Query 007513
Match_columns 600
No_of_seqs 375 out of 2539
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 03:37:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007513.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007513hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ddh_A Acyl-COA oxidase; beta 100.0 4.7E-96 2E-100 823.4 62.4 591 1-598 1-602 (661)
2 1w07_A Acyl-COA oxidase; oxido 100.0 2E-95 7E-100 819.7 67.0 596 1-598 1-599 (659)
3 2z1q_A Acyl-COA dehydrogenase; 100.0 3.3E-60 1.1E-64 527.0 40.3 472 27-566 28-524 (577)
4 3owa_A Acyl-COA dehydrogenase; 100.0 3.9E-59 1.3E-63 518.2 44.5 503 27-588 33-567 (597)
5 2uxw_A VERY-long-chain specifi 100.0 2.3E-54 7.9E-59 481.2 43.9 487 33-579 56-583 (607)
6 2jif_A Short/branched chain sp 100.0 8.7E-56 3E-60 472.3 30.6 358 25-440 27-403 (404)
7 2d29_A Acyl-COA dehydrogenase; 100.0 3.5E-55 1.2E-59 465.6 31.6 357 26-439 6-385 (387)
8 3pfd_A Acyl-COA dehydrogenase; 100.0 6.1E-56 2.1E-60 472.2 25.6 363 18-439 12-393 (393)
9 1ukw_A Acyl-COA dehydrogenase; 100.0 2.8E-55 9.6E-60 465.0 30.6 355 27-439 5-378 (379)
10 1buc_A Butyryl-COA dehydrogena 100.0 4.9E-55 1.7E-59 463.9 31.8 357 26-438 4-382 (383)
11 2vig_A Short-chain specific ac 100.0 5.5E-55 1.9E-59 464.6 31.6 360 26-442 5-383 (391)
12 1ivh_A Isovaleryl-COA dehydrog 100.0 3.3E-55 1.1E-59 466.8 28.8 359 26-441 12-393 (394)
13 1egd_A Medium chain acyl-COA d 100.0 4E-55 1.4E-59 466.4 29.1 359 26-441 15-394 (396)
14 3r7k_A Probable acyl COA dehyd 100.0 6.2E-55 2.1E-59 465.9 29.1 354 26-437 28-401 (403)
15 2dvl_A Acyl-COA dehydrogenase; 100.0 6.3E-55 2.2E-59 461.1 28.7 351 27-439 3-372 (372)
16 3p4t_A Putative acyl-COA dehyd 100.0 9.6E-55 3.3E-59 464.4 30.2 362 17-437 18-399 (403)
17 2pg0_A Acyl-COA dehydrogenase; 100.0 2.2E-54 7.4E-59 459.1 32.2 355 26-437 9-383 (385)
18 1rx0_A Acyl-COA dehydrogenase 100.0 2.4E-54 8.3E-59 459.8 31.0 356 26-439 18-392 (393)
19 4hr3_A Putative acyl-COA dehyd 100.0 3.9E-54 1.3E-58 461.6 30.3 362 26-442 8-413 (415)
20 3ii9_A Glutaryl-COA dehydrogen 100.0 6.8E-55 2.3E-59 464.6 24.1 355 26-439 18-391 (396)
21 3nf4_A Acyl-COA dehydrogenase; 100.0 1.4E-54 4.9E-59 460.9 26.0 354 26-439 15-387 (387)
22 3sf6_A Glutaryl-COA dehydrogen 100.0 8.9E-54 3.1E-58 456.9 29.9 351 26-439 29-398 (403)
23 3swo_A Glutaryl-COA dehydrogen 100.0 7.2E-54 2.5E-58 457.2 28.2 364 13-439 11-393 (399)
24 2ix5_A Acyl-coenzyme A oxidase 100.0 6.6E-54 2.3E-58 461.3 28.0 353 26-439 54-424 (436)
25 2eba_A Putative glutaryl-COA d 100.0 1.6E-53 5.3E-58 452.5 29.5 352 26-439 10-381 (385)
26 2wbi_A Acyl-COA dehydrogenase 100.0 6.7E-53 2.3E-57 453.5 33.9 376 16-443 14-422 (428)
27 3mpi_A Glutaryl-COA dehydrogen 100.0 3.2E-53 1.1E-57 452.0 25.4 354 26-437 4-382 (397)
28 1siq_A GCD, glutaryl-COA dehyd 100.0 2.1E-52 7E-57 445.0 28.1 354 26-439 13-384 (392)
29 1r2j_A Protein FKBI; polyketid 100.0 4.2E-52 1.4E-56 438.4 27.0 318 69-439 26-363 (366)
30 3mkh_A Nitroalkane oxidase; ox 100.0 4.5E-51 1.5E-55 441.0 32.6 370 26-440 6-417 (438)
31 2c12_A Nitroalkane oxidase; ox 100.0 5.7E-49 2E-53 424.5 32.2 365 26-438 5-418 (439)
32 3mxl_A Nitrososynthase; flavin 100.0 3.7E-48 1.3E-52 412.8 21.0 359 26-439 8-393 (395)
33 2or0_A Hydroxylase; APC7385, r 100.0 9.8E-47 3.4E-51 404.1 22.7 356 27-439 18-401 (414)
34 3m9v_A FAD-dependent oxidoredu 100.0 2.3E-46 7.7E-51 404.3 24.6 368 17-440 12-405 (439)
35 3djl_A Protein AIDB; alpha hel 100.0 3.7E-45 1.3E-49 401.2 27.7 323 70-439 89-441 (541)
36 2rfq_A 3-HSA hydroxylase, oxyg 100.0 2E-45 7E-50 391.5 24.8 350 33-439 11-386 (394)
37 2jbr_A P-hydroxyphenylacetate 100.0 1.5E-45 5E-50 395.8 21.9 351 33-439 39-414 (422)
38 2yyk_A 4-hydroxyphenylacetate- 100.0 5.4E-34 1.9E-38 308.5 24.6 272 115-437 122-422 (481)
39 1u8v_A Gamma-aminobutyrate met 100.0 5.4E-34 1.9E-38 309.0 23.5 274 109-431 119-420 (490)
40 3hwc_A Chlorophenol-4-monooxyg 100.0 2.7E-29 9.3E-34 271.4 27.1 281 113-438 127-431 (515)
41 4g5e_A 2,4,6-trichlorophenol 4 99.9 7.1E-22 2.4E-26 213.8 27.0 254 117-415 134-400 (517)
42 3owa_A Acyl-COA dehydrogenase; 90.6 2.1 7.1E-05 47.0 13.1 120 299-439 471-591 (597)
43 2uxw_A VERY-long-chain specifi 56.5 75 0.0026 34.5 12.2 67 322-399 509-575 (607)
44 2k6o_A Cathelicidin antimicrob 26.1 80 0.0027 20.2 3.4 23 578-600 14-36 (37)
No 1
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=100.00 E-value=4.7e-96 Score=823.38 Aligned_cols=591 Identities=43% Similarity=0.736 Sum_probs=508.3
Q ss_pred CCCccchHHHhccCCCCHHHHHHHHcCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcc
Q 007513 1 MDGVDQLAPERKKAQFDVDEMKIVWAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELR 80 (600)
Q Consensus 1 ~~~~~~l~~~r~~~~f~~~~l~~~~~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (600)
|+| ||++||++++||+++|..+|+|++++.++|+++++++.++|.|.......+++++.++....+.+.+.+.+.++|
T Consensus 1 ~~~--~l~~er~~~~f~~~~l~~~l~g~~~~~~~r~~~~~~l~~~p~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~~ 78 (661)
T 2ddh_A 1 MNP--DLRKERASATFNPELITHILDGSPENTRRRREIENLILNDPDFQHEDYNFLTRSQRYEVAVKKSATMVKKMREYG 78 (661)
T ss_dssp CCH--HHHHHHHHCSSCHHHHHHHHHTSHHHHHHHHHHHHHHHTCGGGCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCh--HHHHHHhhCCCCHHHHHHHHCCChhHHHHHHHHHHHHhcCcccccCCcCCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 566 999999999999999999999999999999999999999998876544568888888888777777777667788
Q ss_pred CCHHHH-HHHHhhcCC--chhhHhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeC
Q 007513 81 LSEEEA-SMLRSSVDE--PAFTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDP 157 (600)
Q Consensus 81 ~~~~~~-g~~~~~~~~--~~~~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~ 157 (600)
+..... .....+++. +.++.+|+++++++|..+||++|+++|||++.+|++++|||+|||+||||+.+++|+|++|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~h~~l~~~~i~~~Gt~eq~~~~L~~i~~Ge~~g~~a~TE~g~GSd~~~l~TtA~~d~ 158 (661)
T 2ddh_A 79 ISDPEEIMWFKNSVHRGHPEPLDLHLGMFLPTLLHQATAEQQERFFMPAWNLEITGTYAQTEMGHGTHLRGLETTATYDP 158 (661)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTHHHHHTHHHHHC-CCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEET
T ss_pred CCCchHHHHHHHHhccchhhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEeeccCCcCcCcccceeEEEEcC
Confidence 753221 112222332 57788998899999999999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEecCCCCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcc
Q 007513 158 QTDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTM 237 (600)
Q Consensus 158 ~~~~~vlntp~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~ 237 (600)
++|+|+||||+++|+|+||+|++.+||+++|+|+++++++++|+++|+||+||+++|.+.|||+|+++|+|+| ++++
T Consensus 159 ~~~~~vLntP~~~G~K~wis~~a~~Ad~~vV~Ar~~~~~~~~G~~~FlVp~rd~~~~~~~pGV~v~~~~~k~G---l~g~ 235 (661)
T 2ddh_A 159 KTQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQLITQGECYGLHAFVVPIREIGTHKPLPGITVGDIGPKFG---YEEM 235 (661)
T ss_dssp TTTEEEEECCSSTTSEECCTTTTTTCSEEEEEEEEEETTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCCSS---CTTC
T ss_pred CCCeEEEcCCCCCeEEEecCCCcccCCEEEEEEEEccCCCCCceEEEEEecccccCCCCCCCeEEecCccccc---CCCC
Confidence 8899999999999999999986789999999999987666779999999999999999999999999999999 9999
Q ss_pred cceeEEecceecCcCcccc-cccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCC
Q 007513 238 DNGVLRFEHVRIPRNQMLM-VSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKN 316 (600)
Q Consensus 238 ~~~~v~fd~v~VP~~~lL~-~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~ 316 (600)
+++.|.||||+||++++|+ +++|.++|.+..+.... ..+..|..+|+.+++.++|+++++++++++|++.|+|||+++
T Consensus 236 ~~~~v~Fd~VrVP~~~lLg~~~~v~~~G~~~~~~~~~-~~~~~l~~~R~~iaa~~~G~a~~al~~a~~ya~~R~qfg~~~ 314 (661)
T 2ddh_A 236 DNGYLKMDNYRIPRENMLMKYAQVKPDGTYVKPLSNK-LTYGTMVFVRSFLVGNAAQSLSKACTIAIRYSAVRRQSEIKQ 314 (661)
T ss_dssp CCEEEEESSEEEEGGGBCCSSCEECTTCCEECCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCSST
T ss_pred cceEEEeccEEECHHHhcCcccccCCCCceeccchHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCCC
Confidence 9999999999999999999 77777778876543333 567788899999999999999999999999999999999866
Q ss_pred CCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHH
Q 007513 317 GGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRK 396 (600)
Q Consensus 317 ~~~~~~i~~~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q 396 (600)
+.+|.||++||.+|++|+++++.+++++++++++++.+++.....+.++.....+.+..++++|+++++.+.+++++|+|
T Consensus 315 ~~~e~~i~~~q~vq~rLa~~~a~~~aar~~~~~aa~~~~~~~~~~~~g~~~~~~~~~~~aa~aK~~at~~a~~~~~~a~q 394 (661)
T 2ddh_A 315 SEPEPQILDFQTQQYKLFPLLATAYAFHFVGRYMKETYLRINESIGQGDLSELPELHALTAGLKAFTTWTANAGIEECRM 394 (661)
T ss_dssp TSCCCBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888999999999999999999999999999999888644322222222223467888999999999999999999999
Q ss_pred HhccccccccCChhHHhhhhcccccccchhHHHHHHHHHHHHHHHHHhcCCCCCccccccccchh-HhhhhcC--Ccccc
Q 007513 397 LCGGHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGRAE-QLMQCHC--GVQKA 473 (600)
Q Consensus 397 ~~GG~G~~~~~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~~~~~~~~~~~~~~~~~yl~~~~-~~~~~~~--~~~~~ 473 (600)
+|||+||++++++++++||++..++++|+|+++++++|+.+|+.+++..++..+.++..||.+.. ...+.++ ...+.
T Consensus 395 ~~GG~G~~~~~~l~r~~rda~~~~~~eG~~~vl~~~iar~lL~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 474 (661)
T 2ddh_A 395 ACGGHGYSHSSGIPNIYVTFTPACTFEGENTVMMLQTARFLMKIYDQVRSGKLVGGMVSYLNDLPSQRIQPQQVAVWPTM 474 (661)
T ss_dssp HTTHHHHSGGGSHHHHHHHHGGGGTSSSCHHHHHHHHHHHHHHHHHHHHHTCCCCGGGGGGGGCCC--------------
T ss_pred HhCcccccccCcHHHHHHhcceeeEecCchHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHhhhhhhccccccccccch
Confidence 99999999999999999999999999999999999999999999988766665567889997643 2211111 11246
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHh----cCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChHH
Q 007513 474 EDWLNPSAILEAFEARAIRMSVACAQNLSK----FTNQEEGFAELAADLVEAAVAHCQLIVVSKFIEKLQQDIPGKGVKP 549 (600)
Q Consensus 474 ~~~~~~~~l~~~~~~r~~~~~~~~~~~l~~----~~~~~~~~n~~~~~l~~la~a~~~~~~l~~f~~~v~~~~~~~~~~~ 549 (600)
.++.||++++++|++|+++++..+++++++ +++.+++||+++++++++|+||+++++++.|++.|++ +++++++.
T Consensus 475 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~g~~~~~a~n~~~~~~~~~a~a~~~~~~~~~f~~~~~~-~~~~~~~~ 553 (661)
T 2ddh_A 475 VDINSLEGLTEAYKLRAARLVEIAAKNLQTHVSHRKSKEVAWNLTSVDLVRASEAHCHYVVVKVFSDKLPK-IQDKAVQA 553 (661)
T ss_dssp CCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHGGG-CSSHHHHH
T ss_pred hhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCChhHHH
Confidence 788999999999999999999998888743 4567899999999999999999999999999999997 88899999
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHhcCCCCHHHHHHHHHHHHHHHHhhcCc
Q 007513 550 ILEILCHIYALHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVFTC 598 (600)
Q Consensus 550 vL~~l~~L~aL~~i~~~~~~fl~~~~ls~~q~~~i~~~~~~l~~~lr~~ 598 (600)
+|.+||.||+|+.|+++++||+++||||++|++.|++.|.+||.+|||+
T Consensus 554 ~L~~l~~L~~l~~i~~~~~~~l~~~~~s~~~~~~~~~~~~~l~~~lrp~ 602 (661)
T 2ddh_A 554 VLRNLCLLYSLYGISQKGGDFLEGSIITGAQLSQVNARILELLTLIRPN 602 (661)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHTTSSCHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999997
No 2
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=100.00 E-value=2e-95 Score=819.65 Aligned_cols=596 Identities=81% Similarity=1.262 Sum_probs=511.3
Q ss_pred CCCccchHHHhccCCCCHHHHHHHHcCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHcc
Q 007513 1 MDGVDQLAPERKKAQFDVDEMKIVWAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELR 80 (600)
Q Consensus 1 ~~~~~~l~~~r~~~~f~~~~l~~~~~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (600)
|.|.++|++||++++||+++|..++++++||.++|+++++|+.++|.|........+.++.+...+.....+.....++|
T Consensus 1 ~~~~~~l~~er~~~~f~~~~l~~~~~~~~e~~~lr~~vr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~p~e~G 80 (659)
T 1w07_A 1 MEGIDHLADERNKAEFDVEDMKIVWAGSRHAFEVSDRIARLVASDPVFEKSNRARLSRKELFKSTLRKCAHAFKRIIELR 80 (659)
T ss_dssp -CCCCTTHHHHTTCSSCHHHHHHHHHSSHHHHHHHHHHHHHHHTCGGGCCTTTTSSCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCchHHHHHHHccCCCCHHHHHHHHCCChHHHHHHHHHHHHHhcCcccccCCccCCChHHHHHHHHHHHHHHHHhHHHhC
Confidence 77889999999999999999999999889999999999999999988753222233444433333322211111222444
Q ss_pred CCHHHHHHHHhhcCCchhhHhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCC
Q 007513 81 LSEEEASMLRSSVDEPAFTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTD 160 (600)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~ 160 (600)
+...........++.+.++.+|+++++++|..+||++|+++|||++++|++++|+|+|||+||||+.+++|+|++|+++|
T Consensus 81 ~~~~~~~~v~e~~~~~~~~~~~~~l~~~~l~~~Gt~eqk~~~L~~i~~Ge~~~~~a~TEp~~GSd~~~l~TtA~~d~~~~ 160 (659)
T 1w07_A 81 LNEEEAGRLRHFIDQPAYVDLHWGMFVPAIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATLDPKTD 160 (659)
T ss_dssp CCHHHHHHHHHHHCCCCHHHHHHHTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTT
T ss_pred CCchHHHHHHHHhccchhhhhHHhHHHHHHHHcCCHHHHHHHhhHHhcCCEEEEEEecCCCCCCCcccceeEEEEcCCCC
Confidence 33222222223345555577888899999999999999999999999999999999999999999999999999998789
Q ss_pred eEEEecCCCCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccce
Q 007513 161 EFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNG 240 (600)
Q Consensus 161 ~~vlntp~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~ 240 (600)
+|+||||+++|+|+||+|++..||+++|+|+++.+++++|+++|+||+||+++|.+.|||+|+++|+|+|.+++++++++
T Consensus 161 g~vLntP~~~G~K~~is~~a~~Ad~~lV~Ar~~~~~~~~G~~~flVp~r~~~~~~~~pGV~v~~~~~~~G~~~~~g~~~~ 240 (659)
T 1w07_A 161 EFVIHTPTQTASKWWPGGLGKVSTHAVVYARLITNGKDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNG 240 (659)
T ss_dssp EEEEECCSGGGSEECCTTTTTTCSEEEEEEEEEETTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCBSSSSGGGGSCCE
T ss_pred EEEEcCCCCCeEEEeecCCCCCCCEEEEEEEECCCCCCCCeEEEEEEccccCCCCCCCCeEEecCccCccccccCCCCce
Confidence 99999999999999999856899999999999876666799999999999889999999999999999985567899999
Q ss_pred eEEecceecCcCcccc-cccccCCCceecc-CcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCC
Q 007513 241 VLRFEHVRIPRNQMLM-VSQVTREGKYVQS-NVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGG 318 (600)
Q Consensus 241 ~v~fd~v~VP~~~lL~-~~~v~~~g~~~~~-~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~ 318 (600)
.|.||||+||++++|+ +++|.++|.++.+ ..++ ..+..|..+|+.+++.++|+++++++++++|+++|+|||++++.
T Consensus 241 ~v~fd~VrVP~~~lLg~~~~v~~~g~~~~~~~~~~-~~~~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~ 319 (659)
T 1w07_A 241 FLMFDHVRIPRDQMLMRLSKVTREGEYVPSDVPKQ-LVYGTMVYVRQTIVADASNALSRAVCIATRYSAVRRQFGAHNGG 319 (659)
T ss_dssp EEEESSEEEEGGGBCCSSEEECTTCCEEECSSCGG-GCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCC---C
T ss_pred EEEeccEEECHHHhcCCcCccCCCCceecCCccHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCC
Confidence 9999999999999999 8888778888763 2222 45677889999999999999999999999999999999986667
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHh
Q 007513 319 PETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLC 398 (600)
Q Consensus 319 ~~~~i~~~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~ 398 (600)
+|.||++||.+|++|+++++.+++++++++++++.+++.....+.++.....+.+..++++|+++++.+.+++++|+|+|
T Consensus 320 ~e~pi~~~q~vq~rLa~~~a~~~a~~~~~~~aa~~~~~~~~~~~~g~~~~~~~~~~~~a~aK~~at~~a~~~~~~a~q~~ 399 (659)
T 1w07_A 320 IETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTERLAASDFATLPEAHACTAGLKSLTTTATADGIEECRKLC 399 (659)
T ss_dssp CCCBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 78899999999999999999999999999999998877655544433322346788899999999999999999999999
Q ss_pred ccccccccCChhHHhhhhcccccccchhHHHHHHHHHHHHHHHHHhcCCCCCccccccccchhHhhhhcCCccccCCCCC
Q 007513 399 GGHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGRAEQLMQCHCGVQKAEDWLN 478 (600)
Q Consensus 399 GG~G~~~~~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~ 478 (600)
||+||+++++++++|||++..++++|+|+++++++++.+|+.+++..+++++.++..||.+.......+....+..++.|
T Consensus 400 GG~G~~~~~~l~r~~rda~~~~~~eG~~~v~~~~iar~lL~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 479 (659)
T 1w07_A 400 GGHGYLWCSGLPELFAVYVPACTYEGDNVVLQLQVARFLMKTVAQLGSGKVPVGTTAYMGRAAHLLQCRSGVQKAEDWLN 479 (659)
T ss_dssp GGGGGBGGGSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHHHTTTTTSCCCCGGGGGGGGHHHHTSCCCCCCSGGGGGC
T ss_pred cCcccccccCHHHHHHhcceeEEEeCChHHHHHHHHHHHHHHHHHHhcCCCCccHHHHHHhhhhhhccccccCchhhcCC
Confidence 99999999999999999999999999999999999999999998877777777899999876554333333333467899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CCChHHHHHHHHHH
Q 007513 479 PSAILEAFEARAIRMSVACAQNLSKFTNQEEGFAELAADLVEAAVAHCQLIVVSKFIEKLQQDIP-GKGVKPILEILCHI 557 (600)
Q Consensus 479 ~~~l~~~~~~r~~~~~~~~~~~l~~~~~~~~~~n~~~~~l~~la~a~~~~~~l~~f~~~v~~~~~-~~~~~~vL~~l~~L 557 (600)
|++++++|++|+++++..+++++++.++.+++||+++++++++|+||+++++++.|++.|++ ++ +++++.+|.+||.|
T Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~a~a~~~~~~~~~f~~~~~~-~~~~~~~~~~l~~l~~l 558 (659)
T 1w07_A 480 PDVVLEAFEARALRMAVTCAKNLSKFENQEQGFQELLADLVEAAIAHCQLIVVSKFIAKLEQ-DIGGKGVKKQLNNLCYI 558 (659)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSSSHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTTS-CCCSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChHHHHHHHHHHHH
Confidence 99999999999999999999999877777899999999999999999999999999999997 77 89999999999999
Q ss_pred HHHHHHHhhhhHHHhcCCCCHHHHHHHHHHHHHHHHhhcCc
Q 007513 558 YALHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVFTC 598 (600)
Q Consensus 558 ~aL~~i~~~~~~fl~~~~ls~~q~~~i~~~~~~l~~~lr~~ 598 (600)
|+|+.|+++++||+++||||++|++.|++.|.+||.+|||+
T Consensus 559 ~~l~~i~~~~~~~l~~~~~s~~~~~~~~~~~~~l~~~lrp~ 599 (659)
T 1w07_A 559 YALYLLHKHLGDFLSTNCITPKQASLANDQLRSLYTQVRPN 599 (659)
T ss_dssp HHHHHHHHTHHHHHHTTSSCHHHHHHHHHHHHHHHHHHGGG
T ss_pred HhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999997
No 3
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=3.3e-60 Score=527.00 Aligned_cols=472 Identities=18% Similarity=0.200 Sum_probs=369.4
Q ss_pred CChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHHHhhc--------
Q 007513 27 GSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSV-------- 93 (600)
Q Consensus 27 ~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~g~~~~~~-------- 93 (600)
.++||.++++.+++|+.++.. + . .++...........+|+.+.+.|| |+++||.+.+..
