINGLTDDHHPC--QALADLMTIYEE------------------TN-TFKGIKLAYVGDGNNVCHSLLLASA 200 (340)
T ss_dssp HHHHCSSCEEEEECSSCCHH--HHHHHHHHHHHH------------------HS-CCTTCEEEEESCCCHHHHHHHHHHH
T ss_pred HHHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHH------------------hC-CCCCCEEEEECCCchhHHHHHHHHH
Confidence 44556899999765443333 333333333331 12 378999999986 578889999999
Q ss_pred cCCCEEEEECCCC--ChhH--------HHHcCCc---ccCHHHHhccCCEEEEecCCCc----c-------ccccccHhH
Q 007512 218 GLGMHVIAHDPYA--PADR--------ARAIGVD---LVSFDEAIATADFISLHMPLTP----A-------TSKVLNDET 273 (600)
Q Consensus 218 ~~g~~V~~~d~~~--~~~~--------a~~~g~~---~~~l~ell~~aDvV~l~~Pl~~----~-------t~~li~~~~ 273 (600)
.+|++|....|.. +.+. +.+.|.. ..++++++++||+|..-.=... + ...-++.+.
T Consensus 201 ~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDVvyt~~w~smg~e~~~~~~~~~~~y~vt~el 280 (340)
T 4ep1_A 201 KVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDVWMSMGQEGEEEKYTLFQPYQINKEL 280 (340)
T ss_dssp HHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHHHHHTTCSEEEECCC------CHHHHHHHHGGGCBCHHH
T ss_pred HcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhCCCCEEEecCccCCCCCchHHHHHHhccccCCHHH
Confidence 9999999988753 2211 2345643 2489999999999987442110 0 124578888
Q ss_pred hccCCCceEEEEcc
Q 007512 274 FGKMKKGVRIINVA 287 (600)
Q Consensus 274 l~~mk~gailvNva 287 (600)
++.+|++++|.-|.
T Consensus 281 l~~ak~dai~MHcL 294 (340)
T 4ep1_A 281 VKHAKQTYHFLHCL 294 (340)
T ss_dssp HTTSCTTCEEEECS
T ss_pred HHhcCCCcEEECCC
Confidence 88899999999887
No 262
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=96.27 E-value=0.0046 Score=65.78 Aligned_cols=89 Identities=18% Similarity=0.272 Sum_probs=61.4
Q ss_pred EEEEEecChhHHHHHHHhhcCC--------CEEEEECCCCC---hhHHHHc-----------CCc-------ccCHHHHh
Q 007512 199 TLAVLGFGKVGSEVARRAKGLG--------MHVIAHDPYAP---ADRARAI-----------GVD-------LVSFDEAI 249 (600)
Q Consensus 199 tiGIIGlG~IG~~vA~~l~~~g--------~~V~~~d~~~~---~~~a~~~-----------g~~-------~~~l~ell 249 (600)
+|+|||.|.-|..+|..|...| .+|..|.+... ....... |+. ..++++.+
T Consensus 36 KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~al 115 (391)
T 4fgw_A 36 KVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDSV 115 (391)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHHH
T ss_pred eEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHHH
Confidence 8999999999999999987433 35777755431 1111111 121 13789999
Q ss_pred ccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCC
Q 007512 250 ATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARG 289 (600)
Q Consensus 250 ~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg 289 (600)
+.||+|++++| ....+.++ ++....++++..+|+++.|
T Consensus 116 ~~ad~ii~avP-s~~~r~~l-~~l~~~~~~~~~iv~~~KG 153 (391)
T 4fgw_A 116 KDVDIIVFNIP-HQFLPRIC-SQLKGHVDSHVRAISCLKG 153 (391)
T ss_dssp TTCSEEEECSC-GGGHHHHH-HHHTTTSCTTCEEEECCCS
T ss_pred hcCCEEEEECC-hhhhHHHH-HHhccccCCCceeEEeccc
Confidence 99999999999 44344444 2334457899999999987
No 263
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=96.27 E-value=0.0061 Score=63.02 Aligned_cols=94 Identities=20% Similarity=0.215 Sum_probs=60.2
Q ss_pred CEEEEEecChhHHHHHHHhhcCCC--EEEEECCCCChhHHH--H-------c--CCcc--cCHHHHhccCCEEEEecCCC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGM--HVIAHDPYAPADRAR--A-------I--GVDL--VSFDEAIATADFISLHMPLT 262 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~--~V~~~d~~~~~~~a~--~-------~--g~~~--~~l~ell~~aDvV~l~~Pl~ 262 (600)
++|+|||.|.||.++|..+...|+ +|..+|......... + . .... .+..+.+++||+|+++.+..
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~ 80 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP 80 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence 479999999999999999886665 999999876432111 1 1 1222 24568899999999998743
Q ss_pred ccccccc-------cH-------hHhccCCCceEEEEccCCccccH
Q 007512 263 PATSKVL-------ND-------ETFGKMKKGVRIINVARGGVIDE 294 (600)
Q Consensus 263 ~~t~~li-------~~-------~~l~~mk~gailvNvarg~ivde 294 (600)
...++- |. +.+....|++++++++ ..+|.
T Consensus 81 -~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt--NPvd~ 123 (314)
T 3nep_X 81 -RSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA--NPLDV 123 (314)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC--SSHHH
T ss_pred -CCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC--CchhH
Confidence 222221 11 1233456889999986 34443
No 264
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=96.26 E-value=0.048 Score=57.06 Aligned_cols=128 Identities=15% Similarity=0.191 Sum_probs=80.4
Q ss_pred HhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEec-ChhHHHHHHHhhcC
Q 007512 141 TEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGF-GKVGSEVARRAKGL 219 (600)
Q Consensus 141 ~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGl-G~IG~~vA~~l~~~ 219 (600)
...+|+|+|+-+...-++ .+++=++.+.++++ .|..+.|.+|++||= +++..+++..+..|
T Consensus 115 ~~~~vPVINag~~~~HPt--QaLaDl~TI~E~~~----------------~G~~l~glkva~vGD~~rva~Sl~~~~~~~ 176 (355)
T 4a8p_A 115 NCATIPVINGMSDYNHPT--QELGDLCTMVEHLP----------------EGKKLEDCKVVFVGDATQVCFSLGLITTKM 176 (355)
T ss_dssp HHCSSCEEECCCSSCCHH--HHHHHHHHHHHTCC----------------TTCCGGGCEEEEESCCCHHHHHHHHHHHHT
T ss_pred HhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHhh----------------cCCCCCCCEEEEECCCchhHHHHHHHHHHc
Confidence 345789999866443333 33333443433110 033588999999986 68889999999999
Q ss_pred CCEEEEECCCC--ChhH--------HHHcCCc---ccCHHHHhccCCEEEEec--CCCccc------------cccccHh
Q 007512 220 GMHVIAHDPYA--PADR--------ARAIGVD---LVSFDEAIATADFISLHM--PLTPAT------------SKVLNDE 272 (600)
Q Consensus 220 g~~V~~~d~~~--~~~~--------a~~~g~~---~~~l~ell~~aDvV~l~~--Pl~~~t------------~~li~~~ 272 (600)
|++|....|.. +.+. +.+.|.. ..+++ .+++||+|..-+ +..++. ..-++.+
T Consensus 177 G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~-av~~aDVVytd~w~smgq~~~~~~er~~~~~~~y~vt~e 255 (355)
T 4a8p_A 177 GMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQVNQE 255 (355)
T ss_dssp TCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECCGG-GGTTCSEEEECCSSEETTEECCHHHHHHHHTTTTCBCHH
T ss_pred CCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECCHH-HHcCCCEEEecccccCcchhhhhHHHHHHhccccccCHH
Confidence 99999988754 2211 2344643 24788 999999998632 111100 1345666
Q ss_pred HhccCCCceEEEEcc
Q 007512 273 TFGKMKKGVRIINVA 287 (600)
Q Consensus 273 ~l~~mk~gailvNva 287 (600)
.++.+|++++|.-|.
T Consensus 256 ll~~ak~dai~MHcL 270 (355)
T 4a8p_A 256 MMDRAGANCKFMHCL 270 (355)
T ss_dssp HHHHHCTTCEEEECS
T ss_pred HHHhcCCCcEEECCC
Confidence 666677777777765
No 265
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=96.25 E-value=0.0068 Score=65.40 Aligned_cols=94 Identities=21% Similarity=0.211 Sum_probs=71.3
Q ss_pred ceeccCCEEEEEecChhHHHHHHHhhcCCC---EEEEEC----CC----CChh---H-------HHHcCC--cccCHHHH
Q 007512 192 GVSLVGKTLAVLGFGKVGSEVARRAKGLGM---HVIAHD----PY----APAD---R-------ARAIGV--DLVSFDEA 248 (600)
Q Consensus 192 g~~l~gktiGIIGlG~IG~~vA~~l~~~g~---~V~~~d----~~----~~~~---~-------a~~~g~--~~~~l~el 248 (600)
|..+.++++.|+|.|..|+.+++.|...|. +|+.+| +. .... . +...+. ...++.+.
T Consensus 181 g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~ 260 (439)
T 2dvm_A 181 GKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEA 260 (439)
T ss_dssp TCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHH
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHH
Confidence 456789999999999999999999999998 799998 65 2111 0 111111 13468899
Q ss_pred hccCCEEEEecCCCccccccccHhHhccCCCceEEEEccC
Q 007512 249 IATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 249 l~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvar 288 (600)
++++|+|+.++|..+ +++.++.+..|+++.++.|++.
T Consensus 261 l~~aDVlInaT~~~~---G~~~~e~v~~m~~~~iVfDLyn 297 (439)
T 2dvm_A 261 LKDADVLISFTRPGP---GVIKPQWIEKMNEDAIVFPLAN 297 (439)
T ss_dssp HTTCSEEEECSCCCS---SSSCHHHHTTSCTTCEEEECCS
T ss_pred hccCCEEEEcCCCcc---CCCChHHHHhcCCCCEEEECCC
Confidence 999999999998532 4566677888999999999954
No 266
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.24 E-value=0.0054 Score=64.09 Aligned_cols=63 Identities=21% Similarity=0.327 Sum_probs=46.7
Q ss_pred CEEEEEecChhHHHHHHHhhcC--------CCEEEE-ECCCCC--hhHHHHcCCc--ccCHHHHhc--cCCEEEEecC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL--------GMHVIA-HDPYAP--ADRARAIGVD--LVSFDEAIA--TADFISLHMP 260 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~--------g~~V~~-~d~~~~--~~~a~~~g~~--~~~l~ell~--~aDvV~l~~P 260 (600)
-+|||||+|.||+.-++.++.. +++|.+ +|++.. ...+.+.|+. +.+++++++ +.|+|++|+|
T Consensus 26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~IatP 103 (393)
T 4fb5_A 26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTTP 103 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECSC
T ss_pred ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECCC
Confidence 4899999999999877766542 567775 688763 3456677874 458999986 5799999999
No 267
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.24 E-value=0.01 Score=61.46 Aligned_cols=95 Identities=15% Similarity=0.175 Sum_probs=61.5
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCCChhH--HH--Hc-------CCcc--cCHHHHhccCCEEEEecCC
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYAPADR--AR--AI-------GVDL--VSFDEAIATADFISLHMPL 261 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~~~~~--a~--~~-------g~~~--~~l~ell~~aDvV~l~~Pl 261 (600)
..++|+|||.|.+|.++|..+...|+ +|..||....... +. +. .... .+-.+.++.||+|+++.+.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ag~ 83 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTAGV 83 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcCCc
Confidence 35799999999999999999986666 9999998764321 11 11 1221 2234789999999999863
Q ss_pred Ccccccc-----c--cHh-------HhccCCCceEEEEccCCcccc
Q 007512 262 TPATSKV-----L--NDE-------TFGKMKKGVRIINVARGGVID 293 (600)
Q Consensus 262 ~~~t~~l-----i--~~~-------~l~~mk~gailvNvarg~ivd 293 (600)
. ...++ + |.. .+....|++++++++ ..+|
T Consensus 84 p-~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt--NPvd 126 (321)
T 3p7m_A 84 P-RKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT--NPLD 126 (321)
T ss_dssp C-CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHH
T ss_pred C-CCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec--CchH
Confidence 2 22222 1 111 122345889999994 4455
No 268
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=96.21 E-value=0.0065 Score=65.84 Aligned_cols=112 Identities=13% Similarity=0.148 Sum_probs=71.4
Q ss_pred cCCEEEEEecChh--HHHHHHHhhc----CCCEEEEECCCCCh-hHHHHc---------CCcc-cCHHHHhccCCEEEEe
Q 007512 196 VGKTLAVLGFGKV--GSEVARRAKG----LGMHVIAHDPYAPA-DRARAI---------GVDL-VSFDEAIATADFISLH 258 (600)
Q Consensus 196 ~gktiGIIGlG~I--G~~vA~~l~~----~g~~V~~~d~~~~~-~~a~~~---------g~~~-~~l~ell~~aDvV~l~ 258 (600)
..++|+|||.|.+ |..++..+.. .| +|..||..... +..... .+.. .+++++++.||||+++
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~a 82 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIIS 82 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEec
Confidence 4569999999998 5788877653 36 99999987521 211111 1222 3789999999999999
Q ss_pred cCCC-----------ccccccccH------------------------hHhccCCCceEEEEccCCccccHHHHHHhHhc
Q 007512 259 MPLT-----------PATSKVLND------------------------ETFGKMKKGVRIINVARGGVIDEEALVRALDS 303 (600)
Q Consensus 259 ~Pl~-----------~~t~~li~~------------------------~~l~~mk~gailvNvarg~ivde~aL~~aL~~ 303 (600)
++.. |.-.++... +.+....|+++++|++.--=+-..++.+.+..
T Consensus 83 irvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNPvdi~t~~~~k~~p~ 162 (450)
T 3fef_A 83 ILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLYKVFPG 162 (450)
T ss_dssp CCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHCTT
T ss_pred cccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHHHHCCC
Confidence 9753 333344222 12333468999999976443345555554445
Q ss_pred CCceE
Q 007512 304 GRVAQ 308 (600)
Q Consensus 304 g~i~g 308 (600)
.++.|
T Consensus 163 ~rviG 167 (450)
T 3fef_A 163 IKAIG 167 (450)
T ss_dssp CEEEE
T ss_pred CCEEE
Confidence 56655
No 269
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.19 E-value=0.0045 Score=64.87 Aligned_cols=63 Identities=16% Similarity=0.240 Sum_probs=47.1
Q ss_pred CEEEEEecChhHHH-HHHHhhcC-CCEEE-EECCCCCh-h-HHHHcC-Cc-ccCHHHHhccC--CEEEEecC
Q 007512 198 KTLAVLGFGKVGSE-VARRAKGL-GMHVI-AHDPYAPA-D-RARAIG-VD-LVSFDEAIATA--DFISLHMP 260 (600)
Q Consensus 198 ktiGIIGlG~IG~~-vA~~l~~~-g~~V~-~~d~~~~~-~-~a~~~g-~~-~~~l~ell~~a--DvV~l~~P 260 (600)
.+|||||+|.||+. .++.++.. ++++. ++|++... + .+...+ .. +.++++++++. |+|++|+|
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 77 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGP 77 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCC
Confidence 58999999999995 88998876 78887 67887522 1 222332 33 45899999855 99999999
No 270
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.17 E-value=0.01 Score=61.64 Aligned_cols=88 Identities=20% Similarity=0.245 Sum_probs=66.4
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc--CHHHHhccCCEEEEecCCCccccccccHh
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV--SFDEAIATADFISLHMPLTPATSKVLNDE 272 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~--~l~ell~~aDvV~l~~Pl~~~t~~li~~~ 272 (600)
.|.+|.|+|.|.||...++.++.+|.+|++.++.. ..+.++++|...+ +.+++.+..|+|+-++.... .-..
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~-----~~~~ 250 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHY-----DLKD 250 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCC-----CHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHH-----HHHH
Confidence 48899999999999999999999999999999776 5677888887532 33333336888888776332 1245
Q ss_pred HhccCCCceEEEEccC
Q 007512 273 TFGKMKKGVRIINVAR 288 (600)
Q Consensus 273 ~l~~mk~gailvNvar 288 (600)
.+..++++..++.++.
T Consensus 251 ~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 251 YLKLLTYNGDLALVGL 266 (348)
T ss_dssp HHTTEEEEEEEEECCC
T ss_pred HHHHHhcCCEEEEECC
Confidence 5667888888888864
No 271
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=96.14 E-value=0.006 Score=63.98 Aligned_cols=63 Identities=21% Similarity=0.383 Sum_probs=47.0
Q ss_pred CEEEEEecChhHHH-HHHHhhcC-CCEEE-EECCCCChhHHHHc-CCc-ccCHHHHhc--cCCEEEEecCC
Q 007512 198 KTLAVLGFGKVGSE-VARRAKGL-GMHVI-AHDPYAPADRARAI-GVD-LVSFDEAIA--TADFISLHMPL 261 (600)
Q Consensus 198 ktiGIIGlG~IG~~-vA~~l~~~-g~~V~-~~d~~~~~~~a~~~-g~~-~~~l~ell~--~aDvV~l~~Pl 261 (600)
.+|||||+|.||+. .++.++.. ++++. ++|++.... .... ++. +.+++++++ +.|+|++|+|.
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~-~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 77 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKV-KRDLPDVTVIASPEAAVQHPDVDLVVIASPN 77 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHH-HHHCTTSEEESCHHHHHTCTTCSEEEECSCG
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHH-HhhCCCCcEECCHHHHhcCCCCCEEEEeCCh
Confidence 47999999999997 77777766 78886 478765222 2233 443 358999998 79999999993
No 272
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=96.12 E-value=0.068 Score=54.94 Aligned_cols=132 Identities=14% Similarity=0.072 Sum_probs=87.0
Q ss_pred HhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceecc-CCEEEEEec-ChhHHHHHHHhhc
Q 007512 141 TEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLV-GKTLAVLGF-GKVGSEVARRAKG 218 (600)
Q Consensus 141 ~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~-gktiGIIGl-G~IG~~vA~~l~~ 218 (600)
...+|+|+|+-....-++ .+++=++.+.++ .| .+. |.+|++||= +++..+.+..+..
T Consensus 110 ~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~------------------~g-~l~~gl~va~vGD~~~va~Sl~~~~~~ 168 (307)
T 3tpf_A 110 RYSKAPVINALSELYHPT--QVLGDLFTIKEW------------------NK-MQNGIAKVAFIGDSNNMCNSWLITAAI 168 (307)
T ss_dssp HHCSSCEEEEECSSCCHH--HHHHHHHHHHHT------------------TC-CGGGCCEEEEESCSSHHHHHHHHHHHH
T ss_pred HhCCCCEEeCCCCCcCcH--HHHHHHHHHHHH------------------hC-CCCCCCEEEEEcCCCccHHHHHHHHHH
Confidence 445788999765444333 333333433331 12 477 999999996 5788899989999
Q ss_pred CCCEEEEECCCC--C-hhH---H----HHcCCc---ccCHHHHhccCCEEEEec--CCCcc----------ccccccHhH
Q 007512 219 LGMHVIAHDPYA--P-ADR---A----RAIGVD---LVSFDEAIATADFISLHM--PLTPA----------TSKVLNDET 273 (600)
Q Consensus 219 ~g~~V~~~d~~~--~-~~~---a----~~~g~~---~~~l~ell~~aDvV~l~~--Pl~~~----------t~~li~~~~ 273 (600)
+|++|....|.. + .+. + ++.|.. ..++++.+++||+|..-. ....+ ...-++.+.
T Consensus 169 ~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~~~~~~~~y~v~~e~ 248 (307)
T 3tpf_A 169 LGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVITDTWVSMGEENEKERKIKEFEGFMIDEKA 248 (307)
T ss_dssp HTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCSSCTTGGGGHHHHHHHTGGGCBCHHH
T ss_pred cCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecCcccCCchhhHHHHHHHhcccccCHHH
Confidence 999999988753 2 221 1 244543 248999999999998754 11110 124468888
Q ss_pred hccCCCceEEEEcc---CCcccc
Q 007512 274 FGKMKKGVRIINVA---RGGVID 293 (600)
Q Consensus 274 l~~mk~gailvNva---rg~ivd 293 (600)
++.+|++++|.-|. ||.=|+
T Consensus 249 l~~a~~~ai~mH~lPa~Rg~EI~ 271 (307)
T 3tpf_A 249 MSVANKDAILLHCLPAYRGYEVS 271 (307)
T ss_dssp HHHSCTTCEEEECSCCCBTTTBC
T ss_pred HHhcCCCcEEECCCCCCCCceeC
Confidence 88889999999886 554443
No 273
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=96.11 E-value=0.037 Score=58.00 Aligned_cols=128 Identities=21% Similarity=0.252 Sum_probs=87.8
Q ss_pred HHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecC--hhHHHHHHHhh
Q 007512 140 ATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFG--KVGSEVARRAK 217 (600)
Q Consensus 140 a~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG--~IG~~vA~~l~ 217 (600)
|...+|+|+|+-+...-++ .+++=++.+.++ .| .+.|.+|+++|=| ++..+++..+.
T Consensus 140 A~~s~vPVINa~~~~~HPt--QaLaDl~Ti~E~------------------~g-~l~gl~va~vGD~~~rva~Sl~~~~~ 198 (359)
T 2w37_A 140 ARDSGVPVWNGLTDEWHPT--QMLADFMTVKEN------------------FG-KLQGLTLTFMGDGRNNVANSLLVTGA 198 (359)
T ss_dssp HHHSSSCEEEEECSSCCHH--HHHHHHHHHHHH------------------HS-CCTTCEEEEESCTTSHHHHHHHHHHH
T ss_pred HHhCCCCEEcCCCCCCCcc--HHHHHHHHHHHH------------------hC-CcCCeEEEEECCCccchHHHHHHHHH
Confidence 3445789999766544443 344444444431 12 5789999999996 99999999999
Q ss_pred cCCCEEEEECCCC---ChhH-------HHHcCCc---ccCHHHHhccCCEEEEecC--CCcc---------ccccccHhH
Q 007512 218 GLGMHVIAHDPYA---PADR-------ARAIGVD---LVSFDEAIATADFISLHMP--LTPA---------TSKVLNDET 273 (600)
Q Consensus 218 ~~g~~V~~~d~~~---~~~~-------a~~~g~~---~~~l~ell~~aDvV~l~~P--l~~~---------t~~li~~~~ 273 (600)
.+|++|....|.. +.+. +.+.|.. ..++++++++||+|..-.= ...+ ...-++.+.
T Consensus 199 ~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~ee~~er~~~~~~y~v~~el 278 (359)
T 2w37_A 199 ILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTDVWVSMGESNWEERVKELTPYQVNMEA 278 (359)
T ss_dssp HHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSCCTTCTTHHHHHHHHGGGCBCHHH
T ss_pred HcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEEcccccccccchHHHHHHhhccccCHHH
Confidence 9999999988753 2211 2255643 3489999999999988332 1110 124568888
Q ss_pred hccCC---CceEEEEccC
Q 007512 274 FGKMK---KGVRIINVAR 288 (600)
Q Consensus 274 l~~mk---~gailvNvar 288 (600)
++.+| |+++|.-|.-
T Consensus 279 l~~ak~~~~dai~MHcLP 296 (359)
T 2w37_A 279 MKKTGTPDDQLIFMHCLP 296 (359)
T ss_dssp HHTTCCCGGGCEEEECSC
T ss_pred HHhhCCCCCCEEEECCCC
Confidence 88888 8999998863
No 274
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=96.11 E-value=0.01 Score=62.50 Aligned_cols=85 Identities=18% Similarity=0.266 Sum_probs=55.4
Q ss_pred CCEEEEEe-cChhHHHHHHHhhcC-CCEEEEECCCCCh--hHHHH----cC-----CcccCHHHHhccCCEEEEecCCCc
Q 007512 197 GKTLAVLG-FGKVGSEVARRAKGL-GMHVIAHDPYAPA--DRARA----IG-----VDLVSFDEAIATADFISLHMPLTP 263 (600)
Q Consensus 197 gktiGIIG-lG~IG~~vA~~l~~~-g~~V~~~d~~~~~--~~a~~----~g-----~~~~~l~ell~~aDvV~l~~Pl~~ 263 (600)
..+|+|+| .|.||+.+.+.|... .+++.+.....+. ..... .+ +...+ ++.+..+|+|++|+|...
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~atp~~~ 94 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCLPHGT 94 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEECCCTTT
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEcCCchh
Confidence 46899999 999999999999876 4688876433221 11111 11 11112 556678999999999543
Q ss_pred cccccccHhHhccCCCceEEEEccC
Q 007512 264 ATSKVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 264 ~t~~li~~~~l~~mk~gailvNvar 288 (600)
..+.....+.|+.+||.+.
T Consensus 95 ------s~~~a~~~~aG~~VId~sa 113 (359)
T 1xyg_A 95 ------TQEIIKELPTALKIVDLSA 113 (359)
T ss_dssp ------HHHHHHTSCTTCEEEECSS
T ss_pred ------HHHHHHHHhCCCEEEECCc
Confidence 2232222377999999975
No 275
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.11 E-value=0.0062 Score=63.27 Aligned_cols=96 Identities=15% Similarity=0.105 Sum_probs=59.5
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCC--EEEEECCCCChhHH--HH--c------CCcc-cCHHHHhccCCEEEEecCCC
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGM--HVIAHDPYAPADRA--RA--I------GVDL-VSFDEAIATADFISLHMPLT 262 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~--~V~~~d~~~~~~~a--~~--~------g~~~-~~l~ell~~aDvV~l~~Pl~ 262 (600)
.+++|+|||.|.||.++|..+...|+ ++..||........ .+ . .+.. .+..+.+++||+|+++....
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~~ 87 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGAP 87 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCCC
Confidence 46799999999999999999986665 99999986422111 11 1 1111 23457899999999997632
Q ss_pred c---ccc-ccc--cH-------hHhccCCCceEEEEccCCcccc
Q 007512 263 P---ATS-KVL--ND-------ETFGKMKKGVRIINVARGGVID 293 (600)
Q Consensus 263 ~---~t~-~li--~~-------~~l~~mk~gailvNvarg~ivd 293 (600)
. +++ .++ |. +.+.+..|++++++++ ..+|
T Consensus 88 ~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt--NPvd 129 (326)
T 3vku_A 88 QKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA--NPVD 129 (326)
T ss_dssp ----------------CHHHHHHHHHTTTCCSEEEECS--SSHH
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc--CchH
Confidence 1 122 112 11 1233356788999985 4444
No 276
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=96.08 E-value=0.011 Score=61.21 Aligned_cols=110 Identities=19% Similarity=0.206 Sum_probs=65.0
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCC--EEEEECCCCCh--hHHHHc--CC------cc-cCHHHHhccCCEEEEecCCCc
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGM--HVIAHDPYAPA--DRARAI--GV------DL-VSFDEAIATADFISLHMPLTP 263 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~--~V~~~d~~~~~--~~a~~~--g~------~~-~~l~ell~~aDvV~l~~Pl~~ 263 (600)
.++|+|||.|.+|.++|..+...|. +|..||..... ..+.++ +. .. .+-.+.+++||+|+++++...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p~ 86 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGANR 86 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 3689999999999999999987776 99999986522 112221 11 01 123567999999999998432
Q ss_pred cccccc-------c----H---hHhccCCCceEEEEccCCcccc--HHHHHHh--HhcCCceEE
Q 007512 264 ATSKVL-------N----D---ETFGKMKKGVRIINVARGGVID--EEALVRA--LDSGRVAQA 309 (600)
Q Consensus 264 ~t~~li-------~----~---~~l~~mk~gailvNvarg~ivd--e~aL~~a--L~~g~i~ga 309 (600)
..++- | . +.+....|+++++++ ...++ ...+.+. +...++.|.
T Consensus 87 -k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~--tNPv~~~~~~~~k~s~~p~~rviG~ 147 (318)
T 1y6j_A 87 -KPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV--SNPVDIITYMIQKWSGLPVGKVIGS 147 (318)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC--SSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred -CCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe--cCcHHHHHHHHHHHcCCCHHHEecc
Confidence 22220 0 0 122223689999997 34444 3333333 344567665
No 277
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.07 E-value=0.0059 Score=65.75 Aligned_cols=64 Identities=22% Similarity=0.254 Sum_probs=49.1
Q ss_pred CEEEEEecChhHH-HHHHHhhcC-CCEEE-EECCCCCh--hHHHHcCCc------ccCHHHHhc--cCCEEEEecCC
Q 007512 198 KTLAVLGFGKVGS-EVARRAKGL-GMHVI-AHDPYAPA--DRARAIGVD------LVSFDEAIA--TADFISLHMPL 261 (600)
Q Consensus 198 ktiGIIGlG~IG~-~vA~~l~~~-g~~V~-~~d~~~~~--~~a~~~g~~------~~~l~ell~--~aDvV~l~~Pl 261 (600)
.+|||||+|.||+ .+++.++.. ++++. ++|++... ..+...|+. +.++++++. ++|+|++|+|.
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~ 160 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPN 160 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCG
T ss_pred eEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCc
Confidence 4899999999997 899998865 67765 67887522 234455764 458999987 79999999993
No 278
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=96.07 E-value=0.017 Score=59.28 Aligned_cols=63 Identities=19% Similarity=0.230 Sum_probs=46.6
Q ss_pred CEEEEEecChhHHHHHHHhhcCCC-EEEEECCCCChhHH--HH--c-------CC--cc-cCHHHHhccCCEEEEecCC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYAPADRA--RA--I-------GV--DL-VSFDEAIATADFISLHMPL 261 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~~~~~a--~~--~-------g~--~~-~~l~ell~~aDvV~l~~Pl 261 (600)
++|+|||.|.+|..+|..+...|. +|..+|........ .+ . .. .. .++ +.+++||+|+++++.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~ 80 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGA 80 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCC
Confidence 589999999999999999987775 89999987532211 11 1 11 12 356 679999999999863
No 279
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=96.06 E-value=0.055 Score=55.94 Aligned_cols=125 Identities=22% Similarity=0.235 Sum_probs=82.4
Q ss_pred hCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEec-ChhHHHHHHHhhcCC
Q 007512 142 EFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGF-GKVGSEVARRAKGLG 220 (600)
Q Consensus 142 ~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGl-G~IG~~vA~~l~~~g 220 (600)
..+|+|+|+-....-++ .+++=++.+.++ .| .+.|.+|++||= +++..+.+..+..+|
T Consensus 123 ~~~vPVINag~~~~HPt--QaLaDl~Ti~e~------------------~g-~l~glkva~vGD~~rva~Sl~~~~~~~G 181 (323)
T 3gd5_A 123 YAGIPVINALTDHEHPC--QVVADLLTIREN------------------FG-RLAGLKLAYVGDGNNVAHSLLLGCAKVG 181 (323)
T ss_dssp HHCSCEEEEECSSCCHH--HHHHHHHHHHHH------------------HS-CCTTCEEEEESCCCHHHHHHHHHHHHHT
T ss_pred hCCCCEEeCCCCCCCcH--HHHHHHHHHHHH------------------hC-CCCCCEEEEECCCCcHHHHHHHHHHHcC
Confidence 35788999765443333 333333333331 12 478999999986 688889999998999
Q ss_pred CEEEEECCCC--C-hh---H----HHHcCCc---ccCHHHHhccCCEEEEecCCC--cc----------ccccccHhHhc
Q 007512 221 MHVIAHDPYA--P-AD---R----ARAIGVD---LVSFDEAIATADFISLHMPLT--PA----------TSKVLNDETFG 275 (600)
Q Consensus 221 ~~V~~~d~~~--~-~~---~----a~~~g~~---~~~l~ell~~aDvV~l~~Pl~--~~----------t~~li~~~~l~ 275 (600)
++|....|.. + .+ . +.+.|.. ..++++.+++||+|..-.=.. .+ ...-++.+.++
T Consensus 182 ~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvvyt~~wqs~g~~~~~~~~~~~~~~y~vt~ell~ 261 (323)
T 3gd5_A 182 MSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTDVWTSMGQEAETQHRLQLFEQYQINAALLN 261 (323)
T ss_dssp CEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCCC---------CCHHHHTTCCBCHHHHH
T ss_pred CEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEEeceecCCCcccchHHHHHhhccCCCHHHHh
Confidence 9999988753 2 21 1 2234543 248999999999997753111 00 12346888888
Q ss_pred cCCCceEEEEcc
Q 007512 276 KMKKGVRIINVA 287 (600)
Q Consensus 276 ~mk~gailvNva 287 (600)
.+|++++|.-|.
T Consensus 262 ~ak~dai~mHcl 273 (323)
T 3gd5_A 262 CAAAEAIVLHCL 273 (323)
T ss_dssp TSCTTCEEEECS
T ss_pred hcCCCcEEECCC
Confidence 889999998886
No 280
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.05 E-value=0.0055 Score=66.78 Aligned_cols=93 Identities=16% Similarity=0.241 Sum_probs=57.9
Q ss_pred ccceeccCCEEEEEecChhHHHHHHHhhcC-CCEEEEECCCCCh-hH-HHHcCCc-----cc---CHHHHhccCCEEEEe
Q 007512 190 YVGVSLVGKTLAVLGFGKVGSEVARRAKGL-GMHVIAHDPYAPA-DR-ARAIGVD-----LV---SFDEAIATADFISLH 258 (600)
Q Consensus 190 ~~g~~l~gktiGIIGlG~IG~~vA~~l~~~-g~~V~~~d~~~~~-~~-a~~~g~~-----~~---~l~ell~~aDvV~l~ 258 (600)
+.+..+.+++|.|+|.|.+|+.+++.|... |.+|.++|+.... +. +...++. .. ++.++++.+|+|+.|
T Consensus 16 ~~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~ 95 (467)
T 2axq_A 16 HIEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISL 95 (467)
T ss_dssp -------CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEEC
T ss_pred ccccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEEC
Confidence 456788899999999999999999999976 7899999987532 11 1122332 11 355778899999999
Q ss_pred cCCCccccccccHhHhccCCCceEEEEcc
Q 007512 259 MPLTPATSKVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 259 ~Pl~~~t~~li~~~~l~~mk~gailvNva 287 (600)
+|.... .. + ..+.+++|..+++++
T Consensus 96 tp~~~~-~~-v---~~a~l~~g~~vvd~~ 119 (467)
T 2axq_A 96 IPYTFH-PN-V---VKSAIRTKTDVVTSS 119 (467)
T ss_dssp SCGGGH-HH-H---HHHHHHHTCEEEECS
T ss_pred Cchhhh-HH-H---HHHHHhcCCEEEEee
Confidence 995421 11 1 112234566666654
No 281
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=96.05 E-value=0.017 Score=62.76 Aligned_cols=93 Identities=23% Similarity=0.233 Sum_probs=67.4
Q ss_pred eccCCEEEEEecCh----------hHHHHHHHhhcCCCEEEEECCCCChhHHHHc--------------CCccc-CHHHH
Q 007512 194 SLVGKTLAVLGFGK----------VGSEVARRAKGLGMHVIAHDPYAPADRARAI--------------GVDLV-SFDEA 248 (600)
Q Consensus 194 ~l~gktiGIIGlG~----------IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~--------------g~~~~-~l~el 248 (600)
.+.|++|+|+|+.- -...+++.|...|.+|.+|||+...+..... ++.+. +..+.
T Consensus 326 ~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (467)
T 2q3e_A 326 TVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEA 405 (467)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHCC------CHHHHHEEECSSHHHH
T ss_pred ccCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHHHhhhhccccccccccccCceeecCCHHHH
Confidence 48899999999974 6788999999999999999999754432111 23333 67888
Q ss_pred hccCCEEEEecCCCccccccccHhHh-ccCCCceEEEEccCC
Q 007512 249 IATADFISLHMPLTPATSKVLNDETF-GKMKKGVRIINVARG 289 (600)
Q Consensus 249 l~~aDvV~l~~Pl~~~t~~li~~~~l-~~mk~gailvNvarg 289 (600)
++.||+|++++.- ++-+. ++-..+ ..|+...+|+|+ |+
T Consensus 406 ~~~ad~~vi~t~~-~~f~~-~~~~~~~~~~~~~~~i~D~-r~ 444 (467)
T 2q3e_A 406 CDGAHAVVICTEW-DMFKE-LDYERIHKKMLKPAFIFDG-RR 444 (467)
T ss_dssp HTTCSEEEECSCC-GGGGG-SCHHHHHHHSCSSCEEEES-SC
T ss_pred HhCCcEEEEecCC-hhhhc-CCHHHHHHhcCCCCEEEeC-CC
Confidence 9999999999984 33333 344433 457776668886 44
No 282
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=95.96 E-value=0.015 Score=58.87 Aligned_cols=65 Identities=17% Similarity=0.158 Sum_probs=49.1
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCCCh--hHHHHcCCccc-CHHHHhccCCEEEEecCCC
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYAPA--DRARAIGVDLV-SFDEAIATADFISLHMPLT 262 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~~~--~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~ 262 (600)
.++++.|+|.|.+|+.++..|...|. +|.++++.... ..+.+.+..+. ++. +.++|+|+.++|..
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~g 186 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIG 186 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCC
Confidence 47899999999999999999999997 79999987522 23334454332 222 47899999999965
No 283
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=95.96 E-value=0.01 Score=61.79 Aligned_cols=63 Identities=19% Similarity=0.282 Sum_probs=47.8
Q ss_pred CEEEEEecChhHH-HHHHHhhcC-CCEEE-EECCCCChhHHHH---cCCc-ccCHHHHhcc--CCEEEEecC
Q 007512 198 KTLAVLGFGKVGS-EVARRAKGL-GMHVI-AHDPYAPADRARA---IGVD-LVSFDEAIAT--ADFISLHMP 260 (600)
Q Consensus 198 ktiGIIGlG~IG~-~vA~~l~~~-g~~V~-~~d~~~~~~~a~~---~g~~-~~~l~ell~~--aDvV~l~~P 260 (600)
.+|||||+|.||+ ..+..++.. +++|. ++|+......+.+ .++. +.++++++.+ .|+|++|+|
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp 74 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLHVNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTP 74 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTTCCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSC
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCCHHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCC
Confidence 3799999999999 577777765 78886 5787743444444 3554 4589999986 899999999
No 284
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=95.93 E-value=0.037 Score=56.43 Aligned_cols=99 Identities=18% Similarity=0.243 Sum_probs=69.4
Q ss_pred HHhCCceeec-CCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEec---ChhHHHHHHH
Q 007512 140 ATEFGCLVVN-APTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGF---GKVGSEVARR 215 (600)
Q Consensus 140 a~~~GI~V~n-~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGl---G~IG~~vA~~ 215 (600)
|+..+|+|+| .-|...-++ .+++=++.+.++ .| .+.|.+|+++|= +++..+.+..
T Consensus 109 a~~~~vPVINAG~g~~~HPt--QaLaDl~Ti~e~------------------~g-~l~gl~va~vGDl~~~rva~Sl~~~ 167 (291)
T 3d6n_B 109 VKSLNLRLVNAGDGTHQHPS--QGLIDFFTIKEH------------------FG-EVKDLRVLYVGDIKHSRVFRSGAPL 167 (291)
T ss_dssp HHTCSSEEEEEEETTTBCHH--HHHHHHHHHHHH------------------HS-CCTTCEEEEESCCTTCHHHHHHHHH
T ss_pred HHhCCCCEEeCccCCCcCcH--HHHHHHHHHHHH------------------hC-CcCCcEEEEECCCCCCchHHHHHHH
Confidence 3445689999 434444443 333334444331 12 478999999997 8999999999
Q ss_pred hhcCCCEEEEECCCC--ChhHHHHcCCcc-cCHHHHhccCCEEEEecCC
Q 007512 216 AKGLGMHVIAHDPYA--PADRARAIGVDL-VSFDEAIATADFISLHMPL 261 (600)
Q Consensus 216 l~~~g~~V~~~d~~~--~~~~a~~~g~~~-~~l~ell~~aDvV~l~~Pl 261 (600)
+..+|++|....|.. +.+ ..+.|+.. .++++.+++||+|.. +-.