T Consensus 28 ~~~e~~~l~~~~~~~~~~~~~----p--~--~~~~~~~~~~~p~~~~~~l~e~Gl~~l~vPee~GG~g~~~~~~~~v~ee 99 (577)
T 2z1q_A 28 FDESVKEIARTTRTFVEREVL----P--L--LERMEHGELELNVPLMRKAGELGLLAIDVPEEYGGLDLPKVISTVVAEE 99 (577)
T ss_dssp CCHHHHHHHHHHHHHHHTTTH----H--H--HHHHHTTCGGGHHHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhccCc----h--h--HHhhhcccCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHH
Confidence 368899999999999976321 0 0 011100001234678999999997 688888654331
Q ss_pred -CC--c--hhhHhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCCeEEEecCC
Q 007513 94 -DE--P--AFTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSPT 168 (600)
Q Consensus 94 -~~--~--~~~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~vlntp~ 168 (600)
.. + ..+.+|.+++..+|..+||++||++|||++++|++++|+++|||++|||+.+++|+|+++++|++|+||
T Consensus 100 l~~~~s~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~l~~G~~~~a~alTEp~aGSD~~~~~t~A~~~~dG~~~vLn--- 176 (577)
T 2z1q_A 100 LSGSGGFSVTYGAHTSIGTLPLVYFGTEEQKRKYLPKLASGEWIAAYCLTEPGSGSDALAAKTRATLSEDGKHYILN--- 176 (577)
T ss_dssp HTTSCTHHHHHHHHHTTTTHHHHHHCCHHHHHTTHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEE---
T ss_pred HhhcccHHHHHhhhHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeeEEEEeCCCCEEEEE---
Confidence 11 1 224556666677899999999999999999999999999999999999999999999997778899999
Q ss_pred CCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccceeEEeccee
Q 007513 169 LTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHVR 248 (600)
Q Consensus 169 ~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fd~v~ 248 (600)
|+|+|||| +..||+++|+|+++ + .|+++|+|| .+.|||++++.++++| +++++++.|.|+||+
T Consensus 177 --G~K~~it~-a~~Ad~~~V~Ar~~--g--~gis~flVp-------~~~pGv~v~~~~~~~G---~~~~~~~~v~fddv~ 239 (577)
T 2z1q_A 177 --GVKQWISN-AGFAHLFTVFAKVD--G--EHFTAFLVE-------RDTPGLSFGPEEKKMG---IKASSTRQVILEDVK 239 (577)
T ss_dssp --EEEEEEET-TTTCSEEEEEEEET--T--TEEEEEEEE-------TTCTTEEECCCCCBSS---CTTSCEEEEEEEEEE
T ss_pred --EEeeCCCC-CCccCEEEEEEEeC--C--CeeEEEEEe-------CCCCCeEecCCCCCCC---CCCCceeEEEeccee
Confidence 99999999 88999999999974 2 589999999 7899999999999999 999999999999999
Q ss_pred cCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccchHH
Q 007513 249 IPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYKT 328 (600)
Q Consensus 249 VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~i~~~q~ 328 (600)
||.+++|+ ..|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++||.
T Consensus 240 VP~~~llg-----~~g~g~~------~~~~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg~-------pi~~~q~ 301 (577)
T 2z1q_A 240 VPVENVLG-----EIGKGHK------IAFNVLNVGRYKLGAGAVGGAKRALELSAQYATQRVQFGR-------PIGRFGL 301 (577)
T ss_dssp EEGGGEES-----CTTCTHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSSS-------BGGGSHH
T ss_pred ccHHHccC-----CCCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCC-------chhhhHH
Confidence 99999998 6666654 6677888899999999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC------hhhhHHHHhhHHHHHHHHHHHHHHHHHHHhcccc
Q 007513 329 QQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFST------LPEAHACTAGLKSLTTTATADGIEECRKLCGGHG 402 (600)
Q Consensus 329 ~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~------~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G 402 (600)
+||+|++|.+.+++++++++++++.++.... ++... ..+.+..++++|+++++.+.+++++|+|+|||+|
T Consensus 302 vq~~La~~~~~~~aar~~~~~aa~~~d~~~~----~~~~~~~~~~~~~~~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G 377 (577)
T 2z1q_A 302 IQQKLGEMASRIYAAESAVYRTVGLIDEALL----GKKGPEAVMAGIEEYAVEASIIKVLGSEVLDYVVDEGVQIHGGYG 377 (577)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TCCSHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc----ccccchhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCee
Confidence 9999999999999999999999988875321 00000 1245677899999999999999999999999999
Q ss_pred ccccCChhHHhhhhcccccccchhHHHHHHHHHHHHHHHHHhcCCCCCccccccccchh-HhhhhcCCccccCCCCCHHH
Q 007513 403 YLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGRAE-QLMQCHCGVQKAEDWLNPSA 481 (600)
Q Consensus 403 ~~~~~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~~~~~~~~~~~~~~~~~yl~~~~-~~~~~~~~~~~~~~~~~~~~ 481 (600)
|+++++++++|||++...+++|+|++++..|++.+++...+ +. .....|+.+.. .+.. +. . ...+.+...
T Consensus 378 ~~~e~~l~r~~Rda~~~~i~eGt~~i~~~~ia~~~l~~~~~---~~--l~~~~~~~~~~~~~~~-~~--~-~~~l~~~~~ 448 (577)
T 2z1q_A 378 YSQEYPIERAYRDARINRIFEGTNEINRLLIPGMLLRRALK---GQ--LPLMQAAQRLQKELLE-PS--F-EEPEDLELH 448 (577)
T ss_dssp GBTTSHHHHHHHHHGGGGTTTSCHHHHHHHTTGGGSCC------------------------------------CCHHHH
T ss_pred ecCCChHHHHHhhCcceeeeCcHHHHHHHHHHHHHHHHHhh---cC--CcHHHHHHHHHHHHcC-CC--C-ChhHHHHHH
Confidence 99999999999999999999999999999999999865432 11 11123444332 1111 00 0 123334556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHH
Q 007513 482 ILEAFEARAIRMSVACAQNLSKFTNQEEGFAELAADLVEAAVAHCQLIVVSKFIEKLQQDIPGKGVKPILEILCHIYALH 561 (600)
Q Consensus 482 l~~~~~~r~~~~~~~~~~~l~~~~~~~~~~n~~~~~l~~la~a~~~~~~l~~f~~~v~~~~~~~~~~~vL~~l~~L~aL~ 561 (600)
++..+..+....+..+..++.+... ..+..+.++|++|+++|++.+++.++++. . +. +..|.+++..+++.
T Consensus 449 ~l~~~~~~~~~~~~~~~~~~~~~l~------~~q~~l~~lad~~~~~~~~~~~l~r~~~~-~-~~-~~~l~~~~~~~~~~ 519 (577)
T 2z1q_A 449 QVQNLKKLALMVAGLAVQKYGQGVE------EEQEVLGAVADILIDAYAAESALLRARRL-G-GL-APVLARIYLAQALD 519 (577)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGGG------GCHHHHHHHHHHHHHHHHHHHHHHHHHHH-C-TT-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhc-c-Cc-HHHHHHHHHHHHHH
Confidence 6777777777776666666543211 22578999999999999999999999984 2 33 66777788888888
Q ss_pred HHHhh
Q 007513 562 LVHKH 566 (600)
Q Consensus 562 ~i~~~ 566 (600)
+|+..
T Consensus 520 ~~~~~ 524 (577)
T 2z1q_A 520 RAQAG 524 (577)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88888
No 4
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=3.9e-59 Score=518.20 Aligned_cols=503 Identities=18% Similarity=0.216 Sum_probs=378.3
Q ss_pred CChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHH-HHHHHHHHHHHHHHccC-----CHHHHHHHHhhcC------
Q 007513 27 GSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKN-TLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------ 94 (600)
Q Consensus 27 ~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~-----~~~~~g~~~~~~~------ 94 (600)
.++||.++++++++|+.++.. +. .+..+. ......++|+.+.++|| |+++||.+.+...
T Consensus 33 lt~eq~~l~~~vr~f~~~~~~-p~--------~~~~d~~~~~~~~~~~~~l~e~Gl~gl~vPee~GG~G~~~~~~~~v~E 103 (597)
T 3owa_A 33 FSSEHKMIAKTTEDFIVNEVL-PE--------LEYLEQHEFDRSVRLLKEAGELGLLGADVPEEYGGIGLDKVSSALIAE 103 (597)
T ss_dssp CCHHHHHHHHHHHHHHHHHTG-GG--------HHHHTTTCHHHHHHHHHHHHHTTTTCTTSCGGGTCCCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCc-hh--------HHHHHhcCCcCCHHHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHH
Confidence 468999999999999987432 10 011111 11345778999999997 6888887654321
Q ss_pred ---C----chhhHhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCCeEEEecC
Q 007513 95 ---E----PAFTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSP 167 (600)
Q Consensus 95 ---~----~~~~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~vlntp 167 (600)
. ..++..|..++...|..+|+++||++|||++++|+.++|+++|||++|||+.+++|+|+++++|++|+||
T Consensus 104 el~~~~~~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~la~Ge~~~a~alTEp~aGSD~~~~~T~A~~~~dG~~yvLn-- 181 (597)
T 3owa_A 104 KFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALGAKTTARLNAEGTHYVLN-- 181 (597)
T ss_dssp HHGGGTHHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEE--
T ss_pred HHHccchHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhCCCcceeeEecCCCCCCCcccceeEEEEeCCCCEEEEe--
Confidence 1 1234456556666788899999999999999999999999999999999999999999998778899999
Q ss_pred CCCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccceeEEecce
Q 007513 168 TLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHV 247 (600)
Q Consensus 168 ~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fd~v 247 (600)
|+|+||+| +..||+++|+|+++. .|+++|+|| .+.|||++.+.|+++| +++++++.|.||||
T Consensus 182 ---G~K~~is~-a~~Ad~~lV~Art~~----~g~s~flV~-------~~~pGv~v~~~~~~~G---lrgs~t~~v~fddV 243 (597)
T 3owa_A 182 ---GEKQWITN-SAFADVFIVYAKIDG----EHFSAFIVE-------KDYAGVSTSPEEKKMG---IKCSSTRTLILEDA 243 (597)
T ss_dssp ---EEEEEEET-TTTCSEEEEEEEETT----TEEEEEEEE-------TTSTTEEECCCCCBSS---CTTSCEEEEEEEEE
T ss_pred ---eEEEEeCC-CccCCEEEEEEEeCC----CceEEEEEe-------CCCCCeEEeccccccc---CCCCCceEEEEece
Confidence 99999999 899999999999742 479999999 7889999999999999 99999999999999
Q ss_pred ecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccchH
Q 007513 248 RIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYK 327 (600)
Q Consensus 248 ~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~i~~~q 327 (600)
+||.+++|+ ..|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++||
T Consensus 244 ~VP~~~lLG-----~~g~G~~------~~~~~l~~~R~~~aa~~lG~a~~al~~a~~ya~~R~qfG~-------pi~~~q 305 (597)
T 3owa_A 244 LVPKENLLG-----EIGKGHI------IAFNILNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQ-------PIARFP 305 (597)
T ss_dssp EEEGGGEES-----STTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGGSH
T ss_pred eecHHHhcC-----cccchHH------HHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCc-------cccccH
Confidence 999999998 6665554 6677889999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--CC-----CChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhcc
Q 007513 328 TQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQAN--DF-----STLPEAHACTAGLKSLTTTATADGIEECRKLCGG 400 (600)
Q Consensus 328 ~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~--~~-----~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG 400 (600)
.+|++|++|.+.+++++++++++++.+++........ +. ....+.+..++++|+++++.+.+++++|+|+|||
T Consensus 306 ~vq~~LA~m~~~~~aar~l~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~aK~~ase~a~~v~~~a~qi~GG 385 (597)
T 3owa_A 306 LIQEKLANMAAKTYAAESSVYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHGG 385 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 9999999999999999999999999887643210000 00 0001346678999999999999999999999999
Q ss_pred ccccccCChhHHhhhhcccccccchhHHHHHHHHHHHHHHHHHhcCCCCCccccccccchhHhhhhcCC-ccccCCCCCH
Q 007513 401 HGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGRAEQLMQCHCG-VQKAEDWLNP 479 (600)
Q Consensus 401 ~G~~~~~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~-~~~~~~~~~~ 479 (600)
+||+++++++++|||++...+++|+|++++..|++.+|+.+.+ +..| ++.....+.+.... .++....-.+
T Consensus 386 ~G~~~e~~ler~~RDar~~~i~eGt~ei~r~~Ia~~ll~~~~k---~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l 457 (597)
T 3owa_A 386 YGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMK---GELP-----LLQKAQKLQEELMMMMPEEVGDEPL 457 (597)
T ss_dssp GGGBTTSHHHHHHHHHGGGGTSSSCHHHHHHHHHHHHHHHHHT---TSSC-----HHHHHHHHHHHHTTC---CCCSSTT
T ss_pred ccccccChHHHHHHHhhhhheeCcHHHHHHHHHHHHHHHHHhc---CCcc-----hhHHHHHHHHHHhhcCCCccccccH
Confidence 9999999999999999999999999999999999999987643 2222 12222111111000 0110000011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-C----CCCChHHHHHHH
Q 007513 480 SAILEAFEARAIRMSVACAQNLSKFTNQEEGFAELAADLVEAAVAHCQLIVVSKFIEKLQQD-I----PGKGVKPILEIL 554 (600)
Q Consensus 480 ~~l~~~~~~r~~~~~~~~~~~l~~~~~~~~~~n~~~~~l~~la~a~~~~~~l~~f~~~v~~~-~----~~~~~~~vL~~l 554 (600)
+.-...++.. .++...+...+.. +.+..+.+.+..|.++|+.-++.|++++.+.+.+++ | +..+.+..|.++
T Consensus 458 ~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~q~~l~~~ad~~~~~y~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 534 (597)
T 3owa_A 458 ALQKYLVNNA-KKIGLMVAGLAAQ--KYGKALDKEQEILVNIADIVSNLYAMESAVLRTEKAIKTTGLEKNKQKVLYTEV 534 (597)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHHHH--HHGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSGGGHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHH--HhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccchHHHHHHHHH
Confidence 1111122211 1222222222111 134566677888999999999999999999998874 2 123456678888
Q ss_pred HHHHHHHHHHhhhhHHHhcCCCCHHHHHHHHHHH
Q 007513 555 CHIYALHLVHKHLGDFVSTGCITAKQASLANEQL 588 (600)
Q Consensus 555 ~~L~aL~~i~~~~~~fl~~~~ls~~q~~~i~~~~ 588 (600)
++.-+..+|+......+ ..+-.++..+.+...+
T Consensus 535 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 567 (597)
T 3owa_A 535 FCQEAFNEIEAHAKETL-IAVENGDMLRMMLSSL 567 (597)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HhhccchHHHHHHHHH
Confidence 88888899988755444 3344444444333333
No 5
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=100.00 E-value=2.3e-54 Score=481.21 Aligned_cols=487 Identities=17% Similarity=0.190 Sum_probs=356.7
Q ss_pred HHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHHHhhcC------------C
Q 007513 33 QVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------------E 95 (600)
Q Consensus 33 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~g~~~~~~~------------~ 95 (600)
++++.+++|+.+... + ...+.......++|+.+.+.|| |+++||.+.+... .
T Consensus 56 ~l~~~~~~~~~~~~~----~-------~~~d~~~~~p~~~~~~l~e~Gl~~l~~P~e~GG~gl~~~~~~~v~e~l~~~~~ 124 (607)
T 2uxw_A 56 ELVEPVSRFFEEVND----P-------AKNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDL 124 (607)
T ss_dssp HHHHHHHHHHHHTCC----H-------HHHHHHTSCCHHHHHHHHHTTTTCTTSCGGGTSCCCCHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHhhcC----H-------HHhccccCCCHHHHHHHHHcCCcCCCCChhhCCCCCCHHHHHHHHHHHHHccc
Confidence 388999999976421 1 1111112233578999999997 6888887644321 1
Q ss_pred c--hhhHhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCCeEEEecCCCCccc
Q 007513 96 P--AFTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSPTLTSSK 173 (600)
Q Consensus 96 ~--~~~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~vlntp~~~G~K 173 (600)
+ ..+..|..+++.+|..+|+++||++|||++++|+.++|+++|||++|||+.++.|+|+++++|++|+|| |+|
T Consensus 125 s~a~~~~~~~~~g~~~l~~~Gt~eqk~~~Lp~l~~G~~~~~~alTEp~aGSD~~~~~t~A~~~~dG~~y~Ln-----G~K 199 (607)
T 2uxw_A 125 GVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLN-----GSK 199 (607)
T ss_dssp HHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEECTTSSEEEEE-----EEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceeEEEEeCCCCEEEEE-----eEE
Confidence 1 123345445567888999999999999999999999999999999999999999999998667799999 999
Q ss_pred cccCCCCCCccEEEEEEEEccCC---C--CCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccceeEEeccee
Q 007513 174 WWPGGLGKVSTHAVVYARLITDG---Q--DHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHVR 248 (600)
Q Consensus 174 ~~i~~~a~~Ad~~lV~A~~~~~~---~--~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fd~v~ 248 (600)
+|||+ +..||+++|+|++...+ + ..|+++|+|| .+.|||++.+.++|+| +++++++.|.|+||+
T Consensus 200 ~~is~-~~~Ad~~lV~Ar~~~~~~~~g~~~~gis~flVp-------~~~~Gv~v~~~~~~~G---~rg~~t~~v~fddv~ 268 (607)
T 2uxw_A 200 LWISN-GGLADIFTVFAKTPVTDPATGAVKEKITAFVVE-------RGFGGITHGPPEKKMG---IKASNTAEVFFDGVR 268 (607)
T ss_dssp EEEET-TTTCSEEEEEEEEEEECTTTCCEEEEEEEEEEE-------GGGSSEEECCCCCCSS---CTTSCEEEEEEEEEE
T ss_pred EeecC-CcccCEEEEEEEecCCCcccCCCCCceEEEEEe-------CCCCCeEEecCccccC---CCCCCeeEEEeccEE
Confidence 99999 89999999999986421 1 3589999999 7789999999999999 999999999999999
Q ss_pred cCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccchHH
Q 007513 249 IPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYKT 328 (600)
Q Consensus 249 VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~i~~~q~ 328 (600)
||.+++|+ ..|.++. .+...+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++||.
T Consensus 269 VP~~~llG-----~~g~G~~------~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~ya~~R~qfG~-------pi~~~~~ 330 (607)
T 2uxw_A 269 VPSENVLG-----EVGSGFK------VAMHILNNGRFGMAAALAGTMRGIIAKAVDHATNRTQFGE-------KIHNFGL 330 (607)
T ss_dssp EEGGGEES-----STTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGGSHH
T ss_pred ecHHHhcC-----CCCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCC-------chhhcHH
Confidence 99999998 6666654 6677888899999999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhccccccccCC
Q 007513 329 QQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCSSG 408 (600)
Q Consensus 329 ~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G~~~~~~ 408 (600)
+|++|++|.+.+++++++++++++.++. +. ++....++++|+++++.+.+++++|+|+|||+||+++++
T Consensus 331 vq~~La~~~~~~eaaral~~~aa~~~d~-------~~----~~~~~~~~~aK~~~se~a~~v~~~a~qv~GG~G~~~e~~ 399 (607)
T 2uxw_A 331 IQEKLARMVMLQYVTESMAYMVSANMDQ-------GA----TDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPG 399 (607)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC----SCCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CC----ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCccH
Confidence 9999999999999999999999887652 11 234567899999999999999999999999999999999
Q ss_pred hhHHhhhhcccccccchhHHHHHHHHHHHHHHHHHh-----cCCCCCcccccc-----ccchhHhhhhcCCccccCCCCC
Q 007513 409 LPELFAVYVPACTYEGDNIVLLLQVARFLMKTVSQL-----GYGNMPVGTTTY-----MGRAEQLMQCHCGVQKAEDWLN 478 (600)
Q Consensus 409 l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~~~~~~-----~~~~~~~~~~~y-----l~~~~~~~~~~~~~~~~~~~~~ 478 (600)
++++|||++...+++|+|++++..|+...+....+. .+-.+|.....+ +..+......... ....+..+
T Consensus 400 l~r~~Rda~~~~i~eGt~~i~~~~ia~~glq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 478 (607)
T 2uxw_A 400 VERVLRDLRIFRIFEGTNDILRLFVALQGCMDKGKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSG-LSLSGLVH 478 (607)
T ss_dssp HHHHHHHHGGGGTSSSCHHHHHHHHHHHHHHHHHHHHHGGGCSCCCTTC--------------------CC-CCCBTTBC
T ss_pred HHHHHHhcccceeeCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhhccc-ccccccCC
Confidence 999999999999999999999999987776644421 111223221111 1111111110000 00011112
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHHHHhcCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----CCCCChHHHHH
Q 007513 479 P--SAILEAFEARAIRMSVACAQNLSKFTNQEEGFAELAADLVEAAVAHCQLIVVSKFIEKLQQD----IPGKGVKPILE 552 (600)
Q Consensus 479 ~--~~l~~~~~~r~~~~~~~~~~~l~~~~~~~~~~n~~~~~l~~la~a~~~~~~l~~f~~~v~~~----~~~~~~~~vL~ 552 (600)
+ +...+.+......+...+..-+.. .+......+..+.+++...++.|.+..-+.+.+++ .+..+....+.