T Consensus 168 ~~~~g~~v~~~~P~~~~p~~-~~~~g~~~~~d~~eav~~aDvvy~-~~~ 214 (291)
T 3d6n_B 168 LNMFGAKIGVCGPKTLIPRD-VEVFKVDVFDDVDKGIDWADVVIW-LRL 214 (291)
T ss_dssp HHHTTCEEEEESCGGGSCTT-GGGGCEEEESSHHHHHHHCSEEEE-CCC
T ss_pred HHHCCCEEEEECCchhCCch-HHHCCCEEEcCHHHHhCCCCEEEE-eCc
Confidence 999999999988754 222 22456553 489999999999998 664
No 285
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=95.92 E-value=0.0065 Score=63.29 Aligned_cols=65 Identities=17% Similarity=0.214 Sum_probs=47.0
Q ss_pred CEEEEEecChhHHH-HHHHhhcC-CCEEE-EECCCCChhHHHHcCCc-ccCHHHHhcc--CCEEEEecCCC
Q 007512 198 KTLAVLGFGKVGSE-VARRAKGL-GMHVI-AHDPYAPADRARAIGVD-LVSFDEAIAT--ADFISLHMPLT 262 (600)
Q Consensus 198 ktiGIIGlG~IG~~-vA~~l~~~-g~~V~-~~d~~~~~~~a~~~g~~-~~~l~ell~~--aDvV~l~~Pl~ 262 (600)
.+|||||+|.||+. .++.++.. ++++. ++|++.....+...++. +.++++++.+ .|+|++|+|..
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 78 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHADWPAIPVVSDPQMLFNDPSIDLIVIPTPND 78 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHTTCSSCCEESCHHHHHHCSSCCEEEECSCTT
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEeCChH
Confidence 47999999999997 78888766 78886 47876422211112333 3589999976 99999999943
No 286
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=95.92 E-value=0.012 Score=60.77 Aligned_cols=95 Identities=17% Similarity=0.184 Sum_probs=61.0
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCC--ChhHHHH-----------cCC--cccCHHHHhccCCEEEEec
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYA--PADRARA-----------IGV--DLVSFDEAIATADFISLHM 259 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~--~~~~a~~-----------~g~--~~~~l~ell~~aDvV~l~~ 259 (600)
..++|+|||.|.+|..+|..+...|+ +|..||... ....... ... ...+-.+.+++||+|+++.
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIiaa 86 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVITA 86 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEeC
Confidence 46799999999999999999988888 999999873 1111110 011 1122246789999999998
Q ss_pred CCCcccccc-----c--cH-------hHhccCCCceEEEEccCCcccc
Q 007512 260 PLTPATSKV-----L--ND-------ETFGKMKKGVRIINVARGGVID 293 (600)
Q Consensus 260 Pl~~~t~~l-----i--~~-------~~l~~mk~gailvNvarg~ivd 293 (600)
... ...++ + |. +.+....|++++++++ ..+|
T Consensus 87 g~p-~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs--NPvd 131 (315)
T 3tl2_A 87 GIA-RKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT--NPVD 131 (315)
T ss_dssp SCC-CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHH
T ss_pred CCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC--ChHH
Confidence 632 21221 1 11 1222346889999986 3444
No 287
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.92 E-value=0.012 Score=61.27 Aligned_cols=89 Identities=22% Similarity=0.301 Sum_probs=66.1
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc-------CHHHHh-ccCCEEEEecCCC-ccc
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV-------SFDEAI-ATADFISLHMPLT-PAT 265 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~-------~l~ell-~~aDvV~l~~Pl~-~~t 265 (600)
.|++|.|+|.|.||...++.++.+|++|++.++.. ..+.++++|...+ ++.+.+ ...|+|+-+++.+ +.+
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~~~~ 258 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDID 258 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCSTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCcHHH
Confidence 47899999999999999999999999999998766 5667778887432 222222 4689999988752 111
Q ss_pred cccccHhHhccCCCceEEEEccC
Q 007512 266 SKVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 266 ~~li~~~~l~~mk~gailvNvar 288 (600)
-...+..|+++..++.++.
T Consensus 259 ----~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 259 ----FNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp ----TTTGGGGEEEEEEEEECCC
T ss_pred ----HHHHHHHhcCCCEEEEecC
Confidence 2345667889999998875
No 288
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=95.89 E-value=0.007 Score=63.32 Aligned_cols=64 Identities=14% Similarity=0.246 Sum_probs=48.0
Q ss_pred CEEEEEecChhHHH-HHHHhhcC-CCEEEE-ECCCCChhHHHHc-CCc-ccCHHHHhc--cCCEEEEecCCC
Q 007512 198 KTLAVLGFGKVGSE-VARRAKGL-GMHVIA-HDPYAPADRARAI-GVD-LVSFDEAIA--TADFISLHMPLT 262 (600)
Q Consensus 198 ktiGIIGlG~IG~~-vA~~l~~~-g~~V~~-~d~~~~~~~a~~~-g~~-~~~l~ell~--~aDvV~l~~Pl~ 262 (600)
.+|||||+|.||+. .++.++.. ++++.+ +|++... .+... ++. +.+++++++ +.|+|++|+|..
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~-~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 76 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEE-VKRDFPDAEVVHELEEITNDPAIELVIVTTPSG 76 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHH-HHHHCTTSEEESSTHHHHTCTTCCEEEECSCTT
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH-HHhhCCCCceECCHHHHhcCCCCCEEEEcCCcH
Confidence 48999999999997 78888766 788864 6876522 33344 444 358999998 789999999943
No 289
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=95.86 E-value=0.0065 Score=64.25 Aligned_cols=64 Identities=16% Similarity=0.297 Sum_probs=50.2
Q ss_pred CEEEEEecC-hhHHHHHHHhhcC-CCEEEE-ECCCCCh--hHHHHcCCc-ccCHHHHhcc--CCEEEEecCC
Q 007512 198 KTLAVLGFG-KVGSEVARRAKGL-GMHVIA-HDPYAPA--DRARAIGVD-LVSFDEAIAT--ADFISLHMPL 261 (600)
Q Consensus 198 ktiGIIGlG-~IG~~vA~~l~~~-g~~V~~-~d~~~~~--~~a~~~g~~-~~~l~ell~~--aDvV~l~~Pl 261 (600)
.+|||||+| .+|...+..++.. ++++.+ +|++... ..+.+.|+. +.++++++++ .|+|++++|.
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~ 74 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPH 74 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCG
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCc
Confidence 479999999 9999999999865 678774 7887522 334566776 4589999975 9999999993
No 290
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=95.86 E-value=0.019 Score=59.24 Aligned_cols=64 Identities=14% Similarity=0.196 Sum_probs=48.3
Q ss_pred CEEEEEecChhHH-HHHHHhhcCCCEEE-EECCCCC--hhHHHHc-CCc-ccCHHHHhc--cCCEEEEecCC
Q 007512 198 KTLAVLGFGKVGS-EVARRAKGLGMHVI-AHDPYAP--ADRARAI-GVD-LVSFDEAIA--TADFISLHMPL 261 (600)
Q Consensus 198 ktiGIIGlG~IG~-~vA~~l~~~g~~V~-~~d~~~~--~~~a~~~-g~~-~~~l~ell~--~aDvV~l~~Pl 261 (600)
.+|||||+|.+|. .+++.++..++++. ++|++.. ...+... +.. +.+++++++ +.|+|++|+|.
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 76 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIP 76 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCG
T ss_pred cEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCCh
Confidence 4899999999996 67777776688875 5788763 2344555 443 458999997 69999999993
No 291
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=95.86 E-value=0.021 Score=56.80 Aligned_cols=80 Identities=14% Similarity=0.167 Sum_probs=53.8
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEE-ECCCCChhHHHHcCCcc-cCHHHHhccCCEEEEecCCCccccccccHhHhc
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIA-HDPYAPADRARAIGVDL-VSFDEAIATADFISLHMPLTPATSKVLNDETFG 275 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~-~d~~~~~~~a~~~g~~~-~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~ 275 (600)
.+|+|+|+|+||+.+++.+...+.++.+ +|+.... ..|+.. .++++++ ++|+|+-+++ ...+. +.+.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~----~~gv~v~~dl~~l~-~~DVvIDft~-p~a~~-----~~~~ 72 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA----TTPYQQYQHIADVK-GADVAIDFSN-PNLLF-----PLLD 72 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC------CCSCBCSCTTTCT-TCSEEEECSC-HHHHH-----HHHT
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc----cCCCceeCCHHHHh-CCCEEEEeCC-hHHHH-----HHHH
Confidence 5899999999999999999866447765 7876542 356654 3788888 9999884443 11122 2233
Q ss_pred cCCCceEEEEccCC
Q 007512 276 KMKKGVRIINVARG 289 (600)
Q Consensus 276 ~mk~gailvNvarg 289 (600)
++.|.-+|-...|
T Consensus 73 -l~~g~~vVigTTG 85 (243)
T 3qy9_A 73 -EDFHLPLVVATTG 85 (243)
T ss_dssp -SCCCCCEEECCCS
T ss_pred -HhcCCceEeCCCC
Confidence 6777766654444
No 292
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=95.85 E-value=0.013 Score=61.06 Aligned_cols=65 Identities=23% Similarity=0.370 Sum_probs=47.0
Q ss_pred CEEEEEecChhHHHHHHHhhcC-CCEEEE-ECCCCC--hhHHHHcCCc-------------------ccCHHHHhccCCE
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL-GMHVIA-HDPYAP--ADRARAIGVD-------------------LVSFDEAIATADF 254 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~-g~~V~~-~d~~~~--~~~a~~~g~~-------------------~~~l~ell~~aDv 254 (600)
.+|||+|+|.||+.+++.+... ++++.+ +|+... ...++..|+. ..++++++.++|+
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vDv 82 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI 82 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCCE
Confidence 3799999999999999999865 678766 465432 1223344421 1368888889999
Q ss_pred EEEecCCC
Q 007512 255 ISLHMPLT 262 (600)
Q Consensus 255 V~l~~Pl~ 262 (600)
|+.|+|..
T Consensus 83 V~~aTp~~ 90 (334)
T 2czc_A 83 IVDATPGG 90 (334)
T ss_dssp EEECCSTT
T ss_pred EEECCCcc
Confidence 99999944
No 293
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=95.83 E-value=0.086 Score=54.49 Aligned_cols=127 Identities=12% Similarity=0.016 Sum_probs=81.4
Q ss_pred HHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccc-eeccCCEEEE-----EecChhHHHH
Q 007512 139 AATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVG-VSLVGKTLAV-----LGFGKVGSEV 212 (600)
Q Consensus 139 aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g-~~l~gktiGI-----IGlG~IG~~v 212 (600)
.|+..+|+|+|+-+...-++ .+++=++.+.++ .| ..+. .+|++ +|=+++..+.
T Consensus 130 lA~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~------------------~g~~~l~-l~ia~a~~~~vGD~rva~Sl 188 (324)
T 1js1_X 130 FIQHSGRPVFSMEAATRHPL--QSFADLITIEEY------------------KKTARPK-VVMTWAPHPRPLPQAVPNSF 188 (324)
T ss_dssp HHHHSSSCEEESSCSSCCHH--HHHHHHHHHHHH------------------CSSSSCE-EEEECCCCSSCCCSHHHHHH
T ss_pred HHhhCCCCEEECCCCCCCcH--HHHHHHHHHHHH------------------cCCCCee-EEEEEEcccccCCcchHHHH
Confidence 34456799999876554444 344444444432 12 1356 79999 9999999999
Q ss_pred HHHhhcCCCEEEEECCCC-ChhHHHHcCCcc-cCHHHHhccCCEEEEecCCC--c---------cccccccHhHhccCCC
Q 007512 213 ARRAKGLGMHVIAHDPYA-PADRARAIGVDL-VSFDEAIATADFISLHMPLT--P---------ATSKVLNDETFGKMKK 279 (600)
Q Consensus 213 A~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~-~~l~ell~~aDvV~l~~Pl~--~---------~t~~li~~~~l~~mk~ 279 (600)
+..+..+|++|....|.. ........++.. .++++++++||+|..-.=.. . .....++.+.++.+|
T Consensus 189 ~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~w~s~g~~~~~~~~~r~~~y~vt~e~l~~a~- 267 (324)
T 1js1_X 189 AEWMNATDYEFVITHPEGYELDPKFVGNARVEYDQMKAFEGADFIYAKNWAAYTGDNYGQILSTDRNWTVGDRQMAVTN- 267 (324)
T ss_dssp HHHHHTSSSEEEEECCTTCCCCHHHHTTCEEESCHHHHHTTCSEEEECCCCCCSTTCTTCCCCCCTTSSBCHHHHTTSS-
T ss_pred HHHHHHCCCEEEEeCCcccCCChhhccceEEECCHHHHhCCCCEEEecCcccCCCccccchHHHhcCcccCHHHHHhcC-
Confidence 999999999999998854 221111134543 48999999999998833211 0 012344556666565
Q ss_pred ceEEEEcc
Q 007512 280 GVRIINVA 287 (600)
Q Consensus 280 gailvNva 287 (600)
+++|.-|.
T Consensus 268 ~ai~MHcL 275 (324)
T 1js1_X 268 NAYFMHCL 275 (324)
T ss_dssp SCEEECCS
T ss_pred CcEEECCC
Confidence 66666664
No 294
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=95.80 E-value=0.007 Score=64.40 Aligned_cols=63 Identities=19% Similarity=0.333 Sum_probs=48.2
Q ss_pred EEEEEecChhHHHHHHHhhcC---------CCEEEE-ECCCCC--hhHHHHcCCc--ccCHHHHhc--cCCEEEEecCC
Q 007512 199 TLAVLGFGKVGSEVARRAKGL---------GMHVIA-HDPYAP--ADRARAIGVD--LVSFDEAIA--TADFISLHMPL 261 (600)
Q Consensus 199 tiGIIGlG~IG~~vA~~l~~~---------g~~V~~-~d~~~~--~~~a~~~g~~--~~~l~ell~--~aDvV~l~~Pl 261 (600)
+|||||+|.||+.-++.++.. +.+|.+ +|++.. ...+.+.|+. +.+++++++ +.|+|++|+|.
T Consensus 28 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp~ 106 (412)
T 4gqa_A 28 NIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSPN 106 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCCc
Confidence 899999999999988888643 457765 688762 2345667774 458999996 58999999993
No 295
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=95.78 E-value=0.0047 Score=60.42 Aligned_cols=64 Identities=16% Similarity=0.267 Sum_probs=41.6
Q ss_pred CEEEEEecChhHHHHHHH--hhcCCCEEEE-ECCCCChhHHHHcCCc---ccCHHHHhccCCEEEEecCC
Q 007512 198 KTLAVLGFGKVGSEVARR--AKGLGMHVIA-HDPYAPADRARAIGVD---LVSFDEAIATADFISLHMPL 261 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~--l~~~g~~V~~-~d~~~~~~~a~~~g~~---~~~l~ell~~aDvV~l~~Pl 261 (600)
++++|||.|.+|+.+++. ....|+++.+ +|.++......-.|+. ..++++++++.|++++|+|.
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvPs 155 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVPA 155 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecCc
Confidence 469999999999999994 3355888876 5665532111112322 34688888777999999994
No 296
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=95.77 E-value=0.029 Score=60.45 Aligned_cols=87 Identities=21% Similarity=0.277 Sum_probs=65.1
Q ss_pred eccCCEEEEEecC----------hhHHHHHHHhhcC-CCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCC
Q 007512 194 SLVGKTLAVLGFG----------KVGSEVARRAKGL-GMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLT 262 (600)
Q Consensus 194 ~l~gktiGIIGlG----------~IG~~vA~~l~~~-g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~ 262 (600)
.+.|++|+|+|+- .-...+++.|... |.+|.+|||....+ ....++++.++.||+|+++++-.
T Consensus 312 ~~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~~g~~V~~~DP~~~~~------~~~~~~~~~~~~ad~vvi~t~~~ 385 (431)
T 3ojo_A 312 ALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD------FVEHDMSHAVKDASLVLILSDHS 385 (431)
T ss_dssp HSSCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHSTTCEEEEECSSCCCT------TBCSTTHHHHTTCSEEEECSCCG
T ss_pred hcCCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhhcCCEEEEECCCcccc------cccCCHHHHHhCCCEEEEecCCH
Confidence 4789999999985 2367899999988 99999999998542 23457889999999999999833
Q ss_pred ccccccccHhHhccCCCceEEEEccCCc
Q 007512 263 PATSKVLNDETFGKMKKGVRIINVARGG 290 (600)
Q Consensus 263 ~~t~~li~~~~l~~mk~gailvNvarg~ 290 (600)
+-+. ++-+.+..|+ +.+|+|+ |+-
T Consensus 386 -~f~~-~d~~~~~~~~-~~~i~D~-r~~ 409 (431)
T 3ojo_A 386 -EFKN-LSDSHFDKMK-HKVIFDT-KNV 409 (431)
T ss_dssp -GGTS-CCGGGGTTCS-SCEEEES-SCC
T ss_pred -HHhc-cCHHHHHhCC-CCEEEEC-CCC
Confidence 3333 3444456676 6789995 443
No 297
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=95.75 E-value=0.015 Score=59.34 Aligned_cols=102 Identities=20% Similarity=0.303 Sum_probs=64.2
Q ss_pred CCEEEEEec-ChhHHHHHHHhhcCCCEEE-EECCCCChhHHHHcCCcc-cCHHHHhc--cCCEEEEecCCCccccccccH
Q 007512 197 GKTLAVLGF-GKVGSEVARRAKGLGMHVI-AHDPYAPADRARAIGVDL-VSFDEAIA--TADFISLHMPLTPATSKVLND 271 (600)
Q Consensus 197 gktiGIIGl-G~IG~~vA~~l~~~g~~V~-~~d~~~~~~~a~~~g~~~-~~l~ell~--~aDvV~l~~Pl~~~t~~li~~ 271 (600)
..+|+|+|+ |++|+.+++.++..|++++ .+||..... ...|+.. .+++++.. ..|++++++|. +.....+.+
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~--~~~G~~vy~sl~el~~~~~~D~viI~tP~-~~~~~~~~e 83 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGT--THLGLPVFNTVREAVAATGATASVIYVPA-PFCKDSILE 83 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC--EETTEEEESSHHHHHHHHCCCEEEECCCG-GGHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccc--eeCCeeccCCHHHHhhcCCCCEEEEecCH-HHHHHHHHH
Confidence 458999999 9999999999988888855 578753211 1346654 47999988 89999999993 333333322
Q ss_pred hHhccCCCceEEEEccCCcc-ccHHHHHHhHhcC
Q 007512 272 ETFGKMKKGVRIINVARGGV-IDEEALVRALDSG 304 (600)
Q Consensus 272 ~~l~~mk~gailvNvarg~i-vde~aL~~aL~~g 304 (600)
.++ ..... +|..+.|-- -+.+.+.++.++.
T Consensus 84 -a~~-~Gi~~-iVi~t~G~~~~~~~~l~~~A~~~ 114 (288)
T 2nu8_A 84 -AID-AGIKL-IITITEGIPTLDMLTVKVKLDEA 114 (288)
T ss_dssp -HHH-TTCSE-EEECCCCCCHHHHHHHHHHHHHH
T ss_pred -HHH-CCCCE-EEEECCCCCHHHHHHHHHHHHHc
Confidence 222 22222 333444422 2344677666653
No 298
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.74 E-value=0.0087 Score=64.74 Aligned_cols=110 Identities=18% Similarity=0.170 Sum_probs=69.5
Q ss_pred eccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-----hhHHHHcCCccc---CHHHHhcc-CCEEEEecCCCcc
Q 007512 194 SLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-----ADRARAIGVDLV---SFDEAIAT-ADFISLHMPLTPA 264 (600)
Q Consensus 194 ~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-----~~~a~~~g~~~~---~l~ell~~-aDvV~l~~Pl~~~ 264 (600)
++.||+|.|||+|..|.++|+.|+..|++|.++|.... .+...+.|++.. ..++++.+ +|+|++.--..+.
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi~~~ 85 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPYN 85 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTSCTT
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcCCCC
Confidence 56799999999999999999999999999999998541 123445687543 23456676 9999886332221
Q ss_pred c----------cccccHh-HhccCCCceEEEEcc-CCccccHHHHHHhHhc
Q 007512 265 T----------SKVLNDE-TFGKMKKGVRIINVA-RGGVIDEEALVRALDS 303 (600)
Q Consensus 265 t----------~~li~~~-~l~~mk~gailvNva-rg~ivde~aL~~aL~~ 303 (600)
. ..++.+- .+..+.+..+|-=+| .|+.-...-+...|+.
T Consensus 86 ~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~ 136 (451)
T 3lk7_A 86 NPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNA 136 (451)
T ss_dssp SHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHh
Confidence 1 1133332 333333333333333 5777555555555654
No 299
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=95.72 E-value=0.0085 Score=62.35 Aligned_cols=91 Identities=12% Similarity=0.048 Sum_probs=59.3
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCC--EEEEECCCCChhHHH----HcC--------Cc-ccCHHHHhccCCEEEEecC
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGM--HVIAHDPYAPADRAR----AIG--------VD-LVSFDEAIATADFISLHMP 260 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~--~V~~~d~~~~~~~a~----~~g--------~~-~~~l~ell~~aDvV~l~~P 260 (600)
..++|+|||.|.||..+|..+...|+ +|..+|......... +.+ +. ..+.++ +++||+|+++..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG 98 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAG 98 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCC
Confidence 56899999999999999999986666 999999864211111 001 11 125555 999999999876
Q ss_pred CCc---ccc-ccc--cH-------hHhccCCCceEEEEcc
Q 007512 261 LTP---ATS-KVL--ND-------ETFGKMKKGVRIINVA 287 (600)
Q Consensus 261 l~~---~t~-~li--~~-------~~l~~mk~gailvNva 287 (600)
... +++ .++ |. +.+.+..|++++++++
T Consensus 99 ~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt 138 (330)
T 3ldh_A 99 ARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP 138 (330)
T ss_dssp CCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence 322 122 112 11 1233457899999986
No 300
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=95.70 E-value=0.0071 Score=63.31 Aligned_cols=91 Identities=11% Similarity=0.050 Sum_probs=64.7
Q ss_pred eccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCC---C-hhHHHHcCCcccC---HHHHh----ccCCEEEEecCCC
Q 007512 194 SLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA---P-ADRARAIGVDLVS---FDEAI----ATADFISLHMPLT 262 (600)
Q Consensus 194 ~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~---~-~~~a~~~g~~~~~---l~ell----~~aDvV~l~~Pl~ 262 (600)
.+.|++|.|+|.|.||..+++.++.+|.+|++.++.. . .+.+++.|+..++ +.+.+ ...|+|+-++...
T Consensus 178 ~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 257 (366)
T 2cdc_A 178 TLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGAD 257 (366)
T ss_dssp SSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCCh
Confidence 5679999999999999999999999999999998765 2 3455667765331 11111 3478888888743
Q ss_pred ccccccccHhHhccCCCceEEEEccC
Q 007512 263 PATSKVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 263 ~~t~~li~~~~l~~mk~gailvNvar 288 (600)
... + ...+..|+++..+++++.
T Consensus 258 ~~~---~-~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 258 VNI---L-GNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp THH---H-HHHGGGEEEEEEEEECSC
T ss_pred HHH---H-HHHHHHHhcCCEEEEEec
Confidence 211 0 445667888888888864
No 301
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=95.69 E-value=0.0095 Score=61.23 Aligned_cols=63 Identities=14% Similarity=0.240 Sum_probs=44.7
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCC--EEEEECCCCC-hhHHHH---c---CCcc-cCHHHHhccCCEEEEecC
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGM--HVIAHDPYAP-ADRARA---I---GVDL-VSFDEAIATADFISLHMP 260 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~--~V~~~d~~~~-~~~a~~---~---g~~~-~~l~ell~~aDvV~l~~P 260 (600)
.++|+|||.|.+|..+|..+...|+ +|..||.... ...+.+ . .+.. .++ +.+++||+|+++..
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aag 86 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTVN 86 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcCC
Confidence 3799999999999999999876666 9999998752 111111 1 1222 366 67899999999974
No 302
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=95.67 E-value=0.014 Score=59.63 Aligned_cols=94 Identities=18% Similarity=0.090 Sum_probs=62.6
Q ss_pred CEEEEEecChhHHHHHHHhhcCCC--EEEEECCCCChhH--H----HH---c--CC--cc-cCHHHHhccCCEEEEecCC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGM--HVIAHDPYAPADR--A----RA---I--GV--DL-VSFDEAIATADFISLHMPL 261 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~--~V~~~d~~~~~~~--a----~~---~--g~--~~-~~l~ell~~aDvV~l~~Pl 261 (600)
++|+|||.|.+|.++|..|...|. +|..||....... + .. . .. .. .+ .+.+++||+|+++.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence 479999999999999999986666 9999998752211 1 10 1 11 11 25 7889999999999874
Q ss_pred Ccccccc-----c--cH-------hHhccCCCceEEEEccCCccccHH
Q 007512 262 TPATSKV-----L--ND-------ETFGKMKKGVRIINVARGGVIDEE 295 (600)
Q Consensus 262 ~~~t~~l-----i--~~-------~~l~~mk~gailvNvarg~ivde~ 295 (600)
. ...++ + |. +.+.+..|++++++++ ..+|.-
T Consensus 80 ~-~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs--NPvd~~ 124 (294)
T 1oju_A 80 A-RKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDVM 124 (294)
T ss_dssp C-CCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHHH
T ss_pred C-CCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC--CcchHH
Confidence 3 22222 1 11 1244467899999997 455643
No 303
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.67 E-value=0.017 Score=63.07 Aligned_cols=98 Identities=24% Similarity=0.336 Sum_probs=70.0
Q ss_pred ceeccCCEEEEEecCh----------hHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCcc-cCHHHHhccCCEEEEecC
Q 007512 192 GVSLVGKTLAVLGFGK----------VGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDL-VSFDEAIATADFISLHMP 260 (600)
Q Consensus 192 g~~l~gktiGIIGlG~----------IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~-~~l~ell~~aDvV~l~~P 260 (600)
+..+.|++|+|+|+-- =...+++.|...|.+|.+|||+.... ..+.+ .++++.++.||+|+++++
T Consensus 348 ~~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~~----~~~~~~~~~~~~~~~ad~vvi~t~ 423 (478)
T 3g79_A 348 GKKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVNY----PGVEISDNLEEVVRNADAIVVLAG 423 (478)
T ss_dssp TCCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCCB----TTBCEESCHHHHHTTCSEEEECSC
T ss_pred ccCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCcccc----cCcceecCHHHHHhcCCEEEEecC
Confidence 4578999999999852 35789999999999999999997521 11222 478999999999999988
Q ss_pred CCccccccccHh-HhccCC-CceEEEEccCCccccHHHH
Q 007512 261 LTPATSKVLNDE-TFGKMK-KGVRIINVARGGVIDEEAL 297 (600)
Q Consensus 261 l~~~t~~li~~~-~l~~mk-~gailvNvarg~ivde~aL 297 (600)
-++-+. ++-+ ....|+ +..+|+|+ |+- .|.+.+
T Consensus 424 -~~~f~~-~d~~~~~~~~~~~~~~i~D~-rn~-~~~~~~ 458 (478)
T 3g79_A 424 -HSAYSS-LKADWAKKVSAKANPVIIDG-RNV-IEPDEF 458 (478)
T ss_dssp -CHHHHS-CCHHHHHHHHCCSSCEEEES-SSC-SCHHHH
T ss_pred -CHHHHh-hhHHHHHHHhccCCCEEEEC-CCC-CCHHHH
Confidence 333333 3433 334577 47899995 544 465554
No 304
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=95.67 E-value=0.0082 Score=62.82 Aligned_cols=62 Identities=16% Similarity=0.170 Sum_probs=47.4
Q ss_pred CEEEEEecChhHHH-HHHHhhcC-CCEEEE-ECCCCChhHHHHc-CCc-ccCHHHHhcc--CCEEEEecC
Q 007512 198 KTLAVLGFGKVGSE-VARRAKGL-GMHVIA-HDPYAPADRARAI-GVD-LVSFDEAIAT--ADFISLHMP 260 (600)
Q Consensus 198 ktiGIIGlG~IG~~-vA~~l~~~-g~~V~~-~d~~~~~~~a~~~-g~~-~~~l~ell~~--aDvV~l~~P 260 (600)
.+|||||+|.||+. .+..++.. ++++.+ +|++... .+.+. ++. +.++++++++ .|+|++|+|
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~-~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 74 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKEL-SKERYPQASIVRSFKELTEDPEIDLIVVNTP 74 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCG-GGTTCTTSEEESCSHHHHTCTTCCEEEECSC
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH-HHHhCCCCceECCHHHHhcCCCCCEEEEeCC
Confidence 48999999999997 77777766 788864 7887643 23334 443 3589999987 999999999
No 305
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=95.66 E-value=0.013 Score=59.95 Aligned_cols=53 Identities=9% Similarity=0.026 Sum_probs=45.5
Q ss_pred CccEEEEEecCCCCChhhHHhhhhcCCccccceEeeeecCCCcEEEEEEeCCC
Q 007512 525 EGSIILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVAPRKHAVMAIGVDEQ 577 (600)
Q Consensus 525 ~~~~Liv~~~D~pG~Ia~V~~iL~~~~INIa~m~v~R~~~g~~al~~i~~D~~ 577 (600)
..+.|.+..+|+||+|+.|++.|+++|+||..++..-....+.-+|+++++.+
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~ 61 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHAT 61 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEEC
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEcc
Confidence 34677888999999999999999999999999998865667778888887754
No 306
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=95.65 E-value=0.0095 Score=61.86 Aligned_cols=64 Identities=17% Similarity=0.201 Sum_probs=45.6
Q ss_pred CEEEEEecChhHHH-HHH-Hhhc-CCCEEE-EECCCCCh-hHHHH-cCCc-ccCHHHHhcc--CCEEEEecCC
Q 007512 198 KTLAVLGFGKVGSE-VAR-RAKG-LGMHVI-AHDPYAPA-DRARA-IGVD-LVSFDEAIAT--ADFISLHMPL 261 (600)
Q Consensus 198 ktiGIIGlG~IG~~-vA~-~l~~-~g~~V~-~~d~~~~~-~~a~~-~g~~-~~~l~ell~~--aDvV~l~~Pl 261 (600)
.+|||||+|.||+. .+. .++. -++++. ++|++... +.+.+ .++. +.++++++.+ .|+|++|+|.
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 75 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHA 75 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCG
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCCh
Confidence 47999999999996 455 4354 378887 58887643 22222 2444 3589999986 8999999993
No 307
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=95.64 E-value=0.052 Score=58.47 Aligned_cols=95 Identities=17% Similarity=0.224 Sum_probs=61.7
Q ss_pred ceeccCCEEEEEecChhHHHHHHHhhcCCCEEEE--------ECCCC-ChhH------------------HHHcCCcccC
Q 007512 192 GVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIA--------HDPYA-PADR------------------ARAIGVDLVS 244 (600)
Q Consensus 192 g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~--------~d~~~-~~~~------------------a~~~g~~~~~ 244 (600)
+..+.|+|+.|=|+|++|..+|+.|...|.+|++ |||.- +.+. +.+.|..+++
T Consensus 230 ~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~~ 309 (450)
T 4fcc_A 230 GMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYLE 309 (450)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEEE
T ss_pred CCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEec
Confidence 4578999999999999999999999999999987 45543 2221 1122333332
Q ss_pred HHHHh-ccCCEEEEecCCCccccccccHhHhccCCCc--eEEEEccCCcc
Q 007512 245 FDEAI-ATADFISLHMPLTPATSKVLNDETFGKMKKG--VRIINVARGGV 291 (600)
Q Consensus 245 l~ell-~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~g--ailvNvarg~i 291 (600)
-++++ -.||+.+=|.- .+.|+.+....++.+ .++++-+-+.+
T Consensus 310 ~~~i~~~~~DI~iPcAl-----~~~I~~~~a~~L~a~g~k~IaEgAN~p~ 354 (450)
T 4fcc_A 310 GQQPWSVPVDIALPCAT-----QNELDVDAAHQLIANGVKAVAEGANMPT 354 (450)
T ss_dssp TCCGGGSCCSEEEECSC-----TTCBCHHHHHHHHHTTCCEEECCSSSCB
T ss_pred CcccccCCccEEeeccc-----cccccHHHHHHHHhcCceEEecCCCCCC
Confidence 23332 35887776653 445777766666532 35666666665
No 308
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=95.64 E-value=0.016 Score=59.89 Aligned_cols=94 Identities=16% Similarity=0.090 Sum_probs=60.1
Q ss_pred CCEEEEEecChhHHHHHHHhhcCC--CEEEEECCCCChhH--HHH--c-------CCcc-cCHHHHhccCCEEEEecCCC
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLG--MHVIAHDPYAPADR--ARA--I-------GVDL-VSFDEAIATADFISLHMPLT 262 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g--~~V~~~d~~~~~~~--a~~--~-------g~~~-~~l~ell~~aDvV~l~~Pl~ 262 (600)
..+|+|||.|.+|.++|..+...| -+|..||....... +.. . .+.. .+..+.++.||+|+++++..
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag~~ 85 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGAA 85 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCCCC
Confidence 469999999999999999987555 48999997642111 111 1 1111 14467799999999999853
Q ss_pred ccccccc-------cH-------hHhccCCCceEEEEccCCcccc
Q 007512 263 PATSKVL-------ND-------ETFGKMKKGVRIINVARGGVID 293 (600)
Q Consensus 263 ~~t~~li-------~~-------~~l~~mk~gailvNvarg~ivd 293 (600)
. ..+.- |. +.+....|++++++++ ..+|
T Consensus 86 ~-~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t--NPv~ 127 (317)
T 3d0o_A 86 Q-KPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT--NPVD 127 (317)
T ss_dssp C-CTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS--SSHH
T ss_pred C-CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec--CcHH
Confidence 2 22210 11 1233347899999975 4444
No 309
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=95.62 E-value=0.092 Score=53.92 Aligned_cols=98 Identities=16% Similarity=0.245 Sum_probs=68.4
Q ss_pred HHhCCceeecCC-CCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEec---ChhHHHHHHH
Q 007512 140 ATEFGCLVVNAP-TANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGF---GKVGSEVARR 215 (600)
Q Consensus 140 a~~~GI~V~n~p-~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGl---G~IG~~vA~~ 215 (600)
|...+|+|+|+- |...-++ .+++=++.+.++ .| .+.|.+|++||= |++..+.+..
T Consensus 114 A~~~~vPVINag~g~~~HPt--Q~LaDl~Ti~e~------------------~g-~l~glkva~vGD~~~~rva~Sl~~~ 172 (306)
T 4ekn_B 114 SEYSQVPIINAGDGSNQHPT--QTLLDLYTIMRE------------------IG-RIDGIKIAFVGDLKYGRTVHSLVYA 172 (306)
T ss_dssp HHHCSSCEEESCSSSSCCHH--HHHHHHHHHHHH------------------HS-CSTTCEEEEESCTTTCHHHHHHHHH
T ss_pred HHhCCCCEEeCCCCCCcCcH--HHHHHHHHHHHH------------------hC-CcCCCEEEEEcCCCCCcHHHHHHHH
Confidence 445678999985 4443333 333333333331 12 478999999998 4899999999
Q ss_pred hhcC-CCEEEEECCCC---Ch---hHHHHcCCcc---cCHHHHhccCCEEEEe
Q 007512 216 AKGL-GMHVIAHDPYA---PA---DRARAIGVDL---VSFDEAIATADFISLH 258 (600)
Q Consensus 216 l~~~-g~~V~~~d~~~---~~---~~a~~~g~~~---~~l~ell~~aDvV~l~ 258 (600)
+..+ |++|....|.. +. +.+.+.|... .++++.+++||+|..-
T Consensus 173 ~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~ 225 (306)
T 4ekn_B 173 LSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVT 225 (306)
T ss_dssp HHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCGGGCCTTCSEEEEC
T ss_pred HHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEeC
Confidence 9999 99999988753 22 2345566653 4899999999999874
No 310
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=95.61 E-value=0.025 Score=58.60 Aligned_cols=92 Identities=17% Similarity=0.239 Sum_probs=59.3
Q ss_pred ccCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCCChhH--H----HH-----cCCc--c-cCHHHHhccCCEEEEec
Q 007512 195 LVGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYAPADR--A----RA-----IGVD--L-VSFDEAIATADFISLHM 259 (600)
Q Consensus 195 l~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~~~~~--a----~~-----~g~~--~-~~l~ell~~aDvV~l~~ 259 (600)
...++|+|||.|.+|..+|..+...|+ +|..||....... + .. .... . .+. +.+++||+|+++.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaa 83 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTA 83 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECC
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEcc
Confidence 346799999999999999999987777 9999998764321 1 10 1222 1 244 7899999999998
Q ss_pred CCCcccccc-----c--cHh-------HhccCCCceEEEEccC
Q 007512 260 PLTPATSKV-----L--NDE-------TFGKMKKGVRIINVAR 288 (600)
Q Consensus 260 Pl~~~t~~l-----i--~~~-------~l~~mk~gailvNvar 288 (600)
+.. ...++ + |.. .+....|++++++++-
T Consensus 84 g~p-~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN 125 (324)
T 3gvi_A 84 GVP-RKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN 125 (324)
T ss_dssp SCC-CC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CcC-CCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence 632 22222 1 111 1222357889888863
No 311
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=95.60 E-value=0.018 Score=59.14 Aligned_cols=63 Identities=17% Similarity=0.306 Sum_probs=47.4
Q ss_pred CEEEEEec-ChhHHHHHHHhhcCCCEEEE-ECCCCChhHH-HHc-CCc-ccCHHHHh----------ccCCEEEEecC
Q 007512 198 KTLAVLGF-GKVGSEVARRAKGLGMHVIA-HDPYAPADRA-RAI-GVD-LVSFDEAI----------ATADFISLHMP 260 (600)
Q Consensus 198 ktiGIIGl-G~IG~~vA~~l~~~g~~V~~-~d~~~~~~~a-~~~-g~~-~~~l~ell----------~~aDvV~l~~P 260 (600)
.++||||+ |.||+..++.++..+.++.+ +|++.....+ ... +.. +.++++++ ++.|+|++|+|
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP 81 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASP 81 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSC
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCC
Confidence 58999999 78999999999988888764 7887643222 222 233 34788887 67999999999
No 312
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=95.57 E-value=0.1 Score=54.62 Aligned_cols=138 Identities=17% Similarity=0.155 Sum_probs=83.0
Q ss_pred HHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccc---cccccceeccCCEEEEEecC-hhHHHHHH
Q 007512 139 AATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQ---RNKYVGVSLVGKTLAVLGFG-KVGSEVAR 214 (600)
Q Consensus 139 aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~---~~~~~g~~l~gktiGIIGlG-~IG~~vA~ 214 (600)
.|...+|+|+|+-+...-++ .+++=++.+.+++ |.+. .....+..|.|.+|++||=+ ++..+++.