T Consensus 479 ~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~rl~d~~~~~y~~~~~l~r~~~~~~~g~~~~~~~~~~a 555 (607)
T 2uxw_A 479 PELSRSGELAVRALEQFATVVEAKLIK---HKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEKMLC 555 (607)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHH---HGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHH---hCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHH
Confidence 2 222333333333222221111211 11222223455677777777777666666665542 12233446677
Q ss_pred HHHHHHHHHHHHhhhhHHHhc-CCCCHH
Q 007513 553 ILCHIYALHLVHKHLGDFVST-GCITAK 579 (600)
Q Consensus 553 ~l~~L~aL~~i~~~~~~fl~~-~~ls~~ 579 (600)
+.++-.++.+|++....+.++ ...+.+
T Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (607)
T 2uxw_A 556 DTWCIEAAARIREGMAALQSDPWQQELY 583 (607)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCChH
Confidence 888888999999999887765 554433
No 6
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=100.00 E-value=8.7e-56 Score=472.29 Aligned_cols=358 Identities=19% Similarity=0.261 Sum_probs=306.0
Q ss_pred HcCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHHHhhcC-----
Q 007513 25 WAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD----- 94 (600)
Q Consensus 25 ~~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~g~~~~~~~----- 94 (600)
+..++||.++++++++|++++.. +. ....+.......++|+.+.+.|| |+++||.+.++.+
T Consensus 27 ~~~~~e~~~l~~~~r~~~~~~~~----p~-----~~~~d~~~~~~~~~~~~l~e~Gl~~l~~P~e~GG~g~~~~~~~~v~ 97 (404)
T 2jif_A 27 QTFTDEEMMIKSSVKKFAQEQIA----PL-----VSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVI 97 (404)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHTG----GG-----HHHHHHHTCCCHHHHHHHHHTTTTSSSSCGGGTCCCCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhCc----cc-----HHHHhhcCCCCHHHHHHHHHCCCCccCCchhhCCCCCCHHHHHHHH
Confidence 45578999999999999987432 10 11112222234578999999997 6788886544321
Q ss_pred -------Cchh--hHhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCCeEEEe
Q 007513 95 -------EPAF--TDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIH 165 (600)
Q Consensus 95 -------~~~~--~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~vln 165 (600)
.+.+ +.+|..+++..|..+|+++||++|||++.+|+ ++|+++|||++|||+..++|+|+++ +|+|+||
T Consensus 98 eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~~~~g~-~~~~a~tEp~~Gsd~~~~~t~A~~~--g~g~vln 174 (404)
T 2jif_A 98 EELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEK-VGSFCLSEAGAGSDSFALKTRADKE--GDYYVLN 174 (404)
T ss_dssp HHHHTTCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHHTC-CEEEECCBTTBSSSGGGCCCEEEEE--TTEEEEE
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCC-cceEEecCCCCCCChhhceeEEEEe--CCEEEEE
Confidence 1222 23455567788999999999999999999985 7999999999999999999999998 7999999
Q ss_pred cCCCCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccceeEEec
Q 007513 166 SPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFE 245 (600)
Q Consensus 166 tp~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fd 245 (600)
|+|.||+| +..||+++|+|++..+++..|+++|+|| .+.|||++.+.|+++| +++++++.|.||
T Consensus 175 -----G~K~~is~-a~~Ad~~~v~ar~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v~fd 238 (404)
T 2jif_A 175 -----GSKMWISS-AEHAGLFLVMANVDPTIGYKGITSFLVD-------RDTPGLHIGKPENKLG---LRASSTCPLTFE 238 (404)
T ss_dssp -----EEEEEEET-TTTCSEEEEEEESCGGGGGGGEEEEEEE-------TTCTTEEECCCCCBSS---CTTSCEEEEEEE
T ss_pred -----eEEEeecC-CcccCEEEEEEEeCCCCCCCceEEEEEe-------cCCCCeEeccCccccc---CCCCceEEEEEc
Confidence 99999999 8999999999998654445689999999 7889999999999999 999999999999
Q ss_pred ceecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccc
Q 007513 246 HVRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVID 325 (600)
Q Consensus 246 ~v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~i~~ 325 (600)
||+||.+++|+ ..|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++
T Consensus 239 ~v~Vp~~~~lg-----~~g~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~-------~i~~ 300 (404)
T 2jif_A 239 NVKVPEANILG-----QIGHGYK------YAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGK-------RLFD 300 (404)
T ss_dssp EEEEEGGGEES-----STTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGG
T ss_pred cEEECHHHcCC-----CCCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCC-------cccc
Confidence 99999999998 5555543 5566788899999999999999999999999999999999 9999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhccccccc
Q 007513 326 YKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLC 405 (600)
Q Consensus 326 ~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G~~~ 405 (600)
||.+|++|++|.+.+++++++++++++.++. +. +....++++|+++++.+.++++.|+|+|||+||++
T Consensus 301 ~q~vq~~la~~~~~~~aar~~~~~aa~~~~~-------g~-----~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~G~~~ 368 (404)
T 2jif_A 301 FQGLQHQVAHVATQLEAARLLTYNAARLLEA-------GK-----PFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTK 368 (404)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CC-----ccHHHHHHHHHHHHHHHHHHHHHHHHhcCcceecC
Confidence 9999999999999999999999999887652 11 23445789999999999999999999999999999
Q ss_pred cCChhHHhhhhcccccccchhHHHHHHHHHHHHHH
Q 007513 406 SSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKT 440 (600)
Q Consensus 406 ~~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~~ 440 (600)
+++++++|||++...+++|++++++..|++.+++.
T Consensus 369 ~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~~~~ 403 (404)
T 2jif_A 369 DYPVEKYFRDAKIGTIYEGASNIQLNTIAKHIDAE 403 (404)
T ss_dssp TSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHhhccceeecCCHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999864
No 7
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=100.00 E-value=3.5e-55 Score=465.55 Aligned_cols=357 Identities=20% Similarity=0.191 Sum_probs=306.2
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHHHhhcC------
Q 007513 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------ 94 (600)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~g~~~~~~~------ 94 (600)
..++||.++++.+++|+.++.. +. ....+....+...+|+.+.+.|| |+++||.+.++..
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~----~~-----~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~e 76 (387)
T 2d29_A 6 EEGAEERQVLGPFREFLKAEVA----PG-----AAERDRTGAFPWDLVRKLAEFGVFGALVPEAYGGAGLSTRLFARMVE 76 (387)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTG----GG-----HHHHHHHCCCCHHHHHHHHTTTGGGSSSCGGGTCCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcc----hh-----HHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHH
Confidence 3468999999999999965321 00 11111111234578999999887 6788886544321
Q ss_pred ------Cchh--hHhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCCeEEEec
Q 007513 95 ------EPAF--TDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHS 166 (600)
Q Consensus 95 ------~~~~--~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~vlnt 166 (600)
.+.+ +..|..+++..|..+|+++|+++|||++++|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 77 el~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln- 153 (387)
T 2d29_A 77 AIAYYDGALALTVASHNSLATGHILLAGSEAQKEAFLPKLASGEALGAWGLTEPGSGSDAAALKTKAEKV--EGGWRLN- 153 (387)
T ss_dssp HHHHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTSSSCEEEECCBTTBSSSGGGCCCEEEEE--TTEEEEE-
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEeCCCCCCCCHhhCceEEEEe--CCEEEEE-
Confidence 1333 2345457788899999999999999999999999999999999999999999999998 7899999
Q ss_pred CCCCccccccCCCCCCccEEEEEEEEccCC----CCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccceeE
Q 007513 167 PTLTSSKWWPGGLGKVSTHAVVYARLITDG----QDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVL 242 (600)
Q Consensus 167 p~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~----~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v 242 (600)
|+|+||+| +..||+++|+|+++.++ +..|+++|+|| .+.|||++.+.|+++| +++++++.|
T Consensus 154 ----G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~g---~~~~~~~~v 218 (387)
T 2d29_A 154 ----GTKQFITQ-GSVAGVYVVMARTDPPPSPERKHQGISAFAFF-------RPERGLKVGRKEEKLG---LTASDTAQL 218 (387)
T ss_dssp ----EEEEEEET-TTTCSEEEEEEECSCCSCGGGTTTTEEEEEEE-------CCSSSEEECCCCCCSS---CTTSCEEEE
T ss_pred ----eEEeccCC-CCcCCEEEEEEEeCCccccCCCCCCeEEEEEe-------CCCCCeeccCcccccC---CCCCCeeEE
Confidence 99999999 89999999999986443 44589999999 7889999999999999 999999999
Q ss_pred EecceecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCcc
Q 007513 243 RFEHVRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQ 322 (600)
Q Consensus 243 ~fd~v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~ 322 (600)
.||||+||.+++|+ ..|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ |
T Consensus 219 ~f~~v~Vp~~~~lg-----~~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-------~ 280 (387)
T 2d29_A 219 ILEDLFVPEEALLG-----ERGKGFY------DVLRVLDGGRIGIAAMAVGLGQAALDYALAYAKGREAFGR-------P 280 (387)
T ss_dssp EEEEEEEEGGGEES-----STTBHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------E
T ss_pred EEeeEEECHHHcCC-----CCCccHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCc-------c
Confidence 99999999999998 5555543 5667788999999999999999999999999999999999 9
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhcccc
Q 007513 323 VIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHG 402 (600)
Q Consensus 323 i~~~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G 402 (600)
|++||.+||+|++|.+.+++++.+++++++.++. +. +....++++|+++++.+.++++.|+|+|||.|
T Consensus 281 i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~-------g~-----~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g 348 (387)
T 2d29_A 281 IAEFEGVSFKLAEAATELEAARLLYLKAAELKDA-------GR-----PFTLEAAQAKLFASEAAVKACDEAIQILGGYG 348 (387)
T ss_dssp GGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred hHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC-----CchHHHHHHHHHHHHHHHHHHHHHHHhcCCee
Confidence 9999999999999999999999999999887752 11 23467899999999999999999999999999
Q ss_pred ccccCChhHHhhhhcccccccchhHHHHHHHHHHHHH
Q 007513 403 YLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMK 439 (600)
Q Consensus 403 ~~~~~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~ 439 (600)
|+++++++++|||++...+++|++++++..+++.+++
T Consensus 349 ~~~~~~~~r~~Rda~~~~i~~G~~~i~~~~ia~~~l~ 385 (387)
T 2d29_A 349 YVKDYPVERYWRDARLTRIGEGTSEILKLVIARRLLE 385 (387)
T ss_dssp GSTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHhhCccccCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999886
No 8
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=6.1e-56 Score=472.24 Aligned_cols=363 Identities=22% Similarity=0.226 Sum_probs=303.1
Q ss_pred HHHHHHHHcCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHHHhh
Q 007513 18 VDEMKIVWAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSS 92 (600)
Q Consensus 18 ~~~l~~~~~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~g~~~~~ 92 (600)
+.-|++. .++||.++++++++|++++... .....+....+..++|+.+.+.|| |+++||.+.++
T Consensus 12 p~~m~~~--~~~e~~~l~~~~r~~~~~~~~~---------~~~~~d~~~~~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~ 80 (393)
T 3pfd_A 12 PSFELFQ--LPEEHIALREAIRALAEKEIAP---------YAAEVDEKARFPEEALAALNSSGFSAIHVPEEYGGQGADS 80 (393)
T ss_dssp ------------CHHHHHHHHHHHHHHHTGG---------GHHHHHHTTCCCHHHHHHHHHHTCSCTTSCGGGTCCCCCH
T ss_pred CcccCCC--CCHHHHHHHHHHHHHHHHhCch---------HHHHHhhhCCCCHHHHHHHHHCCCCCCCCChhHCCCCCCH
Confidence 3345553 3589999999999999764210 011122222234678999999987 68888876543
Q ss_pred cC------------Cchhh--HhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCC
Q 007513 93 VD------------EPAFT--DLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQ 158 (600)
Q Consensus 93 ~~------------~~~~~--~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~ 158 (600)
.. .+.++ ..| .++...|..+|+++||++|||++.+|+.++|+++|||++|||+.+++|+|+++
T Consensus 81 ~~~~~v~eela~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~-- 157 (393)
T 3pfd_A 81 VATCIVIEEVARVDCSASLIPAVN-KLGTMGLILRGSEELKKQVLPAVASGEAMASYALSEREAGSDAASMRTRAVAD-- 157 (393)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHH-HHTTHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEEE--
T ss_pred HHHHHHHHHHHhhCchHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCcccCeeEEEEc--
Confidence 21 13333 223 35566788999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecCCCCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCccc
Q 007513 159 TDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMD 238 (600)
Q Consensus 159 ~~~~vlntp~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~ 238 (600)
+|+|+|| |+|.|++| +..||+++|+|+++.+++..|+++|+|| .+.|||++.+.|+++| +++++
T Consensus 158 ~~g~~ln-----G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~ 221 (393)
T 3pfd_A 158 GDDWILN-----GSKCWITN-GGKSTWYTVMAVTDPDKGANGISAFMVH-------KDDEGFTVGPKERKLG---IKGSP 221 (393)
T ss_dssp TTEEEEE-----EEEEEEET-TTTCSEEEEEEESCGGGGGGGEEEEEEE-------TTSTTEEEEEECCBSS---CTTSC
T ss_pred CCEEEEe-----eEEEEecC-CcccCEEEEEEEeCCCCCCCceEEEEEE-------CCCCCeEecCCCCccc---CCCCC
Confidence 7899999 99999999 8999999999998765555789999999 7889999999999999 99999
Q ss_pred ceeEEecceecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCC
Q 007513 239 NGVLRFEHVRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGG 318 (600)
Q Consensus 239 ~~~v~fd~v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~ 318 (600)
++.|.||||+||.+++|+ ..|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+
T Consensus 222 ~~~v~fddv~Vp~~~~lg-----~~g~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~---- 286 (393)
T 3pfd_A 222 TTELYFENCRIPGDRIIG-----EPGTGFK------TALATLDHTRPTIGAQAVGIAQGALDAAIAYTKERKQFGR---- 286 (393)
T ss_dssp EEEEEEEEEEEEGGGEES-----STTCHHH------HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE----
T ss_pred ceEEEEccEEEcHHHcCC-----CCCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCc----
Confidence 999999999999999998 5565544 5667788899999999999999999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHh
Q 007513 319 PETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLC 398 (600)
Q Consensus 319 ~~~~i~~~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~ 398 (600)
||++||.+||+|++|.+.+++++.+++++++.+++. . .+....++++|+++++.+.++++.|+|+|
T Consensus 287 ---~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~-------~----~~~~~~~~~aK~~a~~~a~~~~~~a~q~~ 352 (393)
T 3pfd_A 287 ---PVSDNQGVQFMLADMAMKIEAARLMVYSAAARAERG-------E----GDLGFISAASKCFASDVAMEVTTDAVQLF 352 (393)
T ss_dssp ---EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------------CHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ---chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------C----cchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999887641 1 12445678999999999999999999999
Q ss_pred ccccccccCChhHHhhhhcccccccchhHHHHHHHHHHHHH
Q 007513 399 GGHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMK 439 (600)
Q Consensus 399 GG~G~~~~~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~ 439 (600)
||+||+++++++++|||++...+++|++++++..|++.+|+
T Consensus 353 Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~ll~ 393 (393)
T 3pfd_A 353 GGYGYTQDFPVERMMRDAKITQIYEGTNQIQRVVMSRALLR 393 (393)
T ss_dssp GGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHTC
T ss_pred chhhccCCChHHHHHHhhcceeeecCHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999874
No 9
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=2.8e-55 Score=464.98 Aligned_cols=355 Identities=21% Similarity=0.295 Sum_probs=305.2
Q ss_pred CChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHHHhhcC-------
Q 007513 27 GSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------- 94 (600)
Q Consensus 27 ~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~g~~~~~~~------- 94 (600)
.++||.++++.+++|+.+... + .....+....+...+|+.+.+.|| |+++||.+.++..
T Consensus 5 ~~~~~~~l~~~~~~~~~~~~~----~-----~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~ee 75 (379)
T 1ukw_A 5 LTEEQRQLQALARRFAKEVIL----P-----VAQEYDEKEEVPWPVIEKLHEVGLLNAIIPEEYGGMGLKMLDEVIVGEE 75 (379)
T ss_dssp CCHHHHHHHHHHHHHHHHTTG----G-----GHHHHHHHTCCCHHHHHHHHHTTCTTTTSCGGGTSCCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCc----h-----hHHHHhhcCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHH
Confidence 468999999999999976421 1 011112222234678999999997 6788886544321
Q ss_pred -----Cchh--hHhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCCeEEEecC
Q 007513 95 -----EPAF--TDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSP 167 (600)
Q Consensus 95 -----~~~~--~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~vlntp 167 (600)
.+.+ +..| .++...|..+|+++||++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 76 l~~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln-- 150 (379)
T 1ukw_A 76 LAYACMGIYTIPMAS-DLGITPVLLAGTEEQKERFLRPLTEKPALAAFALSEPGNGSDAAALKTRAIRQ--GDHYVLN-- 150 (379)
T ss_dssp HHHHCHHHHHHHHHH-HHHHHHHHHHCCHHHHHHHHGGGTSSSCEEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEE--
T ss_pred HHHhCchHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcChhhCeEEEEEe--CCEEEEE--
Confidence 1323 2344 46778899999999999999999999999999999999999999999999998 7899999
Q ss_pred CCCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccceeEEecce
Q 007513 168 TLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHV 247 (600)
Q Consensus 168 ~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fd~v 247 (600)
|+|+||+| +..||+++|+|+++.+++..|+++|+|| .+.|||++.+.|+++| +++++++.|.||||
T Consensus 151 ---G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~g~~~flV~-------~~~~Gv~v~~~~~~~G---~~~~~~~~v~fd~v 216 (379)
T 1ukw_A 151 ---GTKMWISN-GGEAEWVVVFATVNPELRHKGVVALVVE-------RGTPGFKAIKIHGKMG---QRASGTYELVFEDV 216 (379)
T ss_dssp ---EEEEEEET-TTTEEEEEEEEESCGGGGGGGEEEEEEE-------TTCTTEEEEECCCCSS---CTTSCEEEEEEEEE
T ss_pred ---EEEecccC-CCcCCEEEEEEEcCCCCCCCceEEEEEe-------CCCCCeEecCcccccc---CCCCCeeEEEEeeE
Confidence 99999999 8999999999998654445689999999 7889999999999999 99999999999999
Q ss_pred ecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccchH
Q 007513 248 RIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYK 327 (600)
Q Consensus 248 ~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~i~~~q 327 (600)
+||.+++|+ ..|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++||
T Consensus 217 ~Vp~~~~lg-----~~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~~~~ya~~R~~fg~-------~i~~~q 278 (379)
T 1ukw_A 217 KVPVENRLG-----EEGEGFK------IAMQTLNKTRIPVAAGSVGVARRALDEARKYAKEREAFGE-------PIANFQ 278 (379)
T ss_dssp EEEGGGEES-----CTTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSS-------BGGGSH
T ss_pred EecHHhcCC-----CCCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCc-------chhhhH
Confidence 999999998 5555443 5566778899999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhccccccccC
Q 007513 328 TQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCSS 407 (600)
Q Consensus 328 ~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G~~~~~ 407 (600)
.+||+|++|.+.+++++.+++++++.++. +. +....++++|+++++.+.++++.|+|+|||+||++++
T Consensus 279 ~vq~~la~~~~~~~aar~~~~~aa~~~d~-------g~-----~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~ 346 (379)
T 1ukw_A 279 AIQFKLVDMLIGIETARMYTYYAAWLADQ-------GL-----PHAHASAIAKAYASEIAFEAANQAIQIHGGYGYVREF 346 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC-----chHHHHHHHHHHHHHHHHHHHHHHHHhhCCeecCCCC
Confidence 99999999999999999999999988763 11 2345689999999999999999999999999999999
Q ss_pred ChhHHhhhhcccccccchhHHHHHHHHHHHHH
Q 007513 408 GLPELFAVYVPACTYEGDNIVLLLQVARFLMK 439 (600)
Q Consensus 408 ~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~ 439 (600)
+++++|||++...+++|++++++..|++.+|+
T Consensus 347 ~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 378 (379)
T 1ukw_A 347 PVEKLLRDVKLNQIYEGTNEIQRLIIARHILA 378 (379)
T ss_dssp SHHHHHHHHHGGGTTTSCHHHHHHHHHHHHHC
T ss_pred hHHHHHHHhcCceecCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999998874
No 10
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=4.9e-55 Score=463.87 Aligned_cols=357 Identities=20% Similarity=0.191 Sum_probs=306.7
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHH---HhhcC---
Q 007513 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASML---RSSVD--- 94 (600)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~g~~---~~~~~--- 94 (600)
..++||.++++.+++|+.++.... ....+........+|+.+.+.|| |+++||.+ .++..
T Consensus 4 ~~~~~~~~l~~~~~~~~~~~~~~~---------~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~ 74 (383)
T 1buc_A 4 NLTDIQQDFLKLAHDFGEKKLAPT---------VTERDHKGIYDKELIDELLSLGITGAYFEEKYGGSGDDGGDVLSYIL 74 (383)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTTT---------HHHHHHHTCCCHHHHHHHHTTSGGGTTSCGGGTCGGGGTCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCchh---------HHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCCCCHHHHHH
Confidence 346899999999999997642210 01112222234568999998886 68888877 54422
Q ss_pred ---------Cchh--hHhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCCeEE
Q 007513 95 ---------EPAF--TDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFV 163 (600)
Q Consensus 95 ---------~~~~--~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~v 163 (600)
.+.+ +.+|..+++..|..+|+++||++|||++.+|+.++|+++|||++|||+..++|+|++++ +|+|+
T Consensus 75 v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~-~~g~~ 153 (383)
T 1buc_A 75 AVEELAKYDAGVAITLSATVSLCANPIWQFGTEAQKEKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIATKND-DGTYT 153 (383)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHTHHHHHHHCCHHHHHHTHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEECT-TSCEE
T ss_pred HHHHHHhhChHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEeCCCCCCCChhhCEeEEEEcC-CCEEE
Confidence 1223 34455577888999999999999999999999999999999999999999999999874 57899
Q ss_pred EecCCCCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccceeEE
Q 007513 164 IHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLR 243 (600)
Q Consensus 164 lntp~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~ 243 (600)
|| |+|.||+| +..||+++|+|+++.+++..|+++|+|| .+.|||++.+.|+++| +++++++.|.
T Consensus 154 ln-----G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~g~~~flV~-------~~~~Gv~v~~~~~~~g---~~~~~~~~v~ 217 (383)
T 1buc_A 154 LN-----GSKIFITN-GGAADIYIVFAMTDKSKGNHGITAFILE-------DGTPGFTYGKKEDKMG---IHTSQTMELV 217 (383)
T ss_dssp EE-----EEEEEEET-TTTCSEEEEEEESCSSSSTTSEEEEEEE-------TTCTTEEEEEECCCSS---CTTSCEEEEE
T ss_pred EE-----EEEeccCC-CCcCCEEEEEEEeCCCCCCCceEEEEEE-------CCCCCeEecCcccccc---ccCCceeEEE
Confidence 99 99999999 8999999999998655455689999999 7789999999999999 9999999999
Q ss_pred ecceecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccc
Q 007513 244 FEHVRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQV 323 (600)
Q Consensus 244 fd~v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~i 323 (600)
||||+||.+++|+ ..|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||
T Consensus 218 f~~v~Vp~~~~lg-----~~g~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~~~~ya~~R~~fG~-------~i 279 (383)
T 1buc_A 218 FQDVKVPAENMLG-----EEGKGFK------IAMMTLDGGRIGVAAQALGIAEAALADAVEYSKQRVQFGK-------PL 279 (383)
T ss_dssp EEEEEECGGGEES-----CTTBHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EG
T ss_pred EccEEeCHHHcCC-----CCCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCc-------ch
Confidence 9999999999998 5565543 5566788899999999999999999999999999999999 99
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhccccc
Q 007513 324 IDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGY 403 (600)
Q Consensus 324 ~~~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G~ 403 (600)
++||.+|++|++|.+.+++++.+++++++.++. +. +....++++|+++++.+.++++.|+|+|||+||
T Consensus 280 ~~~q~vq~~la~~~~~~~~ar~~~~~aa~~~~~-------g~-----~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~ 347 (383)
T 1buc_A 280 CKFQSISFKLADMKMQIEAARNLVYKAACKKQE-------GK-----PFTVDAAIAKRVASDVAMRVTTEAVQIFGGYGY 347 (383)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGG
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC-----chHHHHHHHHHHHHHHHHHHHHHHHHhcCCeec
Confidence 999999999999999999999999999988763 11 245668999999999999999999999999999
Q ss_pred cccCChhHHhhhhcccccccchhHHHHHHHHHHHH
Q 007513 404 LCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLM 438 (600)
Q Consensus 404 ~~~~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll 438 (600)
+++++++++|||++...+++|++++++..|++.++
T Consensus 348 ~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l 382 (383)
T 1buc_A 348 SEEYPVARHMRDAKITQIYEGTNEVQLMVTGGALL 382 (383)
T ss_dssp STTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHT
T ss_pred CCCChHHHHHHHhhcccccCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999876
No 11
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=100.00 E-value=5.5e-55 Score=464.57 Aligned_cols=360 Identities=21% Similarity=0.255 Sum_probs=308.3
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHHHhhcC------
Q 007513 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------ 94 (600)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~g~~~~~~~------ 94 (600)
..++||.++++++++|+.+..... ....+........+|+.+.+.|| |+++||.+.++..
T Consensus 5 ~~~~~~~~l~~~~r~~~~~~~~~~---------~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~e 75 (391)
T 2vig_A 5 ELPETHQMLLQTCRDFAEKELFPI---------AAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAME 75 (391)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTTTT---------HHHHHHHTCCCHHHHHHHHHHTTTSTTSCGGGTSCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCccc---------HHHHHhcCCCCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHH
Confidence 346899999999999997532100 01112222234568999999887 6788886644321
Q ss_pred ------Cch--hhHhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCCeEEEec
Q 007513 95 ------EPA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHS 166 (600)
Q Consensus 95 ------~~~--~~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~vlnt 166 (600)
.+. .+..|..++...|..+|+++|+++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 76 el~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln- 152 (391)
T 2vig_A 76 EISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAE--GDSWVLN- 152 (391)
T ss_dssp HHHHHCHHHHHHHHHHHHTTHHHHHHHCCHHHHHHHTGGGSSSSCCEEEECCBTTBSSSGGGCCCEEEEE--TTEEEEE-
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCCCcccceeEEEEe--CCEEEEe-
Confidence 111 23445447788899999999999999999999999999999999999999999999998 7899999
Q ss_pred CCCCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccceeEEecc
Q 007513 167 PTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEH 246 (600)
Q Consensus 167 p~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fd~ 246 (600)
|+|.||+| +..||+++|+|+++.+++..|+++|+|| .+.|||++.+.|+++| +++++++.|.|||
T Consensus 153 ----G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~g---~r~~~~~~v~fd~ 217 (391)
T 2vig_A 153 ----GTKAWITN-AWEASAAVVFASTDRALQNKSISAFLVP-------MPTPGLTLGKKEDKLG---IRGSSTANLIFED 217 (391)
T ss_dssp ----EEEEEEET-TTTCSEEEEEEECCSSSTTSCEEEEEEE-------SSCTTEEECCCCCBSS---CTTSCEEEEEEEE
T ss_pred ----eEEEeecC-CCcCCEEEEEEEeCCCCCCCceEEEEEe-------CCCCCeEecCcccccc---CCCCCeeEEEECc
Confidence 99999999 8999999999998644345689999999 7789999999999999 9999999999999
Q ss_pred eecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccch
Q 007513 247 VRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDY 326 (600)
Q Consensus 247 v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~i~~~ 326 (600)
|+||.+++|+ ..|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++|
T Consensus 218 v~Vp~~~~lg-----~~g~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-------~i~~~ 279 (391)
T 2vig_A 218 CRIPKDSILG-----EPGMGFK------IAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGA-------PLTKL 279 (391)
T ss_dssp EEEEGGGEES-----STTBHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGGS
T ss_pred EEECHHHcCC-----CCCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCC-------cchhh
Confidence 9999999998 5565554 5667788899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhcccccccc
Q 007513 327 KTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCS 406 (600)
Q Consensus 327 q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G~~~~ 406 (600)
|.+||+|++|.+.+++++++++++++.++. +. .....++++|+++++.+.++++.|+|+|||.||+++
T Consensus 280 q~v~~~la~~~~~~~aar~~~~~aa~~~~~-------g~-----~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~ 347 (391)
T 2vig_A 280 QVIQFKLADMALALESARLLTWRAAMLKDN-------KK-----PFIKEAAMAKLAASEAATAISHQAIQILGGMGYVTE 347 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC-----CchHHHHHHHHHHHHHHHHHHHHHHHhhCCeEecCC
Confidence 999999999999999999999999887752 11 134568999999999999999999999999999999
Q ss_pred CChhHHhhhhcccccccchhHHHHHHHHHHHHHHHH
Q 007513 407 SGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTVS 442 (600)
Q Consensus 407 ~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~~~~ 442 (600)
++++++|||++...+++|++++++..+++.+++.++
T Consensus 348 ~~~~r~~Rda~~~~i~~G~~~~~~~~ia~~~l~~~~ 383 (391)
T 2vig_A 348 MPAERHYRDARITEIYEGTSEIQRLVIAGHLLRSYR 383 (391)
T ss_dssp SSHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHhhcceeecCHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999998764
No 12
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=3.3e-55 Score=466.77 Aligned_cols=359 Identities=18% Similarity=0.238 Sum_probs=305.7
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHH--HHHHHHHHccC-----CHHHHHHHHhhcC----
Q 007513 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAA--YAWKRIIELRL-----SEEEASMLRSSVD---- 94 (600)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~-----~~~~~g~~~~~~~---- 94 (600)
..++||.++++++++|+.++.... ....+....... ++|+.+.+.|| |+++||.+.++..
T Consensus 12 ~~~~e~~~l~~~~r~~~~~~~~~~---------~~~~d~~~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v 82 (394)
T 1ivh_A 12 GLSEEQRQLRQTMAKFLQEHLAPK---------AQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLV 82 (394)
T ss_dssp TCCHHHHHHHHHHHHHHHHHTTTT---------HHHHHHHTCCTTHHHHHHHHHHHTCTTTTSCGGGTCCCCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCChh---------HHHHHhcCCCCchHHHHHHHHHCCCCCCCCCcccCCCCCCHHHHHHH
Confidence 457899999999999997632210 111111111223 78999999887 6788886544321
Q ss_pred --------Cchh--hHhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCCeEEE
Q 007513 95 --------EPAF--TDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVI 164 (600)
Q Consensus 95 --------~~~~--~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~vl 164 (600)
.+.+ +.+|..+++..|..+|+++||++|||++.+|+.++|+++|||++|||+..++|+|+++ +|+|+|
T Consensus 83 ~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~~l 160 (394)
T 1ivh_A 83 MEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKK--GNHYIL 160 (394)
T ss_dssp HHHHHHHCHHHHHHHHHHHTTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEEC--SSEEEE
T ss_pred HHHHHhhchhHHHHHHHhhHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCcCcccceEEEEEc--CCEEEE
Confidence 1222 3445457788999999999999999999999999999999999999999999999998 789999
Q ss_pred ecCCCCccccccCCCCCCccEEEEEEEEccC--CCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccceeE
Q 007513 165 HSPTLTSSKWWPGGLGKVSTHAVVYARLITD--GQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVL 242 (600)
Q Consensus 165 ntp~~~G~K~~i~~~a~~Ad~~lV~A~~~~~--~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v 242 (600)
| |+|+||+| +..||+++|+|+++.+ ++..|+++|+|| .+.|||++.+.|+++| +++++++.|
T Consensus 161 n-----G~K~~vs~-~~~Ad~~~v~ar~~~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v 224 (394)
T 1ivh_A 161 N-----GNKFWITN-GPDADVLIVYAKTDLAAVPASRGITAFIVE-------KGMPGFSTSKKLDKLG---MRGSNTCEL 224 (394)
T ss_dssp E-----EEEEEEET-GGGCSEEEEEEESCTTCSSGGGGEEEEEEE-------TTCTTEEECCCCCBSS---CTTSCEEEE
T ss_pred E-----eEEEeeCC-CCcCCEEEEEEEeCCcccCCCCCeEEEEEe-------CCCCCeEecccccccc---CCCCCeeEE
Confidence 9 99999999 8999999999998644 234689999999 7889999999999999 999999999
Q ss_pred EecceecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCcc
Q 007513 243 RFEHVRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQ 322 (600)
Q Consensus 243 ~fd~v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~ 322 (600)
.||||+||.+++|+ ..|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ |
T Consensus 225 ~fd~v~Vp~~~~lg-----~~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-------~ 286 (394)
T 1ivh_A 225 IFEDCKIPAANILG-----HENKGVY------VLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQ-------K 286 (394)
T ss_dssp EEEEEEEEGGGEES-----CTTCHHH------HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCEETTE-------E
T ss_pred EECcEEEcHHHcCC-----CCCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCc-------c
Confidence 99999999999998 5555443 5667778899999999999999999999999999999999 9
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhcccc
Q 007513 323 VIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHG 402 (600)
Q Consensus 323 i~~~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G 402 (600)
|++||.+||+|++|.+.+++++.+++++++.++. +. +....++++|.++++.+.++++.|+|+|||+|
T Consensus 287 i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~-------g~-----~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g 354 (394)
T 1ivh_A 287 IGHFQLMQGKMADMYTRLMACRQYVYNVAKACDE-------GH-----CTAKDCAGVILYSAECATQVALDGIQCFGGNG 354 (394)
T ss_dssp GGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CC-----cchHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 9999999999999999999999999999887752 11 23456889999999999999999999999999
Q ss_pred ccccCChhHHhhhhcccccccchhHHHHHHHHHHHHHHH
Q 007513 403 YLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTV 441 (600)
Q Consensus 403 ~~~~~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~~~ 441 (600)
|+++++++++|||++...+++|++++++..|++.+++.+
T Consensus 355 ~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~ll~~~ 393 (394)
T 1ivh_A 355 YINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGRAFNADF 393 (394)
T ss_dssp GBTTSTHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHTC-
T ss_pred ccCCchHHHHHHhcccccccCChHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999998654
No 13
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=100.00 E-value=4e-55 Score=466.37 Aligned_cols=359 Identities=21% Similarity=0.275 Sum_probs=305.5
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHHHhhcC------
Q 007513 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------ 94 (600)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~g~~~~~~~------ 94 (600)
..++||.++++.+++|+.++.. + .....+........+|+.+.+.|| |+++||.+.++..
T Consensus 15 ~~~~~~~~l~~~~r~~~~~~~~----~-----~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~e 85 (396)
T 1egd_A 15 EFTEQQKEFQATARKFAREEII----P-----VAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCGGLGLGTFDACLISE 85 (396)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTH----H-----HHHHHHHHCCCCHHHHHHHHHHTCSSTTSCGGGTSCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCc----h-----hHHHHHhhCCCCHHHHHHHHHCCCCCCCCchhhCCCCCCHHHHHHHHH
Confidence 4468999999999999965321 0 011111111233568999999887 6788886544321
Q ss_pred ------CchhhH-hhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCCeEEEecC
Q 007513 95 ------EPAFTD-LHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSP 167 (600)
Q Consensus 95 ------~~~~~~-~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~vlntp 167 (600)
.+.++. .|..++...|..+|+++||++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 86 el~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln-- 161 (396)
T 1egd_A 86 ELAYGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKK--GDEYIIN-- 161 (396)
T ss_dssp HHHHHCHHHHHHHHHHHHHTHHHHHHCCHHHHHHHHHHHHHSCCCEEEECCBTTBSSSGGGCCCEEEEC--SSEEEEE--
T ss_pred HHHhhCccHHHHHHhhhHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcchhhCeeEEEEe--CCEEEEE--
Confidence 133332 45556666788999999999999999999999999999999999999999999988 7899999
Q ss_pred CCCccccccCCCCCCccEEEEEEEEccCCCC---CceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccceeEEe
Q 007513 168 TLTSSKWWPGGLGKVSTHAVVYARLITDGQD---HGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRF 244 (600)
Q Consensus 168 ~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~---~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~f 244 (600)
|+|.||+| +..||+++|+|+++.+++. .|+++|+|| .+.|||++.+.|+++| +++++++.|.|
T Consensus 162 ---G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v~f 227 (396)
T 1egd_A 162 ---GQKMWITN-GGKANWYFLLARSDPDPKAPANKAFTGFIVE-------ADTPGIQIGRKELNMG---QRCSDTRGIVF 227 (396)
T ss_dssp ---EEEEEEET-TTTCSEEEEEEECCCCTTSCGGGTEEEEEEE-------TTCTTEEECCCCCBSS---CTTSCEEEEEE
T ss_pred ---EEEEcccC-CcccCEEEEEEEeCCCCCCCCCCCeEEEEEe-------CCCCCeeeCCcccccc---ccCCCeeEEEE
Confidence 99999999 8999999999998654333 689999999 7889999999999999 99999999999
Q ss_pred cceecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCcccc
Q 007513 245 EHVRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVI 324 (600)
Q Consensus 245 d~v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~i~ 324 (600)
|||+||.+++|+ ..|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||+
T Consensus 228 d~v~Vp~~~~lg-----~~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~-------~i~ 289 (396)
T 1egd_A 228 EDVKVPKENVLI-----GDGAGFK------VAMGAFDKERPVVAAGAVGLAQRALDEATKYALERKTFGK-------LLV 289 (396)
T ss_dssp EEEEEEGGGBSS-----STTBHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEETTE-------EGG
T ss_pred CcEEECHHHcCC-----CCCccHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCc-------chh
Confidence 999999999998 5565543 5566778899999999999999999999999999999999 999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhcccccc
Q 007513 325 DYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYL 404 (600)
Q Consensus 325 ~~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G~~ 404 (600)
+||.+||+|++|.+.+++++.+++++++.++. +. +....++++|+++++.+.++++.|+|+|||+||+
T Consensus 290 ~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~-------g~-----~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~ 357 (396)
T 1egd_A 290 EHQAISFMLAEMAMKVELARMSYQRAAWEVDS-------GR-----RNTYYASIAKAFAGDIANQLATDAVQILGGNGFN 357 (396)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TS-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTB
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC-----cchHHHHHHHHHHHHHHHHHHHHHHHHhCccccc
Confidence 99999999999999999999999999887752 11 2345688999999999999999999999999999
Q ss_pred ccCChhHHhhhhcccccccchhHHHHHHHHHHHHHHH
Q 007513 405 CSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTV 441 (600)
Q Consensus 405 ~~~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~~~ 441 (600)
++++++++|||++...+++|++++++..|++.+++.+
T Consensus 358 ~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~~~ 394 (396)
T 1egd_A 358 TEYPVEKLMRDAKIYQIYGGTSQIQRLIVAREHIDKY 394 (396)
T ss_dssp TTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHTT
T ss_pred CCChHHHHHHHhhCeeecCCHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999998754
No 14
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=100.00 E-value=6.2e-55 Score=465.86 Aligned_cols=354 Identities=18% Similarity=0.211 Sum_probs=305.9
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHHHhhcC------
Q 007513 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------ 94 (600)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~g~~~~~~~------ 94 (600)
..++||.++++.+++|+.++.... ....+....+..++|+.+.+.|| |+++||.+.++.+
T Consensus 28 ~~~~e~~~l~~~~r~~~~~~~~~~---------~~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~e 98 (403)
T 3r7k_A 28 WTTPERRALSQMARSFVEREIAPK---------LAEWEHVGEIPRDLHLNAAEVGLLGIGFPEEVGGSGGNAIDSALVTE 98 (403)
T ss_dssp GGCHHHHHHHHHHHHHHHHHTTTT---------HHHHHHHTSCCTHHHHHHHHHTCTTBTSCGGGTCCBCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCChh---------HHHHHhcCCCCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHH
Confidence 346899999999999998642210 11122222234678999999997 6888887644321
Q ss_pred ------Cc-h--hhHhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCCeEEEe
Q 007513 95 ------EP-A--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIH 165 (600)
Q Consensus 95 ------~~-~--~~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~vln 165 (600)
.+ . ++.+|..+++..|..+|+++||++|||++++|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 99 ela~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln 176 (403)
T 3r7k_A 99 AILAAGGSTGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGSLGVTEPGAGSDVANLRTRAVRE--GDTYVVN 176 (403)
T ss_dssp HHHHTTCCHHHHHHHCTHHHHSHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEEC--SSEEEEE
T ss_pred HHHhcCCchHHHHHHHHhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEecCCCCCCChhhceEEEEEE--CCEEEEE
Confidence 12 2 34445567778899999999999999999999999999999999999999999999998 7899999
Q ss_pred cCCCCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccceeEEec
Q 007513 166 SPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFE 245 (600)
Q Consensus 166 tp~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fd 245 (600)
|+|.||+| +..||+++|+|+++.+ +..|+++|+|| .+.|||++.+.|+++| +++++++.|.||
T Consensus 177 -----G~K~~vs~-a~~Ad~~~v~a~~~~~-~~~g~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v~fd 239 (403)
T 3r7k_A 177 -----GAKTFITS-GVRADFVTTAVRTGGP-GYGGVSLLVID-------KNSPGFEVSRRLDKMG---WRCSDTAELSFV 239 (403)
T ss_dssp -----EEEEEEET-TTTCSEEEEEEECSSS-SGGGEEEEEEE-------TTCTTEEEEEECCBSS---CTTSCEEEEEEE
T ss_pred -----EEEEcccC-CccCCEEEEEEEcCCC-CCCceEEEEEe-------CCCCCeEecCcccccC---CCCCCceEEEEe
Confidence 99999999 8999999999998654 45689999999 7889999999999999 999999999999
Q ss_pred ceecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccc
Q 007513 246 HVRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVID 325 (600)
Q Consensus 246 ~v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~i~~ 325 (600)
||+||.+++|+ ..|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++
T Consensus 240 ~v~Vp~~~~lg-----~~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-------~i~~ 301 (403)
T 3r7k_A 240 DVRVPADNLVG-----AENSGFL------QIMQQFQAERLGIAVQAYATAGRALDLAKSWARERETFGR-------PLTG 301 (403)
T ss_dssp EEEEEGGGEES-----STTCHHH------HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGG
T ss_pred eEEECHHHcCC-----CCCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCCC-------chhh
Confidence 99999999998 5555444 5667788999999999999999999999999999999999 9999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhccccccc
Q 007513 326 YKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLC 405 (600)
Q Consensus 326 ~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G~~~ 405 (600)
||.+||+|++|.+.+++++++++++++.+++ +. +....++++|+++++.+.++++.|+|+|||+||++
T Consensus 302 ~q~vq~~la~~~~~~~aar~~~~~aa~~~d~-------~~-----~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~G~~~ 369 (403)
T 3r7k_A 302 RQIIRHKLAEMARQVDVACTYTRAVMQRWLA-------GE-----DVVAEVSMAKNTAVYACDYVVNEAVQIFGGMGYMR 369 (403)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CC-----CcHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEecC
Confidence 9999999999999999999999999988763 11 23456889999999999999999999999999999
Q ss_pred cCChhHHhhhhcccccccchhHHHHHHHHHHH
Q 007513 406 SSGLPELFAVYVPACTYEGDNIVLLLQVARFL 437 (600)
Q Consensus 406 ~~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~l 437 (600)
+++++++|||++...+++|++++++..|++.+
T Consensus 370 ~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l 401 (403)
T 3r7k_A 370 ESEIERHYRDCRILGIGGGTNEIMNEVIAKRI 401 (403)
T ss_dssp TSHHHHHHHHHTTTTTTTSCHHHHHHHHHHHH
T ss_pred CchHHHHHHHhCcceeecCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999876
No 15
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=6.3e-55 Score=461.13 Aligned_cols=351 Identities=21% Similarity=0.241 Sum_probs=301.2
Q ss_pred CChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHHHhhcC-------
Q 007513 27 GSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------- 94 (600)
Q Consensus 27 ~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~g~~~~~~~------- 94 (600)
.++||.++++.+++|+.+... + .....+.......++|+.+.+.|| |+++||.+.++..