T Consensus 138 lA~~s~vPVINag~d~~HPt--QaLaDl~TI~E~~---------G~~~~~~~~~~~~~~l~glkva~vGD~~nva~Sl~~ 206 (353)
T 3sds_A 138 LAKHSSVPVINALCDTFHPL--QAIADFLTIHESF---------ASQSATHGTHPSSLGLEGLKIAWVGDANNVLFDLAI 206 (353)
T ss_dssp HHHHCSSCEEEEECSSCCHH--HHHHHHHHHHHHT---------C--------CTTCCSCTTCEEEEESCCCHHHHHHHH
T ss_pred HHhhCCCCEEECCCCCCCcH--HHHHHHHHHHHHh---------CCCcccccccccccccCCCEEEEECCCchHHHHHHH
Confidence 34557899999854433332 3333344444422 2110 00112345899999999976 57888888
Q ss_pred HhhcCCCEEEEECCCC---Chh---HHHHc------CC--c-ccCHHHHhccCCEEEEec--CCCcc----------ccc
Q 007512 215 RAKGLGMHVIAHDPYA---PAD---RARAI------GV--D-LVSFDEAIATADFISLHM--PLTPA----------TSK 267 (600)
Q Consensus 215 ~l~~~g~~V~~~d~~~---~~~---~a~~~------g~--~-~~~l~ell~~aDvV~l~~--Pl~~~----------t~~ 267 (600)
.+..+|++|....|.. +.+ .+++. |. . ..++++.+++||+|..-+ +...+ ...
T Consensus 207 ~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~aDVvytd~w~smg~E~~~~~r~~~~~~y 286 (353)
T 3sds_A 207 AATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTTVPEVAVKDADVIVTDTWISMGQETEKIKRLEAFKDF 286 (353)
T ss_dssp HHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEESCHHHHTTTCSEEEECCC--------CHHHHHHTTTC
T ss_pred HHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEECCHHHHhcCCCEEEeCCccCCchhhHHHHHHHHhhCc
Confidence 8889999999988753 222 12221 32 2 248999999999998743 22221 113
Q ss_pred cccHhHhcc--CCCceEEEEcc
Q 007512 268 VLNDETFGK--MKKGVRIINVA 287 (600)
Q Consensus 268 li~~~~l~~--mk~gailvNva 287 (600)
-++.+.++. +|++++|.-|.
T Consensus 287 ~vt~ell~~~~ak~~ai~MHcL 308 (353)
T 3sds_A 287 KVTSELAKRGGAKENWKFMHCL 308 (353)
T ss_dssp CBCHHHHHHHTCCTTCEEEECS
T ss_pred eecHHHHhhcccCCCcEEECCC
Confidence 467777776 77888887775
No 313
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=95.56 E-value=0.015 Score=60.73 Aligned_cols=85 Identities=19% Similarity=0.223 Sum_probs=53.9
Q ss_pred CEEEEEe-cChhHHHHHHHhhcC-CCEEEEECCCCChh--HHH----H---cCCcccCHHHHhccCCEEEEecCCCcccc
Q 007512 198 KTLAVLG-FGKVGSEVARRAKGL-GMHVIAHDPYAPAD--RAR----A---IGVDLVSFDEAIATADFISLHMPLTPATS 266 (600)
Q Consensus 198 ktiGIIG-lG~IG~~vA~~l~~~-g~~V~~~d~~~~~~--~a~----~---~g~~~~~l~ell~~aDvV~l~~Pl~~~t~ 266 (600)
.+|||+| .|.||+.+.+.|... .+++.+.....+.. ... - ..+...++++ +..+|+|++|+|... +.
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g~~~-s~ 82 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALPHGV-FA 82 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCCTTH-HH
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCCcHH-HH
Confidence 5899999 899999999999866 46877653322111 110 0 1122234444 578999999999553 22
Q ss_pred ccccHhHhccCCCceEEEEccC
Q 007512 267 KVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 267 ~li~~~~l~~mk~gailvNvar 288 (600)
.+.. ..++.|+.+|+.+.
T Consensus 83 ~~a~----~~~~aG~~VId~Sa 100 (345)
T 2ozp_A 83 REFD----RYSALAPVLVDLSA 100 (345)
T ss_dssp HTHH----HHHTTCSEEEECSS
T ss_pred HHHH----HHHHCCCEEEEcCc
Confidence 2221 12467889999875
No 314
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=95.56 E-value=0.13 Score=53.87 Aligned_cols=130 Identities=20% Similarity=0.242 Sum_probs=85.6
Q ss_pred HHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecC--hhHHHHHHHh
Q 007512 139 AATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFG--KVGSEVARRA 216 (600)
Q Consensus 139 aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG--~IG~~vA~~l 216 (600)
.+...+|+|.|.-|...-++ .+++=++.+.+ .+.+..+.|.+|++||=| ++..+.+..+
T Consensus 142 la~~s~vPVING~g~~~HPt--QaL~Dl~Ti~e-----------------~~~~~~l~gl~ia~vGD~~~~va~S~~~~~ 202 (358)
T 4h31_A 142 LGAFAGVPVWNGLTDEFHPT--QILADFLTMLE-----------------HSQGKALADIQFAYLGDARNNVGNSLMVGA 202 (358)
T ss_dssp HHHHSSSCEEESCCSSCCHH--HHHHHHHHHHH-----------------TTTTCCGGGCEEEEESCTTSHHHHHHHHHH
T ss_pred hhhhccCceECCCCcCCCch--HHHHHHHHHHH-----------------HhcCCCcCceEEEecCCCCcccchHHHHHH
Confidence 44556789999666544443 23333443332 122457889999999954 7999999999
Q ss_pred hcCCCEEEEECCCC---Chh-------HHHHcCCcc---cCHHHHhccCCEEEEecCCC----cc---------cccccc
Q 007512 217 KGLGMHVIAHDPYA---PAD-------RARAIGVDL---VSFDEAIATADFISLHMPLT----PA---------TSKVLN 270 (600)
Q Consensus 217 ~~~g~~V~~~d~~~---~~~-------~a~~~g~~~---~~l~ell~~aDvV~l~~Pl~----~~---------t~~li~ 270 (600)
..+|++|..+.|.. +.+ .+.+.|... .++++.+++||+|..-.=.. ++ ...-++
T Consensus 203 ~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~s~~~~~~~~~~~~~~~~~y~v~ 282 (358)
T 4h31_A 203 AKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYTDVWVSMGESPEAWDERVALMKPYQVN 282 (358)
T ss_dssp HHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHHGGGCBC
T ss_pred HhcCceEEEeCCcccCCCHHHHHHHHHHHHHcCCcceeccCHHHHhccCcEEEEEEEEEcccCchhHHHHHHHHhCcccC
Confidence 99999999998743 221 133445432 38999999999998532211 11 113367
Q ss_pred HhHhcc-CCCceEEEEcc
Q 007512 271 DETFGK-MKKGVRIINVA 287 (600)
Q Consensus 271 ~~~l~~-mk~gailvNva 287 (600)
.+.+++ .||+++|.-|.
T Consensus 283 ~~~l~~~ak~~~i~mH~L 300 (358)
T 4h31_A 283 MNVLKQTGNPNVKFMHCL 300 (358)
T ss_dssp HHHHHHTTCTTCEEEECS
T ss_pred HHHHHhcCCCCcEEECCC
Confidence 777765 47899999885
No 315
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=95.54 E-value=0.015 Score=60.13 Aligned_cols=93 Identities=14% Similarity=0.114 Sum_probs=58.3
Q ss_pred CEEEEEecChhHHHHHHHhhcCCC--EEEEECCCCChhH--HHHc--C------Ccc-cCHHHHhccCCEEEEecCCCcc
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGM--HVIAHDPYAPADR--ARAI--G------VDL-VSFDEAIATADFISLHMPLTPA 264 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~--~V~~~d~~~~~~~--a~~~--g------~~~-~~l~ell~~aDvV~l~~Pl~~~ 264 (600)
.+|+|||.|.+|.+++..+...+. ++..||....... +.++ . +.. .+..+.++.||+|+++.+...
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~~- 84 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAPQ- 84 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC---
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCCC-
Confidence 689999999999999999985554 8999998642111 1111 1 111 144677999999999997532
Q ss_pred cccc-------ccH-------hHhccCCCceEEEEccCCcccc
Q 007512 265 TSKV-------LND-------ETFGKMKKGVRIINVARGGVID 293 (600)
Q Consensus 265 t~~l-------i~~-------~~l~~mk~gailvNvarg~ivd 293 (600)
..++ .|. +.+....|+++++++ +..+|
T Consensus 85 ~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~--tNPv~ 125 (318)
T 1ez4_A 85 KPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA--ANPVD 125 (318)
T ss_dssp --------CHHHHHHHHHHHHHHHHHTTCCSEEEEC--SSSHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe--CCcHH
Confidence 2221 011 123334789999997 44445
No 316
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=95.53 E-value=0.011 Score=62.67 Aligned_cols=64 Identities=19% Similarity=0.195 Sum_probs=50.0
Q ss_pred CCEEEEEecCh---hHHHHHHHhhcC-CCEEEE--ECCCCC--hhHHHHcCCc----ccCHHHHhcc-------CCEEEE
Q 007512 197 GKTLAVLGFGK---VGSEVARRAKGL-GMHVIA--HDPYAP--ADRARAIGVD----LVSFDEAIAT-------ADFISL 257 (600)
Q Consensus 197 gktiGIIGlG~---IG~~vA~~l~~~-g~~V~~--~d~~~~--~~~a~~~g~~----~~~l~ell~~-------aDvV~l 257 (600)
-.+|||||+|. ||+..+..++.. ++++.+ +|++.. ...+.+.|+. +.++++++.+ .|+|++
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~i 91 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVSI 91 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEEE
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEEE
Confidence 35899999999 999999888765 478774 688762 2345667873 3489999975 999999
Q ss_pred ecC
Q 007512 258 HMP 260 (600)
Q Consensus 258 ~~P 260 (600)
|+|
T Consensus 92 ~tp 94 (398)
T 3dty_A 92 ATP 94 (398)
T ss_dssp ESC
T ss_pred CCC
Confidence 999
No 317
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=95.53 E-value=0.015 Score=60.38 Aligned_cols=94 Identities=14% Similarity=0.084 Sum_probs=58.7
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCC--EEEEECCCCChhH--HHH--cC------Ccc-cCHHHHhccCCEEEEecCCCc
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGM--HVIAHDPYAPADR--ARA--IG------VDL-VSFDEAIATADFISLHMPLTP 263 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~--~V~~~d~~~~~~~--a~~--~g------~~~-~~l~ell~~aDvV~l~~Pl~~ 263 (600)
.++|+|||.|.+|.+++..+...++ ++..||....... +.+ .. +.. .+..+.++.||+|+++.+...
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~~ 88 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAPQ 88 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 3699999999999999999875554 8999998642111 111 11 111 144677999999999997532
Q ss_pred ccccc-------ccHh-------HhccCCCceEEEEccCCcccc
Q 007512 264 ATSKV-------LNDE-------TFGKMKKGVRIINVARGGVID 293 (600)
Q Consensus 264 ~t~~l-------i~~~-------~l~~mk~gailvNvarg~ivd 293 (600)
..++ .|.. .+.+..|+++++++ +..+|
T Consensus 89 -k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~--tNPv~ 129 (326)
T 2zqz_A 89 -KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA--ANPVD 129 (326)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC--SSSHH
T ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe--CCcHH
Confidence 2222 0111 12223689999998 44455
No 318
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.51 E-value=0.018 Score=60.47 Aligned_cols=88 Identities=25% Similarity=0.357 Sum_probs=64.4
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc----C---HHHHhccCCEEEEecCCCccccc
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV----S---FDEAIATADFISLHMPLTPATSK 267 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~----~---l~ell~~aDvV~l~~Pl~~~t~~ 267 (600)
.|.+|.|+|.|.||...++.++.+|.+|++.+++. ..+.++++|...+ + ++++....|+|+-++....
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~---- 269 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPH---- 269 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCC----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHH----
Confidence 48899999999999999999999999999998765 4566777886432 1 2223346788888876322
Q ss_pred cccHhHhccCCCceEEEEccC
Q 007512 268 VLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 268 li~~~~l~~mk~gailvNvar 288 (600)
.-...+..|+++..++.++.
T Consensus 270 -~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 270 -NLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp -CHHHHHTTEEEEEEEEECCC
T ss_pred -HHHHHHHHhccCCEEEEecc
Confidence 12345667888888888764
No 319
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=95.51 E-value=0.012 Score=62.09 Aligned_cols=63 Identities=22% Similarity=0.415 Sum_probs=46.4
Q ss_pred eccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcC--C---ccc---CHHHHhccCCEEEE
Q 007512 194 SLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIG--V---DLV---SFDEAIATADFISL 257 (600)
Q Consensus 194 ~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g--~---~~~---~l~ell~~aDvV~l 257 (600)
.+.+++|+|+|.|.+|+.+++.++.+|++|+++|++.... +.... . .+. .+.++++++|+|+.
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p-~~~~ad~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCP-CRYVAHEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCT-TGGGSSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCh-hhhhCCEEEECCCCCHHHHHHHHHhCCccee
Confidence 4679999999999999999999999999999999876321 11110 0 111 25667788998754
No 320
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=95.51 E-value=0.019 Score=59.15 Aligned_cols=63 Identities=19% Similarity=0.332 Sum_probs=47.0
Q ss_pred CEEEEEec-ChhHHHHHHHhhcCCCEEEE-ECCCCChhHH-HHc-CCc-ccCHHHHh-----------ccCCEEEEecC
Q 007512 198 KTLAVLGF-GKVGSEVARRAKGLGMHVIA-HDPYAPADRA-RAI-GVD-LVSFDEAI-----------ATADFISLHMP 260 (600)
Q Consensus 198 ktiGIIGl-G~IG~~vA~~l~~~g~~V~~-~d~~~~~~~a-~~~-g~~-~~~l~ell-----------~~aDvV~l~~P 260 (600)
.++||||+ |.||...++.++..+.++.+ +|++.....+ ... +.. +.++++++ ++.|+|++|+|
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP 82 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSP 82 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSC
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCC
Confidence 58999999 79999999999988888765 7887643222 222 233 34788876 57899999998
No 321
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=95.49 E-value=0.013 Score=61.46 Aligned_cols=69 Identities=17% Similarity=0.248 Sum_probs=46.9
Q ss_pred eeccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHHcC----Ccc---cCHHHHhccCCEEEEecCCC
Q 007512 193 VSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRARAIG----VDL---VSFDEAIATADFISLHMPLT 262 (600)
Q Consensus 193 ~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~~g----~~~---~~l~ell~~aDvV~l~~Pl~ 262 (600)
.+-+.++|+|+|.|.+|+.+|+.|.. ..+|.+.|.... .+.+.+.. +.. .++.++++++|+|+.|+|..
T Consensus 12 ~~g~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~ 88 (365)
T 3abi_A 12 IEGRHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGF 88 (365)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred ccCCccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc
Confidence 34455689999999999999999975 468888887652 22222211 111 24678899999999999943
No 322
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.47 E-value=0.024 Score=54.88 Aligned_cols=71 Identities=23% Similarity=0.278 Sum_probs=50.0
Q ss_pred ceeccCCEEEEEec-ChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHHcCC-cc------cCHHHHhccCCEEEEecCCC
Q 007512 192 GVSLVGKTLAVLGF-GKVGSEVARRAKGLGMHVIAHDPYAP-ADRARAIGV-DL------VSFDEAIATADFISLHMPLT 262 (600)
Q Consensus 192 g~~l~gktiGIIGl-G~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~~g~-~~------~~l~ell~~aDvV~l~~Pl~ 262 (600)
-..+.||+|.|.|. |.||+.+++.|...|++|++.++... .+.....++ .. .++.+.+..+|+|+.+....
T Consensus 16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~ 95 (236)
T 3e8x_A 16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGSG 95 (236)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCC
T ss_pred ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCC
Confidence 35789999999997 99999999999999999999988763 223333355 32 23456777888888777643
No 323
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.46 E-value=0.034 Score=58.18 Aligned_cols=88 Identities=23% Similarity=0.276 Sum_probs=63.0
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCC-ChhHHHHcCCcc-c-------CHHHHhc-----cCCEEEEecC
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYA-PADRARAIGVDL-V-------SFDEAIA-----TADFISLHMP 260 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~-~~~~a~~~g~~~-~-------~l~ell~-----~aDvV~l~~P 260 (600)
.|++|.|+|.|.||...++.++.+|. +|++.|+.. ..+.++++|+.. . ++.+.+. ..|+|+-++.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 271 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 271 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCC
Confidence 48899999999999999999999999 899999776 456677788642 1 2333222 3788888776
Q ss_pred CCccccccccHhHhccCCCc-eEEEEccC
Q 007512 261 LTPATSKVLNDETFGKMKKG-VRIINVAR 288 (600)
Q Consensus 261 l~~~t~~li~~~~l~~mk~g-ailvNvar 288 (600)
..+ + -...+..++++ ..++.++-
T Consensus 272 ~~~-~----~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 272 NVG-V----MRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp CHH-H----HHHHHHTBCTTTCEEEECSC
T ss_pred CHH-H----HHHHHHHhhcCCcEEEEEcC
Confidence 321 1 23456667887 77777763
No 324
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.45 E-value=0.031 Score=56.39 Aligned_cols=97 Identities=19% Similarity=0.302 Sum_probs=63.9
Q ss_pred ceeccCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCCChh--HHHHcC-----CcccCHHHHhccCCEEEEecCCCc
Q 007512 192 GVSLVGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYAPAD--RARAIG-----VDLVSFDEAIATADFISLHMPLTP 263 (600)
Q Consensus 192 g~~l~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~~~~--~a~~~g-----~~~~~l~ell~~aDvV~l~~Pl~~ 263 (600)
|.++.|+++.|+|.|-.+++++..|...|. +|..+++..... .+...+ .......+.++++|+|+.++|+.-
T Consensus 120 g~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~Gm 199 (269)
T 3tum_A 120 GFEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPVGM 199 (269)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSSTTC
T ss_pred CCCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccCCcccc
Confidence 457789999999999999999999998885 899998865221 111111 111223344678999999999642
Q ss_pred c--ccccccHhHhccCCCceEEEEccC
Q 007512 264 A--TSKVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 264 ~--t~~li~~~~l~~mk~gailvNvar 288 (600)
. ...-++...++.++++.++.|+--
T Consensus 200 ~~~~~~p~~~~~~~~l~~~~~v~D~vY 226 (269)
T 3tum_A 200 GTRAELPLSAALLATLQPDTLVADVVT 226 (269)
T ss_dssp STTCCCSSCHHHHHTCCTTSEEEECCC
T ss_pred CCCCCCCCChHHHhccCCCcEEEEEcc
Confidence 1 111245555666666666666653
No 325
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.44 E-value=0.12 Score=55.70 Aligned_cols=107 Identities=20% Similarity=0.263 Sum_probs=69.8
Q ss_pred ceeccCCEEEEEecChhHHHHHHHhhcCCCEEEE--------ECCCC-ChhHHH----HcC-------CcccCHHHHhc-
Q 007512 192 GVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIA--------HDPYA-PADRAR----AIG-------VDLVSFDEAIA- 250 (600)
Q Consensus 192 g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~--------~d~~~-~~~~a~----~~g-------~~~~~l~ell~- 250 (600)
|.++.|+++.|.|+|.+|+.+|+.|...|.+|++ |||.- +.+... +.| .+.++.++++.
T Consensus 230 g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~~ 309 (440)
T 3aog_A 230 GLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWGL 309 (440)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTTC
T ss_pred CCCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhcC
Confidence 5579999999999999999999999999999984 33432 222211 122 23345566653
Q ss_pred cCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 251 TADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 251 ~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
.||+++-|.+- +.++.+....++ -.+|+-.+-+++- .++- +.|.+..|
T Consensus 310 ~~DIlvPcA~~-----n~i~~~na~~l~-ak~VvEgAN~p~t-~eA~-~iL~~~GI 357 (440)
T 3aog_A 310 PVEFLVPAALE-----KQITEQNAWRIR-ARIVAEGANGPTT-PAAD-DILLEKGV 357 (440)
T ss_dssp CCSEEEECSSS-----SCBCTTTGGGCC-CSEEECCSSSCBC-HHHH-HHHHHHTC
T ss_pred CCcEEEecCCc-----CccchhhHHHcC-CcEEEecCccccC-HHHH-HHHHHCCC
Confidence 79999998763 346666666663 4466666777763 3332 33444333
No 326
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=95.44 E-value=0.0094 Score=62.17 Aligned_cols=63 Identities=10% Similarity=0.192 Sum_probs=46.6
Q ss_pred CEEEEEecChhHHHHHHHhhcC--------CCEEE-EECCCCC--hhHHHHcCCc--ccCHHHHhc--cCCEEEEecC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL--------GMHVI-AHDPYAP--ADRARAIGVD--LVSFDEAIA--TADFISLHMP 260 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~--------g~~V~-~~d~~~~--~~~a~~~g~~--~~~l~ell~--~aDvV~l~~P 260 (600)
-+|||||+|.||+.-++.++.. +.+|. ++|++.. ...+.+.|+. +.+++++++ +.|+|++|+|
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP 84 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTP 84 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSC
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 3799999999999888777642 23665 4688762 2345567774 458999996 4899999999
No 327
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=95.44 E-value=0.015 Score=60.24 Aligned_cols=63 Identities=19% Similarity=0.309 Sum_probs=48.7
Q ss_pred CEEEEEecC-hhHHHHHHHhhcC--CCEEE-EECCCCCh--hHHHHcCC-c-ccCHHHHhc--cCCEEEEecC
Q 007512 198 KTLAVLGFG-KVGSEVARRAKGL--GMHVI-AHDPYAPA--DRARAIGV-D-LVSFDEAIA--TADFISLHMP 260 (600)
Q Consensus 198 ktiGIIGlG-~IG~~vA~~l~~~--g~~V~-~~d~~~~~--~~a~~~g~-~-~~~l~ell~--~aDvV~l~~P 260 (600)
.+|||||+| .+|+..++.++.. ++++. ++|++... ..+.+.|+ . +.+++++++ +.|+|++|+|
T Consensus 19 irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 91 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLP 91 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCC
T ss_pred eeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 489999999 8999999999876 57775 57887622 23445566 3 458999986 5899999998
No 328
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=95.42 E-value=0.0092 Score=60.93 Aligned_cols=52 Identities=13% Similarity=0.137 Sum_probs=44.1
Q ss_pred CccEEEEEecCCCCChhhHHhhhhcCCccccceEeeeecCCCcEEEEEEeCC
Q 007512 525 EGSIILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVAPRKHAVMAIGVDE 576 (600)
Q Consensus 525 ~~~~Liv~~~D~pG~Ia~V~~iL~~~~INIa~m~v~R~~~g~~al~~i~~D~ 576 (600)
..+.|.+..+|+||+|+.|++.|+++|+||..++.......+.-+|+++++-
T Consensus 5 ~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~ 56 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNA 56 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEE
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEc
Confidence 3456788899999999999999999999999999876566777788887764
No 329
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=95.41 E-value=0.014 Score=61.27 Aligned_cols=86 Identities=19% Similarity=0.111 Sum_probs=51.5
Q ss_pred CEEEEEe-cChhHHHHHHHhhcC-CCEEEEE--CCCCC-hhHHHHcC---------------CcccCHHHHhc-cCCEEE
Q 007512 198 KTLAVLG-FGKVGSEVARRAKGL-GMHVIAH--DPYAP-ADRARAIG---------------VDLVSFDEAIA-TADFIS 256 (600)
Q Consensus 198 ktiGIIG-lG~IG~~vA~~l~~~-g~~V~~~--d~~~~-~~~a~~~g---------------~~~~~l~ell~-~aDvV~ 256 (600)
.+|||+| .|.||+.+++.|... +++|.+. ++... .......+ +...+++++++ .+|+|+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~ 88 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDIVF 88 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTTCCEEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCCCCEEE
Confidence 5899999 999999999999866 4788765 33221 11111111 11124555556 899999
Q ss_pred EecCCCccccccccHhHhccCCCceEEEEccC
Q 007512 257 LHMPLTPATSKVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 257 l~~Pl~~~t~~li~~~~l~~mk~gailvNvar 288 (600)
+|+|... +..+. . ..++.|+.+||.+.
T Consensus 89 ~atp~~~-~~~~a-~---~~~~aG~~VId~s~ 115 (354)
T 1ys4_A 89 SALPSDL-AKKFE-P---EFAKEGKLIFSNAS 115 (354)
T ss_dssp ECCCHHH-HHHHH-H---HHHHTTCEEEECCS
T ss_pred ECCCchH-HHHHH-H---HHHHCCCEEEECCc
Confidence 9998332 22111 1 11346777777753
No 330
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=95.36 E-value=0.017 Score=60.52 Aligned_cols=95 Identities=17% Similarity=0.147 Sum_probs=59.1
Q ss_pred CEEEEEe-cChhHHHHHHHhhcCC------CEEEEEC-CC-CC--hhH----HHH-cCCcc--cCHHHHhccCCEEEEec
Q 007512 198 KTLAVLG-FGKVGSEVARRAKGLG------MHVIAHD-PY-AP--ADR----ARA-IGVDL--VSFDEAIATADFISLHM 259 (600)
Q Consensus 198 ktiGIIG-lG~IG~~vA~~l~~~g------~~V~~~d-~~-~~--~~~----a~~-~g~~~--~~l~ell~~aDvV~l~~ 259 (600)
.+|+|+| .|.+|+.+.+.|...+ .++..+. +. .. ... ... ..+.. .+. +.+..+|+|++|+
T Consensus 10 ~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~-~~~~~~DvVf~al 88 (352)
T 2nqt_A 10 TKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEA-AVLGGHDAVFLAL 88 (352)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCH-HHHTTCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCH-HHhcCCCEEEECC
Confidence 5899999 9999999999998765 4776653 22 11 110 000 11111 233 3466899999999
Q ss_pred CCCccccccccHhHhccCCCceEEEEccCCccccHHHHHH
Q 007512 260 PLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVR 299 (600)
Q Consensus 260 Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~ 299 (600)
|... ..+....++.|+.+||.+..--.+..+.++
T Consensus 89 g~~~------s~~~~~~~~~G~~vIDlSa~~R~~~~~~~~ 122 (352)
T 2nqt_A 89 PHGH------SAVLAQQLSPETLIIDCGADFRLTDAAVWE 122 (352)
T ss_dssp TTSC------CHHHHHHSCTTSEEEECSSTTTCSCHHHHH
T ss_pred CCcc------hHHHHHHHhCCCEEEEECCCccCCcchhhh
Confidence 9553 344444446789999998544444434443
No 331
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.36 E-value=0.036 Score=57.98 Aligned_cols=87 Identities=24% Similarity=0.275 Sum_probs=60.1
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCC-ChhHHHHcCCcc-cC-------HHHHhc-----cCCEEEEecC
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYA-PADRARAIGVDL-VS-------FDEAIA-----TADFISLHMP 260 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~-~~~~a~~~g~~~-~~-------l~ell~-----~aDvV~l~~P 260 (600)
.|++|.|+|.|.||...++.++.+|. +|++.++.. ..+.++++|... .+ +.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 270 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 270 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCC
Confidence 47899999999999999999999999 899999776 456677778642 11 222222 3677777765
Q ss_pred CCccccccccHhHhccCCCc-eEEEEcc
Q 007512 261 LTPATSKVLNDETFGKMKKG-VRIINVA 287 (600)
Q Consensus 261 l~~~t~~li~~~~l~~mk~g-ailvNva 287 (600)
..+ + -...+..++++ ..++.++
T Consensus 271 ~~~-~----~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 271 RLD-T----MVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp CHH-H----HHHHHHHBCTTTCEEEECS
T ss_pred CHH-H----HHHHHHHhhcCCcEEEEec
Confidence 211 1 13445567777 6777665
No 332
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=95.36 E-value=0.014 Score=61.75 Aligned_cols=64 Identities=14% Similarity=0.209 Sum_probs=50.7
Q ss_pred CCEEEEEecChhHHHHHHHhhcC--CCEEEE-ECCCC--ChhHHHHcCCcc-cCHHHHhccCCEEEEecCC
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGL--GMHVIA-HDPYA--PADRARAIGVDL-VSFDEAIATADFISLHMPL 261 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~--g~~V~~-~d~~~--~~~~a~~~g~~~-~~l~ell~~aDvV~l~~Pl 261 (600)
-.+|||||.| +|+.-++.++.. ++++.+ +|+.. ....+.+.|+.. .++++++.+.|++++++|.
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~ 76 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRS 76 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC-
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCC
Confidence 3589999999 699888888765 688875 68876 234567788864 5899999999999999993
No 333
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=95.33 E-value=0.27 Score=51.48 Aligned_cols=128 Identities=19% Similarity=0.107 Sum_probs=83.1
Q ss_pred hHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccce-eccCCE--EEEEec---C--hhH
Q 007512 138 AAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGV-SLVGKT--LAVLGF---G--KVG 209 (600)
Q Consensus 138 ~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~-~l~gkt--iGIIGl---G--~IG 209 (600)
..|+..+|+|+|+-... -++ .+++=++.+.++ .|. .+.|++ |+++|= | ++.
T Consensus 151 ~lA~~~~vPVINag~g~-HPt--QaLaDl~TI~E~------------------~g~~~l~glkvvva~vGDl~~~~nrva 209 (359)
T 1zq6_A 151 SFAKYSPVPVINMETIT-HPC--QELAHALALQEH------------------FGTPDLRGKKYVLTWTYHPKPLNTAVA 209 (359)
T ss_dssp HHHHHCSSCEEESSSSC-CHH--HHHHHHHHHHHH------------------HTSSCCTTCEEEEEECCCSSCCCSHHH
T ss_pred HHHHhCCCCEEeCCCCC-CcH--HHHHHHHHHHHH------------------hCCCcccCCeeEEEEEecccccccchH
Confidence 34556789999987655 444 334434444331 132 278999 999997 3 899
Q ss_pred HHHHHHhhcCCCEEEEECCC-C---ChhH---H----HHcCCc---ccCHHHHhccCCEEEEecCCC-----cc------
Q 007512 210 SEVARRAKGLGMHVIAHDPY-A---PADR---A----RAIGVD---LVSFDEAIATADFISLHMPLT-----PA------ 264 (600)
Q Consensus 210 ~~vA~~l~~~g~~V~~~d~~-~---~~~~---a----~~~g~~---~~~l~ell~~aDvV~l~~Pl~-----~~------ 264 (600)
.+++..+..||++|....|. . +.+. + ++.|.. ..++++++++||+|..-.=.. ++
T Consensus 210 ~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvVyt~~w~se~~mg~~~~~~~~ 289 (359)
T 1zq6_A 210 NSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYAKSWGALPFFGNWEPEKPI 289 (359)
T ss_dssp HHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHHHHTTCSEEEEECCCCGGGTTCCTTHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEECCccccccCCcchhhHHH
Confidence 99999999999999999886 2 2221 1 244543 248999999999998754212 10
Q ss_pred ----ccccccHhHhccCCCceEEEEcc
Q 007512 265 ----TSKVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 265 ----t~~li~~~~l~~mk~gailvNva 287 (600)
....++.+.++.+| +++|.-|.
T Consensus 290 ~~~~~~y~vt~e~l~~a~-~ai~MHcL 315 (359)
T 1zq6_A 290 RDQYQHFIVDERKMALTN-NGVFSHCL 315 (359)
T ss_dssp HGGGGGGSBCHHHHHTSS-SCEEECCS
T ss_pred HHHhcCCCCCHHHHHhCC-CCEEECCC
Confidence 11234666666666 66666664
No 334
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.33 E-value=0.017 Score=59.74 Aligned_cols=88 Identities=22% Similarity=0.353 Sum_probs=62.0
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc------CHHHHh----ccCCEEEEecCCCcc
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV------SFDEAI----ATADFISLHMPLTPA 264 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~------~l~ell----~~aDvV~l~~Pl~~~ 264 (600)
.|++|.|+|.|.||..+++.++.+|++|++.+++. ..+.++++|...+ ++.+.+ ...|+|+-++...+
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~- 242 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKP- 242 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHH-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHH-
Confidence 37899999999999999999999999999999875 3455667776421 222222 35788887776322
Q ss_pred ccccccHhHhccCCCceEEEEccC
Q 007512 265 TSKVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 265 t~~li~~~~l~~mk~gailvNvar 288 (600)
.-...+..|+++..++.++.
T Consensus 243 ----~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 243 ----AFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp ----HHHHHHHHEEEEEEEEECCC
T ss_pred ----HHHHHHHHhhcCCEEEEecc
Confidence 12345566778888887764
No 335
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.32 E-value=0.042 Score=59.98 Aligned_cols=101 Identities=22% Similarity=0.278 Sum_probs=69.3
Q ss_pred ceeccCCEEEEEecCh----------hHHHHHHHhhcCCCEEEEECCCCChhHHHHcC------------Cccc-CHHHH
Q 007512 192 GVSLVGKTLAVLGFGK----------VGSEVARRAKGLGMHVIAHDPYAPADRARAIG------------VDLV-SFDEA 248 (600)
Q Consensus 192 g~~l~gktiGIIGlG~----------IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g------------~~~~-~l~el 248 (600)
+..+.|++|+|+|+-- =...+++.|...|.+|.+|||....+.....+ +.+. ++.+.
T Consensus 323 ~~~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (478)
T 2y0c_A 323 GEDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQA 402 (478)
T ss_dssp CSCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHTTTCHHHHTTEEECSSHHHH
T ss_pred cccCCCCEEEEEecccCCCCCccccChHHHHHHHHHHCCCEEEEECCCccHHHHHhhccccccccccccceeecCCHHHH
Confidence 4468999999999843 46789999999999999999997332112122 3433 67889
Q ss_pred hccCCEEEEecCCCccccccccHhHh-ccCCCceEEEEccCCccccHHHH
Q 007512 249 IATADFISLHMPLTPATSKVLNDETF-GKMKKGVRIINVARGGVIDEEAL 297 (600)
Q Consensus 249 l~~aDvV~l~~Pl~~~t~~li~~~~l-~~mk~gailvNvarg~ivde~aL 297 (600)
++.||+|++++.-. +-+. ++-+.+ ..|+ ..+|+|+ |+ +.+.+.+
T Consensus 403 ~~~ad~~vi~t~~~-~f~~-~~~~~~~~~~~-~~~i~D~-r~-~~~~~~~ 447 (478)
T 2y0c_A 403 ARDADALVIVTEWK-IFKS-PDFVALGRLWK-TPVIFDG-RN-LYEPETM 447 (478)
T ss_dssp TTTCSEEEECSCCG-GGGS-CCHHHHHTTCS-SCEEEES-SC-CSCHHHH
T ss_pred HhCCCEEEEecCCh-Hhhc-cCHHHHHhhcC-CCEEEEC-CC-CCCHHHH
Confidence 99999999999843 3333 344444 4455 4789997 43 3465543
No 336
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=95.30 E-value=0.013 Score=61.21 Aligned_cols=64 Identities=25% Similarity=0.335 Sum_probs=43.9
Q ss_pred EEEEEecChhHHHHHHHhhc-CCCEEEEE-CCCCCh--hHHHHc------------------CCcc-cCHHHHhccCCEE
Q 007512 199 TLAVLGFGKVGSEVARRAKG-LGMHVIAH-DPYAPA--DRARAI------------------GVDL-VSFDEAIATADFI 255 (600)
Q Consensus 199 tiGIIGlG~IG~~vA~~l~~-~g~~V~~~-d~~~~~--~~a~~~------------------g~~~-~~l~ell~~aDvV 255 (600)
+|||+|+|.||+.+++.+.. -++++.+. |..... ..+... ++.. .+.++++.++|+|
T Consensus 3 kVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vDvV 82 (337)
T 1cf2_P 3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADIV 82 (337)
T ss_dssp EEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSEE
T ss_pred EEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCCEE
Confidence 79999999999999999986 47888764 443221 112221 1111 1466777899999
Q ss_pred EEecCCC
Q 007512 256 SLHMPLT 262 (600)
Q Consensus 256 ~l~~Pl~ 262 (600)
+.|+|..
T Consensus 83 ~~atp~~ 89 (337)
T 1cf2_P 83 IDCTPEG 89 (337)
T ss_dssp EECCSTT
T ss_pred EECCCch
Confidence 9999944
No 337
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=95.30 E-value=0.0085 Score=58.39 Aligned_cols=63 Identities=16% Similarity=0.218 Sum_probs=43.7
Q ss_pred CEEEEEecChhHHHHHHHh--hcCCCEEEE-ECCCCChhHHHHcCCc---ccCHHHHhc-cCCEEEEecCC
Q 007512 198 KTLAVLGFGKVGSEVARRA--KGLGMHVIA-HDPYAPADRARAIGVD---LVSFDEAIA-TADFISLHMPL 261 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l--~~~g~~V~~-~d~~~~~~~a~~~g~~---~~~l~ell~-~aDvV~l~~Pl 261 (600)
++++|||.|.+|+.+++.+ .. |+++.+ +|.++........|+. ..+++++++ +.|.|++|+|.
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~ell~~~ID~ViIA~Ps 150 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPGRIEIALLTVPR 150 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTTTCCEEEECSCH
T ss_pred CEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcCCeeecHHhHHHHHHcCCCEEEEeCCc
Confidence 5799999999999999963 35 888877 5655422111112332 346888876 59999999993
No 338
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.27 E-value=0.035 Score=58.09 Aligned_cols=87 Identities=21% Similarity=0.205 Sum_probs=61.9
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCC-ChhHHHHcCCccc-C-------HHHHhc-----cCCEEEEecC
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYA-PADRARAIGVDLV-S-------FDEAIA-----TADFISLHMP 260 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~-~~~~a~~~g~~~~-~-------l~ell~-----~aDvV~l~~P 260 (600)
.|++|.|+|.|.||...++.++.+|. +|++.|+.. ..+.++++|+..+ + +.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g 270 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 270 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCC
Confidence 48899999999999999999999998 899999776 4567778887421 1 222222 4788887776
Q ss_pred CCccccccccHhHhccCCCc-eEEEEcc
Q 007512 261 LTPATSKVLNDETFGKMKKG-VRIINVA 287 (600)
Q Consensus 261 l~~~t~~li~~~~l~~mk~g-ailvNva 287 (600)
..+ + -...+..++++ ..++.++
T Consensus 271 ~~~-~----~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 271 RIE-T----MMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp CHH-H----HHHHHHTBCTTTCEEEECC
T ss_pred CHH-H----HHHHHHHHhcCCCEEEEEc
Confidence 211 1 13456667777 7777776
No 339
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.26 E-value=0.013 Score=60.85 Aligned_cols=87 Identities=20% Similarity=0.259 Sum_probs=57.2
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCC-ChhHHHHcCCccc------CHHHHhc------cCCEEEEecCC
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYA-PADRARAIGVDLV------SFDEAIA------TADFISLHMPL 261 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~-~~~~a~~~g~~~~------~l~ell~------~aDvV~l~~Pl 261 (600)
.|++|.|+|.|.||...++.++.+|. +|++.++.. ..+.+++.|...+ ++.+.+. ..|+|+-+++.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGA 246 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 68999999999999999999999999 999999875 3455666675321 2222111 36666666652
Q ss_pred CccccccccHhHhccCCCceEEEEcc
Q 007512 262 TPATSKVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 262 ~~~t~~li~~~~l~~mk~gailvNva 287 (600)
.+ + -...+..|+++..+++++
T Consensus 247 ~~-~----~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 247 PK-A----LEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp HH-H----HHHHHHHEEEEEEEEECC
T ss_pred HH-H----HHHHHHHHhcCCEEEEEc
Confidence 11 1 133344556666666665
No 340
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.25 E-value=0.032 Score=57.65 Aligned_cols=62 Identities=23% Similarity=0.254 Sum_probs=47.8
Q ss_pred CCEEEEEecChhHHH-HHHHhhcCCCEEEEECCCCCh---hHHHHcCCccc---CHHHHh-ccCCEEEEe
Q 007512 197 GKTLAVLGFGKVGSE-VARRAKGLGMHVIAHDPYAPA---DRARAIGVDLV---SFDEAI-ATADFISLH 258 (600)
Q Consensus 197 gktiGIIGlG~IG~~-vA~~l~~~g~~V~~~d~~~~~---~~a~~~g~~~~---~l~ell-~~aDvV~l~ 258 (600)
.|+|.|||+|.+|.+ +|+.|+..|++|.++|..... +...+.|+... +.+++. .++|+|+..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~S 73 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIG 73 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEEC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEEC
Confidence 578999999999996 999999999999999986522 23455687543 344555 579999885
No 341
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.25 E-value=0.043 Score=57.43 Aligned_cols=88 Identities=24% Similarity=0.218 Sum_probs=61.2
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCC-ChhHHHHcCCccc-C-------HHHHhc-----cCCEEEEecC
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYA-PADRARAIGVDLV-S-------FDEAIA-----TADFISLHMP 260 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~-~~~~a~~~g~~~~-~-------l~ell~-----~aDvV~l~~P 260 (600)
.|++|.|+|.|.||...++.++.+|. +|++.|+.. ..+.++++|+..+ + +.+.+. ..|+|+-++.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCC
Confidence 48899999999999999999999999 899999776 4566777886421 1 222222 3688877765
Q ss_pred CCccccccccHhHhccCCCc-eEEEEccC
Q 007512 261 LTPATSKVLNDETFGKMKKG-VRIINVAR 288 (600)
Q Consensus 261 l~~~t~~li~~~~l~~mk~g-ailvNvar 288 (600)
..+ + -...+..++++ ..++.++-
T Consensus 275 ~~~-~----~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 275 TAQ-T----LKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp CHH-H----HHHHHHTBCTTTCEEEECCC
T ss_pred CHH-H----HHHHHHHhhcCCCEEEEECC
Confidence 211 1 13455667777 77776653
No 342
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.21 E-value=0.015 Score=58.06 Aligned_cols=97 Identities=15% Similarity=0.240 Sum_probs=61.1
Q ss_pred HHHHHHcCccccccccceeccCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCC-Ch----------------hHH--
Q 007512 176 ADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYA-PA----------------DRA-- 235 (600)
Q Consensus 176 ~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~-~~----------------~~a-- 235 (600)
+.++++-..|... ....|++++|.|||+|.+|+.+|+.|...|. ++..+|+.. .. .++
T Consensus 9 y~Rq~~l~~~g~~--~q~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~ 86 (251)
T 1zud_1 9 YSRQILLDDIALD--GQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQV 86 (251)
T ss_dssp THHHHTSTTTHHH--HHHHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHH
T ss_pred hhhhcchhhcCHH--HHHHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHH
Confidence 3344444456432 1246899999999999999999999998886 788887643 10 011
Q ss_pred -----HHc--CCc--c-------cCHHHHhccCCEEEEecCCCccccccccHhHhc
Q 007512 236 -----RAI--GVD--L-------VSFDEAIATADFISLHMPLTPATSKVLNDETFG 275 (600)
Q Consensus 236 -----~~~--g~~--~-------~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~ 275 (600)
.+. +++ . .+++++++++|+|+.++. +.+++.++++....
T Consensus 87 ~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~r~~l~~~~~~ 141 (251)
T 1zud_1 87 SQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTD-NMATRQEINAACVA 141 (251)
T ss_dssp HHHHHHHHCTTSEEEEECSCCCHHHHHHHHHHCSEEEECCS-SHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEEeccCCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHH
Confidence 011 111 0 124566777888888776 55566666665443
No 343
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=95.21 E-value=0.017 Score=61.71 Aligned_cols=65 Identities=18% Similarity=0.285 Sum_probs=49.2
Q ss_pred CEEEEEecCh---hHHHHHHHhhcCC-CEEE--EECCCCC--hhHHHHcCCc----ccCHHHHhcc-------CCEEEEe
Q 007512 198 KTLAVLGFGK---VGSEVARRAKGLG-MHVI--AHDPYAP--ADRARAIGVD----LVSFDEAIAT-------ADFISLH 258 (600)
Q Consensus 198 ktiGIIGlG~---IG~~vA~~l~~~g-~~V~--~~d~~~~--~~~a~~~g~~----~~~l~ell~~-------aDvV~l~ 258 (600)
.+|||||+|. ||+..+..++..+ +++. ++|++.. ...+.+.|+. +.++++++++ .|+|++|
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I~ 117 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVAIV 117 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEEEC
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEEEC
Confidence 4899999999 9999988887654 7876 4688762 2345567873 3589999976 9999999
Q ss_pred cCCC
Q 007512 259 MPLT 262 (600)
Q Consensus 259 ~Pl~ 262 (600)
+|..
T Consensus 118 tp~~ 121 (417)
T 3v5n_A 118 TPNH 121 (417)
T ss_dssp SCTT
T ss_pred CCcH
Confidence 9943
No 344
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.20 E-value=0.023 Score=59.52 Aligned_cols=64 Identities=11% Similarity=0.104 Sum_probs=48.1
Q ss_pred CCEEEEEecChhHH-HHHHHhhcCCCEEEE-ECCCCC--hhHHHHcCC-c-ccCHHHHhcc--CCEEEEecC
Q 007512 197 GKTLAVLGFGKVGS-EVARRAKGLGMHVIA-HDPYAP--ADRARAIGV-D-LVSFDEAIAT--ADFISLHMP 260 (600)
Q Consensus 197 gktiGIIGlG~IG~-~vA~~l~~~g~~V~~-~d~~~~--~~~a~~~g~-~-~~~l~ell~~--aDvV~l~~P 260 (600)
-.+|||||+|.+|. .++..++.-++++.+ +|++.. ...+.+.|. . +.++++++.+ .|+|++|+|
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp 97 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAV 97 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCC
T ss_pred CcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 35899999999995 567777767888764 788762 233455663 3 4589999975 899999998
No 345
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.20 E-value=0.043 Score=51.95 Aligned_cols=65 Identities=15% Similarity=0.241 Sum_probs=47.4
Q ss_pred CEEEEEe-cChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCccc--CHH----HHhccCCEEEEecCCC
Q 007512 198 KTLAVLG-FGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLV--SFD----EAIATADFISLHMPLT 262 (600)
Q Consensus 198 ktiGIIG-lG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~--~l~----ell~~aDvV~l~~Pl~ 262 (600)
++|.|.| .|.||+.+++.|...|.+|++.++..........++..+ ++. +.+..+|+|+.+....
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~ 72 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGIS 72 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCHHHHTTCSEEEECCCSS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhhhhhcCCCEEEECCcCC
Confidence 4789999 599999999999999999999998763222111344321 222 6788899999888754
No 346
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=95.19 E-value=0.028 Score=57.27 Aligned_cols=53 Identities=9% Similarity=-0.003 Sum_probs=45.3
Q ss_pred CccEEEEEecCCCCChhhHHhhhhcCCccccceEeeeecCCCcEEEEEEeCCC
Q 007512 525 EGSIILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVAPRKHAVMAIGVDEQ 577 (600)
Q Consensus 525 ~~~~Liv~~~D~pG~Ia~V~~iL~~~~INIa~m~v~R~~~g~~al~~i~~D~~ 577 (600)
+.+.|.+..+|+||+|+.|++.|+++|+||..++..-....+.-+|+++++-+
T Consensus 7 ~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~ 59 (286)
T 3n0v_A 7 DTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQP 59 (286)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECC
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecC
Confidence 34678888999999999999999999999999998765667777888888754
No 347
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=95.18 E-value=0.021 Score=62.37 Aligned_cols=63 Identities=11% Similarity=0.202 Sum_probs=49.8
Q ss_pred CEEEEEec----ChhHHHHHHHhhcC--CCEEE-EECCCCCh--hHHHHcCCc----ccCHHHHhc--cCCEEEEecC
Q 007512 198 KTLAVLGF----GKVGSEVARRAKGL--GMHVI-AHDPYAPA--DRARAIGVD----LVSFDEAIA--TADFISLHMP 260 (600)
Q Consensus 198 ktiGIIGl----G~IG~~vA~~l~~~--g~~V~-~~d~~~~~--~~a~~~g~~----~~~l~ell~--~aDvV~l~~P 260 (600)
.+|||||+ |.||+..++.++.. ++++. ++|+.... ..+...|+. +.+++++++ +.|+|++|+|
T Consensus 40 irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp 117 (479)
T 2nvw_A 40 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVK 117 (479)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSC
T ss_pred CEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCC
Confidence 58999999 99999999999875 78876 57887522 234556764 458999995 6999999999
No 348
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=95.14 E-value=0.055 Score=56.15 Aligned_cols=106 Identities=17% Similarity=0.180 Sum_probs=66.6
Q ss_pred EEEEEecChhHHHHHHHhhc---------CCCEEEE-ECCCCC------hhH--HH--HcCCccc--CHHHHhc--cCCE
Q 007512 199 TLAVLGFGKVGSEVARRAKG---------LGMHVIA-HDPYAP------ADR--AR--AIGVDLV--SFDEAIA--TADF 254 (600)
Q Consensus 199 tiGIIGlG~IG~~vA~~l~~---------~g~~V~~-~d~~~~------~~~--a~--~~g~~~~--~l~ell~--~aDv 254 (600)
+|||||+|.||+.+++.++. .+.+|.+ +|++.. ... +. ..+..+. ++++++. +.|+
T Consensus 4 rvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~iDv 83 (327)
T 3do5_A 4 KIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADYDV 83 (327)
T ss_dssp EEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSCCSE
T ss_pred EEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCCCCE
Confidence 79999999999999999974 5778776 576531 111 11 1122222 8899885 5899
Q ss_pred EEEecCCCccccccccHhHhccCCCceEEEEccCCccc-cHHHHHHhHhcCC
Q 007512 255 ISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVI-DEEALVRALDSGR 305 (600)
Q Consensus 255 V~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~iv-de~aL~~aL~~g~ 305 (600)
|+.|+|....+.. .-+-....|+.|.-++-...+.+. ..+.|.++.++..
T Consensus 84 Vv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g 134 (327)
T 3do5_A 84 LIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNG 134 (327)
T ss_dssp EEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTT
T ss_pred EEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhC
Confidence 9999995432111 112234557888888877665554 4566666555543
No 349
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=95.12 E-value=0.023 Score=58.82 Aligned_cols=59 Identities=22% Similarity=0.352 Sum_probs=46.7
Q ss_pred CCEEEEEecChhHH-HHHHHhhcC-CCEEEE-ECCCCChhHHHHcCCc-ccCHHHHhcc---CCEEEEecC
Q 007512 197 GKTLAVLGFGKVGS-EVARRAKGL-GMHVIA-HDPYAPADRARAIGVD-LVSFDEAIAT---ADFISLHMP 260 (600)
Q Consensus 197 gktiGIIGlG~IG~-~vA~~l~~~-g~~V~~-~d~~~~~~~a~~~g~~-~~~l~ell~~---aDvV~l~~P 260 (600)
-.+|||||+|.||+ ..++.++.. +++|.+ +|++.. ..|+. +.++++++++ .|+|++|+|
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~-----~~g~~~~~~~~~ll~~~~~vD~V~i~tp 90 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGT-----VEGVNSYTTIEAMLDAEPSIDAVSLCMP 90 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCC-----CTTSEEESSHHHHHHHCTTCCEEEECSC
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChh-----hcCCCccCCHHHHHhCCCCCCEEEEeCC
Confidence 35899999999998 788888866 788765 687653 23565 4589999875 999999999
No 350
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=95.10 E-value=0.06 Score=58.75 Aligned_cols=101 Identities=18% Similarity=0.205 Sum_probs=70.3
Q ss_pred eccCCEEEEEecC----------hhHHHHHHHhhcCCCEEEEECCCCChhHH----HH-c-------CCcc-cCHHHHhc
Q 007512 194 SLVGKTLAVLGFG----------KVGSEVARRAKGLGMHVIAHDPYAPADRA----RA-I-------GVDL-VSFDEAIA 250 (600)
Q Consensus 194 ~l~gktiGIIGlG----------~IG~~vA~~l~~~g~~V~~~d~~~~~~~a----~~-~-------g~~~-~~l~ell~ 250 (600)
.+.|++|+|+|+- .-...+++.|...|.+|.+|||+.+.+.+ .. . .+.+ .++.+.++
T Consensus 332 ~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (481)
T 2o3j_A 332 TVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITVESDPYAAAR 411 (481)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEEESSHHHHHT
T ss_pred ccCCCeEEEEeeeeCCCCCccccChHHHHHHHHHHCCCEEEEECCCCCchhhHHHHHhhhccccccCceeecCCHHHHHc
Confidence 5899999999983 46778999999999999999999854321 11 1 1233 36788899
Q ss_pred cCCEEEEecCCCccccccccHhH-hccCCCceEEEEccCCccccHHHHH
Q 007512 251 TADFISLHMPLTPATSKVLNDET-FGKMKKGVRIINVARGGVIDEEALV 298 (600)
Q Consensus 251 ~aDvV~l~~Pl~~~t~~li~~~~-l~~mk~gailvNvarg~ivde~aL~ 298 (600)
.||+|++++.-. +-+. ++-+. ...|+...+|+|+ |+ ++|.+.+.
T Consensus 412 ~ad~~vi~t~~~-~f~~-~~~~~~~~~~~~~~~i~D~-r~-~~~~~~~~ 456 (481)
T 2o3j_A 412 GAHAIVVLTEWD-EFVE-LNYSQIHNDMQHPAAIFDG-RL-ILDQKALR 456 (481)
T ss_dssp TCSEEEECSCCG-GGTT-SCHHHHHHHSCSSCEEEES-SS-CSCHHHHH
T ss_pred CCCEEEEcCCcH-Hhhc-cCHHHHHHhcCCCCEEEEC-CC-CCCHHHHH
Confidence 999999999843 3333 34433 3457776688886 44 34655543
No 351
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=95.10 E-value=0.015 Score=62.69 Aligned_cols=63 Identities=11% Similarity=0.178 Sum_probs=49.8
Q ss_pred CEEEEEec----ChhHHHHHHHhhcC--CCEEE-EECCCCCh--hHHHHcCCc----ccCHHHHhc--cCCEEEEecC
Q 007512 198 KTLAVLGF----GKVGSEVARRAKGL--GMHVI-AHDPYAPA--DRARAIGVD----LVSFDEAIA--TADFISLHMP 260 (600)
Q Consensus 198 ktiGIIGl----G~IG~~vA~~l~~~--g~~V~-~~d~~~~~--~~a~~~g~~----~~~l~ell~--~aDvV~l~~P 260 (600)
.+|||||+ |.||+..++.++.. ++++. ++|++... ..+...|+. +.++++++. +.|+|++|+|
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp 98 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQ 98 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSC
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCC
Confidence 48999999 99999999999876 78875 57887532 234556764 458999996 6999999999
No 352
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=95.09 E-value=0.014 Score=59.31 Aligned_cols=61 Identities=20% Similarity=0.212 Sum_probs=46.5
Q ss_pred CEEEEEecChhHHHHHHHhhc----CCCEEEE-ECCCCChhHHHHcCCcccCHHHHhc--cCCEEEEecCC
Q 007512 198 KTLAVLGFGKVGSEVARRAKG----LGMHVIA-HDPYAPADRARAIGVDLVSFDEAIA--TADFISLHMPL 261 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~----~g~~V~~-~d~~~~~~~a~~~g~~~~~l~ell~--~aDvV~l~~Pl 261 (600)
.+|||||+|.||+..++.+.. -++++.+ +|+... +...|+...+++++++ +.|+|++|+|.
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~---a~~~g~~~~~~~ell~~~~vD~V~i~tp~ 75 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRREL---GSLDEVRQISLEDALRSQEIDVAYICSES 75 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCC---CEETTEEBCCHHHHHHCSSEEEEEECSCG
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHH---HHHcCCCCCCHHHHhcCCCCCEEEEeCCc
Confidence 479999999999999988875 3677764 676531 2234555678999986 68999999993
No 353
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=95.09 E-value=0.018 Score=62.30 Aligned_cols=67 Identities=19% Similarity=0.269 Sum_probs=48.7
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhHH--HHcC-C-----ccc---CHHHHhccCCEEEEecCCC
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRA--RAIG-V-----DLV---SFDEAIATADFISLHMPLT 262 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a--~~~g-~-----~~~---~l~ell~~aDvV~l~~Pl~ 262 (600)
.+++++|+|.|.||+.+++.|...|.+|.++|+....... ...+ + ... +++++++++|+|+.++|..
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT 79 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence 4789999999999999999999889999999986422111 1111 1 112 3557788999999999964
No 354
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.08 E-value=0.041 Score=57.48 Aligned_cols=87 Identities=23% Similarity=0.273 Sum_probs=61.5
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCC-ChhHHHHcCCcc-c-------CHHHHhc-----cCCEEEEecC
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYA-PADRARAIGVDL-V-------SFDEAIA-----TADFISLHMP 260 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~-~~~~a~~~g~~~-~-------~l~ell~-----~aDvV~l~~P 260 (600)
.|++|.|+|.|.||...++.++.+|. +|++.++.. ..+.++++|+.. + ++.+.+. ..|+|+-++.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g 269 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 269 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCC
Confidence 48899999999999999999999998 899999776 456677778642 1 1222222 3788887776
Q ss_pred CCccccccccHhHhccCCCc-eEEEEcc
Q 007512 261 LTPATSKVLNDETFGKMKKG-VRIINVA 287 (600)
Q Consensus 261 l~~~t~~li~~~~l~~mk~g-ailvNva 287 (600)
..+ + -...+..++++ ..++.++
T Consensus 270 ~~~-~----~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 270 NVK-V----MRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp CHH-H----HHHHHHTBCTTTCEEEECS
T ss_pred cHH-H----HHHHHHhhccCCcEEEEEe
Confidence 321 1 23456667777 7777775
No 355
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=95.08 E-value=0.37 Score=51.53 Aligned_cols=95 Identities=22% Similarity=0.309 Sum_probs=63.4
Q ss_pred cceeccCCEEEEEecChhHHHHHHHhhc-CCCEEEE--------ECCCC-ChhHHH----HcC-------CcccCHHHHh
Q 007512 191 VGVSLVGKTLAVLGFGKVGSEVARRAKG-LGMHVIA--------HDPYA-PADRAR----AIG-------VDLVSFDEAI 249 (600)
Q Consensus 191 ~g~~l~gktiGIIGlG~IG~~vA~~l~~-~g~~V~~--------~d~~~-~~~~a~----~~g-------~~~~~l~ell 249 (600)
.|.++.|+++.|.|+|.+|+..|+.|.. .|.+|++ |||.- +.+... +.| .+.++.++++
T Consensus 203 ~g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~~~eil 282 (415)
T 2tmg_A 203 LGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELL 282 (415)
T ss_dssp TTCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEECHHHHT
T ss_pred cCCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcCchhhh
Confidence 3568999999999999999999999998 9999984 34422 222111 112 1333455655
Q ss_pred -ccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCcc
Q 007512 250 -ATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGV 291 (600)
Q Consensus 250 -~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~i 291 (600)
..||+++-|.+- +.++.+....++ -.+|+-.+-+++
T Consensus 283 ~~~~DIliP~A~~-----n~i~~~~a~~l~-ak~V~EgAN~p~ 319 (415)
T 2tmg_A 283 ELDVDILVPAALE-----GAIHAGNAERIK-AKAVVEGANGPT 319 (415)
T ss_dssp TCSCSEEEECSST-----TSBCHHHHTTCC-CSEEECCSSSCB
T ss_pred cCCCcEEEecCCc-----CccCcccHHHcC-CeEEEeCCCccc
Confidence 478988888763 346666666663 345666666665
No 356
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=95.07 E-value=0.03 Score=60.33 Aligned_cols=64 Identities=16% Similarity=0.254 Sum_probs=47.9
Q ss_pred CEEEEEecChhHHHHHHHhhcC-CCEEE-EECCCCCh-hHH-H---HcCC---c-cc----CHHHHhc--cCCEEEEecC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL-GMHVI-AHDPYAPA-DRA-R---AIGV---D-LV----SFDEAIA--TADFISLHMP 260 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~-g~~V~-~~d~~~~~-~~a-~---~~g~---~-~~----~l~ell~--~aDvV~l~~P 260 (600)
.+|||||+|.||+..++.++.. ++++. ++|++... +.+ . +.|+ . +. +++++++ +.|+|++|+|
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 100 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSSP 100 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECCC
T ss_pred ceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcCC
Confidence 4899999999999999999876 78875 57887532 221 1 2353 3 34 8999997 5899999999
Q ss_pred C
Q 007512 261 L 261 (600)
Q Consensus 261 l 261 (600)
.
T Consensus 101 ~ 101 (444)
T 2ixa_A 101 W 101 (444)
T ss_dssp G
T ss_pred c
Confidence 3
No 357
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=95.06 E-value=0.025 Score=58.88 Aligned_cols=88 Identities=22% Similarity=0.303 Sum_probs=62.9
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHHH-HcCCccc----C---HHHHhccCCEEEEecCCCcccc
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRAR-AIGVDLV----S---FDEAIATADFISLHMPLTPATS 266 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~-~~g~~~~----~---l~ell~~aDvV~l~~Pl~~~t~ 266 (600)
.|.+|.|+|.|.||...++.++.+|.+|++.++... .+.+. ++|...+ + +.++....|+|+-++....
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~~--- 256 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHH--- 256 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSCC---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCChH---
Confidence 588999999999999999999999999999998764 34455 6776422 2 2223345788888876322
Q ss_pred ccccHhHhccCCCceEEEEccC
Q 007512 267 KVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 267 ~li~~~~l~~mk~gailvNvar 288 (600)
.-...+..++++..++.++.
T Consensus 257 --~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 257 --ALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp --CSHHHHTTEEEEEEEEECSC
T ss_pred --HHHHHHHHhccCCEEEEeCC
Confidence 12345666788888888763
No 358
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.04 E-value=0.02 Score=59.07 Aligned_cols=87 Identities=18% Similarity=0.260 Sum_probs=60.2
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc------CHHHHh----ccCCEEEEecCCCcc
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV------SFDEAI----ATADFISLHMPLTPA 264 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~------~l~ell----~~aDvV~l~~Pl~~~ 264 (600)
.|++|.|+|.|.||...++.++.+|.+|++.|+.. ..+.++++|...+ ++.+.+ ...|+|+.++...+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~- 244 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPK- 244 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHH-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHH-
Confidence 47899999999999999999999999999998866 4566777776421 222222 24677777665221
Q ss_pred ccccccHhHhccCCCceEEEEcc
Q 007512 265 TSKVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 265 t~~li~~~~l~~mk~gailvNva 287 (600)
.-...+..++++..++.++
T Consensus 245 ----~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 245 ----AFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp ----HHHHHHHHEEEEEEEEECS
T ss_pred ----HHHHHHHHhccCCEEEEeC
Confidence 1134455577777777765
No 359
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=95.03 E-value=0.025 Score=58.95 Aligned_cols=87 Identities=18% Similarity=0.321 Sum_probs=53.8
Q ss_pred CEEEEEecChhHHHHHHHhhcC-CCEEEEE-CCCCChhHHH---Hc----C-------------------Ccc---cCHH
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL-GMHVIAH-DPYAPADRAR---AI----G-------------------VDL---VSFD 246 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~-g~~V~~~-d~~~~~~~a~---~~----g-------------------~~~---~~l~ 246 (600)
.+|||+|+|+||+.+++.+... +++|.+. |+....+... +. | +.. .+++
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~~ 83 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPS 83 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCHH
Confidence 4899999999999999998754 6898775 5423332211 10 0 000 1445
Q ss_pred HH-h--ccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCC
Q 007512 247 EA-I--ATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARG 289 (600)
Q Consensus 247 el-l--~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg 289 (600)
++ + ..+|+|+.|+|... ++ +..-..++.|+..|+++-.
T Consensus 84 ~l~~~~~~vDvV~eatg~~~-~~----e~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 84 KIKWGDAGAEYVVESTGVFT-TM----EKAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp GCCTTTTTCCEEEECSSSCC-SH----HHHGGGGGGTCSEEEESSC
T ss_pred HCccccCCCCEEEECCCchh-hH----HHHHHHHhCCCeEEEeccC
Confidence 55 2 57899999999543 22 2222346778777777654
No 360
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=95.03 E-value=0.014 Score=59.87 Aligned_cols=51 Identities=16% Similarity=0.091 Sum_probs=44.0
Q ss_pred cEEEEEecCCCCChhhHHhhhhcCCccccceEeeeecCCCcEEEEEEeCCC
Q 007512 527 SIILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVAPRKHAVMAIGVDEQ 577 (600)
Q Consensus 527 ~~Liv~~~D~pG~Ia~V~~iL~~~~INIa~m~v~R~~~g~~al~~i~~D~~ 577 (600)
+.|.+..+|+||+|+.|++.|+++|+||..++..-....+.-+|+++++-+
T Consensus 23 ~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~ 73 (302)
T 3o1l_A 23 FRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRAD 73 (302)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGG
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecC
Confidence 466777899999999999999999999999998865567788899988753
No 361
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.99 E-value=0.022 Score=61.77 Aligned_cols=68 Identities=13% Similarity=0.021 Sum_probs=48.6
Q ss_pred ceeccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhHHH---HcCCccc--C-HHHHhccCCEEEEec
Q 007512 192 GVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRAR---AIGVDLV--S-FDEAIATADFISLHM 259 (600)
Q Consensus 192 g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~---~~g~~~~--~-l~ell~~aDvV~l~~ 259 (600)
...+.|+++.|||.|.+|.+.++.|...|.+|.++||....+... +.++.+. . -++.+..+|+|+.+.
T Consensus 7 ~~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~at 80 (457)
T 1pjq_A 7 FCQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAAT 80 (457)
T ss_dssp EECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECC
T ss_pred EEECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEEcC
Confidence 357899999999999999999999999999999999976543221 1233321 1 123456677776643
No 362
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=94.92 E-value=0.037 Score=56.98 Aligned_cols=63 Identities=21% Similarity=0.282 Sum_probs=47.0
Q ss_pred CEEEEEecChhHHHHHHHhhc-C-CCEEE-EECCCCC---hhHHHHcCCcc--cCHHHHh-----ccCCEEEEecC
Q 007512 198 KTLAVLGFGKVGSEVARRAKG-L-GMHVI-AHDPYAP---ADRARAIGVDL--VSFDEAI-----ATADFISLHMP 260 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~-~-g~~V~-~~d~~~~---~~~a~~~g~~~--~~l~ell-----~~aDvV~l~~P 260 (600)
.+|||||+|.||+.+++.+.. + ++++. ++|++.. ...+.+.|+.. .+.++++ .+.|+|+.|+|
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp 80 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATS 80 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSC
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCC
Confidence 489999999999999999954 4 67765 4687753 24456777752 3567775 45899999999
No 363
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=94.88 E-value=0.018 Score=55.13 Aligned_cols=51 Identities=14% Similarity=0.137 Sum_probs=40.7
Q ss_pred ccEEEEEecCCCCChhhHHhhhhcCCccccceEeeeec----CCCcEEEEEEeCC
Q 007512 526 GSIILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVA----PRKHAVMAIGVDE 576 (600)
Q Consensus 526 ~~~Liv~~~D~pG~Ia~V~~iL~~~~INIa~m~v~R~~----~g~~al~~i~~D~ 576 (600)
.+.|-+..+|+||+++.|+++|+++|+||..++..-.. ..+.-.|.+.++-
T Consensus 93 ~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~ 147 (195)
T 2nyi_A 93 EYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAF 147 (195)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEE
T ss_pred EEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEc
Confidence 45677778999999999999999999999999887544 3344677777764
No 364
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.88 E-value=0.026 Score=59.13 Aligned_cols=87 Identities=25% Similarity=0.270 Sum_probs=60.3
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCC-ChhHHHHcCCccc------CHHHHhc--------cCCEEEEec
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYA-PADRARAIGVDLV------SFDEAIA--------TADFISLHM 259 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~-~~~~a~~~g~~~~------~l~ell~--------~aDvV~l~~ 259 (600)
.|++|.|+|.|.+|...++.++.+|. +|++.|+.. ..+.++++|+..+ ++.+.+. ..|+|+-++
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~ 261 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECA 261 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECC
Confidence 47899999999999999999999999 999998876 4456777787421 2333332 367777766
Q ss_pred CCCccccccccHhHhccCCCceEEEEcc
Q 007512 260 PLTPATSKVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 260 Pl~~~t~~li~~~~l~~mk~gailvNva 287 (600)
...+ + -...+..++++..++.++
T Consensus 262 G~~~-~----~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 262 GVAE-T----VKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp CCHH-H----HHHHHHHEEEEEEEEECS
T ss_pred CCHH-H----HHHHHHHhccCCEEEEEe
Confidence 5211 1 133455577777777765
No 365
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=94.87 E-value=0.033 Score=57.90 Aligned_cols=94 Identities=12% Similarity=0.156 Sum_probs=59.9
Q ss_pred eccCCEEEEEecChhHHHHHHHhhcCCC--EEEEECCCCChhHH--H--HcC-----C-c---ccCHHHHhccCCEEEEe
Q 007512 194 SLVGKTLAVLGFGKVGSEVARRAKGLGM--HVIAHDPYAPADRA--R--AIG-----V-D---LVSFDEAIATADFISLH 258 (600)
Q Consensus 194 ~l~gktiGIIGlG~IG~~vA~~l~~~g~--~V~~~d~~~~~~~a--~--~~g-----~-~---~~~l~ell~~aDvV~l~ 258 (600)
....++|+|||.|.||..+|..+...|. ++..||........ . +.. . . ..+.+ .+++||+|+++
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~-~~~~aDiVvi~ 94 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS-VTANSKLVIIT 94 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG-GGTTEEEEEEC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH-HhCCCCEEEEc
Confidence 4567899999999999999999876665 99999986422111 1 111 0 1 12444 58999999998
Q ss_pred cCCCc---cccc-ccc--H-------hHhccCCCceEEEEccC
Q 007512 259 MPLTP---ATSK-VLN--D-------ETFGKMKKGVRIINVAR 288 (600)
Q Consensus 259 ~Pl~~---~t~~-li~--~-------~~l~~mk~gailvNvar 288 (600)
.-... .|+. ++. . +.+....|++++++++-
T Consensus 95 aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN 137 (331)
T 4aj2_A 95 AGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN 137 (331)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 75322 1221 221 1 12333578999999963
No 366
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.87 E-value=0.043 Score=58.19 Aligned_cols=89 Identities=24% Similarity=0.291 Sum_probs=61.2
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCC-ChhHHHHcCCccc------CHHHHh------ccCCEEEEecCC
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYA-PADRARAIGVDLV------SFDEAI------ATADFISLHMPL 261 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~-~~~~a~~~g~~~~------~l~ell------~~aDvV~l~~Pl 261 (600)
.|.+|.|+|.|.+|...++.++.+|. +|++.|... ..+.++++|...+ ++.+.+ ...|+|+-++..
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~ 292 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGV 292 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCC
Confidence 58899999999999999999999999 999999776 4566778886421 222221 147888887763
Q ss_pred CccccccccHhHhccC----CCceEEEEccC
Q 007512 262 TPATSKVLNDETFGKM----KKGVRIINVAR 288 (600)
Q Consensus 262 ~~~t~~li~~~~l~~m----k~gailvNvar 288 (600)
...+. ...+..+ +++..++.++-
T Consensus 293 ~~~~~----~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 293 PQLVW----PQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp HHHHH----HHHHHHHHHCSCCCCEEEECSC
T ss_pred cHHHH----HHHHHHHHhccCCCcEEEEeCC
Confidence 31111 2223334 78888887763
No 367
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.86 E-value=0.044 Score=56.99 Aligned_cols=88 Identities=24% Similarity=0.291 Sum_probs=62.4
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCC-ChhHHHHcCCccc---C---HHH----Hh----ccCCEEEEec
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYA-PADRARAIGVDLV---S---FDE----AI----ATADFISLHM 259 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~-~~~~a~~~g~~~~---~---l~e----ll----~~aDvV~l~~ 259 (600)
.|.+|.|+|.|.+|...++.++.+|. +|++.|+.. ..+.++++|...+ + -++ +. ...|+|+-++
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 250 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 250 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECC
Confidence 47899999999999999999999999 999998765 3466777887421 1 111 11 2478888877
Q ss_pred CCCccccccccHhHhccCCCceEEEEccC
Q 007512 260 PLTPATSKVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 260 Pl~~~t~~li~~~~l~~mk~gailvNvar 288 (600)
.... + -...+..++++..++.++-
T Consensus 251 g~~~-~----~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 251 GAEA-S----IQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp CCHH-H----HHHHHHHSCTTCEEEECSC
T ss_pred CChH-H----HHHHHHHhcCCCEEEEEec
Confidence 6321 1 1345666888888888764
No 368
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.84 E-value=0.0077 Score=61.04 Aligned_cols=40 Identities=20% Similarity=0.225 Sum_probs=36.7
Q ss_pred ceeccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC
Q 007512 192 GVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP 231 (600)
Q Consensus 192 g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~ 231 (600)
...+.|++|.|||.|.+|.+.++.|...|++|.++||...
T Consensus 8 ~~~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 8 AHQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDLH 47 (274)
T ss_dssp EECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEEC
T ss_pred EEEcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 4578999999999999999999999999999999998653
No 369
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.80 E-value=0.057 Score=55.57 Aligned_cols=95 Identities=14% Similarity=0.159 Sum_probs=61.2
Q ss_pred CEEEEEec-ChhHHHHHHHhhcCC--CEEEEECCCCChhHHHHcC-------Ccc----cCHHHHhccCCEEEEecCCCc
Q 007512 198 KTLAVLGF-GKVGSEVARRAKGLG--MHVIAHDPYAPADRARAIG-------VDL----VSFDEAIATADFISLHMPLTP 263 (600)
Q Consensus 198 ktiGIIGl-G~IG~~vA~~l~~~g--~~V~~~d~~~~~~~a~~~g-------~~~----~~l~ell~~aDvV~l~~Pl~~ 263 (600)
++|+|||. |.+|..++..|...| .+|..+|.......+.++. +.. .++++.++.||+|+++.+...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~ 80 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR 80 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcCC
Confidence 37999998 999999999998666 6899999875222222221 111 257788999999999986432
Q ss_pred cccccc-------cHh-------HhccCCCceEEEEccCCccccHH
Q 007512 264 ATSKVL-------NDE-------TFGKMKKGVRIINVARGGVIDEE 295 (600)
Q Consensus 264 ~t~~li-------~~~-------~l~~mk~gailvNvarg~ivde~ 295 (600)
..+.- |.. .+....|+++++++ ...+|.-
T Consensus 81 -~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~--sNPv~~~ 123 (314)
T 1mld_A 81 -KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII--SNPVNST 123 (314)
T ss_dssp -CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC--SSCHHHH
T ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE--CCCcchh
Confidence 11110 111 12223578899997 4455643
No 370
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=94.80 E-value=0.069 Score=55.63 Aligned_cols=62 Identities=18% Similarity=0.300 Sum_probs=44.7
Q ss_pred hHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccc-eeccCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCC
Q 007512 155 TVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVG-VSLVGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPY 229 (600)
Q Consensus 155 ~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g-~~l~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~ 229 (600)
..-.||.++-|=|-+.| |.-....| ..|++++|.|||+|-+|..+|+.|...|. ++..+|..
T Consensus 4 p~~~~~~~~~lnl~lm~-------------wRll~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 4 PLKIADQSVDLNLKLMK-------------WRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HHHHHHHHHHHHHHHHH-------------HHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHH-------------HhhcchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 44567776666555444 43211122 46899999999999999999999998886 78888764
No 371
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.79 E-value=0.028 Score=56.96 Aligned_cols=85 Identities=19% Similarity=0.315 Sum_probs=58.5
Q ss_pred cCCEEEEEec-ChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc-C------HHHHhccCCEEEEecCCCcccc
Q 007512 196 VGKTLAVLGF-GKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV-S------FDEAIATADFISLHMPLTPATS 266 (600)
Q Consensus 196 ~gktiGIIGl-G~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~-~------l~ell~~aDvV~l~~Pl~~~t~ 266 (600)
.|+++.|+|. |.+|...++.++..|++|++.+++. ..+.+++.|...+ + +.+.+..+|+|+- +.. +
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~-~--- 199 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG-K--- 199 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC-T---
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH-H---
Confidence 4789999998 9999999999999999999998865 3455667776421 2 1122345777776 653 1
Q ss_pred ccccHhHhccCCCceEEEEcc
Q 007512 267 KVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 267 ~li~~~~l~~mk~gailvNva 287 (600)
.-...+..|+++..++.++
T Consensus 200 --~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 200 --EVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp --THHHHHTTEEEEEEEEEC-
T ss_pred --HHHHHHHhhccCCEEEEEe
Confidence 1244566677777777665
No 372
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=94.77 E-value=0.024 Score=57.74 Aligned_cols=101 Identities=20% Similarity=0.327 Sum_probs=64.9
Q ss_pred CCEEEEEec-ChhHHHHHHHhhcCCCEEE-EECCCCChhHHHHcCCccc-CHHHHhc--cCCEEEEecCCCccccccccH
Q 007512 197 GKTLAVLGF-GKVGSEVARRAKGLGMHVI-AHDPYAPADRARAIGVDLV-SFDEAIA--TADFISLHMPLTPATSKVLND 271 (600)
Q Consensus 197 gktiGIIGl-G~IG~~vA~~l~~~g~~V~-~~d~~~~~~~a~~~g~~~~-~l~ell~--~aDvV~l~~Pl~~~t~~li~~ 271 (600)
.++|.|+|. |++|+.+++.++..|++++ ..+|..... ...|+... +++++.. .+|++++++| .+.+...+.+
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~--~i~G~~vy~sl~el~~~~~~Dv~Ii~vp-~~~~~~~~~e 83 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGM--EVLGVPVYDTVKEAVAHHEVDASIIFVP-APAAADAALE 83 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC--EETTEEEESSHHHHHHHSCCSEEEECCC-HHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCc--eECCEEeeCCHHHHhhcCCCCEEEEecC-HHHHHHHHHH
Confidence 468999999 9999999999998899854 677764211 12466544 7999988 8999999999 3333433332
Q ss_pred hHhccCCCceE-EEEccCCcc-ccHHHHHHhHhcC
Q 007512 272 ETFGKMKKGVR-IINVARGGV-IDEEALVRALDSG 304 (600)
Q Consensus 272 ~~l~~mk~gai-lvNvarg~i-vde~aL~~aL~~g 304 (600)
- . +.|.- +|..+.|=- .+++.+.++.++.