T Consensus 3 ~~~e~~~l~~~~r~~~~~~~~----~-----~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~ee 73 (372)
T 2dvl_A 3 LTQEQRLVLDAVRRVAREVLY----P-----LAPEYDRKAEYPWPQLKALAELGLLGMTTPEEWGGVGLDSVTWALALEE 73 (372)
T ss_dssp CCHHHHHHHHHHHHHHHHTHH----H-----HHHHHHHTTCCCHHHHHHHHHTTGGGTTSCGGGTSCCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCc----h-----hHHHHHhhCCCCHHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHH
Confidence 468999999999999975321 0 011111111233568999999886 6788886544321
Q ss_pred -----Cch--hhHhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCCeEEEecC
Q 007513 95 -----EPA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSP 167 (600)
Q Consensus 95 -----~~~--~~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~vlntp 167 (600)
.+. .+.+|..+++..|..+|+++||++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 74 l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln-- 149 (372)
T 2dvl_A 74 LAAADPSVAVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLARGEWIGAFCLTEPQAGSDAKSLRAEARRV--KGGFVLN-- 149 (372)
T ss_dssp HHHHCHHHHHHHHHHTSHHHHHHHHHCCHHHHHHTHHHHHTTSSCEEEECCCSSCSSCGGGCCCEEEEE--TTEEEEE--
T ss_pred HHhcCcHHHHHHHHhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCChhhCeeEEEEE--CCEEEEE--
Confidence 122 23344346778899999999999999999999999999999999999999999999998 7899999
Q ss_pred CCCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccceeEEecce
Q 007513 168 TLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHV 247 (600)
Q Consensus 168 ~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fd~v 247 (600)
|+|.||+| +..||+++|+|+++. |+++|+|| .+.|||++.+.|+++| +++++++.|.||||
T Consensus 150 ---G~K~~~s~-~~~Ad~~~v~a~~~~-----g~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v~fd~v 210 (372)
T 2dvl_A 150 ---GVKSWITS-AGHAHLYVVMARTEK-----GISAFLVE-------KGTPGLSFGRPEEKMG---LHAAHTAEVRLEEV 210 (372)
T ss_dssp ---EEEEEEET-TTTCSEEEEEEEETT-----EEEEEEEE-------TTCTTEEECCCCCCSS---CTTSCEEEEEEEEE
T ss_pred ---eEEEeecC-CCcCCEEEEEEEeCC-----CcEEEEEe-------CCCCCeEecCcccccc---cCcCCeeEEEECcE
Confidence 99999999 899999999999742 78999999 7889999999999999 99999999999999
Q ss_pred ecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccchH
Q 007513 248 RIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYK 327 (600)
Q Consensus 248 ~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~i~~~q 327 (600)
+||.+++|+ ..|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++||
T Consensus 211 ~Vp~~~~lg-----~~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-------~i~~~q 272 (372)
T 2dvl_A 211 FVPEENLLG-----EEGRGLA------YALAGLDSGRVGVAAQAVGIARGAFEIAKAYAEEREQFGK-------KLKEHQ 272 (372)
T ss_dssp EEEGGGEES-----STTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGGSH
T ss_pred EeCHHHcCC-----CCCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCC-------chhhhH
Confidence 999999998 5555543 5667788899999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhccccccccC
Q 007513 328 TQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCSS 407 (600)
Q Consensus 328 ~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G~~~~~ 407 (600)
.+||+|++|.+.+++++.+++++++.++. +. +....++++|+++++.+.++++.|+|+|||+||++++
T Consensus 273 ~vq~~la~~~~~~~aar~~~~~aa~~~~~-------g~-----~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~ 340 (372)
T 2dvl_A 273 AIAFKIADMHVKIAAARALVLEAARKKDR-------GE-----RFTLEASAAKLFASAAAVEVTREAVQVLGGYGYHRDY 340 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC-----chHHHHHHHHHHHHHHHHHHHHHHHHhhcCeecCCCC
Confidence 99999999999999999999999887652 11 2345689999999999999999999999999999999
Q ss_pred ChhHHhhhhcccccccchhHHHHHHHHHHHHH
Q 007513 408 GLPELFAVYVPACTYEGDNIVLLLQVARFLMK 439 (600)
Q Consensus 408 ~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~ 439 (600)
+++++|||++...+++|++++++..|++.+++
T Consensus 341 ~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 372 (372)
T 2dvl_A 341 RVERYYRDAKVTEIYEGTSEIQRLVIARELYR 372 (372)
T ss_dssp SHHHHHHHHHGGGTTTSCHHHHHHHHHHHHHC
T ss_pred cHHHHHHHhhcceecCCHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999998863
No 16
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=100.00 E-value=9.6e-55 Score=464.37 Aligned_cols=362 Identities=20% Similarity=0.220 Sum_probs=308.3
Q ss_pred CHHHHHHHHcCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHHHh
Q 007513 17 DVDEMKIVWAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRS 91 (600)
Q Consensus 17 ~~~~l~~~~~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~g~~~~ 91 (600)
++.-|++ ..++||.++++.+++|+.++.... ....+.......++|+.+.+.|| |+++||.+.+
T Consensus 18 ~~~~M~~--~~~~e~~~l~~~~r~~~~~~~~~~---------~~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~ 86 (403)
T 3p4t_A 18 GPGSMSI--WTTAEREALRKTVRAFAEREVLPH---------AHEWERAGEIPRELHRKAAELGLLGAGFPEDAGGSGGD 86 (403)
T ss_dssp -----CT--TSSHHHHHHHHHHHHHHHHHTTTT---------HHHHHHHTSCCHHHHHHHHHTTCTTBTSCGGGTCCBCC
T ss_pred CCCCCCC--CCCHHHHHHHHHHHHHHHHhCchh---------HHHHhhcCCCCHHHHHHHHHCCCCcCCCChhhCCCCCC
Confidence 3444544 446899999999999997643210 11122222344678999999997 6888887654
Q ss_pred hc------------CCch---hhHhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEe
Q 007513 92 SV------------DEPA---FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFD 156 (600)
Q Consensus 92 ~~------------~~~~---~~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d 156 (600)
+. +.+. ++.+|..+++..|..+|+++||++|||++++|+.++|+++|||++|||+.+++|+|+++
T Consensus 87 ~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~ 166 (403)
T 3p4t_A 87 GADPVVICEEMHYAGSPGGVYASLFTCGIAVPHMIASGDQRLIDTYVRPTLRGEKIGALAITEPGGGSDVGHLRTRADLD 166 (403)
T ss_dssp THHHHHHHHHHHHTTCCHHHHHHHSTHHHHSHHHHHHTCHHHHHHTHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEE
T ss_pred HHHHHHHHHHHHHhCCchhhhHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceEEEEEe
Confidence 32 2233 34456557778899999999999999999999999999999999999999999999998
Q ss_pred CCCCeEEEecCCCCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCc
Q 007513 157 PQTDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNT 236 (600)
Q Consensus 157 ~~~~~~vlntp~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~ 236 (600)
+|+|+|| |+|.||+| +..||+++|+|+++.+ +..|+++|+|| .+.|||++.+.|+++| +++
T Consensus 167 --~~g~~ln-----G~K~~vs~-a~~Ad~~~v~a~~~~~-~~~g~~~flV~-------~~~pGv~v~~~~~~~G---~~~ 227 (403)
T 3p4t_A 167 --GDHYVIN-----GAKTYITS-GVRADYVVTAARTGGP-GAGGVSLIVVD-------KGTPGFEVTRKLDKMG---WRS 227 (403)
T ss_dssp --TTEEEEE-----EEEEEEET-TTTCSEEEEEEECSSS-SGGGEEEEEEE-------TTCTTEEEEEECCBSS---CTT
T ss_pred --CCEEEEE-----EEEEEecC-CcccCEEEEEEEeCCC-CCCceEEEEEe-------CCCCCeEecCCCCccc---CCC
Confidence 8899999 99999999 8999999999998654 45689999999 7889999999999999 999
Q ss_pred ccceeEEecceecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCC
Q 007513 237 MDNGVLRFEHVRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKN 316 (600)
Q Consensus 237 ~~~~~v~fd~v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~ 316 (600)
++++.|.||||+||.+++|+ ..|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+
T Consensus 228 ~~~~~v~fddv~Vp~~~~lg-----~~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~-- 294 (403)
T 3p4t_A 228 SDTAELSYTDVRVPVANLVG-----SENTGFA------QIAAAFVAERVGLATQAYAGAQRCLDLTVEWCRNRDTFGR-- 294 (403)
T ss_dssp SCEEEEEEEEEEEEGGGEES-----STTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE--
T ss_pred CCeeEEEEcceEecHHHcCC-----CCCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCC--
Confidence 99999999999999999998 5555544 5667788999999999999999999999999999999999
Q ss_pred CCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHH
Q 007513 317 GGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRK 396 (600)
Q Consensus 317 ~~~~~~i~~~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q 396 (600)
||++||.+|++|++|.+.+++++++++++++.++. ++ ......++++|+++++.+.++++.|+|
T Consensus 295 -----pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~-------~~----~~~~~~~~~aK~~a~~~a~~v~~~a~q 358 (403)
T 3p4t_A 295 -----PLISRQAVQNTLAGMARRIDVARVYTRHVVERQLA-------GE----TNLIAEVCFAKNTAVEAGEWVANQAVQ 358 (403)
T ss_dssp -----EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC----CCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CC----CCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888762 11 112566889999999999999999999
Q ss_pred HhccccccccCChhHHhhhhcccccccchhHHHHHHHHHHH
Q 007513 397 LCGGHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFL 437 (600)
Q Consensus 397 ~~GG~G~~~~~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~l 437 (600)
+|||+||+++++++++|||++...+++|++++++..|++.+
T Consensus 359 ~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l 399 (403)
T 3p4t_A 359 LFGGMGYMAESEVERQYRDMRILGIGGGTTEILTSLAAKTL 399 (403)
T ss_dssp HHGGGGGBTTSHHHHHHHHHTTTTTTTSCHHHHHHHHHHHH
T ss_pred hhChhhccCCCcHHHHHHHhhcceeccCHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999987
No 17
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=100.00 E-value=2.2e-54 Score=459.13 Aligned_cols=355 Identities=22% Similarity=0.260 Sum_probs=304.7
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHHHhh--------
Q 007513 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSS-------- 92 (600)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~g~~~~~-------- 92 (600)
..++||.++++++++|+.++.... ....+........+|+.+.+.|| |+++||.+.++
T Consensus 9 ~~~~~~~~l~~~~~~~~~~~~~~~---------~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~e 79 (385)
T 2pg0_A 9 YLREEHHMFRAAFRKFLEKEAYPH---------YNDWEKRGIIPRSFWAKMGENGFLCPWVDEKYGGLNADFAYSVVINE 79 (385)
T ss_dssp TCCHHHHHHHHHHHHHHHHHTTTT---------HHHHHHHTSCCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCchh---------HHHHHhcCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHH
Confidence 346899999999999997643210 01112222234578999999997 67888765433
Q ss_pred ----cC-CchhhHhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCCeEEEecC
Q 007513 93 ----VD-EPAFTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSP 167 (600)
Q Consensus 93 ----~~-~~~~~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~vlntp 167 (600)
.+ .+.++.+|..+++..|..+|+++|+++|||++++|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 80 ela~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln-- 155 (385)
T 2pg0_A 80 ELEKVGSSLVGIGLHNDIVTPYIASYGTEEQKQKWLPKCVTGELITAIAMTEPGAGSDLANISTTAVKD--GDYYIVN-- 155 (385)
T ss_dssp HHHHHCGGGHHHHHHHHTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEE--
T ss_pred HHHhhCCchHHHHHHhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCCCcCHhhCeEEEEEc--CCEEEEE--
Confidence 12 23334346667888899999999999999999999999999999999999999999999998 7899999
Q ss_pred CCCccccccCCCCCCccEEEEEEEEccC--CCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccceeEEec
Q 007513 168 TLTSSKWWPGGLGKVSTHAVVYARLITD--GQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFE 245 (600)
Q Consensus 168 ~~~G~K~~i~~~a~~Ad~~lV~A~~~~~--~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fd 245 (600)
|+|.||+| +..||+++|+|++..+ ++..|+++|+|| .+.|||++.+.|+++| +++++++.|.||
T Consensus 156 ---G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~g---~~~~~~~~v~fd 221 (385)
T 2pg0_A 156 ---GQKTFITN-GIHADLIVVACKTDPQAKPPHRGISLLVVE-------RDTPGFTRGRKLEKVG---LHAQDTAELFFQ 221 (385)
T ss_dssp ---EEEEEETT-TTTCSEEEEEEESCTTCSSGGGGEEEEEEE-------TTCTTEEECCCCCBSS---CTTSCCEEEEEE
T ss_pred ---eEEecccC-CcccCEEEEEEEeCCccCCCCCceEEEEEe-------CCCCCeEecCCccccc---cCCCceEEEEEc
Confidence 99999999 8999999999997644 344589999999 7889999999999999 999999999999
Q ss_pred ceecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccc
Q 007513 246 HVRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVID 325 (600)
Q Consensus 246 ~v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~i~~ 325 (600)
||+||.+++|+ ..|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++
T Consensus 222 ~v~Vp~~~~lg-----~~g~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-------~i~~ 283 (385)
T 2pg0_A 222 DAKVPAYNLLG-----EEGKGFY------YLMEKLQQERLVVAIAAQTAAEVMFSLTKQYVKQRTAFGK-------RVSE 283 (385)
T ss_dssp EEEEEGGGEES-----CTTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGG
T ss_pred ceEEcHHHcCC-----CCCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCC-------ccch
Confidence 99999999998 5555543 5666778899999999999999999999999999999999 9999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhccccccc
Q 007513 326 YKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLC 405 (600)
Q Consensus 326 ~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G~~~ 405 (600)
||.+||+|++|.+.+++++.+++++++.++. + .+....++++|+++++.+.++++.|+|+|||+||++
T Consensus 284 ~q~v~~~la~~~~~~~aar~~~~~aa~~~d~-------g-----~~~~~~~~~aK~~a~e~a~~~~~~a~q~~Gg~g~~~ 351 (385)
T 2pg0_A 284 FQTVQFRLAEMATEIALGRTFVDRVIEEHMA-------G-----KQIVTEVSMAKWWITEMAKRVAAEAMQLHGGYGYME 351 (385)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------T-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------C-----CCchHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC
Confidence 9999999999999999999999999887752 1 124567899999999999999999999999999999
Q ss_pred cCChhHHhhhhcccccccchhHHHHHHHHHHH
Q 007513 406 SSGLPELFAVYVPACTYEGDNIVLLLQVARFL 437 (600)
Q Consensus 406 ~~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~l 437 (600)
+++++++|||++...+++|++++++..+++.+
T Consensus 352 ~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~l 383 (385)
T 2pg0_A 352 EYEIARRYRDIPVSAIYAGTNEMMKTIIARQL 383 (385)
T ss_dssp TSHHHHHHHHGGGGGTTTSCHHHHHHHHHHHT
T ss_pred CCcHHHHHhhhcCceeecCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999864
No 18
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=2.4e-54 Score=459.75 Aligned_cols=356 Identities=21% Similarity=0.239 Sum_probs=304.3
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHHHhhcC------
Q 007513 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------ 94 (600)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~g~~~~~~~------ 94 (600)
..++||.++++++++|+.++.. + .....+.......++|+.+.+.|| |+++||.+.++..
T Consensus 18 ~~~~e~~~~~~~~r~~~~~~~~----~-----~~~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~e 88 (393)
T 1rx0_A 18 GLNEEQKEFQKVAFDFAAREMA----P-----NMAEWDQKELFPVDVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFE 88 (393)
T ss_dssp TCCHHHHHHHHHHHHHHHHHTH----H-----HHHHHHHHTCCCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCC----c-----cHHHHhhcCCCCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHH
Confidence 4578999999999999976421 0 011112111233568999999997 6788886544321
Q ss_pred ------Cch--hhHhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCCeEEEec
Q 007513 95 ------EPA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHS 166 (600)
Q Consensus 95 ------~~~--~~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~vlnt 166 (600)
.+. .+..| .+++..|..+|+++||++|||++++|+.++|+++|||++|||+.++.|+|+++ +|+|+||
T Consensus 89 ela~~~~~~~~~~~~~-~~~~~~l~~~g~~~qk~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~~ln- 164 (393)
T 1rx0_A 89 ALATGCTSTTAYISIH-NMCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQ--GDHYILN- 164 (393)
T ss_dssp HHHTTCHHHHHHHHHH-HHHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSSGGGCCCEEEEE--TTEEEEE-
T ss_pred HHHHhCcchhHHHHHh-HHHHHHHHHHCCHHHHHHHHHHHhCCCceEEEEecCCCCCcCcccceeEEEEc--CCEEEEE-
Confidence 121 12334 36677888999999999999999999999999999999999999999999998 7899999
Q ss_pred CCCCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccceeEEecc
Q 007513 167 PTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEH 246 (600)
Q Consensus 167 p~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fd~ 246 (600)
|+|.||+| +..||+++|+|++.. ++..|+++|+|| .+.|||++.+.++++| +++.+++.|.|||
T Consensus 165 ----G~K~~is~-a~~Ad~~~v~a~~~~-~~~~g~~~flV~-------~~~pGv~v~~~~~~~g---~~~~~~~~v~fd~ 228 (393)
T 1rx0_A 165 ----GSKAFISG-AGESDIYVVMCRTGG-PGPKGISCIVVE-------KGTPGLSFGKKEKKVG---WNSQPTRAVIFED 228 (393)
T ss_dssp ----EEEEEEET-TTTCSEEEEEEESSS-SSGGGEEEEEEE-------TTCTTEEECCCCCBSS---CTTSCEEEEEEEE
T ss_pred ----eEEEeecC-CccCCEEEEEEEcCC-CCCCceEEEEEe-------CCCCCeEecCcccccc---cCCCCceEEEEcC
Confidence 99999999 899999999999753 334689999999 7889999999999999 9999999999999
Q ss_pred eecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccch
Q 007513 247 VRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDY 326 (600)
Q Consensus 247 v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~i~~~ 326 (600)
|+||.+++|+ ..|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++|
T Consensus 229 v~Vp~~~~lg-----~~g~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~-------~i~~~ 290 (393)
T 1rx0_A 229 CAVPVANRIG-----SEGQGFL------IAVRGLNGGRINIASCSLGAAHASVILTRDHLNVRKQFGE-------PLASN 290 (393)
T ss_dssp EEEEGGGEES-----STTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGGC
T ss_pred eEeCHHHcCC-----CCCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCC-------chhhh
Confidence 9999999998 5555443 5566778899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhcccccccc
Q 007513 327 KTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCS 406 (600)
Q Consensus 327 q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G~~~~ 406 (600)
|.+||+|++|.+.+++++++++++++.++. ++ .+....++++|+++++.+.++++.|+|+|||.||+++
T Consensus 291 q~vq~~la~~~~~~~aar~~~~~aa~~~d~-------~~----~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~ 359 (393)
T 1rx0_A 291 QYLQFTLADMATRLVAARLMVRNAAVALQE-------ER----KDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKD 359 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC----TTHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC----cchhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecCC
Confidence 999999999999999999999999887752 11 2346678999999999999999999999999999999
Q ss_pred CChhHHhhhhcccccccchhHHHHHHHHHHHHH
Q 007513 407 SGLPELFAVYVPACTYEGDNIVLLLQVARFLMK 439 (600)
Q Consensus 407 ~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~ 439 (600)
++++++|||++...+++|++++++..|++.+|+
T Consensus 360 ~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 392 (393)
T 1rx0_A 360 YAVQQYVRDSRVHQILEGSNEVMRILISRSLLQ 392 (393)
T ss_dssp STHHHHHHHHHHTTTSSSCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHhccCceecCChHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999875
No 19
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=3.9e-54 Score=461.64 Aligned_cols=362 Identities=18% Similarity=0.218 Sum_probs=305.0
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHH------------------HHHHHHHHHHHHccC-----C
Q 007513 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTL------------------RKAAYAWKRIIELRL-----S 82 (600)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~g~-----~ 82 (600)
..++||.++++++++|+.++.. + ......... ....++|+.+.+.|| |
T Consensus 8 ~~~~~~~~l~~~~r~~~~~~~~----p-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~G~~~~~~P 78 (415)
T 4hr3_A 8 APSARAAELIAAVREFIDAEVM----P-----VERAVLAHHDELLGARAGTTAELWHVPPELDSLKAKARAAGLWNLFLP 78 (415)
T ss_dssp CCCHHHHHHHHHHHHHHHHTHH----H-----HHHHHHHHHHHHHHTTCSCSGGGGSCCTHHHHHHHHHHHTTCSSTTCC
T ss_pred CCCHHHHHHHHHHHHHHHHhCC----c-----cHHHHhhhccccccccccccccccCcchhHHHHHHHHHhCCCcCcCCC
Confidence 4578999999999999987411 0 001111111 134678999999997 6
Q ss_pred HHHHHHHHhhcC---------C----chhhHhh--HhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCC-CCCCC
Q 007513 83 EEEASMLRSSVD---------E----PAFTDLH--WGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELG-HGSNV 146 (600)
Q Consensus 83 ~~~~g~~~~~~~---------~----~~~~~~~--~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~-~Gsd~ 146 (600)
+++||.+.++.+ . +.++..+ ...+...|..+|+++||++|||++++|+.++|+++|||+ +|||+
T Consensus 79 ~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~~gsd~ 158 (415)
T 4hr3_A 79 DPELGGGLSNSEYAPLAEQMGRSLFAPTVFNCNAPDSGNMEVLHRYGSQEQKEVWLEPLLEGDIRSAFCMTEPDVASSDA 158 (415)
T ss_dssp CTTTSCCCCHHHHHHHHHHHTTCSSHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHTTSCEEEEECCCTTSCTTSG
T ss_pred HHHCCCCCCHHHHHHHHHHHhcccchHHHHHHhccccchHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCch
Confidence 788887654321 1 1112111 112336788999999999999999999999999999999 99999
Q ss_pred CCCceEEEEeCCCCeEEEecCCCCccccccCCCCCC--ccEEEEEEEEccCC-CCCceEEEEEEeccCCCCCCCCCeEEe
Q 007513 147 QGLETTATFDPQTDEFVIHSPTLTSSKWWPGGLGKV--STHAVVYARLITDG-QDHGVNGFIVQLRSLEDHSPLPGITIG 223 (600)
Q Consensus 147 ~~~~ttA~~d~~~~~~vlntp~~~G~K~~i~~~a~~--Ad~~lV~A~~~~~~-~~~g~~~flV~~rd~~~~~~~pGv~v~ 223 (600)
..++|+|+++ +|+|+|| |+|.||+| +.+ ||+++|+|+++.++ +..|+++|+|| .+.|||++.