T Consensus 84 a-~---~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~ 114 (288)
T 1oi7_A 84 A-A---HAGIPLIVLITEGIPTLDMVRAVEEIKAL 114 (288)
T ss_dssp H-H---HTTCSEEEECCSCCCHHHHHHHHHHHHHH
T ss_pred H-H---HCCCCEEEEECCCCCHHHHHHHHHHHHHc
Confidence 2 2 22322 444444421 2345666666554
No 373
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=94.68 E-value=0.041 Score=57.31 Aligned_cols=31 Identities=35% Similarity=0.607 Sum_probs=26.3
Q ss_pred CEEEEEecChhHHHHHHHhhcC-CCEEEEE-CC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL-GMHVIAH-DP 228 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~-g~~V~~~-d~ 228 (600)
.+|||+|+|+||+.+++.+... +++|.+. |+
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~ 36 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVNDP 36 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECS
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEECC
Confidence 3899999999999999999866 7888775 54
No 374
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=94.65 E-value=0.036 Score=56.52 Aligned_cols=52 Identities=15% Similarity=0.176 Sum_probs=45.1
Q ss_pred ccEEEEEecCCCCChhhHHhhhhcCCccccceEeeeecCCCcEEEEEEeCCC
Q 007512 526 GSIILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVAPRKHAVMAIGVDEQ 577 (600)
Q Consensus 526 ~~~Liv~~~D~pG~Ia~V~~iL~~~~INIa~m~v~R~~~g~~al~~i~~D~~ 577 (600)
.+.|.+..+|+||+|+.|++.|+++|+||..++.......+.-+|+++++.+
T Consensus 7 ~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~ 58 (287)
T 3nrb_A 7 QYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIP 58 (287)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECC
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcC
Confidence 3567788999999999999999999999999998766677888899988764
No 375
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.64 E-value=0.03 Score=58.10 Aligned_cols=87 Identities=25% Similarity=0.266 Sum_probs=57.5
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCC-ChhHHHHcCCccc------CHHHHh----c--cCCEEEEecCC
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYA-PADRARAIGVDLV------SFDEAI----A--TADFISLHMPL 261 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~-~~~~a~~~g~~~~------~l~ell----~--~aDvV~l~~Pl 261 (600)
.|.+|.|+|.|.||...++.++..|. +|++.|+.. ..+.++++|...+ ++.+.+ . ..|+|+-++..
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g~ 245 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGGD 245 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 47899999999999999999999998 899999876 3566777776421 122111 1 36666666552
Q ss_pred CccccccccHhHhccCCCceEEEEcc
Q 007512 262 TPATSKVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 262 ~~~t~~li~~~~l~~mk~gailvNva 287 (600)
.+ .-...+..++++..++.++
T Consensus 246 ~~-----~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 246 VH-----TFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp TT-----HHHHHHHHEEEEEEEEECC
T ss_pred hH-----HHHHHHHHHhcCCEEEEec
Confidence 21 1133445566666666654
No 376
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.63 E-value=0.046 Score=57.32 Aligned_cols=87 Identities=26% Similarity=0.349 Sum_probs=59.1
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCC-ChhHHHHcCCcc-cC-------HHHHhc-----cCCEEEEecC
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYA-PADRARAIGVDL-VS-------FDEAIA-----TADFISLHMP 260 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~-~~~~a~~~g~~~-~~-------l~ell~-----~aDvV~l~~P 260 (600)
.|.+|.|+|.|.||...++.++..|. +|++.|+.. ..+.++++|+.. ++ +.+.+. ..|+|+-++.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g 272 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIG 272 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCC
Confidence 48899999999999999999999998 899999776 456677778642 11 222221 3677777665
Q ss_pred CCccccccccHhHhccCCCc-eEEEEcc
Q 007512 261 LTPATSKVLNDETFGKMKKG-VRIINVA 287 (600)
Q Consensus 261 l~~~t~~li~~~~l~~mk~g-ailvNva 287 (600)
..+ + -...+..++++ ..++.++
T Consensus 273 ~~~-~----~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 273 NVS-V----MRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp CHH-H----HHHHHHTBCTTTCEEEECS
T ss_pred CHH-H----HHHHHHHhhccCCEEEEEc
Confidence 211 1 13345556664 6666665
No 377
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.62 E-value=0.038 Score=57.70 Aligned_cols=46 Identities=35% Similarity=0.387 Sum_probs=38.7
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCc
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVD 241 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~ 241 (600)
.|++|.|+|.|.||...++.++.+|.+|++.++.. ..+.++++|+.
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~ 235 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGAD 235 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCC
Confidence 48899999999999999999999999999998765 34556666653
No 378
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.62 E-value=0.048 Score=56.54 Aligned_cols=88 Identities=18% Similarity=0.192 Sum_probs=60.1
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc-------C-HHHH---h-----ccCCEEEEe
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV-------S-FDEA---I-----ATADFISLH 258 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~-------~-l~el---l-----~~aDvV~l~ 258 (600)
.|++|.|+|.|.+|...++.++.+|.+|++.|+.. ..+.++++|...+ + .+++ . ...|+|+-+
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~ 247 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC 247 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEEC
Confidence 47899999999999999999999999999998765 3455677776321 1 1122 2 247888777
Q ss_pred cCCCccccccccHhHhccCCCceEEEEccC
Q 007512 259 MPLTPATSKVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 259 ~Pl~~~t~~li~~~~l~~mk~gailvNvar 288 (600)
+.... + -...+..++++..++.++.
T Consensus 248 ~g~~~-~----~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 248 SGNEK-C----ITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp SCCHH-H----HHHHHHHSCTTCEEEECSC
T ss_pred CCCHH-H----HHHHHHHHhcCCEEEEEec
Confidence 65221 1 1334566777777777763
No 379
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=94.61 E-value=0.06 Score=56.44 Aligned_cols=86 Identities=26% Similarity=0.365 Sum_probs=54.6
Q ss_pred CEEEEEecChhHHHHHHHhhcC-CCEEEEE-CCCCChhH-HH--Hc----C-------------------Cccc---CHH
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL-GMHVIAH-DPYAPADR-AR--AI----G-------------------VDLV---SFD 246 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~-g~~V~~~-d~~~~~~~-a~--~~----g-------------------~~~~---~l~ 246 (600)
.+|||+|+|+||+.+.|.|... +++|.+. ||....+. +. +. | +... +.+
T Consensus 18 ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 97 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKDPA 97 (354)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSCGG
T ss_pred eEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCChH
Confidence 3899999999999999999876 7888876 44544321 11 00 0 0011 334
Q ss_pred HH-h--ccCCEEEEecCCCccccccccHhHhccCCCce--EEEEccC
Q 007512 247 EA-I--ATADFISLHMPLTPATSKVLNDETFGKMKKGV--RIINVAR 288 (600)
Q Consensus 247 el-l--~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~ga--ilvNvar 288 (600)
++ + ..+|+|+.|+|... ++ +..-..++.|+ ++|+.+.
T Consensus 98 ~i~w~~~~vDvV~eatg~~~-s~----e~a~~~l~~GakkvVId~pa 139 (354)
T 3cps_A 98 EIPWGASGAQIVCESTGVFT-TE----EKASLHLKGGAKKVIISAPP 139 (354)
T ss_dssp GCCHHHHTCCEEEECSSSCC-SH----HHHGGGGTTTCSEEEESSCC
T ss_pred HCCcccCCCCEEEECCCchh-hH----HHHHHHHHcCCcEEEEeCCC
Confidence 43 2 57999999999543 22 12223367788 9999864
No 380
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=94.60 E-value=0.038 Score=60.26 Aligned_cols=113 Identities=16% Similarity=0.177 Sum_probs=69.1
Q ss_pred CCEEEEEecChhH--HHHHHHhh---cC-CCEEEEECCCCCh-hH----HH----HcCC----cc-cCHHHHhccCCEEE
Q 007512 197 GKTLAVLGFGKVG--SEVARRAK---GL-GMHVIAHDPYAPA-DR----AR----AIGV----DL-VSFDEAIATADFIS 256 (600)
Q Consensus 197 gktiGIIGlG~IG--~~vA~~l~---~~-g~~V~~~d~~~~~-~~----a~----~~g~----~~-~~l~ell~~aDvV~ 256 (600)
.++|+|||.|.+| .++|..+. ++ |.+|..||..... +. .. ..+. .. .++++.++.||+|+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~VI 82 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 82 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEEE
Confidence 4689999999975 55565553 34 8899999987521 11 11 1111 12 37888999999999
Q ss_pred EecCCCc-----------ccccccc-------------------------H---hHhccCCCceEEEEccCCccccHHHH
Q 007512 257 LHMPLTP-----------ATSKVLN-------------------------D---ETFGKMKKGVRIINVARGGVIDEEAL 297 (600)
Q Consensus 257 l~~Pl~~-----------~t~~li~-------------------------~---~~l~~mk~gailvNvarg~ivde~aL 297 (600)
+++|... .-.+++. . +.+....|+++++|++---=+-..++
T Consensus 83 iaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~t~~~ 162 (480)
T 1obb_A 83 NTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLV 162 (480)
T ss_dssp ECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHHHH
T ss_pred ECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH
Confidence 9997410 0011110 0 22334568999999975433335555
Q ss_pred HHhHhcCCceEEE
Q 007512 298 VRALDSGRVAQAA 310 (600)
Q Consensus 298 ~~aL~~g~i~ga~ 310 (600)
.+ +...++.|.+
T Consensus 163 ~k-~p~~rviG~c 174 (480)
T 1obb_A 163 TR-TVPIKAVGFC 174 (480)
T ss_dssp HH-HSCSEEEEEC
T ss_pred HH-CCCCcEEecC
Confidence 44 6667787753
No 381
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=94.60 E-value=0.35 Score=51.70 Aligned_cols=107 Identities=21% Similarity=0.349 Sum_probs=71.2
Q ss_pred ceeccCCEEEEEecChhHHHHHHHhhcCCCEEEE-EC-------CCC-ChhHHHHc----C------CcccCHHHHh-cc
Q 007512 192 GVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIA-HD-------PYA-PADRARAI----G------VDLVSFDEAI-AT 251 (600)
Q Consensus 192 g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~-~d-------~~~-~~~~a~~~----g------~~~~~l~ell-~~ 251 (600)
|.++.|+|+.|-|+|++|+..|+.|...|.+|++ .| |.- +.+...+. | .+.++-++++ ..
T Consensus 216 g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~~~~~~~i~~~~ 295 (424)
T 3k92_A 216 GIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTDVITNEELLEKD 295 (424)
T ss_dssp TCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSCCBCHHHHHHSC
T ss_pred CCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcEEecCccceecc
Confidence 5679999999999999999999999999999864 34 332 33322221 2 2334555654 56
Q ss_pred CCEEEEecCCCccccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 252 ADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 252 aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
||+++-|.. .+.|+.+....++ -.+|+-.+-+++ ..++ .+.|.+..|
T Consensus 296 ~DIliPcA~-----~n~I~~~~a~~l~-ak~V~EgAN~p~-t~eA-~~iL~~rGI 342 (424)
T 3k92_A 296 CDILVPAAI-----SNQITAKNAHNIQ-ASIVVERANGPT-TIDA-TKILNERGV 342 (424)
T ss_dssp CSEEEECSC-----SSCBCTTTGGGCC-CSEEECCSSSCB-CHHH-HHHHHHTTC
T ss_pred ccEEeecCc-----ccccChhhHhhcC-ceEEEcCCCCCC-CHHH-HHHHHHCCC
Confidence 999988875 3457777777774 346666677776 4433 344555444
No 382
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.56 E-value=0.022 Score=53.77 Aligned_cols=35 Identities=20% Similarity=0.264 Sum_probs=31.7
Q ss_pred cCCEEEEEe-cChhHHHHHHHhhcCCCEEEEECCCC
Q 007512 196 VGKTLAVLG-FGKVGSEVARRAKGLGMHVIAHDPYA 230 (600)
Q Consensus 196 ~gktiGIIG-lG~IG~~vA~~l~~~g~~V~~~d~~~ 230 (600)
.|+++.|+| .|.||..+++.++..|++|++.++..
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~ 73 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD 73 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCH
Confidence 478999999 69999999999999999999998764
No 383
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.55 E-value=0.04 Score=57.00 Aligned_cols=88 Identities=19% Similarity=0.175 Sum_probs=60.4
Q ss_pred cCCEEEEEec-ChhHHHHHHHhhcCCCEEEEECCCCC-hhHHHHcCCcc-------cCHHHHhc-----cCCEEEEecCC
Q 007512 196 VGKTLAVLGF-GKVGSEVARRAKGLGMHVIAHDPYAP-ADRARAIGVDL-------VSFDEAIA-----TADFISLHMPL 261 (600)
Q Consensus 196 ~gktiGIIGl-G~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a~~~g~~~-------~~l~ell~-----~aDvV~l~~Pl 261 (600)
.|+++.|+|. |.||..+++.++..|.+|++.+++.. .+.+++.|... .++.+.+. ..|+|+.++..
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVS 248 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCc
Confidence 4789999999 89999999999999999999987653 34556666531 12333332 36777777652
Q ss_pred CccccccccHhHhccCCCceEEEEccC
Q 007512 262 TPATSKVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 262 ~~~t~~li~~~~l~~mk~gailvNvar 288 (600)
.+ .-...+..|+++..+++++.
T Consensus 249 ~~-----~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 249 EA-----AIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp HH-----HHHHHTTSEEEEEEEEECCC
T ss_pred HH-----HHHHHHHHHhcCCEEEEEeC
Confidence 11 12345566777777777764
No 384
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=94.54 E-value=0.11 Score=55.54 Aligned_cols=97 Identities=24% Similarity=0.256 Sum_probs=65.0
Q ss_pred CceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEe-----cCh---hHHHHHHH
Q 007512 144 GCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLG-----FGK---VGSEVARR 215 (600)
Q Consensus 144 GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIG-----lG~---IG~~vA~~ 215 (600)
.++|+|+-+...-++ .+++=++.+.+++ |.+ ..+.|++|+|+| +|. +..+++..
T Consensus 153 ~~PVINa~~~~~HPt--QaLaDl~TI~E~~---------G~l-------~~l~Glkva~vgd~~~s~Gd~nnVa~Sli~~ 214 (418)
T 2yfk_A 153 RPTLVNLQCDIDHPT--QAMADALHLIHEF---------GGI-------ENLKGKKVAMTWAYSPSYGKPLSVPQGIVGL 214 (418)
T ss_dssp CCEEEEEEESSCCHH--HHHHHHHHHHHHT---------TSS-------GGGTTCEEEEECCCCSSSCCCSHHHHHHHHH
T ss_pred CCeEEeCCCCccChH--HHHHHHHHHHHHh---------CCc-------cccCCCEEEEEeccccccCccchHHHHHHHH
Confidence 456889765544443 3444444444421 111 038899999998 454 99999999
Q ss_pred hhcCCCEEEEECCCC---ChhH-------HHHcCC--c-ccCHHHHhccCCEEEEe
Q 007512 216 AKGLGMHVIAHDPYA---PADR-------ARAIGV--D-LVSFDEAIATADFISLH 258 (600)
Q Consensus 216 l~~~g~~V~~~d~~~---~~~~-------a~~~g~--~-~~~l~ell~~aDvV~l~ 258 (600)
+..+|++|....|.. .++. +.+.|. . ..++++++++||+|..-
T Consensus 215 l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~d~~eav~~ADVVytd 270 (418)
T 2yfk_A 215 MTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTNSMAEAFKDADVVYPK 270 (418)
T ss_dssp HGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEESCHHHHHTTCSEEEEC
T ss_pred HHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEEc
Confidence 999999999998863 2221 224564 3 34899999999999984
No 385
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=94.54 E-value=0.031 Score=53.15 Aligned_cols=49 Identities=14% Similarity=0.188 Sum_probs=39.9
Q ss_pred cEEEEEecCCCCChhhHHhhhhcCCccccceEeeeecCCCcEEEEEEeCCC
Q 007512 527 SIILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVAPRKHAVMAIGVDEQ 577 (600)
Q Consensus 527 ~~Liv~~~D~pG~Ia~V~~iL~~~~INIa~m~v~R~~~g~~al~~i~~D~~ 577 (600)
+.+.+..+|+||+++.|+++|+++|+||...+... ..+.-.|++.++.+
T Consensus 7 ~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~--~~~~f~~~~~v~~~ 55 (192)
T 1u8s_A 7 LVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAM--FGKEFTLLMLISGS 55 (192)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE--ETTEEEEEEEEEEC
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeee--cCCceEEEEEEecC
Confidence 56777889999999999999999999999999876 34555667766543
No 386
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=94.49 E-value=0.066 Score=56.06 Aligned_cols=95 Identities=16% Similarity=0.186 Sum_probs=60.9
Q ss_pred CCEEEEEe-cChhHHHHHHHhhcC-CCEEEEECCCCCh--hHH-------HHcCCcccCHHHHhccCCEEEEecCCCccc
Q 007512 197 GKTLAVLG-FGKVGSEVARRAKGL-GMHVIAHDPYAPA--DRA-------RAIGVDLVSFDEAIATADFISLHMPLTPAT 265 (600)
Q Consensus 197 gktiGIIG-lG~IG~~vA~~l~~~-g~~V~~~d~~~~~--~~a-------~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t 265 (600)
-.+||||| .|.+|+++.++|..+ ..++.......+. ... .+.-+...+.++++.++|++++|+|...
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~~~~~~~~~~Dvvf~alp~~~-- 90 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPAGA-- 90 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCSTTH--
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEeCCHHHhhcCCCEEEECCCcHH--
Confidence 35899996 799999999999876 4677665432211 111 1111222355666688999999999543
Q ss_pred cccccHhHhccCCCceEEEEccCCccccHHHHH
Q 007512 266 SKVLNDETFGKMKKGVRIINVARGGVIDEEALV 298 (600)
Q Consensus 266 ~~li~~~~l~~mk~gailvNvarg~ivde~aL~ 298 (600)
..+....+ .|+.+||.+..-=++..+.+
T Consensus 91 ----s~~~~~~~-~g~~VIDlSsdfRl~~~~~y 118 (351)
T 1vkn_A 91 ----SYDLVREL-KGVKIIDLGADFRFDDPGVY 118 (351)
T ss_dssp ----HHHHHTTC-CSCEEEESSSTTTCSSHHHH
T ss_pred ----HHHHHHHh-CCCEEEECChhhhCCchhhh
Confidence 45555556 79999999854333433333
No 387
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=94.42 E-value=0.052 Score=55.77 Aligned_cols=63 Identities=17% Similarity=0.240 Sum_probs=45.1
Q ss_pred EEEEEecChhHHHHHHHhhcCCC-EEEEECCCCChhHH--HH-------c--CC--cc-cCHHHHhccCCEEEEecCCC
Q 007512 199 TLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYAPADRA--RA-------I--GV--DL-VSFDEAIATADFISLHMPLT 262 (600)
Q Consensus 199 tiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~~~~~a--~~-------~--g~--~~-~~l~ell~~aDvV~l~~Pl~ 262 (600)
+|+|||.|.+|..+|..+...|+ +|..+|........ .+ . .. .. .+. +.+++||+|+++.+..
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~ 78 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIG 78 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCC
Confidence 58999999999999999875566 79999987532211 11 1 21 22 355 6799999999998743
No 388
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=94.39 E-value=0.02 Score=55.77 Aligned_cols=66 Identities=14% Similarity=0.235 Sum_probs=45.3
Q ss_pred CCEEEEEecChhHHHHHHHh--hcCCCEEEE-ECCCCC-hhHH-HHcCCcc---cCHHHHhcc--CCEEEEecCCC
Q 007512 197 GKTLAVLGFGKVGSEVARRA--KGLGMHVIA-HDPYAP-ADRA-RAIGVDL---VSFDEAIAT--ADFISLHMPLT 262 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l--~~~g~~V~~-~d~~~~-~~~a-~~~g~~~---~~l~ell~~--aDvV~l~~Pl~ 262 (600)
.++++|+|.|.+|+.+++.+ ...|+++.+ +|.++. ..-. .-.|+.. .++++++++ .|.+++|+|..
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL~~~v~~~~Id~vIIAvPs~ 159 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPST 159 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEEGGGHHHHC-CCSCCEEEECSCGG
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeCHHHHHHHHHHcCCCEEEEecCch
Confidence 35899999999999999984 356899887 465543 2111 1235543 367777764 99999999943
No 389
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.37 E-value=0.028 Score=58.73 Aligned_cols=87 Identities=21% Similarity=0.147 Sum_probs=55.9
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCC-ChhHHHHcCCccc------CHHHHhc-----cCCEEEEecCCC
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYA-PADRARAIGVDLV------SFDEAIA-----TADFISLHMPLT 262 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~-~~~~a~~~g~~~~------~l~ell~-----~aDvV~l~~Pl~ 262 (600)
.|++|.|+|.|.||...++.++.+|. +|++.|+.. ..+.++++|...+ ++.+.+. ..|+|+-++...
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~ 269 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSP 269 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECCCCH
Confidence 47899999999999999999999998 799998765 3455666675321 2222111 256666665421
Q ss_pred ccccccccHhHhccCCCceEEEEcc
Q 007512 263 PATSKVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 263 ~~t~~li~~~~l~~mk~gailvNva 287 (600)
+ + -...+..++++..++.++
T Consensus 270 ~-~----~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 270 E-I----LKQGVDALGILGKIAVVG 289 (371)
T ss_dssp H-H----HHHHHHTEEEEEEEEECC
T ss_pred H-H----HHHHHHHHhcCCEEEEeC
Confidence 1 1 133445566666666655
No 390
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=94.37 E-value=0.049 Score=58.26 Aligned_cols=64 Identities=20% Similarity=0.278 Sum_probs=47.2
Q ss_pred eccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcC----Cccc---CHHHHhccCCEEEE
Q 007512 194 SLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIG----VDLV---SFDEAIATADFISL 257 (600)
Q Consensus 194 ~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g----~~~~---~l~ell~~aDvV~l 257 (600)
-+.|++|+|+|-|.+|+.+++.++.+|++|+++|++.......-.. ..+. .+.+++.++|+|+.
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D~V~~ 102 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCEAVST 102 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence 5679999999999999999999999999999999876322111111 1122 25566788999983
No 391
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=94.36 E-value=0.053 Score=55.72 Aligned_cols=93 Identities=18% Similarity=0.144 Sum_probs=58.9
Q ss_pred CEEEEEecChhHHHHHHHhhcCC--CEEEEECCCCChhH--HHHc--------CCcc-cCHHHHhccCCEEEEecCCCcc
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLG--MHVIAHDPYAPADR--ARAI--------GVDL-VSFDEAIATADFISLHMPLTPA 264 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g--~~V~~~d~~~~~~~--a~~~--------g~~~-~~l~ell~~aDvV~l~~Pl~~~ 264 (600)
++|+|||.|.+|.+++..+...+ -++..||....... +.++ .+.. .+-.+.++.||+|+++.+...
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~~- 79 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVAQ- 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCCC-
Confidence 48999999999999999998555 58999998642111 1111 1111 123567999999999987443
Q ss_pred ccccc-------cHh-------HhccCCCceEEEEccCCcccc
Q 007512 265 TSKVL-------NDE-------TFGKMKKGVRIINVARGGVID 293 (600)
Q Consensus 265 t~~li-------~~~-------~l~~mk~gailvNvarg~ivd 293 (600)
..++- |.. .+.+..|+++++++ +..+|
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~--tNPv~ 120 (310)
T 2xxj_A 80 RPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVA--TNPVD 120 (310)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC--SSSHH
T ss_pred CCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEe--cCchH
Confidence 22220 111 12223688999997 44445
No 392
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=94.34 E-value=0.088 Score=54.96 Aligned_cols=84 Identities=19% Similarity=0.212 Sum_probs=50.2
Q ss_pred CEEEEEecChhHHHHHHHhhcC-CCEEEEE-CCCCCh--hHHHH--------------------cCCcc-cCHHHHhccC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL-GMHVIAH-DPYAPA--DRARA--------------------IGVDL-VSFDEAIATA 252 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~-g~~V~~~-d~~~~~--~~a~~--------------------~g~~~-~~l~ell~~a 252 (600)
.+|||+|+|+||+.+++.+... +++|.+. |..... ..++. .++.. .+.++++..+
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~~v 82 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIEDA 82 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGGGC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhccCC
Confidence 3799999999999999998765 6887765 322111 00111 11111 1345566789
Q ss_pred CEEEEecCCCccccccccHhHh--ccCCCceEEEEcc
Q 007512 253 DFISLHMPLTPATSKVLNDETF--GKMKKGVRIINVA 287 (600)
Q Consensus 253 DvV~l~~Pl~~~t~~li~~~~l--~~mk~gailvNva 287 (600)
|+|+.|+|... ..+.. ..++.|+.+|..+
T Consensus 83 DiV~eatg~~~------s~~~a~~~~l~aG~~VI~sa 113 (343)
T 2yyy_A 83 DIVVDGAPKKI------GKQNLENIYKPHKVKAILQG 113 (343)
T ss_dssp SEEEECCCTTH------HHHHHHHTTTTTTCEEEECT
T ss_pred CEEEECCCccc------cHHHHHHHHHHCCCEEEECC
Confidence 99999988432 11111 3466677666543
No 393
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=94.32 E-value=0.12 Score=54.75 Aligned_cols=87 Identities=20% Similarity=0.189 Sum_probs=65.4
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhcc
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGK 276 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~ 276 (600)
--++-|+|.|.+|+.+++.++.+|++|.++|++... + + .+-++.+|-++...| .+.+..
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~--~--------~-~~~fp~a~~~~~~~p----------~~~~~~ 262 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVF--A--------T-TARFPTADEVVVDWP----------HRYLAA 262 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTT--S--------C-TTTCSSSSEEEESCH----------HHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhh--c--------c-cccCCCceEEEeCCh----------HHHHHh
Confidence 458999999999999999999999999999988521 1 1 123466776655544 112222
Q ss_pred ------CCCceEEEEccCCccccHHHHHHhHhcC
Q 007512 277 ------MKKGVRIINVARGGVIDEEALVRALDSG 304 (600)
Q Consensus 277 ------mk~gailvNvarg~ivde~aL~~aL~~g 304 (600)
+.++..++=+.++.-.|...|..+|+.+
T Consensus 263 ~~~~~~~~~~t~vvvlTh~~~~D~~~L~~aL~~~ 296 (386)
T 2we8_A 263 QAEAGAIDARTVVCVLTHDPKFDVPLLEVALRLP 296 (386)
T ss_dssp HHHHTCCCTTCEEEECCCCHHHHHHHHHHHTTSS
T ss_pred hccccCCCCCcEEEEEECChHhHHHHHHHHhcCC
Confidence 6678888888898888999999999886
No 394
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=94.27 E-value=0.077 Score=50.48 Aligned_cols=64 Identities=20% Similarity=0.228 Sum_probs=45.9
Q ss_pred CEEEEEec-ChhHHHHHHHhhcCCCEEEEECCCCChhH-HHHcCCccc--CHH----HHhccCCEEEEecCC
Q 007512 198 KTLAVLGF-GKVGSEVARRAKGLGMHVIAHDPYAPADR-ARAIGVDLV--SFD----EAIATADFISLHMPL 261 (600)
Q Consensus 198 ktiGIIGl-G~IG~~vA~~l~~~g~~V~~~d~~~~~~~-a~~~g~~~~--~l~----ell~~aDvV~l~~Pl 261 (600)
++|.|.|. |.||+.+++.|...|.+|++.++...... ....++..+ ++. +.+..+|+|+.+...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCcc
Confidence 46899987 99999999999999999999988652211 111344321 322 578889999888765
No 395
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=94.26 E-value=0.048 Score=56.81 Aligned_cols=36 Identities=33% Similarity=0.673 Sum_probs=31.6
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEE-ECCCCChh
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIA-HDPYAPAD 233 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~-~d~~~~~~ 233 (600)
.+|||.|+|+||+.++|++..+|++|++ +||+.+.+
T Consensus 8 ~kvgInGFGRIGrlv~R~~~~~~veivainDp~~d~~ 44 (346)
T 3h9e_O 8 LTVGINGFGRIGRLVLRACMEKGVKVVAVNDPFIDPE 44 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECTTCCHH
T ss_pred eEEEEECCChHHHHHHHHHHhCCCEEEEEeCCCCChh
Confidence 4899999999999999999988999988 78876554
No 396
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=94.24 E-value=0.045 Score=56.48 Aligned_cols=62 Identities=6% Similarity=0.064 Sum_probs=45.6
Q ss_pred CEEEEEecChhHHHHHHHhhcCCCEEEE-ECCCC--ChhHHH----HcCC--c-ccCHHHHhcc--CCEEEEecC
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLGMHVIA-HDPYA--PADRAR----AIGV--D-LVSFDEAIAT--ADFISLHMP 260 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g~~V~~-~d~~~--~~~~a~----~~g~--~-~~~l~ell~~--aDvV~l~~P 260 (600)
.++||||+|.+|+..++.+ .-++++.+ +|++. ..+.+. +.|+ . +.++++++++ .|+|++|+|
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp 76 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTV 76 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSS
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 4899999999999877777 55788876 78764 222222 2354 2 4589999975 899999998
No 397
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.24 E-value=0.037 Score=57.20 Aligned_cols=87 Identities=16% Similarity=0.133 Sum_probs=56.8
Q ss_pred cCCEEEEEecChhHHHHHHHhhcC--CCEEEEECCCC-ChhHHHHcCCcc-cCHHH------Hhc---cCCEEEEecCCC
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGL--GMHVIAHDPYA-PADRARAIGVDL-VSFDE------AIA---TADFISLHMPLT 262 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~--g~~V~~~d~~~-~~~~a~~~g~~~-~~l~e------ll~---~aDvV~l~~Pl~ 262 (600)
.|++|.|+|.|.||...++.++.+ |.+|++.+++. ..+.++++|... .+..+ .+. ..|+|+-++...
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~~ 249 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTE 249 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCCCh
Confidence 689999999999999999999988 99999999765 445566777642 22211 111 356666665521
Q ss_pred ccccccccHhHhccCCCceEEEEcc
Q 007512 263 PATSKVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 263 ~~t~~li~~~~l~~mk~gailvNva 287 (600)
. + -...+..|+++..++.++
T Consensus 250 ~-~----~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 250 E-T----TYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp H-H----HHHHHHHEEEEEEEEECC
T ss_pred H-H----HHHHHHHhhcCCEEEEeC
Confidence 1 1 123344556666666554
No 398
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.19 E-value=0.029 Score=54.52 Aligned_cols=67 Identities=10% Similarity=0.116 Sum_probs=47.0
Q ss_pred ccCCEEEEEe-cChhHHHHHHHhhcCC-CEEEEECCCCChhH-HHHcCCc-----c---cCHHHHhccCCEEEEecCC
Q 007512 195 LVGKTLAVLG-FGKVGSEVARRAKGLG-MHVIAHDPYAPADR-ARAIGVD-----L---VSFDEAIATADFISLHMPL 261 (600)
Q Consensus 195 l~gktiGIIG-lG~IG~~vA~~l~~~g-~~V~~~d~~~~~~~-a~~~g~~-----~---~~l~ell~~aDvV~l~~Pl 261 (600)
...|++.|.| .|.||+.+++.|...| ++|+++++...... ....++. . .+++++++.+|+|+.+...
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~ 98 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTG 98 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCS
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Confidence 4467899999 7999999999999999 89999987652111 0111221 1 1356778889999877763
No 399
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=94.18 E-value=0.099 Score=56.03 Aligned_cols=95 Identities=20% Similarity=0.239 Sum_probs=57.2
Q ss_pred ceeccCCEEEEEecChhHHHHHHHhhcCCCEEEE-ECCC------------C-ChhH---HH-HcC-------CcccCHH
Q 007512 192 GVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIA-HDPY------------A-PADR---AR-AIG-------VDLVSFD 246 (600)
Q Consensus 192 g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~-~d~~------------~-~~~~---a~-~~g-------~~~~~l~ 246 (600)
|.++.|+++.|.|+|++|+.+|+.|...|.+|++ .|.+ - +.+. .+ +.| .+.++.+
T Consensus 207 g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i~~~ 286 (421)
T 2yfq_A 207 GIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERITDE 286 (421)
T ss_dssp TCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC-------------
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEeCcc
Confidence 5578999999999999999999999999999995 3444 1 1111 11 112 1222333
Q ss_pred HHh-ccCCEEEEecCCCccccccccHhHhccCCCceEEEEccCCccc
Q 007512 247 EAI-ATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVI 292 (600)
Q Consensus 247 ell-~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~iv 292 (600)
+++ ..||+++-|.+ .+.|+.+....++ ..+|+-.+.+++-
T Consensus 287 ~~~~~~~DIliP~A~-----~n~i~~~~A~~l~-ak~VvEgAN~P~t 327 (421)
T 2yfq_A 287 EFWTKEYDIIVPAAL-----ENVITGERAKTIN-AKLVCEAANGPTT 327 (421)
T ss_dssp --------CEEECSC-----SSCSCHHHHTTCC-CSEEECCSSSCSC
T ss_pred chhcCCccEEEEcCC-----cCcCCcccHHHcC-CeEEEeCCccccC
Confidence 443 36888888875 3447777777773 4566677777764
No 400
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.16 E-value=0.091 Score=56.70 Aligned_cols=85 Identities=24% Similarity=0.350 Sum_probs=61.6
Q ss_pred eeccCCEEEEEecC----------hhHHHHHHHhhcCCCEEEEECCCCChhHHHHcC--Cccc-CHHHHhccCCEEEEec
Q 007512 193 VSLVGKTLAVLGFG----------KVGSEVARRAKGLGMHVIAHDPYAPADRARAIG--VDLV-SFDEAIATADFISLHM 259 (600)
Q Consensus 193 ~~l~gktiGIIGlG----------~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g--~~~~-~l~ell~~aDvV~l~~ 259 (600)
..+.|++|+|+|+. .=...+++.|+..|.+|.+|||+...+.....+ +.++ ++++++++||.|++++
T Consensus 329 ~~l~g~~V~vlGlafK~~tdD~ReSpa~~ii~~L~~~Ga~V~~~DP~~~~~~~~~~~~~~~~~~~~~~a~~~aDavvi~t 408 (444)
T 3vtf_A 329 GGLRGRHVGVLGLAFKPNTDDVRESRGVEVARLLLERGARVYVHDPMAMEKARAVLGDSVTYVEDPQALLDQVEGVIIAT 408 (444)
T ss_dssp TCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHGGGSEECSCHHHHHHHCSEEEECS
T ss_pred cccCCCEEEEEeeecCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChHHHHhcCCCceecCCHHHHHhCCCEEEEcc
Confidence 46899999999986 126789999999999999999987433222333 4443 7899999999999998
Q ss_pred CCCccccccccHhHhccCCCceEEEEc
Q 007512 260 PLTPATSKVLNDETFGKMKKGVRIINV 286 (600)
Q Consensus 260 Pl~~~t~~li~~~~l~~mk~gailvNv 286 (600)
+-. +-+.+ + + ++.+|+|+
T Consensus 409 ~h~-ef~~l-d------~-~~~vv~D~ 426 (444)
T 3vtf_A 409 AWP-QYEGL-D------Y-RGKVVVDG 426 (444)
T ss_dssp CCG-GGGGS-C------C-TTCEEEES
T ss_pred CCH-HHhCC-C------c-CCCEEEEC
Confidence 733 22211 1 3 36788885
No 401
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=94.12 E-value=0.067 Score=57.75 Aligned_cols=64 Identities=19% Similarity=0.314 Sum_probs=46.8
Q ss_pred CEEEEEecChhHHHHHHHhhcC-CCEEEE-ECCCCCh-hH-HHHc-C----------------------Cc-ccCHHHHh
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL-GMHVIA-HDPYAPA-DR-ARAI-G----------------------VD-LVSFDEAI 249 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~-g~~V~~-~d~~~~~-~~-a~~~-g----------------------~~-~~~l~ell 249 (600)
.+|||||+|.||+.+++.+... ++++.+ +|++... .. +.+. | +. +.++++++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeLL 103 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLIL 103 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHHh
Confidence 4799999999999999988755 788765 6877632 22 2222 4 11 34799999
Q ss_pred c--cCCEEEEecCC
Q 007512 250 A--TADFISLHMPL 261 (600)
Q Consensus 250 ~--~aDvV~l~~Pl 261 (600)
+ +.|+|+.++|.
T Consensus 104 ~d~dIDaVviaTp~ 117 (446)
T 3upl_A 104 SNPLIDVIIDATGI 117 (446)
T ss_dssp TCTTCCEEEECSCC
T ss_pred cCCCCCEEEEcCCC
Confidence 7 58999999984
No 402
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=94.12 E-value=0.042 Score=56.47 Aligned_cols=107 Identities=18% Similarity=0.261 Sum_probs=69.9
Q ss_pred ceeccCCEEEEE-ec-ChhHHHHHHHhhcCCCEEE-EECCCCChhHHHHcCCccc-CHHHHhc--cCCEEEEecCCCccc
Q 007512 192 GVSLVGKTLAVL-GF-GKVGSEVARRAKGLGMHVI-AHDPYAPADRARAIGVDLV-SFDEAIA--TADFISLHMPLTPAT 265 (600)
Q Consensus 192 g~~l~gktiGII-Gl-G~IG~~vA~~l~~~g~~V~-~~d~~~~~~~a~~~g~~~~-~l~ell~--~aDvV~l~~Pl~~~t 265 (600)
..-+..+++.|| |. |+.|+.+++.++.+|++++ ..+|..... .-.|+... +++++.. ..|++++++| .+..
T Consensus 8 ~~l~~~~siaVV~Gasg~~G~~~~~~l~~~G~~~v~~VnP~~~g~--~i~G~~vy~sl~el~~~~~vD~avI~vP-~~~~ 84 (305)
T 2fp4_A 8 HLYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGK--THLGLPVFNTVKEAKEQTGATASVIYVP-PPFA 84 (305)
T ss_dssp GGCCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC--EETTEEEESSHHHHHHHHCCCEEEECCC-HHHH
T ss_pred HHHhCCCcEEEEECCCCCHHHHHHHHHHHCCCcEEEEeCCCcCcc--eECCeeeechHHHhhhcCCCCEEEEecC-HHHH
Confidence 344667889999 99 9999999999999999854 577764111 12466654 7999988 8999999999 3333
Q ss_pred cccccHhHhccCCCceEEEEccCCccc-cHHHHHHhHhcC
Q 007512 266 SKVLNDETFGKMKKGVRIINVARGGVI-DEEALVRALDSG 304 (600)
Q Consensus 266 ~~li~~~~l~~mk~gailvNvarg~iv-de~aL~~aL~~g 304 (600)
...+.+. .+ ..-. .+++.+.|-.. ++..+.+..++.