T Consensus 159 ~~~~t~A~~~--g~g~~ln-----G~K~~is~-a~~~~Ad~~~v~a~~~~~~~~~~g~~~flV~-------~~~pGv~v~ 223 (415)
T 4hr3_A 159 TNMAATAVVE--GDEVVIN-----GRKWWSTG-VGHPDCKVIIFMGLTDPNAHRYARHSMVLVP-------MDTPGITVE 223 (415)
T ss_dssp GGCCCEEEEE--TTEEEEE-----EEEEEEET-TTSTTEEEEEEEEECCTTSCTTSSEEEEEEE-------TTSTTEEEE
T ss_pred hhCeeEEEEE--CCEEEEe-----eEEeeECC-CCCCCCCEEEEEEEeCCCCCCCCceEEEEEE-------cCCCceEec
Confidence 9999999998 8999999 99999999 866 99999999986543 34689999999 788999999
Q ss_pred ecCCccCCCCcCccc--ceeEEecceecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 007513 224 DIGMKFGNGAYNTMD--NGVLRFEHVRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCI 301 (600)
Q Consensus 224 ~~~~~~G~~~~~~~~--~~~v~fd~v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~ 301 (600)
+.|+++| +++++ ++.|.||||+||.+++|+ ..|.++. .....+..+|+.+++.++|+++++++.
T Consensus 224 ~~~~~~g---~r~~~~~~~~v~fddv~Vp~~~~lg-----~~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~ 289 (415)
T 4hr3_A 224 RMLPTMG---FYDEPGGHGVVSFDNVRLPADAFIA-----GPGKGFE------IAQGRLGPGRVHHAMRLIGLAEVALEH 289 (415)
T ss_dssp EECCBTT---BCCTTTCEEEEEEEEEEEEGGGBSS-----CTTCHHH------HHHHHCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccc---cCCCCCCeeEEEEccEEECHHHcCC-----CCCchHH------HHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 99887 999999999999999998 5565544 566677889999999999999999999
Q ss_pred HHHHhhhhcccCCCCCCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHH
Q 007513 302 ATRYSAVRRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKS 381 (600)
Q Consensus 302 a~~ya~~R~qfg~~~~~~~~~i~~~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~ 381 (600)
+++|+++|+|||+ ||++||.+|++|++|.+.+++++.+++++++.+++. ...+....++++|+
T Consensus 290 a~~~a~~R~~fg~-------~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~----------~~~~~~~~~~~aK~ 352 (415)
T 4hr3_A 290 ACRRGLDRTAFGK-------PLVNLGGNRERIADARIAINQTRLLVLHAAWLLDTV----------GIMGALSAVSEIKV 352 (415)
T ss_dssp HHHHHHHCEETTE-------EGGGSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----------CGGGCHHHHHHHHH
T ss_pred HHHHHhcCccCCC-------cHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------cCCchHHHHHHHHH
Confidence 9999999999999 999999999999999999999999999999887631 01234567889999
Q ss_pred HHHHHHHHHHHHHHHHhccccccccCChhHHhhhhcccccccchhHHHHHHHHHHHHHHHH
Q 007513 382 LTTTATADGIEECRKLCGGHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTVS 442 (600)
Q Consensus 382 ~~t~~a~~~~~~~~q~~GG~G~~~~~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~~~~ 442 (600)
++++.+.++++.|+|+|||+||+++++++++|||++...+++|++++++..|++.+|+.++
T Consensus 353 ~a~e~a~~v~~~a~qi~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~l~~~~ 413 (415)
T 4hr3_A 353 AAPNMAQQVIDMAIQIHGGGGLSNDFPLAAAWVNARALRLADGPDEVHRGVVARIELAKYA 413 (415)
T ss_dssp HHHHHHHHHHHHHHHHTGGGGGSSSSSHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhCccccCCCchHHHHHHHhhhheeecCcHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999998653
No 20
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=100.00 E-value=6.8e-55 Score=464.63 Aligned_cols=355 Identities=21% Similarity=0.210 Sum_probs=298.6
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHHHhhcC------
Q 007513 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------ 94 (600)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~g~~~~~~~------ 94 (600)
..++||.++++++++|+.++.. + .....+....+..++|+.+.+.|| |+++||.+.++..
T Consensus 18 ~~~~e~~~l~~~~r~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~v~e 88 (396)
T 3ii9_A 18 QLADDERMVRDAAHAYAQGKLA----P-----RVTEAFRHETTDAAIFREMGEIGLLGPTIPEQYGGPGLDYVSYGLIAR 88 (396)
T ss_dssp GSCHHHHHHHHHHHHHCCCCCH----H-----HHHHHHHHTCCCTHHHHHHHHTTCSSTTSCGGGTSCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCC----h-----hHHHHHhhCCCCHHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHH
Confidence 5578999999999999865321 0 011112222234578999999997 6888887654321
Q ss_pred ------Cch--hhHhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCCeEEEec
Q 007513 95 ------EPA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHS 166 (600)
Q Consensus 95 ------~~~--~~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~vlnt 166 (600)
.+. .+.+|..++...|..+|+++|+++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 89 el~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln- 165 (396)
T 3ii9_A 89 EVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKV--PGGYSLS- 165 (396)
T ss_dssp HHHTTCHHHHHHHHCCCCCCCHHHHHHSCHHHHHHHHHHHHHTSSCEEEECCCCC------CCCCEEEEE--TTEEEEE-
T ss_pred HHHHhChhHHHHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCChhhCeeEEEEe--CCEEEEE-
Confidence 122 23345556667789999999999999999999999999999999999999999999998 8999999
Q ss_pred CCCCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccceeEEecc
Q 007513 167 PTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEH 246 (600)
Q Consensus 167 p~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fd~ 246 (600)
|+|.||+| +..||+++|+|++..+ +..|+++|+|| .+.|||++.+.|+++| +++++++.|.|||
T Consensus 166 ----G~K~~vs~-a~~Ad~~~v~a~~~~~-g~~g~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v~fdd 229 (396)
T 3ii9_A 166 ----GSKMWITN-SPIADVFVVWAKLDED-GRDEIRGFILE-------KGCKGLSAPAIHGKVG---LRASITGEIVLDE 229 (396)
T ss_dssp ----EEEEEEET-GGGCSEEEEEEEEEET-TEEEEEEEEEE-------TTCTTEECCBCCCCSS---CTTSCEEEEEEEE
T ss_pred ----EEEEeECC-CccCCEEEEEEEecCC-CCCceEEEEEe-------cCCCCeEecccccccc---CCcCCeeEEEEcc
Confidence 99999999 8999999999998633 33579999999 7889999999999999 9999999999999
Q ss_pred eecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccch
Q 007513 247 VRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDY 326 (600)
Q Consensus 247 v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~i~~~ 326 (600)
|+||.+++|+ . +.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++|
T Consensus 230 v~Vp~~~~l~-----~-~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-------~i~~~ 290 (396)
T 3ii9_A 230 AFVPEENILP-----H-VKGLR------GPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGR-------PLAAN 290 (396)
T ss_dssp EEEEGGGBCT-----T-CCSTH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGGS
T ss_pred EEECHHHccC-----C-ChHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCeeCCC-------chhhh
Confidence 9999999997 3 43333 5667788899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhcccccccc
Q 007513 327 KTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCS 406 (600)
Q Consensus 327 q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G~~~~ 406 (600)
|.+||+|++|.+.+++++.+++++++.+++. .+....++++|.++++.+.++++.|+|+|||+||+++
T Consensus 291 q~vq~~la~~~~~~~aar~~~~~aa~~~d~~------------~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~ 358 (396)
T 3ii9_A 291 QLIQKKLADMQTEITLGLQGVLRLGRMKDEG------------TAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDE 358 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCSCSCSGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------CCchHHHHHHHHHHHHHHHHHHHHHHHhhCcccccCC
Confidence 9999999999999999999999999887641 1234567899999999999999999999999999999
Q ss_pred CChhHHhhhhcccccccchhHHHHHHHHHHHHH
Q 007513 407 SGLPELFAVYVPACTYEGDNIVLLLQVARFLMK 439 (600)
Q Consensus 407 ~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~ 439 (600)
++++++|||++...+++|++++++..|++.+++
T Consensus 359 ~~~~r~~Rda~~~~i~~Gt~~~~~~~ia~~llg 391 (396)
T 3ii9_A 359 FGVARHLVNLEVVNTYEGTHDIHALILGRAQTG 391 (396)
T ss_dssp GHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHS
T ss_pred CcHHHHHhhhcCceeecCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999985
No 21
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=1.4e-54 Score=460.90 Aligned_cols=354 Identities=21% Similarity=0.219 Sum_probs=296.0
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHHHhhcC------
Q 007513 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------ 94 (600)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~g~~~~~~~------ 94 (600)
..++||.++++.+++|+.++.... ....+....+..++|+.+.+.|| |+++||.+.++.+
T Consensus 15 ~~~~~~~~l~~~~r~~~~~~~~~~---------~~~~d~~~~~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~e 85 (387)
T 3nf4_A 15 LPSQEAAELIELTREIADKVLDPI---------VDRHEKDETYPEGVFEQLGAAGLLSLPQPEEWGGGGQPYEVYLQVLE 85 (387)
T ss_dssp CSSHHHHHHHHHHHHHHHHHTTTT---------HHHHHHHTCCCTTHHHHHHTTTTTSTTSCGGGTCCCCCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhCCcc---------HHHHhhhCCCCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHH
Confidence 346899999999999997643210 11122222234568999999997 6888886644321
Q ss_pred ------Cchh--hHhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCCeEEEec
Q 007513 95 ------EPAF--TDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHS 166 (600)
Q Consensus 95 ------~~~~--~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~vlnt 166 (600)
.+.+ +..|. +++..|..+|+++|+++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 86 el~~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~~ln- 161 (387)
T 3nf4_A 86 EIAARWASVAVAVSVHS-LSSHPLLVFGTEEQKKRWLPGMLSGEQIGAYSLSEPQAGSDAAALRCAATPT--DGGYVIN- 161 (387)
T ss_dssp HHHTTCHHHHHHHHHHH-HHTHHHHHHSCHHHHHHHHHHHTTSSCCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEE-
T ss_pred HHHHhCchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEEcCCCCCCChhhCEEEEEEe--CCEEEEE-
Confidence 1222 23343 6677889999999999999999999999999999999999999999999998 8999999
Q ss_pred CCCCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccceeEEecc
Q 007513 167 PTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEH 246 (600)
Q Consensus 167 p~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fd~ 246 (600)
|+|.||+| +..||+++|+|++. ++..|+++|+|| .+.|||++.+.|+++| +++++++.|.|||
T Consensus 162 ----G~K~~~s~-~~~Ad~~~v~a~~~--~~~~g~~~flV~-------~~~pGv~~~~~~~~~G---~~~~~~~~v~fd~ 224 (387)
T 3nf4_A 162 ----GSKSWITH-GGKADFYTLFARTG--EGSRGVSCFLVP-------ADQPGLSFGKPEEKMG---LHAVPTTSAFYDN 224 (387)
T ss_dssp ----EEEEEEET-TTTCSEEEEEEECC----CCCEEEEEEE-------TTCTTEEECCCCCBSS---CCSSCEEEEEEEE
T ss_pred ----eEEecccC-CcccCEEEEEEEeC--CCCCceEEEEEE-------CCCCCeEecCcccccc---cCCCCeeEEEEee
Confidence 99999999 89999999999975 334689999999 7889999999999999 9999999999999
Q ss_pred eecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccch
Q 007513 247 VRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDY 326 (600)
Q Consensus 247 v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~i~~~ 326 (600)
|+||.+++|+ ..|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++|
T Consensus 225 v~Vp~~~~lg-----~~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~-------~i~~~ 286 (387)
T 3nf4_A 225 ARIDADRRIG-----EEGQGLQ------IAFSALDSGRLGIAAVATGLAQAALDEAVAYANERTAFGR-------KIIDH 286 (387)
T ss_dssp EEEEGGGEES-----STTCHHH------HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------------CTTTC
T ss_pred EEecHHHcCC-----CCCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCC-------chhhh
Confidence 9999999998 5565544 5667788899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhcccccccc
Q 007513 327 KTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCS 406 (600)
Q Consensus 327 q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G~~~~ 406 (600)
|.+||+|++|.+.+++++.+++++++.+++ + .+....++++|+++++.+.++++.|+|+|||+||+++
T Consensus 287 q~v~~~la~~~~~~~aar~~~~~aa~~~~~-------~-----~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~G~~~~ 354 (387)
T 3nf4_A 287 QGLGFLLADMAAAVATARATYLDAARRRDQ-------G-----RPYSQQASIAKLTATDAAMKVTTDAVQVFGGVGYTRD 354 (387)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------T-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------C-----CCchHHHHHHHHHHHHHHHHHHHHHHHhhCcHhhcCC
Confidence 999999999999999999999999887752 1 1234567899999999999999999999999999999
Q ss_pred CChhHHhhhhcccccccchhHHHHHHHHHHHHH
Q 007513 407 SGLPELFAVYVPACTYEGDNIVLLLQVARFLMK 439 (600)
Q Consensus 407 ~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~ 439 (600)
++++++|||++...+++|++++++..|++.+++
T Consensus 355 ~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l~~ 387 (387)
T 3nf4_A 355 YRVERYMREAKIMQIFEGTNQIQRLVIARGLTR 387 (387)
T ss_dssp SSHHHHHHHHHHHTTSSSCHHHHHHHHHHTTC-
T ss_pred CcHHHHHhHhhcCeeecChHHHHHHHHHHHHhC
Confidence 999999999999999999999999999998764
No 22
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=100.00 E-value=8.9e-54 Score=456.91 Aligned_cols=351 Identities=22% Similarity=0.235 Sum_probs=303.4
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHH-HHHHHHHHHccCC----HHHHHHHHhhcC------
Q 007513 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKA-AYAWKRIIELRLS----EEEASMLRSSVD------ 94 (600)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~----~~~~g~~~~~~~------ 94 (600)
..++||.++++++++|+.++.... ....+....+. .++|+.+.+.||. +++||.+.++..
T Consensus 29 ~l~~e~~~l~~~~r~~~~~~~~~~---------~~~~~~~~~~p~~~~~~~l~~~Gl~~l~~~e~GG~g~~~~~~~~v~e 99 (403)
T 3sf6_A 29 VLSAEEREIRDTVRSVVQRRIKPH---------IASWYEDGELPARELAVELGELGLLGMHLKGYGCAGMSAVAYGLACL 99 (403)
T ss_dssp GSCHHHHHHHHHHHHHHHHHTTTT---------HHHHHHHTCCCHHHHHHHHHHTTCSSTTSCSTTCCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcChh---------HHHHHhcCCCCHHHHHHHHHHCCCCcccchhhCCCCCCHHHHHHHHH
Confidence 457899999999999997742110 11112222234 6789999999873 566776544321
Q ss_pred ------Cch--hhHhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCCeEEEec
Q 007513 95 ------EPA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHS 166 (600)
Q Consensus 95 ------~~~--~~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~vlnt 166 (600)
.+. .+.+|..+++..|..+|+++||++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 100 ela~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln- 176 (403)
T 3sf6_A 100 ELEAGDSGIRSLVSVQGSLAMYAIHAFGSDEQKDQWLPDMASGHRIGCFGLTEPDHGSDPAGMRTRATRS--GDDWILT- 176 (403)
T ss_dssp HHHHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEE-
T ss_pred HHHHhcccHHHHHHHhhhhHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEEccCCCCCCchhcEEEEEEE--CCEEEEE-
Confidence 122 23456667788899999999999999999999999999999999999999999999998 7899999
Q ss_pred CCCCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccceeEEecc
Q 007513 167 PTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEH 246 (600)
Q Consensus 167 p~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fd~ 246 (600)
|+|.||+| +..||+++|+|+++ .|+++|+|| .+.|||++.+.|+++| +++++++.|.|||
T Consensus 177 ----G~K~~is~-a~~Ad~~~v~ar~~-----~g~~~flV~-------~~~pGv~v~~~~~~~G---~r~~~~~~v~fd~ 236 (403)
T 3sf6_A 177 ----GTKMWITN-GSVADVAVVWARTD-----EGIRGFVVP-------TDTPGFTANTIKSKMS---LRASVTSELVLDG 236 (403)
T ss_dssp ----EEEEEEET-GGGCSEEEEEEEET-----TEEEEEEEE-------TTSTTEEEEECCSCSS---CTTSCEEEEEEEE
T ss_pred ----EEEEeecC-CcccCEEEEEEEeC-----CceEEEEEE-------CCCCCeEecCCCCccC---CCCCceeEEEEcc
Confidence 99999999 89999999999974 479999999 7889999999999999 9999999999999
Q ss_pred eecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccch
Q 007513 247 VRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDY 326 (600)
Q Consensus 247 v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~i~~~ 326 (600)
|+||.+++|+ . +.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++|
T Consensus 237 v~Vp~~~~lg-----~-~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-------pi~~~ 297 (403)
T 3sf6_A 237 VRLPDSARLP-----G-ATSLG------APLRCLNEARFGIVFGALGAARDCLETALAYACSREQFDR-------PIGGF 297 (403)
T ss_dssp EEEEGGGBCT-----T-CCSTH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGGS
T ss_pred EEEcHHHccC-----C-ChhHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCC-------cchhh
Confidence 9999999997 4 44443 5667788999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhcccccccc
Q 007513 327 KTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCS 406 (600)
Q Consensus 327 q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G~~~~ 406 (600)
|.+||+|++|.+.+++++.+++++++.++. +. +....++++|+++++.+.++++.|+|+|||+||+++
T Consensus 298 q~vq~~la~~~~~~~aar~~~~~aa~~~d~-------~~-----~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~ 365 (403)
T 3sf6_A 298 QLTQQKLADMTLEYGKGFLLALHLGRQKDA-------GE-----LAPEQVSLGKLNNVREAIEIARTARTVLGASGITGE 365 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC-----CchHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcccc
Confidence 999999999999999999999999988763 11 234568899999999999999999999999999999
Q ss_pred CChhHHhhhhcccccccchhHHHHHHHHHHHHH
Q 007513 407 SGLPELFAVYVPACTYEGDNIVLLLQVARFLMK 439 (600)
Q Consensus 407 ~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~ 439 (600)
++++++|||++...+++|++++++..|++.+++
T Consensus 366 ~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~llg 398 (403)
T 3sf6_A 366 YPVMRHANNLESVLTYEGTSEMHTLIIGQALTG 398 (403)
T ss_dssp SSHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHS
T ss_pred CcHHHHHhhcccceeecCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999985
No 23
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=100.00 E-value=7.2e-54 Score=457.16 Aligned_cols=364 Identities=20% Similarity=0.259 Sum_probs=308.7
Q ss_pred cCCCCHHHH-HHHHcCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccCC----HHHHH
Q 007513 13 KAQFDVDEM-KIVWAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRLS----EEEAS 87 (600)
Q Consensus 13 ~~~f~~~~l-~~~~~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~~g 87 (600)
+..++...+ ...+..++||.++++++++|+.++.. + .....+....+..++|+.+.+.||. +++||
T Consensus 11 ~~~~~~~~~~~m~~~l~~e~~~l~~~~r~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~~e~GG 81 (399)
T 3swo_A 11 KSTYAPLELFDTDRLLDQDERDIAATVRQFVDTRLK----P-----NVEGWFESATLPSELAKEFGNLGVLGMHLQGYGC 81 (399)
T ss_dssp CCCCCHHHHHTGGGGSCHHHHHHHHHHHHHHHHHTH----H-----HHHHHHHHTCCCTTHHHHHHHHTCTTTTSCSTTC
T ss_pred CccccccccccCCCCCCHHHHHHHHHHHHHHHHhCC----h-----hHHHHHhhCCCCHHHHHHHHHCCCCcCChhhhCC
Confidence 445664443 33345679999999999999976321 0 0111111112335689999988863 56677
Q ss_pred HHHhhcC------------Cch--hhHhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEE
Q 007513 88 MLRSSVD------------EPA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTA 153 (600)
Q Consensus 88 ~~~~~~~------------~~~--~~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA 153 (600)
.+.++.+ .+. .+.+|..++...|..+|+++|+++|||++.+|+.++|+++|||++|||+.+++|+|
T Consensus 82 ~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A 161 (399)
T 3swo_A 82 AGTNAVSYGLACMELEAGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRTRA 161 (399)
T ss_dssp CCCCHHHHHHHHHHHHHHCHHHHHHHHHHTTTHHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEE
T ss_pred CCCCHHHHHHHHHHHHHhCccHHHHHHHHhhhhhhHHHhcCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCCccceEEE
Confidence 6544321 122 23456567788899999999999999999999999999999999999999999999
Q ss_pred EEeCCCCeEEEecCCCCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCC
Q 007513 154 TFDPQTDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGA 233 (600)
Q Consensus 154 ~~d~~~~~~vlntp~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~ 233 (600)
+++ +|+|+|| |+|.||+| +..||+++|+|+++ .|+++|+|| .+.|||++.+.|+++|
T Consensus 162 ~~~--~~g~~ln-----G~K~~vs~-a~~Ad~~~v~a~~~-----~g~~~flV~-------~~~pGv~v~~~~~~~G--- 218 (399)
T 3swo_A 162 RRD--GSDWILN-----GTKMWITN-GNLADVATVWAQTD-----DGIRGFLVP-------TDTPGFTANEIHRKLS--- 218 (399)
T ss_dssp EEE--TTEEEEE-----EEEEEEET-TTTCSEEEEEEBCT-----TSCEEEEEE-------TTSTTEEEEECCCBSS---
T ss_pred EEe--CCEEEEE-----EEEEeECC-CCccCEEEEEEEeC-----CceEEEEEe-------CCCCCeEeecCcCccc---
Confidence 998 7899999 99999999 89999999999863 468999999 7889999999999999
Q ss_pred cCcccceeEEecceecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccC
Q 007513 234 YNTMDNGVLRFEHVRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFG 313 (600)
Q Consensus 234 ~~~~~~~~v~fd~v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg 313 (600)
+++++++.|.||||+||.+++|+ . |.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||
T Consensus 219 ~r~~~~~~v~fd~v~Vp~~~~lg-----~-~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fG 286 (399)
T 3swo_A 219 LRASVTSELVLDNVRLPASAQLP-----L-AEGLS------APLSCLNEARFGIVFGALGAARDSLETTIAYTQSREVFD 286 (399)
T ss_dssp CCSSCEEEEEEEEEEECGGGBCT-----T-CCSTH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETT
T ss_pred CCCCceeEEEEccEEEcHHHcCC-----C-ChhHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeCC
Confidence 99999999999999999999997 4 44443 566778899999999999999999999999999999999
Q ss_pred CCCCCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHH
Q 007513 314 SKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEE 393 (600)
Q Consensus 314 ~~~~~~~~~i~~~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~ 393 (600)
+ ||++||.+||+|++|.+.+++++.+++++++.++. + .+....++++|+++++.+.++++.