T Consensus 85 ~~~~~e~-i~-~Gi~-~iv~~t~G~~~~~~~~l~~~a~~~ 121 (305)
T 2fp4_A 85 AAAINEA-ID-AEVP-LVVCITEGIPQQDMVRVKHRLLRQ 121 (305)
T ss_dssp HHHHHHH-HH-TTCS-EEEECCCCCCHHHHHHHHHHHTTC
T ss_pred HHHHHHH-HH-CCCC-EEEEECCCCChHHHHHHHHHHHhc
Confidence 3333332 22 1211 34556655432 344677777665
No 403
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=94.10 E-value=0.038 Score=55.89 Aligned_cols=63 Identities=17% Similarity=0.268 Sum_probs=43.4
Q ss_pred CEEEEEe-cChhHHHHHHHhhc-CCCEEEE-ECCCCChhHHH--------HcCCcc-cCHHHHhccCCEEEEecC
Q 007512 198 KTLAVLG-FGKVGSEVARRAKG-LGMHVIA-HDPYAPADRAR--------AIGVDL-VSFDEAIATADFISLHMP 260 (600)
Q Consensus 198 ktiGIIG-lG~IG~~vA~~l~~-~g~~V~~-~d~~~~~~~a~--------~~g~~~-~~l~ell~~aDvV~l~~P 260 (600)
.+|+|+| +|+||+.+++.+.. -++++.+ +|+..+..... ..|+.. .++++++.++|+|+-++|
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~ 82 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTL 82 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSC
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCC
Confidence 5899999 99999999999875 4888887 68764211100 013332 367787778888877654
No 404
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=94.06 E-value=0.038 Score=57.73 Aligned_cols=65 Identities=23% Similarity=0.362 Sum_probs=47.1
Q ss_pred cCCEEEEEec-ChhHHHHHHHhhcCC--CEEEEECCCCChhHH-----HHc-----CCcc-cCHHHHhccCCEEEEecC
Q 007512 196 VGKTLAVLGF-GKVGSEVARRAKGLG--MHVIAHDPYAPADRA-----RAI-----GVDL-VSFDEAIATADFISLHMP 260 (600)
Q Consensus 196 ~gktiGIIGl-G~IG~~vA~~l~~~g--~~V~~~d~~~~~~~a-----~~~-----g~~~-~~l~ell~~aDvV~l~~P 260 (600)
.+++|+|||. |.+|..+|..+...| -+|..||........ ... .+.. .++.+.+++||+|+++.-
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 4689999998 999999998887666 489999986421111 111 1121 367788999999999864
No 405
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=94.05 E-value=0.035 Score=56.82 Aligned_cols=87 Identities=18% Similarity=0.146 Sum_probs=67.1
Q ss_pred cCCEEEEEe-cChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCccc------C-HHHHhccCCEEEEecCCCccccc
Q 007512 196 VGKTLAVLG-FGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLV------S-FDEAIATADFISLHMPLTPATSK 267 (600)
Q Consensus 196 ~gktiGIIG-lG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~------~-l~ell~~aDvV~l~~Pl~~~t~~ 267 (600)
.|.+|.|+| .|.+|...++.++.+|.+|++.+.....+.++++|+..+ + +.+.+...|+|+-|+.. +
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g~-~---- 226 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGG-D---- 226 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSCH-H----
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCCc-H----
Confidence 478999997 999999999999999999998864434566778887521 3 55666789999988862 1
Q ss_pred cccHhHhccCCCceEEEEccC
Q 007512 268 VLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 268 li~~~~l~~mk~gailvNvar 288 (600)
.. ...+..++++..++.++.
T Consensus 227 ~~-~~~~~~l~~~G~iv~~g~ 246 (321)
T 3tqh_A 227 VG-IQSIDCLKETGCIVSVPT 246 (321)
T ss_dssp HH-HHHGGGEEEEEEEEECCS
T ss_pred HH-HHHHHhccCCCEEEEeCC
Confidence 12 566788999999999864
No 406
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.01 E-value=0.054 Score=55.99 Aligned_cols=86 Identities=26% Similarity=0.414 Sum_probs=55.9
Q ss_pred cCCEEEEEec-ChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc-----CHHHH----hc--cCCEEEEecCCC
Q 007512 196 VGKTLAVLGF-GKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV-----SFDEA----IA--TADFISLHMPLT 262 (600)
Q Consensus 196 ~gktiGIIGl-G~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~-----~l~el----l~--~aDvV~l~~Pl~ 262 (600)
.|++|.|+|. |.||...++.++.+|.+|++.+++. ..+.+++.|...+ ++.+. .. ..|+|+-|+...
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~~ 238 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGP 238 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCchh
Confidence 5889999998 9999999999999999999998765 4556666665321 12111 11 356666665521
Q ss_pred ccccccccHhHhccCCCceEEEEcc
Q 007512 263 PATSKVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 263 ~~t~~li~~~~l~~mk~gailvNva 287 (600)
.-...+..|+++..++.++
T Consensus 239 ------~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 239 ------AFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp ------CHHHHHHTEEEEEEEEEC-
T ss_pred ------HHHHHHHhhcCCCEEEEEE
Confidence 1233455566666666654
No 407
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=94.01 E-value=0.037 Score=57.87 Aligned_cols=84 Identities=14% Similarity=0.258 Sum_probs=49.6
Q ss_pred CEEEEEe-cChhHHHHHHHhhcC-CCEEEEE-CCC-CC-hhHHHHc-------------CCccc--CHHHHhccCCEEEE
Q 007512 198 KTLAVLG-FGKVGSEVARRAKGL-GMHVIAH-DPY-AP-ADRARAI-------------GVDLV--SFDEAIATADFISL 257 (600)
Q Consensus 198 ktiGIIG-lG~IG~~vA~~l~~~-g~~V~~~-d~~-~~-~~~a~~~-------------g~~~~--~l~ell~~aDvV~l 257 (600)
.+|||+| .|.||+.+.+.|... .+++.+. +.. .. ....... .+... +.++ +..+|+|++
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~vDvVf~ 83 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HKDVDVVLS 83 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GTTCSEEEE
T ss_pred cEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hcCCCEEEE
Confidence 5899999 999999999999866 5688766 322 11 1111111 11122 3333 478999999
Q ss_pred ecCCCccccccccHhHhccCCCceEEEEcc
Q 007512 258 HMPLTPATSKVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 258 ~~Pl~~~t~~li~~~~l~~mk~gailvNva 287 (600)
|+|... +..+. -..++.|+.+||.+
T Consensus 84 atp~~~-s~~~a----~~~~~aG~~VId~s 108 (350)
T 2ep5_A 84 ALPNEL-AESIE----LELVKNGKIVVSNA 108 (350)
T ss_dssp CCCHHH-HHHHH----HHHHHTTCEEEECS
T ss_pred CCChHH-HHHHH----HHHHHCCCEEEECC
Confidence 998332 22211 11235577777765
No 408
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=94.00 E-value=0.088 Score=55.17 Aligned_cols=65 Identities=17% Similarity=0.192 Sum_probs=47.5
Q ss_pred CEEEEEe-cChhHHH-HH----HHhhcC-CCEE----------EEECCCCC--hhHHHHcCCc--ccCHHHHhcc--CCE
Q 007512 198 KTLAVLG-FGKVGSE-VA----RRAKGL-GMHV----------IAHDPYAP--ADRARAIGVD--LVSFDEAIAT--ADF 254 (600)
Q Consensus 198 ktiGIIG-lG~IG~~-vA----~~l~~~-g~~V----------~~~d~~~~--~~~a~~~g~~--~~~l~ell~~--aDv 254 (600)
.+||||| +|.+|+. .+ +.++.. +..+ .++|++.. ...+.+.|+. +.++++++++ .|+
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~iD~ 86 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADKNDTM 86 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSSCCE
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCE
Confidence 4799999 9999998 66 666643 3332 37888773 2345567874 4589999965 899
Q ss_pred EEEecCCC
Q 007512 255 ISLHMPLT 262 (600)
Q Consensus 255 V~l~~Pl~ 262 (600)
|++|+|..
T Consensus 87 V~i~tp~~ 94 (383)
T 3oqb_A 87 FFDAATTQ 94 (383)
T ss_dssp EEECSCSS
T ss_pred EEECCCch
Confidence 99999943
No 409
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.99 E-value=0.056 Score=53.63 Aligned_cols=64 Identities=16% Similarity=0.217 Sum_probs=47.8
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCCh-hHHHHcCCccc-----CHHHHhccCCEEEEecCCC
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPA-DRARAIGVDLV-----SFDEAIATADFISLHMPLT 262 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~-~~a~~~g~~~~-----~l~ell~~aDvV~l~~Pl~ 262 (600)
.++|.|.|.|.||+.+++.|...|++|++.++.... ......+++.+ +++ +..+|+|+.+....
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAPD 74 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCCB
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc--cCCCCEEEECCCcc
Confidence 478999999999999999999889999999887632 22333454322 333 77899998877644
No 410
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=93.97 E-value=0.021 Score=59.39 Aligned_cols=102 Identities=18% Similarity=0.131 Sum_probs=58.3
Q ss_pred CEEEEEecChhHHHHHHHhhcC---------CCEEEE-ECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccc
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL---------GMHVIA-HDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSK 267 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~---------g~~V~~-~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~ 267 (600)
.+|||||+|.||+.+++.++.. +++|.+ +|++..............++++++ +.|+|+.|+|.......
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~~~~~~~~~d~~~ll-~iDvVve~t~~~~~a~~ 82 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAIPQELLRAEPFDLL-EADLVVEAMGGVEAPLR 82 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCSSCGGGEESSCCCCT-TCSEEEECCCCSHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhccCcccccCCHHHHh-CCCEEEECCCCcHHHHH
Confidence 3799999999999999998754 467655 576542111000111234778888 99999999984421111
Q ss_pred cccHhHhccCCCceEEEEccCCccc-cHHHHHHhHhcC
Q 007512 268 VLNDETFGKMKKGVRIINVARGGVI-DEEALVRALDSG 304 (600)
Q Consensus 268 li~~~~l~~mk~gailvNvarg~iv-de~aL~~aL~~g 304 (600)
+ ..+.|+.|.-++-.....+. ..++|.++.+++
T Consensus 83 ~----~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 83 L----VLPALEAGIPLITANKALLAEAWESLRPFAEEG 116 (332)
T ss_dssp H----HHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT
T ss_pred H----HHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC
Confidence 1 12234445444443222222 345666655554
No 411
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=93.89 E-value=0.2 Score=53.68 Aligned_cols=34 Identities=38% Similarity=0.492 Sum_probs=31.8
Q ss_pred ceeccCCEEEEEecChhHHHHHHHhhcCCCEEEE
Q 007512 192 GVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIA 225 (600)
Q Consensus 192 g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~ 225 (600)
|.++.|+++.|.|+|.+|+.+|+.|...|.+|++
T Consensus 205 g~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVa 238 (421)
T 1v9l_A 205 WGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIA 238 (421)
T ss_dssp HSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEE
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEE
Confidence 5689999999999999999999999999999985
No 412
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=93.85 E-value=0.084 Score=53.23 Aligned_cols=38 Identities=32% Similarity=0.313 Sum_probs=34.1
Q ss_pred eeccCCEEEEEe-cChhHHHHHHHhhcCCCEEEEECCCC
Q 007512 193 VSLVGKTLAVLG-FGKVGSEVARRAKGLGMHVIAHDPYA 230 (600)
Q Consensus 193 ~~l~gktiGIIG-lG~IG~~vA~~l~~~g~~V~~~d~~~ 230 (600)
..+.||++.|+| .|-||+.+++.|...|.+|+.+++..
T Consensus 115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 356789999999 99999999999999999999998764
No 413
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=93.84 E-value=0.16 Score=53.13 Aligned_cols=90 Identities=27% Similarity=0.313 Sum_probs=65.6
Q ss_pred cCCEEEEEe-cChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCccc------CHHHHh---ccCCEEEEecCCCccc
Q 007512 196 VGKTLAVLG-FGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLV------SFDEAI---ATADFISLHMPLTPAT 265 (600)
Q Consensus 196 ~gktiGIIG-lG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~------~l~ell---~~aDvV~l~~Pl~~~t 265 (600)
.|++|.|+| .|.||...++.++..|.+|++.+.....+.++++|...+ ++.+.+ ...|+|+-++.....+
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~ 262 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTET 262 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTTHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCChhhh
Confidence 588999999 799999999999999999998874335566778887431 233322 3589999988733111
Q ss_pred cccccHhHhccCCCceEEEEccCC
Q 007512 266 SKVLNDETFGKMKKGVRIINVARG 289 (600)
Q Consensus 266 ~~li~~~~l~~mk~gailvNvarg 289 (600)
-...+..++++..++.++..
T Consensus 263 ----~~~~~~~l~~~G~iv~~g~~ 282 (375)
T 2vn8_A 263 ----WAPDFLKKWSGATYVTLVTP 282 (375)
T ss_dssp ----HGGGGBCSSSCCEEEESCCS
T ss_pred ----hHHHHHhhcCCcEEEEeCCC
Confidence 13456678999999999853
No 414
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=93.79 E-value=0.04 Score=56.82 Aligned_cols=86 Identities=15% Similarity=0.265 Sum_probs=57.7
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCccc-----C---HHHH-hccCCEEEEecCCCccccc
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLV-----S---FDEA-IATADFISLHMPLTPATSK 267 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~-----~---l~el-l~~aDvV~l~~Pl~~~t~~ 267 (600)
.+++.|+|+|.+|+.+++.|...|. |++.|+++..-...+.++... + |+++ +++||.+++++|..+ ..
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~--~n 191 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDS--ET 191 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHHHHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHH--HH
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhhHHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccH--HH
Confidence 5689999999999999999999999 999998763322445565322 2 3444 778999999887432 23
Q ss_pred cccHhHhccCCCceEEEE
Q 007512 268 VLNDETFGKMKKGVRIIN 285 (600)
Q Consensus 268 li~~~~l~~mk~gailvN 285 (600)
+.-......+.+...++-
T Consensus 192 ~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 192 IHCILGIRKIDESVRIIA 209 (336)
T ss_dssp HHHHHHHHTTCTTSEEEE
T ss_pred HHHHHHHHHHCCCCeEEE
Confidence 333344555666544443
No 415
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=93.76 E-value=0.049 Score=56.16 Aligned_cols=86 Identities=16% Similarity=0.164 Sum_probs=57.6
Q ss_pred cCCEEEEEecC-hhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc------CHHHHh------ccCCEEEEecCC
Q 007512 196 VGKTLAVLGFG-KVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV------SFDEAI------ATADFISLHMPL 261 (600)
Q Consensus 196 ~gktiGIIGlG-~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~------~l~ell------~~aDvV~l~~Pl 261 (600)
.|++|.|+|.| .||...++.++..|++|++.+++. ..+.+++.|...+ ++.+.+ ...|+|+-|+..
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 223 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGG 223 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCC
Confidence 48899999998 999999999999999999998766 5566777776421 222211 146777666552
Q ss_pred CccccccccHhHhccCCCceEEEEcc
Q 007512 262 TPATSKVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 262 ~~~t~~li~~~~l~~mk~gailvNva 287 (600)
. .+ ...+..++++..++.++
T Consensus 224 ~-~~-----~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 224 P-DG-----NELAFSLRPNGHFLTIG 243 (340)
T ss_dssp H-HH-----HHHHHTEEEEEEEEECC
T ss_pred h-hH-----HHHHHHhcCCCEEEEEe
Confidence 1 11 22334566777777665
No 416
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=93.75 E-value=0.3 Score=52.89 Aligned_cols=34 Identities=21% Similarity=0.298 Sum_probs=31.6
Q ss_pred ceeccCCEEEEEecChhHHHHHHHhhcCCCEEEE
Q 007512 192 GVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIA 225 (600)
Q Consensus 192 g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~ 225 (600)
|.++.|+|+.|-|+|++|+..|+.|...|.+|++
T Consensus 247 G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVa 280 (470)
T 2bma_A 247 NIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLT 280 (470)
T ss_dssp TCCGGGCEEEEECSSHHHHHHHHHHHHTTCEECE
T ss_pred cCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEE
Confidence 5678999999999999999999999999999984
No 417
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=93.75 E-value=0.032 Score=53.39 Aligned_cols=64 Identities=13% Similarity=0.151 Sum_probs=45.2
Q ss_pred CEEEEEe-cChhHHHHHHHhh-cCCCEEEEECCCCC-hhHH---HHcCCc-----c---cCHHHHhccCCEEEEecCC
Q 007512 198 KTLAVLG-FGKVGSEVARRAK-GLGMHVIAHDPYAP-ADRA---RAIGVD-----L---VSFDEAIATADFISLHMPL 261 (600)
Q Consensus 198 ktiGIIG-lG~IG~~vA~~l~-~~g~~V~~~d~~~~-~~~a---~~~g~~-----~---~~l~ell~~aDvV~l~~Pl 261 (600)
|++.|.| .|.||+.+++.|. ..|++|++.+++.. .... ...++. . .+++++++.+|+|+.++..
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~ 83 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAME 83 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCC
Confidence 6799999 6999999999999 89999999987643 2111 111221 1 1355677888888887763
No 418
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=93.73 E-value=0.059 Score=54.87 Aligned_cols=85 Identities=15% Similarity=0.113 Sum_probs=57.6
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc--CHHHHhccCCEEEEecCCCccccccccHh
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV--SFDEAIATADFISLHMPLTPATSKVLNDE 272 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~--~l~ell~~aDvV~l~~Pl~~~t~~li~~~ 272 (600)
.|++|.|+|.|.+|...++.++.+|++|++.+ +. ..+.++++|+..+ +.+++-...|+|+-|+... .+ ..
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v~~g~Dvv~d~~g~~-~~-----~~ 214 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYREPSQVTQKYFAIFDAVNSQ-NA-----AA 214 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEESSGGGCCSCEEEEECC-------------T
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEcCHHHhCCCccEEEECCCch-hH-----HH
Confidence 48899999999999999999999999999999 54 6677788886432 2222223467777666522 11 23
Q ss_pred HhccCCCceEEEEcc
Q 007512 273 TFGKMKKGVRIINVA 287 (600)
Q Consensus 273 ~l~~mk~gailvNva 287 (600)
.+..++++..++.++
T Consensus 215 ~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 215 LVPSLKANGHIICIQ 229 (315)
T ss_dssp TGGGEEEEEEEEEEC
T ss_pred HHHHhcCCCEEEEEe
Confidence 455677777777764
No 419
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.63 E-value=0.052 Score=56.41 Aligned_cols=86 Identities=16% Similarity=0.246 Sum_probs=57.6
Q ss_pred cCCEEEEE-ecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc------CHHHHhc-----cCCEEEEecCCC
Q 007512 196 VGKTLAVL-GFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV------SFDEAIA-----TADFISLHMPLT 262 (600)
Q Consensus 196 ~gktiGII-GlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~------~l~ell~-----~aDvV~l~~Pl~ 262 (600)
.|++|.|+ |.|.||..+++.++..|++|++.+++. ..+.+++.|...+ ++.+.+. ..|+|+-|+..
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~- 245 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGA- 245 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCG-
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCH-
Confidence 58899999 689999999999999999999998765 3455666665321 2222221 36777666652
Q ss_pred ccccccccHhHhccCCCceEEEEcc
Q 007512 263 PATSKVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 263 ~~t~~li~~~~l~~mk~gailvNva 287 (600)
+ .-...+..|+++..++.++
T Consensus 246 ~-----~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 246 A-----YFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp G-----GHHHHHHTEEEEEEEEECC
T ss_pred H-----HHHHHHHHhccCCEEEEEE
Confidence 1 1233455566666666665
No 420
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.62 E-value=0.052 Score=56.19 Aligned_cols=45 Identities=33% Similarity=0.538 Sum_probs=37.8
Q ss_pred cCCEEEEE-ecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCC
Q 007512 196 VGKTLAVL-GFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGV 240 (600)
Q Consensus 196 ~gktiGII-GlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~ 240 (600)
.|++|.|+ |.|.||...++.++.+|++|++.++.. ..+.++++|.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa 196 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGA 196 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC
Confidence 68999999 799999999999999999999999865 3455556664
No 421
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=93.56 E-value=0.056 Score=56.17 Aligned_cols=86 Identities=17% Similarity=0.232 Sum_probs=51.6
Q ss_pred CEEEEEecChhHHHHHHHhhcC---CCEEEEECCCCChhHHH-------Hc-----------------C--Cccc---CH
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL---GMHVIAHDPYAPADRAR-------AI-----------------G--VDLV---SF 245 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~---g~~V~~~d~~~~~~~a~-------~~-----------------g--~~~~---~l 245 (600)
.+|||+|+|+||+.+.|.|... +++|.+.+...+.+... .. | +... +.
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp 80 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP 80 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCCh
Confidence 4799999999999999998754 58988664322111110 00 1 0111 33
Q ss_pred HHH-hc--cCCEEEEecCCCccccccccHhHhccCCCce--EEEEccC
Q 007512 246 DEA-IA--TADFISLHMPLTPATSKVLNDETFGKMKKGV--RIINVAR 288 (600)
Q Consensus 246 ~el-l~--~aDvV~l~~Pl~~~t~~li~~~~l~~mk~ga--ilvNvar 288 (600)
+++ +. .+|+|+.|+|... ++... -..++.|+ ++|+.+.
T Consensus 81 ~~l~w~~~~vDvV~~atg~~~-s~e~a----~~~l~aGakkvVId~~a 123 (332)
T 1hdg_O 81 SKLPWKDLGVDFVIESTGVFR-NREKA----ELHLQAGAKKVIITAPA 123 (332)
T ss_dssp GGSCHHHHTCCEEEECSSSCC-BHHHH----THHHHTTCSEEEESSCC
T ss_pred HHCcccccCCCEEEECCccch-hHHHH----HHHHHcCCcEEEEeCCC
Confidence 333 33 7999999999543 22222 12245678 9999764
No 422
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=93.54 E-value=0.079 Score=57.94 Aligned_cols=107 Identities=14% Similarity=0.237 Sum_probs=67.2
Q ss_pred CCEEEEEecChhHHH-HHHHhhcCCCEEEEECCCCCh--hHHHHcCCccc--CHHHHhccCCEEEEe--cCCC-ccc---
Q 007512 197 GKTLAVLGFGKVGSE-VARRAKGLGMHVIAHDPYAPA--DRARAIGVDLV--SFDEAIATADFISLH--MPLT-PAT--- 265 (600)
Q Consensus 197 gktiGIIGlG~IG~~-vA~~l~~~g~~V~~~d~~~~~--~~a~~~g~~~~--~l~ell~~aDvV~l~--~Pl~-~~t--- 265 (600)
.|+|.|||+|.+|.+ +|+.|+..|++|.++|...+. +...+.|+... .-.+.+..+|+|++. +|.+ |+.
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~~~d~vV~Spgi~~~~p~~~~a 101 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHHRPENVLDASVVVVSTAISADNPEIVAA 101 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCGGGGTTCSEEEECTTSCTTCHHHHHH
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCCCHHHcCCCCEEEECCCCCCCCHHHHHH
Confidence 579999999999997 899999999999999976543 33456687543 123456789999886 3322 111
Q ss_pred --c--ccccHh-Hhcc-CCCc-eEEEEccCCccccHHHHHHhHhc
Q 007512 266 --S--KVLNDE-TFGK-MKKG-VRIINVARGGVIDEEALVRALDS 303 (600)
Q Consensus 266 --~--~li~~~-~l~~-mk~g-ailvNvarg~ivde~aL~~aL~~ 303 (600)
+ .++.+- .+.. ++.. .+-|-=+.|+.-...-+...|+.
T Consensus 102 ~~~gi~v~~~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~ 146 (494)
T 4hv4_A 102 REARIPVIRRAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAE 146 (494)
T ss_dssp HHTTCCEEEHHHHHHHHHTTSEEEEEECSSSHHHHHHHHHHHHHH
T ss_pred HHCCCCEEcHHHHHHHHhcCCCEEEEecCCChHHHHHHHHHHHHh
Confidence 1 123332 2332 3432 23333346887655555666655
No 423
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=93.46 E-value=0.062 Score=55.14 Aligned_cols=45 Identities=31% Similarity=0.317 Sum_probs=36.4
Q ss_pred cCCEEEEEec-ChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCC
Q 007512 196 VGKTLAVLGF-GKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGV 240 (600)
Q Consensus 196 ~gktiGIIGl-G~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~ 240 (600)
.|+++.|.|. |.||..+++.++..|++|++.|++. ..+.+++.|.
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~ 191 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGF 191 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC
Confidence 5889999998 9999999999999999999998764 2334445554
No 424
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=93.45 E-value=0.074 Score=54.18 Aligned_cols=62 Identities=18% Similarity=0.169 Sum_probs=40.7
Q ss_pred CEEEEEe-cChhHHHHHHHhhcC-CCEEEE-ECCCCChhH----HH-----HcCCcc-cCHHHHhccCCEEEEec
Q 007512 198 KTLAVLG-FGKVGSEVARRAKGL-GMHVIA-HDPYAPADR----AR-----AIGVDL-VSFDEAIATADFISLHM 259 (600)
Q Consensus 198 ktiGIIG-lG~IG~~vA~~l~~~-g~~V~~-~d~~~~~~~----a~-----~~g~~~-~~l~ell~~aDvV~l~~ 259 (600)
.+|+|+| +|+||+.+++.+... ++++.+ +|+..+... .. ..|+.. .++++++.++|+|+-+.
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT 96 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFS 96 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECS
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcC
Confidence 4899999 999999999998754 898776 576542111 11 123332 26777777777766544
No 425
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.45 E-value=0.093 Score=55.09 Aligned_cols=46 Identities=33% Similarity=0.381 Sum_probs=38.4
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCC-CEEEEECCCC-ChhHHHHcCCc
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLG-MHVIAHDPYA-PADRARAIGVD 241 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g-~~V~~~d~~~-~~~~a~~~g~~ 241 (600)
.|++|.|+|.|.+|...++.++.+| .+|++.++.. ..+.++++|..
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~ 242 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD 242 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCc
Confidence 4889999999999999999999999 6999999765 34556667753
No 426
>3kzn_A Aotcase, N-acetylornithine carbamoyltransferase; transcarbamylase, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: KCX AOR; 1.80A {Xanthomonas campestris PV} PDB: 3kzc_A* 3kzm_A* 3kzk_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 3l05_A* 3l02_A* 3m4n_A* 3l06_A* 3l04_A*
Probab=93.43 E-value=1 Score=47.13 Aligned_cols=102 Identities=21% Similarity=0.122 Sum_probs=67.4
Q ss_pred hHHHhCCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecC-------hhHH
Q 007512 138 AAATEFGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFG-------KVGS 210 (600)
Q Consensus 138 ~aa~~~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG-------~IG~ 210 (600)
..++...|+|+|. |.+.-++ .+++=++.+.+++ ...++.|++++++|.+ ++..
T Consensus 151 ~~a~~~~vPVIN~-g~~~HPt--QaL~Dl~Ti~e~~-----------------G~~dl~g~kv~~~~~~~gd~~~~~Va~ 210 (359)
T 3kzn_A 151 SFAKYSPVPVINM-ETITHPC--QELAHALALQEHF-----------------GTPDLRGKKYVLTWTYHPKPLNTAVAN 210 (359)
T ss_dssp HHHHHCSSCEEES-SSSCCHH--HHHHHHHHHHHHH-----------------TSSCCTTCEEEEEECCCSSCCCSHHHH
T ss_pred HHHHhCCCcccCc-ccccCch--HHHHHHHHHHHHc-----------------CCccccCCeEEEEEeecCCccccchhh
Confidence 4556678999996 5444443 2333334333311 1236889999999763 6889
Q ss_pred HHHHHhhcCCCEEEEECCCC----Chh-------HHHHcCCc---ccCHHHHhccCCEEEEec
Q 007512 211 EVARRAKGLGMHVIAHDPYA----PAD-------RARAIGVD---LVSFDEAIATADFISLHM 259 (600)
Q Consensus 211 ~vA~~l~~~g~~V~~~d~~~----~~~-------~a~~~g~~---~~~l~ell~~aDvV~l~~ 259 (600)
+....+..+|++|..+-|.+ +.+ .+.+.|.. ..++++++++||+|..-.
T Consensus 211 S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDvvyt~r 273 (359)
T 3kzn_A 211 SALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYAKS 273 (359)
T ss_dssp HHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHHHHTTCSEEEEEC
T ss_pred hhHHHHHhccccEEEEecccccCCCHHHHHHHHHHHHhhCCCcccccCHHHHhcCCeEEEEEE
Confidence 99999999999999887742 111 12334543 238999999999998754
No 427
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=93.42 E-value=0.051 Score=56.62 Aligned_cols=87 Identities=16% Similarity=0.179 Sum_probs=54.3
Q ss_pred CEEEEEe-cChhHHHHHHHhhcC-CCEEEEECCCC---Ch--hHHH----HcC---Cccc---CHHHHhccCCEEEEecC
Q 007512 198 KTLAVLG-FGKVGSEVARRAKGL-GMHVIAHDPYA---PA--DRAR----AIG---VDLV---SFDEAIATADFISLHMP 260 (600)
Q Consensus 198 ktiGIIG-lG~IG~~vA~~l~~~-g~~V~~~d~~~---~~--~~a~----~~g---~~~~---~l~ell~~aDvV~l~~P 260 (600)
.+|+|+| .|.+|+.+.++|... ++++....... +. .... -.| .... +.++++.++|+|++|+|
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a~p 84 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATA 84 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEECSC
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEECCC
Confidence 4899999 699999999999875 67877653221 11 1110 012 1222 34555589999999999
Q ss_pred CCccccccccHhHhccCCCceEEEEccCC
Q 007512 261 LTPATSKVLNDETFGKMKKGVRIINVARG 289 (600)
Q Consensus 261 l~~~t~~li~~~~l~~mk~gailvNvarg 289 (600)
... ++.+.. ..++.|+.+||.+.-
T Consensus 85 ~~~-s~~~~~----~~~~~g~~vIDlSa~ 108 (337)
T 3dr3_A 85 HEV-SHDLAP----QFLEAGCVVFDLSGA 108 (337)
T ss_dssp HHH-HHHHHH----HHHHTTCEEEECSST
T ss_pred hHH-HHHHHH----HHHHCCCEEEEcCCc
Confidence 332 222211 124679999999854
No 428
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.39 E-value=0.069 Score=49.83 Aligned_cols=66 Identities=17% Similarity=0.190 Sum_probs=47.4
Q ss_pred CCEEEEEec-ChhHHHHHHHhhcCCCEEEEECCCCChhHHH-HcCCcc--------cCHHHHhccCCEEEEecCCC
Q 007512 197 GKTLAVLGF-GKVGSEVARRAKGLGMHVIAHDPYAPADRAR-AIGVDL--------VSFDEAIATADFISLHMPLT 262 (600)
Q Consensus 197 gktiGIIGl-G~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~-~~g~~~--------~~l~ell~~aDvV~l~~Pl~ 262 (600)
+++|.|.|. |.||+.+++.|...|.+|++.++........ ..++.. .++.++++.+|+|+.+....
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~ 78 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR 78 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCC
Confidence 478999997 9999999999998899999998765221100 122321 13557788899998887643
No 429
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.38 E-value=0.058 Score=55.39 Aligned_cols=45 Identities=24% Similarity=0.265 Sum_probs=37.8
Q ss_pred cCCEEEEEe-cChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCC
Q 007512 196 VGKTLAVLG-FGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGV 240 (600)
Q Consensus 196 ~gktiGIIG-lG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~ 240 (600)
.|+++.|+| .|.||...++.++..|.+|++.+++. ..+.+++.|.
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga 194 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGA 194 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC
Confidence 588999999 89999999999999999999998865 3445666665
No 430
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=93.36 E-value=0.058 Score=55.24 Aligned_cols=86 Identities=16% Similarity=0.165 Sum_probs=56.0
Q ss_pred cCCEEEEEe-cChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc------CHHHHh------ccCCEEEEecCC
Q 007512 196 VGKTLAVLG-FGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV------SFDEAI------ATADFISLHMPL 261 (600)
Q Consensus 196 ~gktiGIIG-lG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~------~l~ell------~~aDvV~l~~Pl 261 (600)
.|+++.|+| .|.||...++.++..|.+|++.++.. ..+.+++.|...+ ++.+.+ ...|+|+-++..
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 219 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQ 219 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCG
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCCh
Confidence 488999999 89999999999999999999998765 3455666665321 121111 135666665542
Q ss_pred CccccccccHhHhccCCCceEEEEcc
Q 007512 262 TPATSKVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 262 ~~~t~~li~~~~l~~mk~gailvNva 287 (600)
+ .-...+..|+++..++.++
T Consensus 220 -~-----~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 220 -D-----TWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp -G-----GHHHHHTTEEEEEEEEECC
T ss_pred -H-----HHHHHHHHhcCCCEEEEEe
Confidence 1 1233455566666666665
No 431
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=93.36 E-value=0.21 Score=53.49 Aligned_cols=107 Identities=27% Similarity=0.392 Sum_probs=68.3
Q ss_pred ceeccCCEEEEEecChhHHHHHHHhhcCCCEEEE--------ECCCC-ChhHH----HHcC-Cc--ccCHHHHh-ccCCE
Q 007512 192 GVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIA--------HDPYA-PADRA----RAIG-VD--LVSFDEAI-ATADF 254 (600)
Q Consensus 192 g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~--------~d~~~-~~~~a----~~~g-~~--~~~l~ell-~~aDv 254 (600)
|.++.|+++.|.|+|.+|+.+|+.|...|.+|++ |||.. +.+.. .+.| +. ..+-++++ ..||+
T Consensus 213 g~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~~~~~~e~~~~~~DV 292 (419)
T 3aoe_E 213 GLDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDLAPEEVFGLEAEV 292 (419)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCCCBCTTTGGGSSCSE
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcceeeccchhhhccCceE
Confidence 5578999999999999999999999999999984 34433 32221 1222 11 11223333 47999
Q ss_pred EEEecCCCccccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 255 ISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 255 V~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
++-|.. .+.++.+....++- .+|+..+-+++ ..++- +.|.+..|
T Consensus 293 liP~A~-----~n~i~~~~A~~l~a-k~V~EgAN~p~-t~~A~-~~L~~~Gi 336 (419)
T 3aoe_E 293 LVLAAR-----EGALDGDRARQVQA-QAVVEVANFGL-NPEAE-AYLLGKGA 336 (419)
T ss_dssp EEECSC-----TTCBCHHHHTTCCC-SEEEECSTTCB-CHHHH-HHHHHHTC
T ss_pred EEeccc-----ccccccchHhhCCc-eEEEECCCCcC-CHHHH-HHHHHCCC
Confidence 988875 34466666666643 37778787776 34433 34544433
No 432
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=93.30 E-value=0.048 Score=56.89 Aligned_cols=87 Identities=17% Similarity=0.174 Sum_probs=57.4
Q ss_pred cCCEEEEEe-cChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc------CHHHHhc-----cCCEEEEecCCC
Q 007512 196 VGKTLAVLG-FGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV------SFDEAIA-----TADFISLHMPLT 262 (600)
Q Consensus 196 ~gktiGIIG-lG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~------~l~ell~-----~aDvV~l~~Pl~ 262 (600)
.|+++.|+| .|.||..+++.++..|++|++.++.. ..+.+++.|...+ ++.+.+. ..|+|+-++..
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~- 241 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG- 241 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECSCT-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECCCH-
Confidence 488999999 79999999999999999999998765 3455666665321 2222221 35666666552
Q ss_pred ccccccccHhHhccCCCceEEEEccC
Q 007512 263 PATSKVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 263 ~~t~~li~~~~l~~mk~gailvNvar 288 (600)
+ .-...+..|+++..++.++.
T Consensus 242 ~-----~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 242 A-----MFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp H-----HHHHHHHHEEEEEEEEECCC
T ss_pred H-----HHHHHHHHHhcCCEEEEEeC
Confidence 1 12334555666666666653
No 433
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=93.29 E-value=0.11 Score=56.48 Aligned_cols=113 Identities=13% Similarity=0.108 Sum_probs=67.3
Q ss_pred CCEEEEEecChh-HHHHHHHhhc----C-CCEEEEECCCCChhH-----HH----HcCC----cc-cCHHHHhccCCEEE
Q 007512 197 GKTLAVLGFGKV-GSEVARRAKG----L-GMHVIAHDPYAPADR-----AR----AIGV----DL-VSFDEAIATADFIS 256 (600)
Q Consensus 197 gktiGIIGlG~I-G~~vA~~l~~----~-g~~V~~~d~~~~~~~-----a~----~~g~----~~-~~l~ell~~aDvV~ 256 (600)
.++|+|||.|.. |..+|..|.. + +.+|..||....... .. ..+. .. .++++.++.||+|+
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~VV 107 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM 107 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEEE
Confidence 469999999998 5556655543 3 668999998752211 01 1122 22 37888999999999
Q ss_pred EecCCCcc---cc--------cc--------------------cc--HhHhccCCCceEEEEccCCccccHHHHHHhHhc
Q 007512 257 LHMPLTPA---TS--------KV--------------------LN--DETFGKMKKGVRIINVARGGVIDEEALVRALDS 303 (600)
Q Consensus 257 l~~Pl~~~---t~--------~l--------------------i~--~~~l~~mk~gailvNvarg~ivde~aL~~aL~~ 303 (600)
+++|.... ++ ++ +- .+.+....|+++++|++---=+-..++.+....
T Consensus 108 iaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~T~~~~k~~p~ 187 (472)
T 1u8x_X 108 AHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPN 187 (472)
T ss_dssp ECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHHHHHSTT
T ss_pred EcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhCCC
Confidence 99996320 11 00 00 012333568999999865332334555554444
Q ss_pred CCceEE
Q 007512 304 GRVAQA 309 (600)
Q Consensus 304 g~i~ga 309 (600)
.++.|.
T Consensus 188 ~rViG~ 193 (472)
T 1u8x_X 188 SKILNI 193 (472)
T ss_dssp CCEEEC
T ss_pred CCEEEe
Confidence 467664
No 434
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=93.29 E-value=0.13 Score=52.54 Aligned_cols=65 Identities=17% Similarity=0.170 Sum_probs=43.4
Q ss_pred CEEEEEe-cChhHHHHHHHhhcCCC--EEEEECC--CCChhH--HHHc--------CCcc-cCHHHHhccCCEEEEecCC
Q 007512 198 KTLAVLG-FGKVGSEVARRAKGLGM--HVIAHDP--YAPADR--ARAI--------GVDL-VSFDEAIATADFISLHMPL 261 (600)
Q Consensus 198 ktiGIIG-lG~IG~~vA~~l~~~g~--~V~~~d~--~~~~~~--a~~~--------g~~~-~~l~ell~~aDvV~l~~Pl 261 (600)
++|+|+| .|.+|..++..|...|. ++..+|. ...... +.++ .+.. .+-.+.++.||+|+++.+.
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~ag~ 80 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAGI 80 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcCCC
Confidence 4799999 99999999999875554 7888997 431111 1110 0111 0225679999999999874
Q ss_pred C
Q 007512 262 T 262 (600)
Q Consensus 262 ~ 262 (600)
.
T Consensus 81 ~ 81 (303)
T 1o6z_A 81 P 81 (303)
T ss_dssp C
T ss_pred C
Confidence 3
No 435
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=93.28 E-value=0.16 Score=56.57 Aligned_cols=37 Identities=22% Similarity=0.291 Sum_probs=33.2
Q ss_pred eeccCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCC
Q 007512 193 VSLVGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPY 229 (600)
Q Consensus 193 ~~l~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~ 229 (600)
..|++++|.|||+|-+|..+|+.|...|. ++..+|..
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 57999999999999999999999998886 78888754
No 436
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.23 E-value=0.052 Score=55.76 Aligned_cols=87 Identities=20% Similarity=0.217 Sum_probs=56.5
Q ss_pred cCCEEEEEec-ChhHHHHHHHhhcCCCEEEEECCCC-ChhHH-HHcCCccc------CHHHHh-----ccCCEEEEecCC
Q 007512 196 VGKTLAVLGF-GKVGSEVARRAKGLGMHVIAHDPYA-PADRA-RAIGVDLV------SFDEAI-----ATADFISLHMPL 261 (600)
Q Consensus 196 ~gktiGIIGl-G~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a-~~~g~~~~------~l~ell-----~~aDvV~l~~Pl 261 (600)
.|+++.|+|. |.||..+++.++..|++|++.+++. ..+.+ ++.|...+ ++.+.+ ...|+|+-++..
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 228 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGG 228 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCCc
Confidence 4889999999 9999999999999999999998765 33444 55665321 122221 135666665541
Q ss_pred CccccccccHhHhccCCCceEEEEccC
Q 007512 262 TPATSKVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 262 ~~~t~~li~~~~l~~mk~gailvNvar 288 (600)
+ .-...+..|+++..++.++.
T Consensus 229 -~-----~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 229 -E-----ILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp -H-----HHHHHHTTEEEEEEEEECCC
T ss_pred -c-----hHHHHHHHHhhCCEEEEEee
Confidence 1 12334555666666666653
No 437
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=93.19 E-value=0.15 Score=56.86 Aligned_cols=74 Identities=18% Similarity=0.281 Sum_probs=52.2
Q ss_pred CceeecCCCC-ChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccc-eeccCCEEEEEecChhHHHHHHHhhcCCC
Q 007512 144 GCLVVNAPTA-NTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVG-VSLVGKTLAVLGFGKVGSEVARRAKGLGM 221 (600)
Q Consensus 144 GI~V~n~p~~-~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g-~~l~gktiGIIGlG~IG~~vA~~l~~~g~ 221 (600)
+-..++-... +....||.+.-+-|-+.| |.-....| ..|++++|.|||+|-+|..+|+.|...|.
T Consensus 284 ~~~~~~l~~~~dp~~la~~~~~Lnlklm~-------------wRllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aGV 350 (615)
T 4gsl_A 284 APRVVDLSSLLDPLKIADQSVDLNLKLMK-------------WRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV 350 (615)
T ss_dssp CCEEEECHHHHCHHHHHHHHHHHHHHHHH-------------HHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred ceeEEeccccCCHHHHHhhhhhhhhHHHH-------------HhhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 3455554433 666778887777665554 32111123 36899999999999999999999998886
Q ss_pred -EEEEECCCC
Q 007512 222 -HVIAHDPYA 230 (600)
Q Consensus 222 -~V~~~d~~~ 230 (600)
++..+|...
T Consensus 351 G~ItLvD~D~ 360 (615)
T 4gsl_A 351 RKITFVDNGT 360 (615)
T ss_dssp CEEEEECCCB
T ss_pred CEEEEEcCCC
Confidence 788888643
No 438
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=93.18 E-value=0.098 Score=54.30 Aligned_cols=31 Identities=26% Similarity=0.527 Sum_probs=26.1
Q ss_pred EEEEEecChhHHHHHHHhhcC-CCEEEEECCC
Q 007512 199 TLAVLGFGKVGSEVARRAKGL-GMHVIAHDPY 229 (600)
Q Consensus 199 tiGIIGlG~IG~~vA~~l~~~-g~~V~~~d~~ 229 (600)
+|||+|+|+||+.+.|.+... .++|.+....
T Consensus 3 kVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~ 34 (330)
T 1gad_O 3 KVGINGFGRIGRIVFRAAQKRSDIEIVAINDL 34 (330)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEECS
T ss_pred EEEEECcCHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 799999999999999998865 6888876443
No 439
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=93.13 E-value=0.54 Score=50.64 Aligned_cols=125 Identities=16% Similarity=0.099 Sum_probs=92.8
Q ss_pred CCceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEecChhHHHHHHHhhcCCC-
Q 007512 143 FGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGM- 221 (600)
Q Consensus 143 ~GI~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGlG~IG~~vA~~l~~~g~- 221 (600)
..|.|.|.- -..+|--+++-+++.+| ..|..|...+|.|.|.|.-|-.+|+.+...|.
T Consensus 186 ~~ipvFnDD---~qGTA~V~lAgllnAlk------------------i~gk~l~d~riV~~GAGaAGigia~ll~~~G~~ 244 (487)
T 3nv9_A 186 CDIPVWHDD---QQGTASVTLAGLLNALK------------------LVKKDIHECRMVFIGAGSSNTTCLRLIVTAGAD 244 (487)
T ss_dssp CSSCEEETT---THHHHHHHHHHHHHHHH------------------HHTCCGGGCCEEEECCSHHHHHHHHHHHHTTCC
T ss_pred ccCCccccc---cchHHHHHHHHHHHHHH------------------HhCCChhhcEEEEECCCHHHHHHHHHHHHcCCC
Confidence 379999985 34456677788887777 24678999999999999999999999999998
Q ss_pred --EEEEECCCC----Ch-h------------HHHHcCC-cccCHHHHhccCCEEEEecCCCccccccccHhHhccCCCce
Q 007512 222 --HVIAHDPYA----PA-D------------RARAIGV-DLVSFDEAIATADFISLHMPLTPATSKVLNDETFGKMKKGV 281 (600)
Q Consensus 222 --~V~~~d~~~----~~-~------------~a~~~g~-~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~ga 281 (600)
+++.+|..- .. . .+....- ...+|.|+++.+|+++=.- .. ..+.++++.+..|.+.+
T Consensus 245 ~~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~adVlIG~S-~~--~pg~ft~e~V~~Ma~~P 321 (487)
T 3nv9_A 245 PKKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNPSKFGSIAEACVGADVLISLS-TP--GPGVVKAEWIKSMGEKP 321 (487)
T ss_dssp GGGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCTTCCCSHHHHHTTCSEEEECC-CS--SCCCCCHHHHHTSCSSC
T ss_pred cccEEEEeccccccCCcchhhhhcccHHHHHHHHhcccccCCCHHHHHhcCCEEEEec-cc--CCCCCCHHHHHhhcCCC
Confidence 899998752 11 1 1111111 2347999999999776533 11 14789999999999999
Q ss_pred EEEEccCCcc
Q 007512 282 RIINVARGGV 291 (600)
Q Consensus 282 ilvNvarg~i 291 (600)
+|.-.+.-..
T Consensus 322 IIFaLSNPtp 331 (487)
T 3nv9_A 322 IVFCCANPVP 331 (487)
T ss_dssp EEEECCSSSC
T ss_pred EEEECCCCCc
Confidence 9999986443
No 440
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=93.13 E-value=0.089 Score=54.65 Aligned_cols=45 Identities=18% Similarity=0.158 Sum_probs=37.8
Q ss_pred CCEEEEEecChhHHHH-HHHh-hcCCCE-EEEECCCCC----hhHHHHcCCc
Q 007512 197 GKTLAVLGFGKVGSEV-ARRA-KGLGMH-VIAHDPYAP----ADRARAIGVD 241 (600)
Q Consensus 197 gktiGIIGlG~IG~~v-A~~l-~~~g~~-V~~~d~~~~----~~~a~~~g~~ 241 (600)
+++|.|+|.|.+|... ++.+ +.+|.+ |++.++... .+.++++|+.
T Consensus 173 ~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~ 224 (357)
T 2b5w_A 173 PSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDAT 224 (357)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCE
T ss_pred CCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCc
Confidence 4899999999999999 9999 999997 999988764 4566677754
No 441
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.13 E-value=0.049 Score=56.28 Aligned_cols=35 Identities=26% Similarity=0.481 Sum_probs=32.5
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCC
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYA 230 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~ 230 (600)
.|++|.|+|.|.+|...++.++.+|. +|++.++..
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~ 199 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNP 199 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH
Confidence 68999999999999999999999999 999999764
No 442
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.11 E-value=0.062 Score=51.35 Aligned_cols=64 Identities=20% Similarity=0.159 Sum_probs=46.8
Q ss_pred CEEEEEe-cChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCc-----c---cCHHHHhccCCEEEEecCC
Q 007512 198 KTLAVLG-FGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVD-----L---VSFDEAIATADFISLHMPL 261 (600)
Q Consensus 198 ktiGIIG-lG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~-----~---~~l~ell~~aDvV~l~~Pl 261 (600)
++|.|.| .|.||+.+++.|...|.+|++.++..........++. . .+++++++.+|+|+.+...
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 77 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNP 77 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcC
Confidence 6899999 6999999999999999999999987532111111221 1 1356788999999887753
No 443
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=93.10 E-value=0.54 Score=49.95 Aligned_cols=97 Identities=26% Similarity=0.278 Sum_probs=64.6
Q ss_pred ceeecCCCCChHHHHHHHHHHHHHHHhchHHHHHHHHcCccccccccceeccCCEEEEEec-----C---hhHHHHHHHh
Q 007512 145 CLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGF-----G---KVGSEVARRA 216 (600)
Q Consensus 145 I~V~n~p~~~~~~vAE~~l~lll~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktiGIIGl-----G---~IG~~vA~~l 216 (600)
++|+|+-+...-++ .+++=++.+.+++ |.+ ..|.|++|+|+|- | ++..+.+..+
T Consensus 157 ~PVINal~d~~HPt--QaLaDl~TI~E~~---------G~~-------~~l~Glkva~vgd~~~~~G~~nnVa~Sli~~~ 218 (399)
T 3q98_A 157 PALVNLQCDIDHPT--QSMADLAWLREHF---------GSL-------ENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLM 218 (399)
T ss_dssp CEEEEEECSSCCHH--HHHHHHHHHHHHH---------SSS-------GGGTTCEEEEECCCCSSCCCCTHHHHHHHHHH
T ss_pred CcEEeCCCCCcCcH--HHHHHHHHHHHHh---------CCc-------cccCCCEEEEEEecccccCcchHHHHHHHHHH
Confidence 46999866554443 3333344443321 211 1478999999973 4 6889999999
Q ss_pred hcCCCEEEEECCCC---ChhH-------HHHcCCc---ccCHHHHhccCCEEEEec
Q 007512 217 KGLGMHVIAHDPYA---PADR-------ARAIGVD---LVSFDEAIATADFISLHM 259 (600)
Q Consensus 217 ~~~g~~V~~~d~~~---~~~~-------a~~~g~~---~~~l~ell~~aDvV~l~~ 259 (600)
..+|++|....|.. .++. +.+.|.. ..++++.++.||+|..-+
T Consensus 219 ~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~d~~eav~~aDvVytd~ 274 (399)
T 3q98_A 219 TRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDADIVYPKS 274 (399)
T ss_dssp GGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECC
T ss_pred HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhCCCCEEEecC
Confidence 99999999988753 2221 2345653 248999999999998743
No 444
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=92.99 E-value=0.08 Score=54.71 Aligned_cols=66 Identities=20% Similarity=0.190 Sum_probs=47.4
Q ss_pred CCEEEEEe-cChhHHHHHHHhhcCC--CEEEEECCCCChhHHHHc---CC----cc----cCHHHHhccCCEEEEecCCC
Q 007512 197 GKTLAVLG-FGKVGSEVARRAKGLG--MHVIAHDPYAPADRARAI---GV----DL----VSFDEAIATADFISLHMPLT 262 (600)
Q Consensus 197 gktiGIIG-lG~IG~~vA~~l~~~g--~~V~~~d~~~~~~~a~~~---g~----~~----~~l~ell~~aDvV~l~~Pl~ 262 (600)
.++|+|+| .|.+|..++..|...| .+|..+|.......+.++ .. .. .++.+.++.||+|+++.+..
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~~ 87 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVP 87 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCcC
Confidence 35899999 8999999999998767 789999965432122111 11 11 14678899999999998743
No 445
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=92.98 E-value=0.19 Score=47.55 Aligned_cols=50 Identities=10% Similarity=0.210 Sum_probs=38.6
Q ss_pred ccEEEEEecCCCCChhhHHhhhhcCCccccceEeeeec------CCCcEEEEEEeC
Q 007512 526 GSIILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVA------PRKHAVMAIGVD 575 (600)
Q Consensus 526 ~~~Liv~~~D~pG~Ia~V~~iL~~~~INIa~m~v~R~~------~g~~al~~i~~D 575 (600)
.+.|.+..+|+||+++.|+++|+++++||.+++..-.. ..+.-.|.++++
T Consensus 93 ~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~ 148 (192)
T 1u8s_A 93 TVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISAR 148 (192)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEE
T ss_pred eEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEe
Confidence 35566778999999999999999999999999887443 234456666665
No 446
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=92.91 E-value=0.1 Score=54.91 Aligned_cols=92 Identities=24% Similarity=0.245 Sum_probs=59.1
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCC-ChhHHHHcCCcccC------HHHHh------ccCCEEEEecCC
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYA-PADRARAIGVDLVS------FDEAI------ATADFISLHMPL 261 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~-~~~~a~~~g~~~~~------l~ell------~~aDvV~l~~Pl 261 (600)
.|++|.|+|.|.+|...++.++.+|. +|++.|+.. ..+.++++|+..++ +.+.+ ...|+|+-++..
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~ 264 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGF 264 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECCCT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCCEEEECCCC
Confidence 47899999999999999999999998 799998765 44667777764221 22211 136777777653
Q ss_pred Ccccc-----c-----cccHhHhccCCCceEEEEcc
Q 007512 262 TPATS-----K-----VLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 262 ~~~t~-----~-----li~~~~l~~mk~gailvNva 287 (600)
..... + -.-...+..++++..++.++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 265 EARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp TCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred cccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 21000 0 01133455566666666665
No 447
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=92.86 E-value=0.2 Score=51.50 Aligned_cols=96 Identities=18% Similarity=0.173 Sum_probs=60.5
Q ss_pred CEEEEEe-cChhHHHHHHHhhc---CCCEEEEECCCCCh-hHHHHc---CC--cc-----cCHHHHhccCCEEEEecCCC
Q 007512 198 KTLAVLG-FGKVGSEVARRAKG---LGMHVIAHDPYAPA-DRARAI---GV--DL-----VSFDEAIATADFISLHMPLT 262 (600)
Q Consensus 198 ktiGIIG-lG~IG~~vA~~l~~---~g~~V~~~d~~~~~-~~a~~~---g~--~~-----~~l~ell~~aDvV~l~~Pl~ 262 (600)
++|+||| .|.+|.++|..|.. +.-++..+|..... ..+.++ .. .. .+..+.+++||+|+++.+..
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ag~~ 80 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVA 80 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECCSCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeCCCC
Confidence 4899999 99999999999863 55689999986521 112111 11 11 13567899999999998632
Q ss_pred cccccc-----c--cHh-------HhccCCCceEEEEccCCccccHHH
Q 007512 263 PATSKV-----L--NDE-------TFGKMKKGVRIINVARGGVIDEEA 296 (600)
Q Consensus 263 ~~t~~l-----i--~~~-------~l~~mk~gailvNvarg~ivde~a 296 (600)
...++ + |.. .+....|++++++++ ..+|.-.
T Consensus 81 -rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt--NPvd~~t 125 (312)
T 3hhp_A 81 -RKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT--NPVNTTV 125 (312)
T ss_dssp -CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS--SCHHHHH
T ss_pred -CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec--CcchhHH
Confidence 22222 1 111 122345788999995 5556443
No 448
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=92.79 E-value=0.13 Score=53.16 Aligned_cols=105 Identities=15% Similarity=0.250 Sum_probs=62.0
Q ss_pred CEEEEEecChhHHHHHHHhhc-------CCCEEEE-ECCCCC-------hh----HHHHcC-Cc--ccCHHHHhc--cCC
Q 007512 198 KTLAVLGFGKVGSEVARRAKG-------LGMHVIA-HDPYAP-------AD----RARAIG-VD--LVSFDEAIA--TAD 253 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~-------~g~~V~~-~d~~~~-------~~----~a~~~g-~~--~~~l~ell~--~aD 253 (600)
.+|||+|+|.||+.+++.+.. .+++|.+ +|++.. .. ...+.| +. ..+.++++. +.|
T Consensus 5 irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~d~~e~l~~~~iD 84 (325)
T 3ing_A 5 IRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAFSGPEDLMGEAAD 84 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBCCSGGGGTTSCCS
T ss_pred EEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccCCHHHHhcCCCCC
Confidence 479999999999999999975 3567766 465431 11 122234 22 126677774 589
Q ss_pred EEEEecCCCccccccccHhHhccCCCceEEEEccCCccc-cHHHHHHhHhc
Q 007512 254 FISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVI-DEEALVRALDS 303 (600)
Q Consensus 254 vV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~iv-de~aL~~aL~~ 303 (600)
+|+.|+|... ..+..-+.....|+.|.-+|-+..+.+. ..+.|.++.++
T Consensus 85 vVVe~T~~~~-~~~pa~~~~~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~ 134 (325)
T 3ing_A 85 LLVDCTPASR-DGVREYSLYRMAFESGMNVVTANKSGLANKWHDIMDSANQ 134 (325)
T ss_dssp EEEECCCCCS-SSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCcc-ccchHHHHHHHHHHCCCeEEEcCchhHHHHHHHHHHHHHH
Confidence 9999999441 1000012234446777777766555543 34455555444
No 449
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=92.79 E-value=0.063 Score=55.27 Aligned_cols=45 Identities=29% Similarity=0.343 Sum_probs=36.1
Q ss_pred cCCEEEEEec-ChhHHHHHHHhhcCCCEEEEECCCC-ChhHHH-HcCC
Q 007512 196 VGKTLAVLGF-GKVGSEVARRAKGLGMHVIAHDPYA-PADRAR-AIGV 240 (600)
Q Consensus 196 ~gktiGIIGl-G~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~-~~g~ 240 (600)
.|+++.|+|. |.||..+++.++..|++|++.+++. ..+.++ ++|.
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~ 202 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGF 202 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC
Confidence 4889999997 9999999999999999999998764 233344 3554
No 450
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=92.78 E-value=0.14 Score=52.36 Aligned_cols=98 Identities=16% Similarity=0.076 Sum_probs=58.3
Q ss_pred CEEEEEecChhHHHHHHHhhcCC--CEEEEECCCCChh--HHHHc-------CC--c--ccCHHHHhccCCEEEEecC--
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLG--MHVIAHDPYAPAD--RARAI-------GV--D--LVSFDEAIATADFISLHMP-- 260 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g--~~V~~~d~~~~~~--~a~~~-------g~--~--~~~l~ell~~aDvV~l~~P-- 260 (600)
+||+|||.|.||+.+|-.|+..+ -++..||...... .+.++ +. . ..+--+.++.||+|++..-
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitAG~p 80 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLA 80 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEecCCC
Confidence 48999999999999999887443 4899999864221 11111 11 1 1122357899999999874
Q ss_pred CCc-cccc-cc--cHh-------HhccCCCceEEEEccCCccccHHHH
Q 007512 261 LTP-ATSK-VL--NDE-------TFGKMKKGVRIINVARGGVIDEEAL 297 (600)
Q Consensus 261 l~~-~t~~-li--~~~-------~l~~mk~gailvNvarg~ivde~aL 297 (600)
..| .||. ++ |.+ .+.+-.|+++++.++ ..+|.-..
T Consensus 81 rkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs--NPvd~~t~ 126 (294)
T 2x0j_A 81 RKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDVMTY 126 (294)
T ss_dssp CCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHHHHH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec--CcchhhHH
Confidence 222 1221 11 111 223345778888874 44564433
No 451
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=92.73 E-value=0.16 Score=55.88 Aligned_cols=109 Identities=15% Similarity=0.169 Sum_probs=67.0
Q ss_pred ccCCEEEEEecChhHHH-HHHHhhcCCCEEEEECCCCCh---hHHHHcCCccc---CHHHHhccCCEEEEe--cCCC-cc
Q 007512 195 LVGKTLAVLGFGKVGSE-VARRAKGLGMHVIAHDPYAPA---DRARAIGVDLV---SFDEAIATADFISLH--MPLT-PA 264 (600)
Q Consensus 195 l~gktiGIIGlG~IG~~-vA~~l~~~g~~V~~~d~~~~~---~~a~~~g~~~~---~l~ell~~aDvV~l~--~Pl~-~~ 264 (600)
..+++|-|||.|.+|.+ +|+.|+..|++|.++|..... +..++.|+... +.+.+..++|+|+.. +|.+ |+
T Consensus 17 ~~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~~~~~~~d~vV~Spgi~~~~p~ 96 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVTIEEGYLIAHLQPAPDLVVVGNAMKRGMDV 96 (524)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCEEEESCCGGGGCSCCSEEEECTTCCTTSHH
T ss_pred ecCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEECCCCHHHcCCCCCEEEECCCcCCCCHH
Confidence 45789999999999997 788899999999999986522 33456687643 344555789999885 3322 22
Q ss_pred c-------cccccHhH-hcc--CCCce-EEEEccCCccccHHHHHHhHhc
Q 007512 265 T-------SKVLNDET-FGK--MKKGV-RIINVARGGVIDEEALVRALDS 303 (600)
Q Consensus 265 t-------~~li~~~~-l~~--mk~ga-ilvNvarg~ivde~aL~~aL~~ 303 (600)
. ..++.+.+ +.. +++.. +-|-=+.|+.-...-+...|+.
T Consensus 97 l~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~ 146 (524)
T 3hn7_A 97 IEYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHY 146 (524)
T ss_dssp HHHHHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCcEEEHHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHH
Confidence 1 12333333 332 33323 3333346887555555555554
No 452
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=92.69 E-value=0.063 Score=57.19 Aligned_cols=85 Identities=16% Similarity=0.193 Sum_probs=54.8
Q ss_pred CEEEEEecChhHHHHHHHhhcCC---CEEEEECCCCCh-h-HHHHc------CCc--------ccCHHHHhcc--CCEEE
Q 007512 198 KTLAVLGFGKVGSEVARRAKGLG---MHVIAHDPYAPA-D-RARAI------GVD--------LVSFDEAIAT--ADFIS 256 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~g---~~V~~~d~~~~~-~-~a~~~------g~~--------~~~l~ell~~--aDvV~ 256 (600)
++|+|+|.|.||+.+++.|...| .+|.++|++... + .+.+. .+. ..++++++++ +|+|+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi 81 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL 81 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence 58999999999999999999877 499999887522 1 12221 121 1236677877 89999
Q ss_pred EecCCCccccccccHhHhccCCCceEEEEcc
Q 007512 257 LHMPLTPATSKVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 257 l~~Pl~~~t~~li~~~~l~~mk~gailvNva 287 (600)
.++|... ...++ -..++.|.-++|++
T Consensus 82 n~ag~~~-~~~v~----~a~l~~g~~vvD~a 107 (405)
T 4ina_A 82 NIALPYQ-DLTIM----EACLRTGVPYLDTA 107 (405)
T ss_dssp ECSCGGG-HHHHH----HHHHHHTCCEEESS
T ss_pred ECCCccc-ChHHH----HHHHHhCCCEEEec
Confidence 9988332 11111 12234566677764
No 453
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=92.65 E-value=0.11 Score=53.60 Aligned_cols=44 Identities=30% Similarity=0.348 Sum_probs=35.6
Q ss_pred cCCEEEEEec-ChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcC
Q 007512 196 VGKTLAVLGF-GKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIG 239 (600)
Q Consensus 196 ~gktiGIIGl-G~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g 239 (600)
.|+++.|+|. |.||..+++.++..|.+|++.+++. ..+.+++.|
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g 211 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALG 211 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcC
Confidence 4889999999 9999999999999999999998764 223344444
No 454
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=92.56 E-value=0.086 Score=54.68 Aligned_cols=105 Identities=18% Similarity=0.231 Sum_probs=61.3
Q ss_pred CEEEEEecChhHHHHHHHhhcC--------CCEEEE-ECCCCCh-hH-------HH---HcCCc--cc---CHHHHh-cc
Q 007512 198 KTLAVLGFGKVGSEVARRAKGL--------GMHVIA-HDPYAPA-DR-------AR---AIGVD--LV---SFDEAI-AT 251 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~~--------g~~V~~-~d~~~~~-~~-------a~---~~g~~--~~---~l~ell-~~ 251 (600)
.+|||||+|.||+.+++.++.. +++|.+ +|++... .. +. ..++. .. ++++++ .+
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~~~ 86 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEALARD 86 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHHHSS
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHhCCC
Confidence 4799999999999999998643 367755 5765421 10 11 11321 12 788887 46
Q ss_pred CCEEEEecCCCccccccccHhHhccCCCceEEEEccCCccc-cHHHHHHhHhc
Q 007512 252 ADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVARGGVI-DEEALVRALDS 303 (600)
Q Consensus 252 aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvarg~iv-de~aL~~aL~~ 303 (600)
.|+|+.|+|.. .|...--+-....|+.|.-++-+....+. ..++|.++.++
T Consensus 87 iDvVv~~t~~~-~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~ 138 (331)
T 3c8m_A 87 FDIVVDATPAS-ADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARS 138 (331)
T ss_dssp CSEEEECSCCC-SSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCC-CccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHH
Confidence 89999999964 11111112233446666666655444442 23455554444
No 455
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.56 E-value=0.087 Score=56.58 Aligned_cols=66 Identities=21% Similarity=0.226 Sum_probs=49.6
Q ss_pred eccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCCh---hHHHHcCCccc---CHHHHhccCCEEEEecC
Q 007512 194 SLVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPA---DRARAIGVDLV---SFDEAIATADFISLHMP 260 (600)
Q Consensus 194 ~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~---~~a~~~g~~~~---~l~ell~~aDvV~l~~P 260 (600)
++.+|+|.|||+|..|.+.|+.|+..|++|.++|.+... .... .|++.. ...+.+..+|.|++.-.
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~~~~~~~~~~d~vV~s~g 73 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTGSLNDEWLMAADLIVASPG 73 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEESSCCHHHHHTCSEEEECTT
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEECCCcHHHhccCCEEEeCCC
Confidence 357899999999999999999999999999999976522 2223 566542 12455668999988743
No 456
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=92.55 E-value=0.22 Score=53.75 Aligned_cols=34 Identities=38% Similarity=0.629 Sum_probs=31.8
Q ss_pred ceeccCCEEEEEecChhHHHHHHHhhcCCCEEEE
Q 007512 192 GVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVIA 225 (600)
Q Consensus 192 g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~ 225 (600)
|.++.|+++.|.|+|.+|+.+|+.|...|.+|++
T Consensus 225 G~~l~g~~v~VqG~GnVG~~~a~~L~~~GakvVa 258 (449)
T 1bgv_A 225 NDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVT 258 (449)
T ss_dssp TCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEE
T ss_pred cCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 5678999999999999999999999999999986
No 457
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.53 E-value=0.083 Score=54.00 Aligned_cols=45 Identities=27% Similarity=0.259 Sum_probs=35.9
Q ss_pred cCCEEEEEe-cChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCC
Q 007512 196 VGKTLAVLG-FGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGV 240 (600)
Q Consensus 196 ~gktiGIIG-lG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~ 240 (600)
.|+++.|+| .|.||..+++.++..|.+|++.++.. ..+.+++.|.
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~ 186 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGA 186 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC
Confidence 488999999 79999999999999999999998764 2333444443
No 458
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.53 E-value=0.16 Score=54.53 Aligned_cols=85 Identities=18% Similarity=0.191 Sum_probs=59.5
Q ss_pred cCCEEEEEecC----------hhHHHHHHHhhcCCCEEEEECCCCChhHH----HHcC--------Ccc-cCHHHHhccC
Q 007512 196 VGKTLAVLGFG----------KVGSEVARRAKGLGMHVIAHDPYAPADRA----RAIG--------VDL-VSFDEAIATA 252 (600)
Q Consensus 196 ~gktiGIIGlG----------~IG~~vA~~l~~~g~~V~~~d~~~~~~~a----~~~g--------~~~-~~l~ell~~a 252 (600)
.|++|+|+|+. .-...+++.|...|.+|.+|||+.+.... ...+ ..+ .++.+.++.|
T Consensus 312 ~~~~v~vlGlafK~~~~d~r~s~~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (436)
T 1mv8_A 312 DTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGYELRIFDRNVEYARVHGANKEYIESKIPHVSSLLVSDLDEVVASS 391 (436)
T ss_dssp SCCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECHHHHHHTTSSSCHHHHHHTSHHHHTTBCSCHHHHHHHC
T ss_pred cCCEEEEEccccCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChhhccchhhhhcccccccccccccCCHHHHHhCC
Confidence 79999999997 46788999999999999999998421110 1111 122 3678899999
Q ss_pred CEEEEecCCCccccccccHhHhccCCCceEEEEc
Q 007512 253 DFISLHMPLTPATSKVLNDETFGKMKKGVRIINV 286 (600)
Q Consensus 253 DvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNv 286 (600)
|+|++++.- ++-+.+ + ...|+ +.+|+|+
T Consensus 392 d~~vi~~~~-~~~~~~-~---~~~~~-~~~i~D~ 419 (436)
T 1mv8_A 392 DVLVLGNGD-ELFVDL-V---NKTPS-GKKLVDL 419 (436)
T ss_dssp SEEEECSCC-GGGHHH-H---HSCCT-TCEEEES
T ss_pred cEEEEeCCc-HHHHhh-h---HHhcC-CCEEEEC
Confidence 999999884 322211 2 34455 5788887
No 459
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=92.53 E-value=0.13 Score=53.57 Aligned_cols=30 Identities=30% Similarity=0.541 Sum_probs=25.6
Q ss_pred EEEEEecChhHHHHHHHhhcC-CCEEEEECC
Q 007512 199 TLAVLGFGKVGSEVARRAKGL-GMHVIAHDP 228 (600)
Q Consensus 199 tiGIIGlG~IG~~vA~~l~~~-g~~V~~~d~ 228 (600)
+|||+|+|+||+.+.|.+... .++|.+...
T Consensus 3 kVgI~G~G~iGr~l~R~l~~~~~veivain~ 33 (334)
T 3cmc_O 3 KVGINGFGRIGRNVFRAALKNPDIEVVAVND 33 (334)
T ss_dssp EEEEESCSHHHHHHHHHHTTCTTEEEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHhCCCCeEEEEEeC
Confidence 799999999999999998866 688877643
No 460
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=92.48 E-value=0.13 Score=55.50 Aligned_cols=62 Identities=18% Similarity=0.210 Sum_probs=0.0
Q ss_pred EEEEEecChhHHHHHHHhhc----------CCCEEEE-ECCCCChhHHHHcCCccc-CHHHHhc--cCCEEEEecC
Q 007512 199 TLAVLGFGKVGSEVARRAKG----------LGMHVIA-HDPYAPADRARAIGVDLV-SFDEAIA--TADFISLHMP 260 (600)
Q Consensus 199 tiGIIGlG~IG~~vA~~l~~----------~g~~V~~-~d~~~~~~~a~~~g~~~~-~l~ell~--~aDvV~l~~P 260 (600)
+|||||+|.||+.+++.++. .+.+|.+ +|++.........+..+. ++++++. +.|+|+.|+|
T Consensus 12 rIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~~~~~~~d~~ell~d~diDvVve~tp 87 (444)
T 3mtj_A 12 HVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAGGLPLTTNPFDVVDDPEIDIVVELIG 87 (444)
T ss_dssp EEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHTTCCEESCTHHHHTCTTCCEEEECCC
T ss_pred cEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcccCcccCCHHHHhcCCCCCEEEEcCC
No 461
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=92.45 E-value=0.14 Score=49.40 Aligned_cols=68 Identities=19% Similarity=0.215 Sum_probs=48.4
Q ss_pred ccCCEEEEEe-cChhHHHHHHHhhcCCC--EEEEECCCCCh-hHHHHcCCc--------ccCHHHHhccCCEEEEecCCC
Q 007512 195 LVGKTLAVLG-FGKVGSEVARRAKGLGM--HVIAHDPYAPA-DRARAIGVD--------LVSFDEAIATADFISLHMPLT 262 (600)
Q Consensus 195 l~gktiGIIG-lG~IG~~vA~~l~~~g~--~V~~~d~~~~~-~~a~~~g~~--------~~~l~ell~~aDvV~l~~Pl~ 262 (600)
+.+|++.|.| .|.||+.+++.|...|. +|++.++.... ......++. ..+++++++.+|+|+.+....
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~ 95 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 95 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence 5688999999 69999999999998898 99999876521 111111221 123556778889998887644
No 462
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=92.43 E-value=0.21 Score=52.45 Aligned_cols=134 Identities=16% Similarity=0.210 Sum_probs=87.5
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCcccCHHHHhccCCEEEEecCCCccccccccHhHhcc
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLVSFDEAIATADFISLHMPLTPATSKVLNDETFGK 276 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~~l~~ 276 (600)
--++-|+|.|.+|+.+++.++.+|++|.++|++... + + .+-++.+|-++...| .+.+..
T Consensus 199 ~~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~~--~--------~-~~~fp~a~~v~~~~p----------~~~~~~ 257 (362)
T 3on5_A 199 KERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPNQ--C--------E-KHFFPDADEIIVDFP----------ADFLRK 257 (362)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGGG--G--------C-GGGCTTCSEEEESCH----------HHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEECCCccc--c--------c-cccCCCceEEecCCH----------HHHHhh
Confidence 347999999999999999999999999999987521 1 0 122456776655444 222333
Q ss_pred --CCCceEEEEccCCccccHHHHHHhHhcC--CceEEEEec-----cCCCCCCCCCccccCCcEEEcC---CCCCCcHHH
Q 007512 277 --MKKGVRIINVARGGVIDEEALVRALDSG--RVAQAALDV-----FTEEPPPADSKLVQHERVTVTP---HLGASTMEA 344 (600)
Q Consensus 277 --mk~gailvNvarg~ivde~aL~~aL~~g--~i~ga~lDv-----~~~EP~~~~~~L~~~~nvilTP---H~~~~t~ea 344 (600)
+.++..++=+.++.-.|...|..+|+.. +|+-.|+-. .... ....+ +-+| .+|+.|.
T Consensus 258 ~~~~~~t~vvv~TH~h~~D~~~L~~aL~~~~~YiG~iGSr~R~~rl~~~g--------~~~~r-i~~PIGL~Iga~tP-- 326 (362)
T 3on5_A 258 FLIRPDDFVLIMTHHFQKDQEILHFLLEKELRYIGILGSKERTRRLLQNR--------KPPDH-LYSPVGLSIDAQGP-- 326 (362)
T ss_dssp SCCCTTCEEEECCSCHHHHHHHHHHHSSSCCSEEEESSCHHHHHHHHTSC--------CCCTT-EESSCSCCSCCCSH--
T ss_pred cCCCCCeEEEEEeCCchhhHHHHHHHhcCCCCEEEEeCCHHHHHHHHhcC--------CcHhh-eECCCCCCCCCCCH--
Confidence 5677888888888888888888888774 332222211 1111 00122 4555 3556776
Q ss_pred HHHHHHHHHHHHHHHHcCC
Q 007512 345 QEGVAIEIAEAVVGALKGE 363 (600)
Q Consensus 345 ~~~~~~~~~~~l~~~l~g~ 363 (600)
+.++..++-+|....++.
T Consensus 327 -~EIAvSI~AEiia~~~~~ 344 (362)
T 3on5_A 327 -EEIAISIVAQLIQLIRSR 344 (362)
T ss_dssp -HHHHHHHHHHHHHHHHHS
T ss_pred -HHHHHHHHHHHHHHHhCC
Confidence 456788888888888776
No 463
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=92.41 E-value=0.38 Score=47.25 Aligned_cols=38 Identities=26% Similarity=0.385 Sum_probs=33.2
Q ss_pred eeccCCEEEEEec-Ch--hHHHHHHHhhcCCCEEEEECCCC
Q 007512 193 VSLVGKTLAVLGF-GK--VGSEVARRAKGLGMHVIAHDPYA 230 (600)
Q Consensus 193 ~~l~gktiGIIGl-G~--IG~~vA~~l~~~g~~V~~~d~~~ 230 (600)
.++.||++.|.|. |. ||+.+|+.|...|++|+..++..
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 43 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE 43 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch
Confidence 3678999999997 45 99999999999999999987764
No 464
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=92.40 E-value=0.083 Score=55.78 Aligned_cols=92 Identities=20% Similarity=0.180 Sum_probs=60.4
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCC-EEEEECCCC-ChhHHHHcCCccc-----CH-HHHhc------cCCEEEEecCC
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGM-HVIAHDPYA-PADRARAIGVDLV-----SF-DEAIA------TADFISLHMPL 261 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~-~V~~~d~~~-~~~~a~~~g~~~~-----~l-~ell~------~aDvV~l~~Pl 261 (600)
.|++|.|+|.|.||...++.++.+|. +|++.|++. ..+.++++|+..+ ++ .+.+. ..|+|+-++..
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~ 264 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVDCGVDAVGF 264 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCCEEEECCCC
Confidence 48899999999999999999999998 999999765 3456667776422 11 22111 46888777763
Q ss_pred Ccc----------ccccccHhHhccCCCceEEEEccC
Q 007512 262 TPA----------TSKVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 262 ~~~----------t~~li~~~~l~~mk~gailvNvar 288 (600)
... .... -...+..++++..++.++-
T Consensus 265 ~~~~~~~~~~~~~~~~~-~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 265 EAHGLGDEANTETPNGA-LNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp TCBCSGGGTTSBCTTHH-HHHHHHHEEEEEEEECCSC
T ss_pred ccccccccccccccHHH-HHHHHHHHhcCCEEEEecc
Confidence 210 0001 1334556777777777653
No 465
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=92.35 E-value=0.27 Score=51.35 Aligned_cols=88 Identities=14% Similarity=0.100 Sum_probs=57.2
Q ss_pred ccCCEEEEEec-ChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCccc------CHHHHh-----ccCCEEEEecCCC
Q 007512 195 LVGKTLAVLGF-GKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLV------SFDEAI-----ATADFISLHMPLT 262 (600)
Q Consensus 195 l~gktiGIIGl-G~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~------~l~ell-----~~aDvV~l~~Pl~ 262 (600)
-.|++|.|+|. |.+|...++.++..|.+|++.......+.++++|...+ ++.+.+ ...|+++-|+...
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~~ 242 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNV 242 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCSH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCch
Confidence 46899999999 89999999999999999988752224566777876421 222222 1267777766521
Q ss_pred ccccccccHhHhccC-CCceEEEEcc
Q 007512 263 PATSKVLNDETFGKM-KKGVRIINVA 287 (600)
Q Consensus 263 ~~t~~li~~~~l~~m-k~gailvNva 287 (600)
. + -...+..| +++..++.++
T Consensus 243 ~-~----~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 243 E-S----TTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp H-H----HHHHHHHSCTTCEEEEESS
T ss_pred H-H----HHHHHHHhhcCCCEEEEEe
Confidence 1 1 12334455 4666777665
No 466
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=92.32 E-value=0.18 Score=48.00 Aligned_cols=47 Identities=15% Similarity=0.113 Sum_probs=37.1
Q ss_pred cEEEEEecCCCCChhhHHhhhhcCCccccceEeeeecCCCcEEEEEEeC
Q 007512 527 SIILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVAPRKHAVMAIGVD 575 (600)
Q Consensus 527 ~~Liv~~~D~pG~Ia~V~~iL~~~~INIa~m~v~R~~~g~~al~~i~~D 575 (600)
..|.+..+|+||+++.|++.|+++|.||...+... .. +.-.|++.++
T Consensus 6 ~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~-~~-~~f~m~~~v~ 52 (195)
T 2nyi_A 6 FVVSVAGSDRVGIVHDFSWALKNISANVESSRMAC-LG-GDFAMIVLVS 52 (195)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE-ET-TEEEEEEEEE
T ss_pred EEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEE-EC-CeEEEEEEEE
Confidence 45677789999999999999999999999999885 33 3433355554
No 467
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=92.24 E-value=0.081 Score=55.55 Aligned_cols=30 Identities=23% Similarity=0.426 Sum_probs=24.2
Q ss_pred EEEEEecChhHHHHHHHhhcC----CCEEEE-ECC
Q 007512 199 TLAVLGFGKVGSEVARRAKGL----GMHVIA-HDP 228 (600)
Q Consensus 199 tiGIIGlG~IG~~vA~~l~~~----g~~V~~-~d~ 228 (600)
+|||||+|.||+.+++.++.. +++|.+ +|.