T Consensus 287 ~-------~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~-------~-----~~~~~~~~~aK~~a~~~a~~v~~~ 347 (399)
T 3swo_A 287 K-------PLSNYQLTQEKLANMTVELGKGMLLAIHLGRIKDA-------E-----GVRPEQISLGKLNNVREAIAIARE 347 (399)
T ss_dssp E-------EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------T-----CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred c-------chhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------C-----CCchHHHHHHHHHHHHHHHHHHHH
Confidence 9 99999999999999999999999999999987752 1 124566889999999999999999
Q ss_pred HHHHhccccccccCChhHHhhhhcccccccchhHHHHHHHHHHHHH
Q 007513 394 CRKLCGGHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMK 439 (600)
Q Consensus 394 ~~q~~GG~G~~~~~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~ 439 (600)
|+|+|||+||+++++++++|||++...+++|++++++..+++.+++
T Consensus 348 a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~llg 393 (399)
T 3swo_A 348 CRTLLGGSGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGKALTG 393 (399)
T ss_dssp HHHHHGGGGGBSSSTHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHS
T ss_pred HHHhhCcccccCCCcHHHHHHHhhcceeecCHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999985
No 24
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=100.00 E-value=6.6e-54 Score=461.31 Aligned_cols=353 Identities=21% Similarity=0.270 Sum_probs=300.0
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccCC----HHHHHHHHhhcC-------
Q 007513 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRLS----EEEASMLRSSVD------- 94 (600)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~~g~~~~~~~------- 94 (600)
..++||.++++++++|++++.. +. .........+..++|+.+.+.||. +++||.+.++..
T Consensus 54 ~l~~e~~~l~~~~r~f~~~~~~----p~-----~~~~~~~~~~p~~~~~~l~e~Gl~~l~~pe~GG~G~~~~~~~~v~ee 124 (436)
T 2ix5_A 54 LLTPEEQAIRKKVRECMEKEVA----PI-----MTEYWEKAEFPFHITPKLGAMGVAGGSIKGYGCPGLSITANAIATAE 124 (436)
T ss_dssp GSCHHHHHHHHHHHHHHHHHTH----HH-----HHHHHHHTCCCGGGHHHHHTTTCTTTTCCSTTCCCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhhCC----hh-----hHHHHhcCCCCHHHHHHHHHcCCCcCcCCCCCCCCCCHHHHHHHHHH
Confidence 4578999999999999976321 00 011111112335689999999972 377776543321
Q ss_pred -----Cchh--hHhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCCeEEEecC
Q 007513 95 -----EPAF--TDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSP 167 (600)
Q Consensus 95 -----~~~~--~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~vlntp 167 (600)
.+.+ +.+|..+++..|..+|+++||++|||++.+|+.++|+++|||++|||+.+++|+|+++ +|+|+||
T Consensus 125 la~~~~~~~~~~~~~~~~~~~~l~~~gt~~qk~~~l~~l~~G~~~~a~a~tEp~~GSd~~~~~t~A~~~--gdg~vLn-- 200 (436)
T 2ix5_A 125 IARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTATKV--EGGWKIN-- 200 (436)
T ss_dssp HHHHCHHHHHHHHHHHTTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEE--
T ss_pred HHhhCccHHHHHHhHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCcccceEEEEEe--CCEEEEe--
Confidence 1222 3456667788899999999999999999999999999999999999999999999998 7899999
Q ss_pred CCCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccceeEEecce
Q 007513 168 TLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHV 247 (600)
Q Consensus 168 ~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fd~v 247 (600)
|+|.||+| +..||+++|+|++..+ .++++|+|| .+.|||++.+.|+++| +++++++.|.||||
T Consensus 201 ---G~K~~is~-a~~Ad~~lv~Ar~~~~---~~~~~flV~-------~~~pGv~v~~~~~~~G---~r~~~~~~v~fddv 263 (436)
T 2ix5_A 201 ---GQKRWIGN-STFADLLIIFARNTTT---NQINGFIVK-------KDAPGLKATKIPNKIG---LRMVQNGDILLQNV 263 (436)
T ss_dssp ---EEEEEEET-TTTCSEEEEEEEETTT---SSEEEEEEE-------TTCTTEEEEECCCBSS---STTSCEEEEEEEEE
T ss_pred ---eeccCCCC-CcccCEEEEEEEECCC---CcEEEEEEE-------CCCCCeEeeccccccC---CCcCCceeEEeccE
Confidence 99999999 8999999999997522 368999999 7889999999999999 99999999999999
Q ss_pred ecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccchH
Q 007513 248 RIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYK 327 (600)
Q Consensus 248 ~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~i~~~q 327 (600)
+||.+++|+ ..+ ++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++||
T Consensus 264 ~VP~~~~lg-----~~~-g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~qfG~-------pi~~~q 324 (436)
T 2ix5_A 264 FVPDEDRLP-----GVN-SFQ------DTSKVLAVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGA-------PLAAFQ 324 (436)
T ss_dssp EEEGGGBCT-----TCS-SHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGGSH
T ss_pred EECHHHcCC-----ccc-cHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCc-------chhhcH
Confidence 999999997 321 122 4566788899999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhccccccccC
Q 007513 328 TQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCSS 407 (600)
Q Consensus 328 ~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G~~~~~ 407 (600)
.+||+|++|.+.+++++++++++++.+++ +. .....++++|+++++.+.++++.|+|+|||+||++++
T Consensus 325 ~vq~~la~~~~~~~aar~l~~~aa~~~d~-------g~-----~~~~~as~aK~~a~e~a~~v~~~a~q~~Gg~G~~~e~ 392 (436)
T 2ix5_A 325 LNQQKLVQMLGNVQAMFLMGWRLCKLYET-------GQ-----MTPGQASLGKAWISSKARETASLGRELLGGNGILADF 392 (436)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CC-----CchHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCC
Confidence 99999999999999999999999887752 11 2344578999999999999999999999999999999
Q ss_pred ChhHHhhhhcccccccchhHHHHHHHHHHHHH
Q 007513 408 GLPELFAVYVPACTYEGDNIVLLLQVARFLMK 439 (600)
Q Consensus 408 ~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~ 439 (600)
+++++|||++...+++|++++++..+++.+++
T Consensus 393 ~l~r~~Rda~~~~i~~Gt~ei~~~~iar~llg 424 (436)
T 2ix5_A 393 LVAKAFCDLEPIYTYEGTYDINTLVTGREVTG 424 (436)
T ss_dssp SHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHS
T ss_pred hHHHHHHHhhcceeecCHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999875
No 25
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=100.00 E-value=1.6e-53 Score=452.53 Aligned_cols=352 Identities=21% Similarity=0.245 Sum_probs=296.3
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHHHhhcC------
Q 007513 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------ 94 (600)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~g~~~~~~~------ 94 (600)
..++||.++++++++|+.++.. + .....+........+|+.+.+.|| |+++||.+.++..
T Consensus 10 ~~~~~~~~l~~~~r~~~~~~~~----~-----~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~e 80 (385)
T 2eba_A 10 LLTPEEKEVQKAARRFLEKEAL----P-----HIRDWWEEGVFPTHLIPRFAELGFLGPTLPPEYGGAGVSSAAYGLICY 80 (385)
T ss_dssp GSCHHHHHHHHHHHHHHHHHTH----H-----HHHHHHHTTCCCGGGHHHHHHHTCSSTTSCGGGTCCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCC----c-----cHHHHHHhCCCCHHHHHHHHHCCCcCCCCchhhCCCCCCHHHHHHHHH
Confidence 4468999999999999965321 0 001111111123468999999887 6788886544321
Q ss_pred ------Cch--hhHhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCC-CCCceEEEEeCCCCeEEEe
Q 007513 95 ------EPA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNV-QGLETTATFDPQTDEFVIH 165 (600)
Q Consensus 95 ------~~~--~~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~-~~~~ttA~~d~~~~~~vln 165 (600)
.+. .+.+|..+++..|..+|+++||++|||++.+|+.++|+++|||++|||+ .+++|+|+++ +|+|+||
T Consensus 81 ela~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~~t~A~~~--~~g~~ln 158 (385)
T 2eba_A 81 ELERVDSGLRSFVSVQSSLVMYPIYAYGSEEQKREFLPKLARGEMVGCFGLTEPDGGSDPYGNMKTRARRE--GDTWVLN 158 (385)
T ss_dssp HHHHHCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCCTTCTTSTTTTCCCEEEC----CEEEEE
T ss_pred HHHHhCchHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCcCCCccccCeeEEEEe--CCEEEEE
Confidence 122 2345556777889999999999999999999999999999999999999 9999999988 7899999
Q ss_pred cCCCCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccceeEEec
Q 007513 166 SPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFE 245 (600)
Q Consensus 166 tp~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fd 245 (600)
|+|.||+| +..||+++|+|+++ ++ . +++|+|| .+.|||++.+.|+++| +++++++.|.||
T Consensus 159 -----G~K~~~s~-~~~Ad~~~v~a~~~-~g--~-~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v~f~ 218 (385)
T 2eba_A 159 -----GTKMWITN-GNLAHLAVIWAKDE-GG--E-VLGFLVP-------TDTPGFQAREVKRKMS---LRASVTSELVLE 218 (385)
T ss_dssp -----EEEEEEET-TTTCSEEEEEEECC-------EEEEEEE-------TTSTTEEEEECCSBSS---SCSSCEEEEEEE
T ss_pred -----eeeeccCC-CcccCEEEEEEEeC-CC--c-EEEEEEe-------CCCCCeEecccccccc---cccCceeEEEEc
Confidence 99999999 89999999999974 22 2 8899999 7889999999999999 999999999999
Q ss_pred ceecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccc
Q 007513 246 HVRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVID 325 (600)
Q Consensus 246 ~v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~i~~ 325 (600)
||+||.+++|. .|.++. .....+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++
T Consensus 219 ~v~Vp~~~~l~------~~~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-------~i~~ 279 (385)
T 2eba_A 219 EVRVPESLRLP------KALGLK------APLSCLTQARFGIAWGAMGALEAVYEEAVAFAKSRSTFGE-------PLAK 279 (385)
T ss_dssp EEEEEGGGBCT------TCCSTH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSS-------BGGG
T ss_pred cEEEcHHHccC------CCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCeeCCe-------eHHh
Confidence 99999999984 233332 4556778899999999999999999999999999999999 9999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhccccccc
Q 007513 326 YKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLC 405 (600)
Q Consensus 326 ~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G~~~ 405 (600)
||.+||+|++|.+.+++++.+++++++.+++ +. +....++++|.++++.+.++++.|+|+|||+||++
T Consensus 280 ~q~vq~~la~~~~~~~aar~~~~~aa~~~d~-------g~-----~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~ 347 (385)
T 2eba_A 280 KQLVQAKLAEMLAWHTEGLLLAWRLARLKDE-------GK-----LTPAQVSLAKRQNVWKALQAARMARDILGGSGITL 347 (385)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC-----CchHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 9999999999999999999999999887752 11 23456789999999999999999999999999999
Q ss_pred cCChhHHhhhhcccccccchhHHHHHHHHHHHHH
Q 007513 406 SSGLPELFAVYVPACTYEGDNIVLLLQVARFLMK 439 (600)
Q Consensus 406 ~~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~ 439 (600)
+++++++|||++...+++|++++++..+++.+++
T Consensus 348 ~~~l~r~~Rda~~~~~~~G~~~~~~~~ia~~llg 381 (385)
T 2eba_A 348 EYHAIRHMLNLETVYTYEGTHDVHTLVLGREITG 381 (385)
T ss_dssp TSSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHS
T ss_pred cChHHHHHHhccCceeeCChHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999875
No 26
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.7e-53 Score=453.52 Aligned_cols=376 Identities=17% Similarity=0.204 Sum_probs=301.4
Q ss_pred CCHHHHHHHHcCChhhHHHHHHHHHHHhcCC-CCCCCcccCCCHH----H-HHHHHHHHHHHHHHHHHHccCC----HHH
Q 007513 16 FDVDEMKIVWAGSRHAFQVSDRIARLVASDP-AFRKDNRAMLSRK----E-LFKNTLRKAAYAWKRIIELRLS----EEE 85 (600)
Q Consensus 16 f~~~~l~~~~~~~~e~~~l~~~~~~~l~~~~-~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~g~~----~~~ 85 (600)
|+...|++ ..++||.++++++++|++++. ...... ...++. + .+. .......+|+.+.+.||. ++
T Consensus 14 ~~~~~m~~--~~~~e~~~l~~~~r~f~~~~~~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~Gl~~l~~P~- 88 (428)
T 2wbi_A 14 IDTTGQLF--VQTRKGQEVLIKVKHFMKQHILPAEKEV-TEFYVQNENSVDKWG-KPLVIDKLKEMAKVEGLWNLFLPA- 88 (428)
T ss_dssp ----------CCCHHHHHHHHHHHHHHHHTHHHHHHHH-HC----------CCS-CCHHHHHHHHHHHHTTCCSTTCHH-
T ss_pred CCCccCCC--CCCHHHHHHHHHHHHHHHhhCCchhcch-hHHhhhccccccccC-CcccHHHHHHHHHHCCCCeecCCC-
Confidence 56667765 456899999999999998752 100000 000000 0 000 002346789999999983 44
Q ss_pred HHHHHhh---------cCC----chhhHhh--HhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCC-CCCCCCCC
Q 007513 86 ASMLRSS---------VDE----PAFTDLH--WGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELG-HGSNVQGL 149 (600)
Q Consensus 86 ~g~~~~~---------~~~----~~~~~~~--~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~-~Gsd~~~~ 149 (600)
|.+.++ +.. +.++..+ ..++...|..+|+++||++|||++++|+.++|+++|||+ +|||+.++
T Consensus 89 -G~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~l~~G~~~~~~a~tEp~~aGsd~~~~ 167 (428)
T 2wbi_A 89 -VSGLSHVDYALIAEETGKCFFAPDVFNCQAPDTGNMEVLHLYGSEEQKKQWLEPLLQGNITSCFCMTEPDVASSDATNI 167 (428)
T ss_dssp -HHCCCHHHHHHHHHHHTTSTTHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHHTSSEEEEECCCTTSCTTSGGGC
T ss_pred -CCCCCHHHHHHHHHHHHhhcchhhhHhhhccchhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEEecCCcCCCCcccc
Confidence 333222 111 1122222 124556788899999999999999999999999999999 99999999
Q ss_pred ceEEEEeCCCCeEEEecCCCCccccccCCCCCC--ccEEEEEEEEccCC--CCCceEEEEEEeccCCCCCCCCCeEEeec
Q 007513 150 ETTATFDPQTDEFVIHSPTLTSSKWWPGGLGKV--STHAVVYARLITDG--QDHGVNGFIVQLRSLEDHSPLPGITIGDI 225 (600)
Q Consensus 150 ~ttA~~d~~~~~~vlntp~~~G~K~~i~~~a~~--Ad~~lV~A~~~~~~--~~~g~~~flV~~rd~~~~~~~pGv~v~~~ 225 (600)
+|+|+++ +|+|+|| |+|+||+| +.. ||+++|+|+++.++ +..|+++|+|| .+.|||++.+.
T Consensus 168 ~t~A~~~--~~g~~ln-----G~K~~is~-a~~~~Ad~~~v~art~~~~~~~~~g~~~flV~-------~~~pGv~v~~~ 232 (428)
T 2wbi_A 168 ECSIQRD--EDSYVIN-----GKKWWSSG-AGNPKCKIAIVLGRTQNTSLSRHKQHSMILVP-------MNTPGVKIIRP 232 (428)
T ss_dssp CCEEEEE--TTEEEEE-----EEEEEEET-TTSTTEEEEEEEEECCCTTSCGGGCEEEEEEE-------TTSTTEEEEEE
T ss_pred eEEEEEe--CCEEEEE-----eEEeccCC-CCCCcCCEEEEEEEeCCccCCCCCceEEEEEE-------CCCCcEEecCC
Confidence 9999998 7899999 99999999 777 99999999986442 34578999999 78899999999
Q ss_pred CCccCCCCcCccc---ceeEEecceecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007513 226 GMKFGNGAYNTMD---NGVLRFEHVRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIA 302 (600)
Q Consensus 226 ~~~~G~~~~~~~~---~~~v~fd~v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a 302 (600)
|+++| +++++ ++.|.||||+||.+++|+ ..|.++. .....+..+|+.+++.++|+++++++.+
T Consensus 233 ~~~~G---~~~~~~~~~~~v~fddv~VP~~~~lg-----~~g~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a 298 (428)
T 2wbi_A 233 LSVFG---YTDNFHGGHFEIHFNQVRVPATNLIL-----GEGRGFE------ISQGRLGPGRIHHCMRTVGLAERALQIM 298 (428)
T ss_dssp CCBTT---BCCGGGCCEEEEEEEEEEEEGGGBCS-----CTTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccc---cCCCCCCCeEEEEeCceEECHHHhcC-----CccchHH------HHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 99999 99985 899999999999999998 5555544 5566778899999999999999999999
Q ss_pred HHHhhhhcccCCCCCCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHH
Q 007513 303 TRYSAVRRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSL 382 (600)
Q Consensus 303 ~~ya~~R~qfg~~~~~~~~~i~~~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~ 382 (600)
++|+++|+|||+ ||++||.+||+|++|.+.+++++++++++++.+++.- ..+....++++|++
T Consensus 299 ~~ya~~R~~fG~-------~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~g----------~~~~~~~~~~aK~~ 361 (428)
T 2wbi_A 299 CERATQRIAFKK-------KLYAHEVVAHWIAESRIAIEKIRLLTLKAAHSMDTLG----------SAGAKKEIAMIKVA 361 (428)
T ss_dssp HHHHHHCEETTE-------EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHTHHHHHHHHHH
T ss_pred HHHHhhCcccCC-------ChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC----------CcchHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999998876410 02345678999999
Q ss_pred HHHHHHHHHHHHHHHhccccccccCChhHHhhhhcccccccchhHHHHHHHHHHHHHHHHH
Q 007513 383 TTTATADGIEECRKLCGGHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTVSQ 443 (600)
Q Consensus 383 ~t~~a~~~~~~~~q~~GG~G~~~~~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~~~~~ 443 (600)
+++.+.++++.|+|+|||+||+++++++++|||++...+++|++++++..+++.+|+.+++
T Consensus 362 a~e~a~~v~~~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~G~~~~~~~~ia~~~l~~~~~ 422 (428)
T 2wbi_A 362 APRAVSKIVDWAIQVCGGAGVSQDYPLANMYAITRVLRLADGPDEVHLSAIATMELRDQAK 422 (428)
T ss_dssp HHHHHHHHHHHHHHHTGGGGGSTTSSHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCcccCCCCcHHHHHHHHhhcEecCChHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999999999998765
No 27
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=100.00 E-value=3.2e-53 Score=452.03 Aligned_cols=354 Identities=18% Similarity=0.242 Sum_probs=304.0
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHH-HHHHHHHHHccC-----CHHHHHHHH--hhcCC--
Q 007513 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKA-AYAWKRIIELRL-----SEEEASMLR--SSVDE-- 95 (600)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~-----~~~~~g~~~--~~~~~-- 95 (600)
..++||.++++++++|+.++.. . .....+....+. .++|+.+.+.|| |+++||.+. +....
T Consensus 4 ~~~~~~~~l~~~~r~~~~~~~~--~-------~~~~~d~~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~~~ 74 (397)
T 3mpi_A 4 NLSKELQMLQKEVRNFVNKKIV--P-------FADQWDNENHFPYEEAVRPMGELGFFGTVIPEEYGGEGMDQGWLAAMI 74 (397)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTT--T-------THHHHHHHTCCCTTTTHHHHHHTTTTCTTSCGGGTSCCCTTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCC--h-------hHHHHHhcCCCCHHHHHHHHHHCCCCccCCChhhCCCCCCCCHHHHHH
Confidence 4578999999999999986431 1 011122222233 578999999997 688888776 44221
Q ss_pred ----------chh--hHhhHhchHH-HHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCCeE
Q 007513 96 ----------PAF--TDLHWGMFVP-AIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEF 162 (600)
Q Consensus 96 ----------~~~--~~~~~~l~~~-~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~ 162 (600)
+.+ +.+| .+++. .|..+|+++|+++|||++.+|+.++|+++|||++|||+.++.|+|+++ +|+|
T Consensus 75 v~eela~~~~~~~~~~~~~-~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~ 151 (397)
T 3mpi_A 75 VTEEIARGSSALRVQLNME-VLGCAYTILTYGSEALKKKYVPKLSSAEFLGGFGITEPDAGSDVMAMSSTAEDK--GDHW 151 (397)
T ss_dssp HHHHHHHHCHHHHHHHHHH-TTTTHHHHHHHSCHHHHHHHHHHHHTTSSCCCEECCBTTBSSCGGGCCCEEEEC--SSEE
T ss_pred HHHHHHhhCchHHHHHHHH-HHhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeEEEEEe--CCEE
Confidence 222 2334 45566 889999999999999999999999999999999999999999999998 7899
Q ss_pred EEecCCCCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEE-EeccCCCCCCCCCeEEeecCCccCCCCcCccccee
Q 007513 163 VIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIV-QLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGV 241 (600)
Q Consensus 163 vlntp~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV-~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~ 241 (600)
+|| |+|.|++| +..||+++|+|++..+++..|+.+|+| | .+.|||++ +.|+++| +++++++.