T Consensus 6 ~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 6 NVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp EEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 799999999999999999864 356655 464
No 468
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=92.15 E-value=0.19 Score=48.32 Aligned_cols=67 Identities=18% Similarity=0.090 Sum_probs=47.8
Q ss_pred cCCEEEEEe-cChhHHHHHHHhhcC--CCEEEEECCCCChhHHHHcCCcc--------cCHHHHhccCCEEEEecCCC
Q 007512 196 VGKTLAVLG-FGKVGSEVARRAKGL--GMHVIAHDPYAPADRARAIGVDL--------VSFDEAIATADFISLHMPLT 262 (600)
Q Consensus 196 ~gktiGIIG-lG~IG~~vA~~l~~~--g~~V~~~d~~~~~~~a~~~g~~~--------~~l~ell~~aDvV~l~~Pl~ 262 (600)
.+++|.|.| .|.||+.+++.|... |++|++.++..........++.. .+++++++.+|+|+.+....
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~ 80 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSAV 80 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEecccc
Confidence 578999998 699999999999987 89999998764221111112221 13567788899998887643
No 469
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=92.12 E-value=0.13 Score=53.28 Aligned_cols=95 Identities=22% Similarity=0.241 Sum_probs=59.1
Q ss_pred cCCEEEEEe-cChhHHHHHHHhhcCCCEEEEECCCCChh---HHHH-cCC-----c-cc---CHHHHhccCCEEEEecCC
Q 007512 196 VGKTLAVLG-FGKVGSEVARRAKGLGMHVIAHDPYAPAD---RARA-IGV-----D-LV---SFDEAIATADFISLHMPL 261 (600)
Q Consensus 196 ~gktiGIIG-lG~IG~~vA~~l~~~g~~V~~~d~~~~~~---~a~~-~g~-----~-~~---~l~ell~~aDvV~l~~Pl 261 (600)
.+++|.|.| .|.||+.+++.|...|++|++.++..+.. .... .++ + .. ++.++++.+|+|+.++..
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~ 83 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 83 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence 367899998 59999999999998899999988765322 1111 132 2 21 256778999999977653
Q ss_pred CccccccccHhHhccCCC-c--eEEEEccCCc
Q 007512 262 TPATSKVLNDETFGKMKK-G--VRIINVARGG 290 (600)
Q Consensus 262 ~~~t~~li~~~~l~~mk~-g--ailvNvarg~ 290 (600)
............+..+++ | ..||+++...
T Consensus 84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred CCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence 311111222333333332 3 3788887643
No 470
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=92.04 E-value=0.19 Score=51.86 Aligned_cols=85 Identities=19% Similarity=0.205 Sum_probs=56.1
Q ss_pred CCEEEEE-ecChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc------CHHHHh------ccCCEEEEecCCC
Q 007512 197 GKTLAVL-GFGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV------SFDEAI------ATADFISLHMPLT 262 (600)
Q Consensus 197 gktiGII-GlG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~------~l~ell------~~aDvV~l~~Pl~ 262 (600)
++++.|. |.|.||...++.++..|.+|++.+++. ..+.++++|...+ ++.+.+ ...|+|+-|+..
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~- 243 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTG- 243 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCH-
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCC-
Confidence 3677665 999999999999999999999998765 4566677776421 222211 246777766641
Q ss_pred ccccccccHhHhccCCCceEEEEcc
Q 007512 263 PATSKVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 263 ~~t~~li~~~~l~~mk~gailvNva 287 (600)
+. + ...+..|+++..++.++
T Consensus 244 ~~----~-~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 244 PL----A-SAIFNAMPKRARWIIYG 263 (349)
T ss_dssp HH----H-HHHHHHSCTTCEEEECC
T ss_pred hh----H-HHHHhhhcCCCEEEEEe
Confidence 11 1 34555667777776665
No 471
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.97 E-value=0.16 Score=51.78 Aligned_cols=66 Identities=20% Similarity=0.181 Sum_probs=46.4
Q ss_pred ceeccCCEEEEEec-ChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCcc--------cCHHHHhccCCEEEEecCCC
Q 007512 192 GVSLVGKTLAVLGF-GKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDL--------VSFDEAIATADFISLHMPLT 262 (600)
Q Consensus 192 g~~l~gktiGIIGl-G~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~--------~~l~ell~~aDvV~l~~Pl~ 262 (600)
.....+|+|.|.|. |.||+.+++.|...|++|++.++.... .++.. .++++++..+|+|+.+....
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~ 88 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFM 88 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----CCccEEecCcCCHHHHHHHHhCCCEEEECCccc
Confidence 35788999999997 999999999999999999999876532 22221 13667888999998877644
No 472
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=91.97 E-value=0.19 Score=52.32 Aligned_cols=46 Identities=22% Similarity=0.393 Sum_probs=37.9
Q ss_pred cCCEEEEEe-cChhHHHHHHHhhc-CCCEEEEECCCC-ChhHHHHcCCc
Q 007512 196 VGKTLAVLG-FGKVGSEVARRAKG-LGMHVIAHDPYA-PADRARAIGVD 241 (600)
Q Consensus 196 ~gktiGIIG-lG~IG~~vA~~l~~-~g~~V~~~d~~~-~~~~a~~~g~~ 241 (600)
.|++|.|+| .|.+|...++.++. .|.+|++.++.. ..+.++++|..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad 219 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAH 219 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCC
Confidence 588999999 99999999999997 599999999875 34556666653
No 473
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=91.93 E-value=0.1 Score=49.72 Aligned_cols=65 Identities=14% Similarity=0.118 Sum_probs=46.3
Q ss_pred CEEEEEe-cChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCC-----cc----cCHHHHhccCCEEEEecCCCc
Q 007512 198 KTLAVLG-FGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGV-----DL----VSFDEAIATADFISLHMPLTP 263 (600)
Q Consensus 198 ktiGIIG-lG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~-----~~----~~l~ell~~aDvV~l~~Pl~~ 263 (600)
++|.|.| .|.||+.+++.|...|++|++.++........ .++ .. .++.++++.+|+|+.+.....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~ 75 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGG 75 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTT
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCC
Confidence 3788998 89999999999999999999998775221100 122 11 235567788999988877543
No 474
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=91.93 E-value=0.12 Score=53.14 Aligned_cols=87 Identities=21% Similarity=0.168 Sum_probs=56.4
Q ss_pred cCCEEEEEecChhHHHHHHHhhcC-CCEEEEECCCC-ChhHHHHcCCccc-----CHHH----Hhc--cCCEEEEecCCC
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGL-GMHVIAHDPYA-PADRARAIGVDLV-----SFDE----AIA--TADFISLHMPLT 262 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~-g~~V~~~d~~~-~~~~a~~~g~~~~-----~l~e----ll~--~aDvV~l~~Pl~ 262 (600)
.|.++.|+|.|.+|...++.++.. |.+|++.|... ..+.++++|...+ ++.+ +.. ..|+|+-++...
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~G~~ 250 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGAQ 250 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECCCCH
Confidence 488999999999999999999977 78999998776 4566777776421 1111 111 456666665521
Q ss_pred ccccccccHhHhccCCCceEEEEcc
Q 007512 263 PATSKVLNDETFGKMKKGVRIINVA 287 (600)
Q Consensus 263 ~~t~~li~~~~l~~mk~gailvNva 287 (600)
. .-...+..++++..++.++
T Consensus 251 ~-----~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 251 S-----TIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp H-----HHHHHHHHEEEEEEEEECS
T ss_pred H-----HHHHHHHHHhcCCEEEEEC
Confidence 1 1123444566666666654
No 475
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=91.89 E-value=0.28 Score=53.04 Aligned_cols=113 Identities=19% Similarity=0.189 Sum_probs=68.7
Q ss_pred CCEEEEEecChh-HHHHHHHhhc----C-CCEEEEECCCC--ChhH-----HH----HcCC----cc-cCHHHHhccCCE
Q 007512 197 GKTLAVLGFGKV-GSEVARRAKG----L-GMHVIAHDPYA--PADR-----AR----AIGV----DL-VSFDEAIATADF 254 (600)
Q Consensus 197 gktiGIIGlG~I-G~~vA~~l~~----~-g~~V~~~d~~~--~~~~-----a~----~~g~----~~-~~l~ell~~aDv 254 (600)
.++|+|||.|.. |..++..|.. + +.+|..||... .... +. ..+. .. .++.+.++.||+
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gAD~ 86 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADF 86 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCCCE
Confidence 358999999998 7776555543 4 56899999875 3211 11 1222 12 367889999999
Q ss_pred EEEecCCCcc---cc--------cccc----------------------HhHhccCCCceEEEEccCCccccHHHHHHhH
Q 007512 255 ISLHMPLTPA---TS--------KVLN----------------------DETFGKMKKGVRIINVARGGVIDEEALVRAL 301 (600)
Q Consensus 255 V~l~~Pl~~~---t~--------~li~----------------------~~~l~~mk~gailvNvarg~ivde~aL~~aL 301 (600)
|++++|.... ++ +++. .+.+....|+++++|++---=+-..++.+..
T Consensus 87 VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvdivT~a~~k~~ 166 (450)
T 1s6y_A 87 VTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRYT 166 (450)
T ss_dssp EEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHC
T ss_pred EEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhC
Confidence 9999995321 11 1110 0123335689999999754333355555544
Q ss_pred hcCCceEE
Q 007512 302 DSGRVAQA 309 (600)
Q Consensus 302 ~~g~i~ga 309 (600)
...++.|.
T Consensus 167 p~~rViG~ 174 (450)
T 1s6y_A 167 KQEKVVGL 174 (450)
T ss_dssp CCCCEEEC
T ss_pred CCCCEEEe
Confidence 44467664
No 476
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=91.88 E-value=0.046 Score=55.24 Aligned_cols=33 Identities=21% Similarity=0.293 Sum_probs=27.3
Q ss_pred CEEEEEec-ChhHHHHHHHhh-cCCCEEE-EECCCC
Q 007512 198 KTLAVLGF-GKVGSEVARRAK-GLGMHVI-AHDPYA 230 (600)
Q Consensus 198 ktiGIIGl-G~IG~~vA~~l~-~~g~~V~-~~d~~~ 230 (600)
.+|+|+|+ |+||+.+++.+. .-|+++. ++|+..
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~ 41 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREG 41 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTT
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCc
Confidence 48999998 999999999877 4588887 577654
No 477
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.86 E-value=0.11 Score=51.65 Aligned_cols=62 Identities=19% Similarity=0.282 Sum_probs=45.4
Q ss_pred cCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCcc--------cCHHHHhcc-CCEEEEecC
Q 007512 196 VGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDL--------VSFDEAIAT-ADFISLHMP 260 (600)
Q Consensus 196 ~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~--------~~l~ell~~-aDvV~l~~P 260 (600)
.+++|.|.|.|.||+.+++.|...|.+|++.++..... ..++.. .+++++++. +|+|+.+..
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPM---PAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCC---CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcccc---ccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 36789999999999999999999999999998765321 122221 134456666 999987664
No 478
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=91.76 E-value=0.13 Score=53.32 Aligned_cols=44 Identities=14% Similarity=0.209 Sum_probs=35.4
Q ss_pred cCCEEEEEe-cChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcC
Q 007512 196 VGKTLAVLG-FGKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIG 239 (600)
Q Consensus 196 ~gktiGIIG-lG~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g 239 (600)
.|+++.|+| .|.||..+++.++..|++|++.++.. ..+.+++.|
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g 207 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLG 207 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcC
Confidence 488999999 79999999999999999999998764 223344444
No 479
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=91.72 E-value=0.28 Score=44.05 Aligned_cols=59 Identities=19% Similarity=0.268 Sum_probs=41.9
Q ss_pred cEEEEEecCCCCChhhHHhhhhcCCccccceEeeeecCCCcEEEEEEeCCCCcHHHHHHHhcC
Q 007512 527 SIILCRQVDQPGMIGTVGSILGSENVNVSFMSVGRVAPRKHAVMAIGVDEQPRKETLKKIGDV 589 (600)
Q Consensus 527 ~~Liv~~~D~pG~Ia~V~~iL~~~~INIa~m~v~R~~~g~~al~~i~~D~~~~~~~l~~l~~~ 589 (600)
+.+.+.-+|+||++++|.+.|+++||||-.+...... +.+++++..++ ++.+.+.|++.
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~--~~~~~~~~~~d--~~~a~~~L~~~ 65 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENA--DFGILRGIVSD--PDKAYKALKDN 65 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECS--SCEEEEEEESC--HHHHHHHHHHT
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecC--CCCEEEEEeCC--HHHHHHHHHHc
Confidence 5566778999999999999999999999999886422 22455555443 24455555543
No 480
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=91.71 E-value=0.13 Score=45.66 Aligned_cols=66 Identities=20% Similarity=0.304 Sum_probs=44.4
Q ss_pred CCEEEEEecChhHHHHHHHhhcC-CCEEEEE-CCCCChhHHHHcCCccc---CHHHHhc--cCCEEEEecCCC
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGL-GMHVIAH-DPYAPADRARAIGVDLV---SFDEAIA--TADFISLHMPLT 262 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~-g~~V~~~-d~~~~~~~a~~~g~~~~---~l~ell~--~aDvV~l~~Pl~ 262 (600)
.+++.|||.|..|+.+++.++.. |+++++| |.........-.|+... ++.++++ ..|.|++++|..
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~~~~~~g~~i~g~pV~g~~~l~~~~~~~~id~viia~~~~ 76 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDDDRKKHKTTMQGITIYRPKYLERLIKKHCISTVLLAVPSA 76 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECSCGGGTTCEETTEEEECGGGHHHHHHHHTCCEEEECCTTS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEECCcccCCCEecCeEEECHHHHHHHHHHCCCCEEEEeCCCC
Confidence 56899999999999999999854 8999886 65432110011233332 3555554 478999999954
No 481
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=91.68 E-value=0.15 Score=53.86 Aligned_cols=89 Identities=15% Similarity=0.158 Sum_probs=52.7
Q ss_pred ccCCEEEEEe-cChhHHHHHHHhhcCC-CEEEE-E-CCCC-ChhHH---------------HHcCCcccCHHHHhccCCE
Q 007512 195 LVGKTLAVLG-FGKVGSEVARRAKGLG-MHVIA-H-DPYA-PADRA---------------RAIGVDLVSFDEAIATADF 254 (600)
Q Consensus 195 l~gktiGIIG-lG~IG~~vA~~l~~~g-~~V~~-~-d~~~-~~~~a---------------~~~g~~~~~l~ell~~aDv 254 (600)
....+||||| .|.+|+++.+.|..+- +++.. + +++. -.... .+.-++..+.++.+.++|+
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~~~~Dv 96 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKPEGNFLECDV 96 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESSSCTTGGGCSE
T ss_pred CCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCchhhhcccCCE
Confidence 3446899999 7999999999998774 57743 3 3322 11111 1111211122225789999
Q ss_pred EEEecCCCccccccccHhHhccCCCceEEEEccC
Q 007512 255 ISLHMPLTPATSKVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 255 V~l~~Pl~~~t~~li~~~~l~~mk~gailvNvar 288 (600)
|++|+|... ++.+.. . ..+.|+.+||.+.
T Consensus 97 vf~alp~~~-s~~~~~-~---~~~~G~~VIDlSa 125 (381)
T 3hsk_A 97 VFSGLDADV-AGDIEK-S---FVEAGLAVVSNAK 125 (381)
T ss_dssp EEECCCHHH-HHHHHH-H---HHHTTCEEEECCS
T ss_pred EEECCChhH-HHHHHH-H---HHhCCCEEEEcCC
Confidence 999999332 222211 1 1467889999874
No 482
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.67 E-value=0.12 Score=56.00 Aligned_cols=66 Identities=20% Similarity=0.259 Sum_probs=49.2
Q ss_pred CCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCC-hhHH-HHcCCccc-----C---HHHH-hccCCEEEEecCCC
Q 007512 197 GKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAP-ADRA-RAIGVDLV-----S---FDEA-IATADFISLHMPLT 262 (600)
Q Consensus 197 gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~-~~~a-~~~g~~~~-----~---l~el-l~~aDvV~l~~Pl~ 262 (600)
.++|-|+|+|.+|+.+|+.|...|.+|.+.|.+.. .+.. ...++..+ + |+++ +.+||+++.+++..
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~D 79 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTD 79 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCCh
Confidence 56899999999999999999999999999998763 2222 34565321 2 4443 78899998877743
No 483
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=91.66 E-value=0.21 Score=49.83 Aligned_cols=64 Identities=23% Similarity=0.382 Sum_probs=47.2
Q ss_pred CCEEEEEec-ChhHHHHHHHhhcCCCEEEEECCCCC----hhHH------HHcCCccc--------CHHHHhccCCEEEE
Q 007512 197 GKTLAVLGF-GKVGSEVARRAKGLGMHVIAHDPYAP----ADRA------RAIGVDLV--------SFDEAIATADFISL 257 (600)
Q Consensus 197 gktiGIIGl-G~IG~~vA~~l~~~g~~V~~~d~~~~----~~~a------~~~g~~~~--------~l~ell~~aDvV~l 257 (600)
.++|.|.|. |.||+.+++.|...|.+|++.++..+ .+.+ ...|++.+ ++.++++.+|+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 468999995 99999999999988999999987652 2221 12354321 35667888999988
Q ss_pred ecC
Q 007512 258 HMP 260 (600)
Q Consensus 258 ~~P 260 (600)
+++
T Consensus 84 ~a~ 86 (308)
T 1qyc_A 84 TVG 86 (308)
T ss_dssp CCC
T ss_pred CCc
Confidence 776
No 484
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=91.59 E-value=0.25 Score=49.25 Aligned_cols=64 Identities=23% Similarity=0.209 Sum_probs=48.0
Q ss_pred CCEEEEEec-ChhHHHHHHHhhcCC-CEEEEECCCCChhH---HHHcCCcc--------cCHHHHhccCCEEEEecC
Q 007512 197 GKTLAVLGF-GKVGSEVARRAKGLG-MHVIAHDPYAPADR---ARAIGVDL--------VSFDEAIATADFISLHMP 260 (600)
Q Consensus 197 gktiGIIGl-G~IG~~vA~~l~~~g-~~V~~~d~~~~~~~---a~~~g~~~--------~~l~ell~~aDvV~l~~P 260 (600)
.|+|.|.|. |.||+.+++.|...| ++|.+.++...... ....+++. .++.++++.+|+|+.+.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 578999997 999999999998877 99999987763321 12345532 135678899999998775
No 485
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=91.57 E-value=0.15 Score=52.15 Aligned_cols=44 Identities=27% Similarity=0.382 Sum_probs=35.3
Q ss_pred cCCEEEEEec-ChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcC
Q 007512 196 VGKTLAVLGF-GKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIG 239 (600)
Q Consensus 196 ~gktiGIIGl-G~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g 239 (600)
.|+++.|+|. |.||..+++.++..|++|++.++.. ..+.+++.|
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g 190 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLG 190 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC
Confidence 4789999995 9999999999999999999998765 233344444
No 486
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=91.56 E-value=0.13 Score=55.73 Aligned_cols=33 Identities=21% Similarity=0.344 Sum_probs=27.0
Q ss_pred CEEEEEecChhHHHHHHHhhc-CCC---EEEEECCCC
Q 007512 198 KTLAVLGFGKVGSEVARRAKG-LGM---HVIAHDPYA 230 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~-~g~---~V~~~d~~~ 230 (600)
++|.|||+|.||+.+|+.|.. .++ +|+..|+..
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~ 50 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEG 50 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccch
Confidence 469999999999999999874 455 688888765
No 487
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=91.51 E-value=0.16 Score=45.04 Aligned_cols=97 Identities=19% Similarity=0.150 Sum_probs=64.6
Q ss_pred CEEEEEec----ChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCc-ccCHHHHhccCCEEEEecCCCccccccccHh
Q 007512 198 KTLAVLGF----GKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVD-LVSFDEAIATADFISLHMPLTPATSKVLNDE 272 (600)
Q Consensus 198 ktiGIIGl----G~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~-~~~l~ell~~aDvV~l~~Pl~~~t~~li~~~ 272 (600)
++|+|||. |+.|..+.+.|+.+|++|+..+|.... -.|.. +-++.++=. -|++++++| .+.+..++.+-
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~----i~G~~~y~sl~dlp~-vDlavi~~p-~~~v~~~v~e~ 78 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGE----VLGKTIINERPVIEG-VDTVTLYIN-PQNQLSEYNYI 78 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSE----ETTEECBCSCCCCTT-CCEEEECSC-HHHHGGGHHHH
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCc----CCCeeccCChHHCCC-CCEEEEEeC-HHHHHHHHHHH
Confidence 68999998 579999999999999999999987521 13444 336777666 999999999 44455555432
Q ss_pred HhccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 273 TFGKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 273 ~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
. .+...++++..| - .+ +++.+..++..+
T Consensus 79 ~--~~g~k~v~~~~G--~-~~-~e~~~~a~~~Gi 106 (122)
T 3ff4_A 79 L--SLKPKRVIFNPG--T-EN-EELEEILSENGI 106 (122)
T ss_dssp H--HHCCSEEEECTT--C-CC-HHHHHHHHHTTC
T ss_pred H--hcCCCEEEECCC--C-Ch-HHHHHHHHHcCC
Confidence 2 234446666543 2 34 445555555434
No 488
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=91.49 E-value=0.063 Score=55.85 Aligned_cols=86 Identities=13% Similarity=0.111 Sum_probs=50.3
Q ss_pred CEEEEEe-cChhHHHHHHHhhcC---CCEEEEECCCCChhHHHHc-C--CcccCHH-HHhccCCEEEEecCCCccccccc
Q 007512 198 KTLAVLG-FGKVGSEVARRAKGL---GMHVIAHDPYAPADRARAI-G--VDLVSFD-EAIATADFISLHMPLTPATSKVL 269 (600)
Q Consensus 198 ktiGIIG-lG~IG~~vA~~l~~~---g~~V~~~d~~~~~~~a~~~-g--~~~~~l~-ell~~aDvV~l~~Pl~~~t~~li 269 (600)
.+|+|+| .|.||+.+.+.|... .+++.++....+....... + +...+++ +.+..+|+|+.|+|... ++...
T Consensus 4 ~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~~~~~~~~~~~vDvVf~a~g~~~-s~~~a 82 (336)
T 2r00_A 4 FNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVEEFDWSQVHIALFSAGGEL-SAKWA 82 (336)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEEEEGGGCCGGGCSEEEECSCHHH-HHHHH
T ss_pred cEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEEecCChHHhcCCCEEEECCCchH-HHHHH
Confidence 5899999 999999999998754 4677765422111000000 1 1111221 24578999999998432 22221
Q ss_pred cHhHhccCCCceEEEEccC
Q 007512 270 NDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 270 ~~~~l~~mk~gailvNvar 288 (600)
. ..++.|+.+||.+.
T Consensus 83 ~----~~~~~G~~vId~s~ 97 (336)
T 2r00_A 83 P----IAAEAGVVVIDNTS 97 (336)
T ss_dssp H----HHHHTTCEEEECSS
T ss_pred H----HHHHcCCEEEEcCC
Confidence 1 12456888888764
No 489
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=91.48 E-value=0.12 Score=53.29 Aligned_cols=45 Identities=31% Similarity=0.452 Sum_probs=36.7
Q ss_pred cCCEEEEEecC-hhHHHHHHHhhcC-CCEEEEECCCC-ChhHHHHcCC
Q 007512 196 VGKTLAVLGFG-KVGSEVARRAKGL-GMHVIAHDPYA-PADRARAIGV 240 (600)
Q Consensus 196 ~gktiGIIGlG-~IG~~vA~~l~~~-g~~V~~~d~~~-~~~~a~~~g~ 240 (600)
.|+++.|+|.| .||..+++.++.. |++|++.|++. ..+.+++.|.
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~ 217 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA 217 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTC
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC
Confidence 47899999999 9999999999988 99999998765 3344555554
No 490
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=91.45 E-value=0.26 Score=50.01 Aligned_cols=105 Identities=15% Similarity=0.103 Sum_probs=69.3
Q ss_pred ccCCEEEEEecChhHHHHHHHhhcCCCEEEEECCCCChhHHHHcCCccc-CHHHHhccCCEEEEecCCCc----------
Q 007512 195 LVGKTLAVLGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLV-SFDEAIATADFISLHMPLTP---------- 263 (600)
Q Consensus 195 l~gktiGIIGlG~IG~~vA~~l~~~g~~V~~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Pl~~---------- 263 (600)
+.|++|.++|-........+.|...|++|..+.... +...+.|.... ++.+.++++|+|+...|...
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~--~~~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~a 82 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQ--LDHGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVFS 82 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCTT--SSCCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSSC
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeccc--cccccccceeccchHHHHhcCCEEEeccccccCCcccccccc
Confidence 568899999999999999999999999998764211 11111233222 46677899999987554321
Q ss_pred cccccccHhHhccCCCceEEEEccCCccccHHHHHHhHhcCCc
Q 007512 264 ATSKVLNDETFGKMKKGVRIINVARGGVIDEEALVRALDSGRV 306 (600)
Q Consensus 264 ~t~~li~~~~l~~mk~gailvNvarg~ivde~aL~~aL~~g~i 306 (600)
.+...++++.++.++++.+|. ++ . |..++.+++.+..|
T Consensus 83 ~~~~~~~~~~l~~~~~l~~i~-~g---~-~~~d~~~~~~~~gi 120 (300)
T 2rir_A 83 NEEVVLKQDHLDRTPAHCVIF-SG---I-SNAYLENIAAQAKR 120 (300)
T ss_dssp SSCEECCHHHHHTSCTTCEEE-ES---S-CCHHHHHHHHHTTC
T ss_pred cCCccchHHHHhhcCCCCEEE-Ee---c-CCHHHHHHHHHCCC
Confidence 123347788899999988877 33 2 54554445555444
No 491
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=91.28 E-value=0.21 Score=53.45 Aligned_cols=87 Identities=21% Similarity=0.195 Sum_probs=62.3
Q ss_pred cCCEEEEEec-ChhHHHHHHHhhcCCCEEEEECCCC-ChhHHHHcCCccc-CH------------------------HH-
Q 007512 196 VGKTLAVLGF-GKVGSEVARRAKGLGMHVIAHDPYA-PADRARAIGVDLV-SF------------------------DE- 247 (600)
Q Consensus 196 ~gktiGIIGl-G~IG~~vA~~l~~~g~~V~~~d~~~-~~~~a~~~g~~~~-~l------------------------~e- 247 (600)
.|++|.|+|. |.||...++.++..|.+|++.+... ..+.++++|...+ +. ++
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 299 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLV 299 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHH
Confidence 5899999998 9999999999999999999987654 3456677776421 11 11
Q ss_pred --Hh-ccCCEEEEecCCCccccccccHhHhccCCCceEEEEccC
Q 007512 248 --AI-ATADFISLHMPLTPATSKVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 248 --ll-~~aDvV~l~~Pl~~~t~~li~~~~l~~mk~gailvNvar 288 (600)
+. ...|+|+-++.. + .-...+..|+++..+++++.
T Consensus 300 ~~~~g~g~Dvvid~~G~-~-----~~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 300 VEKAGREPDIVFEHTGR-V-----TFGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHSSCCSEEEECSCH-H-----HHHHHHHHSCTTCEEEESCC
T ss_pred HHHhCCCceEEEECCCc-h-----HHHHHHHHHhcCCEEEEEec
Confidence 11 247888887762 1 12445667888888888874
No 492
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=91.25 E-value=0.13 Score=50.85 Aligned_cols=62 Identities=16% Similarity=0.231 Sum_probs=44.1
Q ss_pred EEEEEec-ChhHHHHHHHhhcC--CCEEEEECCCCCh-hHHHHcCCcc--------cCHHHHhccCCEEEEecC
Q 007512 199 TLAVLGF-GKVGSEVARRAKGL--GMHVIAHDPYAPA-DRARAIGVDL--------VSFDEAIATADFISLHMP 260 (600)
Q Consensus 199 tiGIIGl-G~IG~~vA~~l~~~--g~~V~~~d~~~~~-~~a~~~g~~~--------~~l~ell~~aDvV~l~~P 260 (600)
+|.|.|. |.||+.+++.|... |++|++.++.... ......++.. .+++++++.+|+|+.+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 4678886 99999999999987 9999998876532 2222334422 135678889999987765
No 493
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=91.22 E-value=0.087 Score=53.74 Aligned_cols=100 Identities=18% Similarity=0.238 Sum_probs=61.3
Q ss_pred EEEEEec-ChhHHHHHHHhhcCCCEE-EEECCCCChhHHHHcCCcc-cCHHHHhc--cCCEEEEecCCCccccccccHhH
Q 007512 199 TLAVLGF-GKVGSEVARRAKGLGMHV-IAHDPYAPADRARAIGVDL-VSFDEAIA--TADFISLHMPLTPATSKVLNDET 273 (600)
Q Consensus 199 tiGIIGl-G~IG~~vA~~l~~~g~~V-~~~d~~~~~~~a~~~g~~~-~~l~ell~--~aDvV~l~~Pl~~~t~~li~~~~ 273 (600)
++.|+|. |++|+.+++.++..|+++ ...+|...... -.|+.. .+++++.. .+|++++++| .+.+...+.+ .
T Consensus 15 ~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~g~~--i~G~~vy~sl~el~~~~~~Dv~ii~vp-~~~~~~~v~e-a 90 (294)
T 2yv1_A 15 KAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQN--VHGVPVFDTVKEAVKETDANASVIFVP-APFAKDAVFE-A 90 (294)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCTTCE--ETTEEEESSHHHHHHHHCCCEEEECCC-HHHHHHHHHH-H
T ss_pred EEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCCCce--ECCEeeeCCHHHHhhcCCCCEEEEccC-HHHHHHHHHH-H
Confidence 5788899 999999999999888873 35677542111 146653 47999988 8999999999 3333333322 2
Q ss_pred hccCCCceEEEEccCCc-cccHHHHHHhHhcC
Q 007512 274 FGKMKKGVRIINVARGG-VIDEEALVRALDSG 304 (600)
Q Consensus 274 l~~mk~gailvNvarg~-ivde~aL~~aL~~g 304 (600)
.+ .+... +|..+.|= ..+++.+.++.++.
T Consensus 91 ~~-~Gi~~-vVi~t~G~~~~~~~~l~~~A~~~ 120 (294)
T 2yv1_A 91 ID-AGIEL-IVVITEHIPVHDTMEFVNYAEDV 120 (294)
T ss_dssp HH-TTCSE-EEECCSCCCHHHHHHHHHHHHHH
T ss_pred HH-CCCCE-EEEECCCCCHHHHHHHHHHHHHc
Confidence 22 22222 33343332 12455677666653
No 494
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=91.12 E-value=0.19 Score=54.49 Aligned_cols=61 Identities=18% Similarity=0.265 Sum_probs=47.0
Q ss_pred CCEEEEEecChhHHH-HHHHhhcCCCEEEEECCCCCh--hHHHHcCCccc---CHHHHhccCCEEEEe
Q 007512 197 GKTLAVLGFGKVGSE-VARRAKGLGMHVIAHDPYAPA--DRARAIGVDLV---SFDEAIATADFISLH 258 (600)
Q Consensus 197 gktiGIIGlG~IG~~-vA~~l~~~g~~V~~~d~~~~~--~~a~~~g~~~~---~l~ell~~aDvV~l~ 258 (600)
-|+|.|||+|.+|.+ +|+.|+..|++|.++|...+. +...+.|+... .. +.+..+|+|++.
T Consensus 18 ~~~i~viG~G~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~-~~~~~a~~vv~s 84 (475)
T 1p3d_A 18 VQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAE-EHIEGASVVVVS 84 (475)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCG-GGGTTCSEEEEC
T ss_pred CCEEEEEeecHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHhCCCEEECCCCH-HHcCCCCEEEEC
Confidence 468999999999998 999999999999999987643 23345676542 23 345789999885
No 495
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=91.09 E-value=0.3 Score=49.80 Aligned_cols=68 Identities=18% Similarity=0.236 Sum_probs=48.5
Q ss_pred eccCCEEEEEe-cChhHHHHHHHhhcCCCEEEEECCCCC--hhHHH---H-------cCCcc--------cCHHHHhccC
Q 007512 194 SLVGKTLAVLG-FGKVGSEVARRAKGLGMHVIAHDPYAP--ADRAR---A-------IGVDL--------VSFDEAIATA 252 (600)
Q Consensus 194 ~l~gktiGIIG-lG~IG~~vA~~l~~~g~~V~~~d~~~~--~~~a~---~-------~g~~~--------~~l~ell~~a 252 (600)
.+.+++|.|.| .|.||+.+++.|...|.+|++.++... ..... . .++.. .+++++++.+
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 45689999999 599999999999999999999987652 11111 1 23321 1255677888
Q ss_pred CEEEEecCC
Q 007512 253 DFISLHMPL 261 (600)
Q Consensus 253 DvV~l~~Pl 261 (600)
|+|+-+...
T Consensus 102 d~Vih~A~~ 110 (351)
T 3ruf_A 102 DHVLHQAAL 110 (351)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCcc
Confidence 888777653
No 496
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=91.06 E-value=0.2 Score=50.04 Aligned_cols=65 Identities=18% Similarity=0.262 Sum_probs=47.1
Q ss_pred CCEEEEEec-ChhHHHHHHHhhcCCCEEEEECCCC----Ch-hHH------HHcCCccc--------CHHHHhccCCEEE
Q 007512 197 GKTLAVLGF-GKVGSEVARRAKGLGMHVIAHDPYA----PA-DRA------RAIGVDLV--------SFDEAIATADFIS 256 (600)
Q Consensus 197 gktiGIIGl-G~IG~~vA~~l~~~g~~V~~~d~~~----~~-~~a------~~~g~~~~--------~l~ell~~aDvV~ 256 (600)
+++|.|.|. |.||+.+++.|...|++|++.++.. .. +.+ ...+++.+ ++.++++.+|+|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 578999995 9999999999998899999987764 11 211 12455321 3567788899998
Q ss_pred EecCC
Q 007512 257 LHMPL 261 (600)
Q Consensus 257 l~~Pl 261 (600)
.+++.
T Consensus 82 ~~a~~ 86 (307)
T 2gas_A 82 CAAGR 86 (307)
T ss_dssp ECSSS
T ss_pred ECCcc
Confidence 87764
No 497
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=90.99 E-value=0.65 Score=50.02 Aligned_cols=36 Identities=25% Similarity=0.260 Sum_probs=32.0
Q ss_pred ceeccCCEEEEEecChhHHHHHHHhhcCCCEEE-EEC
Q 007512 192 GVSLVGKTLAVLGFGKVGSEVARRAKGLGMHVI-AHD 227 (600)
Q Consensus 192 g~~l~gktiGIIGlG~IG~~vA~~l~~~g~~V~-~~d 227 (600)
|.++.|+|+.|-|+|++|+..|+.|...|.+|+ +.|
T Consensus 234 g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD 270 (456)
T 3r3j_A 234 NDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSD 270 (456)
T ss_dssp TCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEEC
T ss_pred CCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 567999999999999999999999999999987 344
No 498
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=90.90 E-value=0.16 Score=53.29 Aligned_cols=85 Identities=18% Similarity=0.148 Sum_probs=52.5
Q ss_pred CEEEEEe-cChhHHHHHHHhhcC-CCEEEEEC-CCC-ChhHHH---------------HcCCcccCHHHHhccCCEEEEe
Q 007512 198 KTLAVLG-FGKVGSEVARRAKGL-GMHVIAHD-PYA-PADRAR---------------AIGVDLVSFDEAIATADFISLH 258 (600)
Q Consensus 198 ktiGIIG-lG~IG~~vA~~l~~~-g~~V~~~d-~~~-~~~~a~---------------~~g~~~~~l~ell~~aDvV~l~ 258 (600)
.+||||| .|.+|+.+.+.|..+ .+++.... ++. -..... +..+...+.+ .+.++|+|++|
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~-~~~~vDvvf~a 86 (359)
T 4dpk_A 8 LKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPK-LMDDVDIIFSP 86 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGG-GCTTCCEEEEC
T ss_pred CeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHH-HhcCCCEEEEC
Confidence 5799999 799999999999876 45766542 221 111111 1112222333 35899999999
Q ss_pred cCCCccccccccHhHhccCCCceEEEEccC
Q 007512 259 MPLTPATSKVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 259 ~Pl~~~t~~li~~~~l~~mk~gailvNvar 288 (600)
+|... ++.+.. ..++.|+.+||.+.
T Consensus 87 ~p~~~-s~~~a~----~~~~~G~~vIDlSa 111 (359)
T 4dpk_A 87 LPQGA-AGPVEE----QFAKEGFPVISNSP 111 (359)
T ss_dssp CCTTT-HHHHHH----HHHHTTCEEEECSS
T ss_pred CChHH-HHHHHH----HHHHCCCEEEEcCC
Confidence 99543 222211 12467999999874
No 499
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=90.90 E-value=0.16 Score=53.29 Aligned_cols=85 Identities=18% Similarity=0.148 Sum_probs=52.5
Q ss_pred CEEEEEe-cChhHHHHHHHhhcC-CCEEEEEC-CCC-ChhHHH---------------HcCCcccCHHHHhccCCEEEEe
Q 007512 198 KTLAVLG-FGKVGSEVARRAKGL-GMHVIAHD-PYA-PADRAR---------------AIGVDLVSFDEAIATADFISLH 258 (600)
Q Consensus 198 ktiGIIG-lG~IG~~vA~~l~~~-g~~V~~~d-~~~-~~~~a~---------------~~g~~~~~l~ell~~aDvV~l~ 258 (600)
.+||||| .|.+|+.+.+.|..+ .+++.... ++. -..... +..+...+.+ .+.++|+|++|
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~-~~~~vDvvf~a 86 (359)
T 4dpl_A 8 LKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPK-LMDDVDIIFSP 86 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGG-GCTTCCEEEEC
T ss_pred CeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHH-HhcCCCEEEEC
Confidence 5799999 799999999999876 45766542 221 111111 1112222333 35899999999
Q ss_pred cCCCccccccccHhHhccCCCceEEEEccC
Q 007512 259 MPLTPATSKVLNDETFGKMKKGVRIINVAR 288 (600)
Q Consensus 259 ~Pl~~~t~~li~~~~l~~mk~gailvNvar 288 (600)
+|... ++.+.. ..++.|+.+||.+.
T Consensus 87 ~p~~~-s~~~a~----~~~~~G~~vIDlSa 111 (359)
T 4dpl_A 87 LPQGA-AGPVEE----QFAKEGFPVISNSP 111 (359)
T ss_dssp CCTTT-HHHHHH----HHHHTTCEEEECSS
T ss_pred CChHH-HHHHHH----HHHHCCCEEEEcCC
Confidence 99543 222211 12467999999874
No 500
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=90.85 E-value=0.22 Score=51.88 Aligned_cols=31 Identities=29% Similarity=0.504 Sum_probs=26.1
Q ss_pred CEEEEEecChhHHHHHHHhhc---C-CCEEEEECC
Q 007512 198 KTLAVLGFGKVGSEVARRAKG---L-GMHVIAHDP 228 (600)
Q Consensus 198 ktiGIIGlG~IG~~vA~~l~~---~-g~~V~~~d~ 228 (600)
.+|||+|+|+||+.+.+.|.. . +++|.+.+.
T Consensus 3 ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~ 37 (339)
T 2x5j_O 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE 37 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEEC
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeC
Confidence 379999999999999999887 4 688877643
Done!