T Consensus 152 ~ln-----G~K~~~s~-~~~Ad~~~v~a~~~~~~~~~g~~~flV~~-------~~~~Gv~v-~~~~~~G---~~~~~~~~ 214 (397)
T 3mpi_A 152 LLN-----GSKTWISN-AAQADVLIYYAYTDKAAGSRGLSAFVIEP-------RNFPGIKT-SNLEKLG---SHASPTGE 214 (397)
T ss_dssp EEE-----EEEEEEET-TTTCSSEEEEEESCGGGGGGSEEEEEECT-------TTSTTEEE-EECCCSS---CTTSCEEE
T ss_pred EEE-----EEEEeeCC-CcccCEEEEEEEcCCCCCCCceEEEEEEc-------CCCCCeEe-ccCcccc---CcCCceeE
Confidence 999 99999999 899999999999865545568999999 8 78899999 8899999 99999999
Q ss_pred EEecceecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCc
Q 007513 242 LRFEHVRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPET 321 (600)
Q Consensus 242 v~fd~v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~ 321 (600)
|.||||+||.+++|+ ..|.++. .....+...|+.+++.++|+++++++.+++|+++|+|||+
T Consensus 215 v~fddv~Vp~~~~lg-----~~~~g~~------~~~~~~~~~r~~~aa~~lG~a~~al~~a~~~a~~R~~fg~------- 276 (397)
T 3mpi_A 215 LFLDNVKVPKENILG-----KPGDGAR------IVFGSLNHTRLSAAAGGVGLAQACLDAAIKYCNERRQFGK------- 276 (397)
T ss_dssp EEEEEEEEEGGGEES-----STTCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------
T ss_pred EEEeeEEECHHHcCC-----CCCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCC-------
Confidence 999999999999998 5555544 5667788999999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhccc
Q 007513 322 QVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGH 401 (600)
Q Consensus 322 ~i~~~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~ 401 (600)
||++||.+|++|++|.+.+++++++++++++.+++ +. .+....++++|+++++.+.++++.|+|+|||.
T Consensus 277 ~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~-------~~----~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~ 345 (397)
T 3mpi_A 277 PIGDFQMNQDMIAQMAVEVEAARLLAYKAAAAKDE-------GR----LNNGLDVAMAKYAAGEAVSKCANYAMRILGAY 345 (397)
T ss_dssp EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC----TEEHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC----CccHHHHHHHHHHHHHHHHHHHHHHHHHhCCe
Confidence 99999999999999999999999999999887752 11 23456788999999999999999999999999
Q ss_pred cccccCChhHHhhhhcccccccchhHHHHHHHH-HHH
Q 007513 402 GYLCSSGLPELFAVYVPACTYEGDNIVLLLQVA-RFL 437 (600)
Q Consensus 402 G~~~~~~l~~~~rd~~~~~~~eG~~~v~~~~ia-~~l 437 (600)
||+++++++++|||++...+++|++++++..|+ +.+
T Consensus 346 g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~l 382 (397)
T 3mpi_A 346 GYSTEYPVARFYRDAPTYYMVEGSANICKMIIALDQL 382 (397)
T ss_dssp GGSTTSHHHHHHHHTTHHHHSSSCHHHHHHHHHHHHH
T ss_pred eecCCCCHHHHHhhccceeeecCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999 766
No 28
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=100.00 E-value=2.1e-52 Score=444.98 Aligned_cols=354 Identities=20% Similarity=0.239 Sum_probs=297.8
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccCC----HHHHHHHHhhcC-------
Q 007513 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRLS----EEEASMLRSSVD------- 94 (600)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~~g~~~~~~~------- 94 (600)
..++||.++++++++|+.++.. + .....+........+|+.+.+.||. +++||.+.++.+
T Consensus 13 ~~~~e~~~l~~~~r~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~~~~GG~g~~~~~~~~~~ee 83 (392)
T 1siq_A 13 QLTTDEILIRDTFRTYCQERLM----P-----RILLANRNEVFHREIISEMGELGVLGPTIKGYGCAGVSSVAYGLLARE 83 (392)
T ss_dssp GSCHHHHHHHHHHHHHHHHHTH----H-----HHHHHHHHTCCCTHHHHHHHHTTCSSTTCEETTEECCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcC----c-----chHHHHhhCCCCHHHHHHHHhCCCCcccHHhhCCCCCCHHHHHHHHHH
Confidence 4568999999999999975321 0 0011111112335689999999874 567775543321
Q ss_pred -----Cch--hhHhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCCeEEEecC
Q 007513 95 -----EPA--FTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSP 167 (600)
Q Consensus 95 -----~~~--~~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~vlntp 167 (600)
.+. .+.+|..+++..|..+|+++|+++|||++.+|+.++|+++|||++|||+.+++|+|++++++|+|+||
T Consensus 84 l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~~~g~~ln-- 161 (392)
T 1siq_A 84 LERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLN-- 161 (392)
T ss_dssp HHTTCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEE--
T ss_pred HHHhCcHHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEECCCCCCcCccccEEEEEEeCCCCEEEEE--
Confidence 121 22345556677888999999999999999999999999999999999999999999998667899999
Q ss_pred CCCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccceeEEecce
Q 007513 168 TLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHV 247 (600)
Q Consensus 168 ~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fd~v 247 (600)
|+|+||+| +..||+++|+|++.. .++++|+|| .+.|||++.+.|+++| +++++++.|.||||
T Consensus 162 ---G~K~~vs~-~~~Ad~~~v~a~~~~----g~~~~flV~-------~~~pGv~v~~~~~~~G---~~~~~~~~v~fd~v 223 (392)
T 1siq_A 162 ---GTKTWITN-SPMADLFVVWARCED----GCIRGFLLE-------KGMRGLSAPRIQGKFS---LRASATGMIIMDGV 223 (392)
T ss_dssp ---EEEEEEET-GGGCSEEEEEEEETT----SCEEEEEEE-------TTCTTEECCBCCCCSS---STTSCEEEEEEEEE
T ss_pred ---EEEEeecC-CcccCEEEEEEEECC----CCEEEEEEe-------CCCCCeEecccccccc---ccCCceEEEEEccE
Confidence 99999999 899999999999741 248899999 7889999999999999 99999999999999
Q ss_pred ecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccchH
Q 007513 248 RIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYK 327 (600)
Q Consensus 248 ~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~i~~~q 327 (600)
+||.+++|+ .. .++. .....+...|+.+++.++|+++++++.+++|+++|+|||+ ||++||
T Consensus 224 ~Vp~~~~lg-----~~-~g~~------~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~-------~i~~~q 284 (392)
T 1siq_A 224 EVPEENVLP-----GA-SSLG------GPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGV-------PLARNQ 284 (392)
T ss_dssp EEEGGGBCT-----TC-CSSH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGGSH
T ss_pred EECHHHcCC-----cc-cCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCc-------chhhhH
Confidence 999999997 22 1222 4456777899999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhccccccccC
Q 007513 328 TQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCSS 407 (600)
Q Consensus 328 ~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G~~~~~ 407 (600)
.+||+|++|.+.+++++.+++++++.++. +. .....++++|.++++.+.++++.|+|+|||+||++++
T Consensus 285 ~vq~~la~~~~~~~~ar~~~~~aa~~~d~-------~~-----~~~~~~~~aK~~~~~~a~~v~~~a~q~~Gg~g~~~~~ 352 (392)
T 1siq_A 285 LIQKKLADMLTEITLGLHACLQLGRLKDQ-------DK-----AAPEMVSLLKRNNCGKALDIARQARDMLGGNGISDEY 352 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC-----cchHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCC
Confidence 99999999999999999999999887752 11 1344578999999999999999999999999999999
Q ss_pred ChhHHhhhhcccccccchhHHHHHHHHHHHHH
Q 007513 408 GLPELFAVYVPACTYEGDNIVLLLQVARFLMK 439 (600)
Q Consensus 408 ~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~ 439 (600)
+++++|||++...+++|++++++..+++.+++
T Consensus 353 ~l~r~~Rd~~~~~~~~G~~~~~~~~i~~~llg 384 (392)
T 1siq_A 353 HVIRHAMNLEAVNTYEGTHDIHALILGRAITG 384 (392)
T ss_dssp SHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHS
T ss_pred cHHHHHhhCcCCeeecCcHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999875
No 29
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=4.2e-52 Score=438.42 Aligned_cols=318 Identities=16% Similarity=0.186 Sum_probs=275.4
Q ss_pred HHHHHHHHHHccC-----CHHHHHHHHhhcC------------Cchhh--HhhHhchHHHHccCCCHHHHHhHHHHHhcc
Q 007513 69 AAYAWKRIIELRL-----SEEEASMLRSSVD------------EPAFT--DLHWGMFVPAIKGQGTDEQHQKWLPLAYKM 129 (600)
Q Consensus 69 ~~~~~~~~~~~g~-----~~~~~g~~~~~~~------------~~~~~--~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g 129 (600)
...+|+.+.+.|| |+++||.+.++.+ .+.++ .+|..+++..|. +|+++||++|||++.+|
T Consensus 26 ~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~-~g~~~q~~~~l~~~~~G 104 (366)
T 1r2j_A 26 PRDLLVRLGADGLLCAEVAAEHGGLGLGSRENGEFTAHVGSLCSSLRSVMTSQGMAAWTVQR-LGDAGQRATFLKELTSG 104 (366)
T ss_dssp CHHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH-HSCHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHHHChHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHhCC
Confidence 4568999999997 6788886644321 13232 344446677888 99999999999999999
Q ss_pred ceeeEEeccCCCCCCCCCCCceEEEEeCCCCeEEEecCCCCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEEEec
Q 007513 130 EIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLR 209 (600)
Q Consensus 130 ~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~vlntp~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~r 209 (600)
+ ++|+++|||++|||+.+++|+|+++ +|+|+|| |+|.||+| +..||+++|+|+++. .|+++|+||
T Consensus 105 ~-~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~ln-----G~K~~~s~-~~~Ad~~~v~a~~~~----~g~~~flV~-- 169 (366)
T 1r2j_A 105 K-LAAVGFSERQAGSDLSAMRTRVRLD--GDTAVVD-----GHKVWTTA-AAYADHLVVFGLQED----GSGAVVVVP-- 169 (366)
T ss_dssp --CEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEE-----EEEEEETT-TTTCSEEEEEEBCSS----SCCEEEEEE--
T ss_pred C-eeEEEeCCCCCCCchhhCEeEEEEe--CCEEEEE-----EEEecccC-CcccCEEEEEEEeCC----CceEEEEEE--
Confidence 9 9999999999999999999999998 7899999 99999999 899999999998742 278999999
Q ss_pred cCCCCCCCCCeEEeecCCccCCCCcCcccceeEEecceecCcCcccccccccCCCceeccCcchhhH-HhHHHHHHHHHH
Q 007513 210 SLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQMLMVSQVTREGKYVQSNVPRQLL-YGTMVYVRQTIV 288 (600)
Q Consensus 210 d~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fd~v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~-~~~l~~~r~~~~ 288 (600)
.+.|||++.+.|+++| +++++++.|.||||+||.+++|+ ..|.++. .. ...+..+|+.++
T Consensus 170 -----~~~~Gv~~~~~~~~~G---~r~~~~~~v~f~~v~Vp~~~~lg-----~~~~g~~------~~~~~~l~~~r~~~a 230 (366)
T 1r2j_A 170 -----ADTPGVRVERVPKPSG---CRAAGHADLHLDQVRVPAGAVLA-----GSGASLP------MLVAASLAYGRKSVA 230 (366)
T ss_dssp -----TTSTTEEEEECSSCSS---STTSCCEEEEEEEEEEEGGGBCT-----TTTSCTT------TTTHHHHHHHHHHHH
T ss_pred -----CCCCCeEecCCcCCcc---CCCCCeeEEEEeeEEEcHHHcCC-----CCCccHH------HHHHHHhhHHHHHHH
Confidence 7889999999999999 99999999999999999999998 5555443 44 567788999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 007513 289 ADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFST 368 (600)
Q Consensus 289 a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~i~~~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~ 368 (600)
+.++|+++++++.+++|+++|+|||+ ||++||.+||+|++|.+.+++++++++++++.+++ +.
T Consensus 231 a~~~G~a~~al~~a~~ya~~R~~fg~-------~i~~~q~v~~~la~~~~~~~~ar~~~~~aa~~~~~-------g~--- 293 (366)
T 1r2j_A 231 WGCVGILRACRTAAVAHARTREQFGR-------PLGDHQLVAGHIADLWTAEQIAARVCEYASDHWDE-------GS--- 293 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEETTE-------EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHC---------------
T ss_pred HHHHHHHHHHHHHHHHHHhcCccCCC-------chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CC---
Confidence 99999999999999999999999999 99999999999999999999999999999887652 10
Q ss_pred hhhhHHHHhhHHHHHHHHHHHHHHHHHHHhccccccccCChhHHhhhhcccccccchhHHHHHHHHHHHHH
Q 007513 369 LPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMK 439 (600)
Q Consensus 369 ~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G~~~~~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~ 439 (600)
.+....++++|.++++.+.++++.|+|+|||+||+++++++++|||++...+++|++++++..+++.+++
T Consensus 294 -~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~~~~G~~~~~~~~ia~~~lg 363 (366)
T 1r2j_A 294 -PEMVPATILAKHVAAERAAAGAATAAQVLASAGAREGHVVERAYRDAKLMEIIEGSSEMCRVMLAQHALA 363 (366)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGC--CCHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHTT
T ss_pred -CcchHHHHHHHHHHHHHHHHHHHHHHHhhCCeeecCCCcHHHHHHhccCceecCCHHHHHHHHHHHHHhc
Confidence 1234568999999999999999999999999999999999999999999999999999999999998874
No 30
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=100.00 E-value=4.5e-51 Score=440.96 Aligned_cols=370 Identities=15% Similarity=0.143 Sum_probs=299.7
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcc-cCCCHHHHHHHHHHHH--HHHHHHHHHccC-----CHHHHHHHHhhcCC--
Q 007513 26 AGSRHAFQVSDRIARLVASDPAFRKDNR-AMLSRKELFKNTLRKA--AYAWKRIIELRL-----SEEEASMLRSSVDE-- 95 (600)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~g~-----~~~~~g~~~~~~~~-- 95 (600)
..++||.++++++|+|++++........ ...+... ..+. ..+|+.+.+.|| |+++||.+.++...
T Consensus 6 ~~~~e~~~l~~~~r~f~~~~~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~ 80 (438)
T 3mkh_A 6 HLSASQKGTYQAARSLARNLLMPARQTYLQHPPNSP-----LRFQSTQPTYAAAVSAGILKGQISPAHGGTGGTLIESAI 80 (438)
T ss_dssp CCCHHHHHHHHHHHHHHHHTHHHHHHHHTTSCTTCH-----HHHHTTHHHHHHHHHTTTTGGGSCGGGTCCCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcCcHHHHHhhcccccc-----CcCCCcHHHHHHHHhCCCCCCCCCcccCCCCCCHHHHHH
Confidence 4578999999999999987532100000 0001111 0122 578999999997 68888876544221
Q ss_pred ----------chhhH-hhHhchHHHHccCCCHHHHHhHHHHHhcc--ceeeEEeccCCCCCC-----CCCCCceEEEEeC
Q 007513 96 ----------PAFTD-LHWGMFVPAIKGQGTDEQHQKWLPLAYKM--EIIGCYAQTELGHGS-----NVQGLETTATFDP 157 (600)
Q Consensus 96 ----------~~~~~-~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g--~~~~~~a~tE~~~Gs-----d~~~~~ttA~~d~ 157 (600)
+.++. ....++...|..+|+++ +++|||++++| +.++|+++|||++|| |+.+++|+|+++
T Consensus 81 v~eela~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~l~~~~~G~g~~~~~~a~tEp~~gs~~~~sd~~~~~t~A~~~- 158 (438)
T 3mkh_A 81 LVEECYSVEPSAALTIFATGLGLTPINLAAGPQ-HAEFLAPFLSGEGSPLASLVFSEPGGVANALEKGAPGFQTTARLE- 158 (438)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCGG-GHHHHGGGSSSCSCCCEEEECCCTTCCTTTTCTTSCCCSCEEEEE-
T ss_pred HHHHHHhhChhHHHHHHHhhHHHHHHHhhCCHH-HHHHHHHHhcCCCCceEEEEEccCCCCCCccccccccceeEEEEe-
Confidence 22211 12235566778899999 89999999986 589999999999998 689999999998
Q ss_pred CCCeEEEecCCCCccccccCCCCC-----CccEEEEEEEEcc------CCCCCceEEEEEEeccCCCCCCCCC-eEEeec
Q 007513 158 QTDEFVIHSPTLTSSKWWPGGLGK-----VSTHAVVYARLIT------DGQDHGVNGFIVQLRSLEDHSPLPG-ITIGDI 225 (600)
Q Consensus 158 ~~~~~vlntp~~~G~K~~i~~~a~-----~Ad~~lV~A~~~~------~~~~~g~~~flV~~rd~~~~~~~pG-v~v~~~ 225 (600)
+|+|+|| |+|+||+| +. .||+++|+|++.. .++..|+++|+||..+.+ ...|| |++.+.
T Consensus 159 -g~g~~ln-----G~K~~is~-a~~~~~~~Ad~~~v~a~~~~~~~~~~~~~~~g~~~flV~~~~~~--~~~pG~v~v~~~ 229 (438)
T 3mkh_A 159 -GDEWVIN-----GEKMWATN-CAGWDFKGCDLACVVCRDATTPLEEGQDPENKVMIILVTRADLD--RNGEGSFEVLRH 229 (438)
T ss_dssp -TTEEEEE-----EEECSCTT-TTCTTSSCCSEEEEEEEECSSCCCTTCCGGGGEEEEEEEHHHHH--HHCTTSEEEEEC
T ss_pred -CCEEEEE-----eEEEEecC-CCccccccCcEEEEEEEecCcccCcccCCCCceEEEEEecCccc--cCCCCcEEecCc
Confidence 8999999 99999999 65 7999999999853 123358999999942100 01488 999999
Q ss_pred CCccCCCCcCcccceeEEecceecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007513 226 GMKFGNGAYNTMDNGVLRFEHVRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRY 305 (600)
Q Consensus 226 ~~~~G~~~~~~~~~~~v~fd~v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~y 305 (600)
|+++| +++++++.|.||||+||.+++|+ ..|.++. .+...+..+|+.+++.++|+++++++.+++|
T Consensus 230 ~~~~G---~r~~~~~~v~fddv~VP~~~~lg-----~~~~g~~------~~~~~l~~~r~~~aa~~lG~a~~al~~a~~y 295 (438)
T 3mkh_A 230 VATPG---HTSVSGPHVRYTNVRVPTKNVLC-----PAGQGAK------VAFGAFDGSAVLVGAMGVGLMRAAFDAALKF 295 (438)
T ss_dssp CCCSS---CTTCCCCEEEEEEEEEEGGGEEE-----CTTTHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcC---CcCCCceEEEECcEEECHHHcCC-----CCCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 99999999999999999999998 5565554 6677788899999999999999999999999
Q ss_pred hhhhcccC-CCCCCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHH
Q 007513 306 SAVRRQFG-SKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTT 384 (600)
Q Consensus 306 a~~R~qfg-~~~~~~~~~i~~~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t 384 (600)
+++|+||| + ||++||.+|++|++|.+.+++++++++++++.+++ +. .........++++|++++
T Consensus 296 a~~R~~~g~~-------pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~-------~~-~~~~~~~~~~~~aK~~a~ 360 (438)
T 3mkh_A 296 AKEDNRGGAV-------PLLERQAFADLLSGVKIQTEAARALTWKAAHAMEN-------GP-GDYDARRELALAAKVFCS 360 (438)
T ss_dssp HHHCCTTCSS-------CGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CS-SCHHHHHHHHHHHHHHHH
T ss_pred HhhcEeCCCe-------eccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC-CcchhHHHHHHHHHHHHH
Confidence 99999999 7 99999999999999999999999999999988764 11 111223344678999999
Q ss_pred HHHHHHHHHHHHHhccccccccCChhHHhhhhcccccccchh-HHHHHHHHHHHHHH
Q 007513 385 TATADGIEECRKLCGGHGYLCSSGLPELFAVYVPACTYEGDN-IVLLLQVARFLMKT 440 (600)
Q Consensus 385 ~~a~~~~~~~~q~~GG~G~~~~~~l~~~~rd~~~~~~~eG~~-~v~~~~ia~~ll~~ 440 (600)
+.+.++++.|+|+|||+||+++++++++|||++...+++|++ +++++++++.+++.
T Consensus 361 e~a~~~~~~a~q~~Gg~G~~~~~~l~r~~Rda~~~~i~~Gt~~~v~~~~i~r~ll~~ 417 (438)
T 3mkh_A 361 EAAVKACTDVINAVGISAYDLQRPFSDLLNTAVVLPIFDGGNVGIRRRHLQQLMLKP 417 (438)
T ss_dssp HHHHHHHHHHHHHHGGGGGCTTSSHHHHHHHHTHHHHSSSCTTTTHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHhchhhccCCCcHHHHHHHhheeeeecCChHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999 99999999999974
No 31
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=100.00 E-value=5.7e-49 Score=424.53 Aligned_cols=365 Identities=15% Similarity=0.109 Sum_probs=293.0
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcc-cCCCHHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHHHhhc------
Q 007513 26 AGSRHAFQVSDRIARLVASDPAFRKDNR-AMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSV------ 93 (600)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~g~~~~~~------ 93 (600)
..++||.++++++++|++++........ ......+.++ ....+|+.+.+.|| |+++||.+.++.
T Consensus 5 ~~~~e~~~l~~~~r~f~~~~~~p~~~~~d~~~~~~~~~~----~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~ 80 (439)
T 2c12_A 5 KLSPSQLEARRHAQAFANTVLTKASAEYSTQKDQLSRFQ----ATRPFYREAVRHGLIKAQVPIPLGGTMESLVHESIIL 80 (439)
T ss_dssp CCCHHHHHHHHHHHHHHHHTGGGHHHHHTTCSSHHHHHH----TTHHHHHHHHHTTTTGGGSBGGGTCCBCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCChhHHHHhhcccccCCCC----ChHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHH
Confidence 3468999999999999987532100000 0001111111 12678999999997 677887654331
Q ss_pred ------CCchh--hHhhHhchHHHHccCCCHHHHHhHHHHHh--ccceeeEEeccCCCCCC-----CCCCCceEEEEeCC
Q 007513 94 ------DEPAF--TDLHWGMFVPAIKGQGTDEQHQKWLPLAY--KMEIIGCYAQTELGHGS-----NVQGLETTATFDPQ 158 (600)
Q Consensus 94 ------~~~~~--~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~--~g~~~~~~a~tE~~~Gs-----d~~~~~ttA~~d~~ 158 (600)
+.+.+ +..| .++...|..+|+++||++|||++. +|+.++|+++|||++|| |+.+++|+|+++
T Consensus 81 eela~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~~~G~~~~~~a~tEp~~Gs~~~~sd~~~~~t~A~~~-- 157 (439)
T 2c12_A 81 EELFAVEPATSITIVAT-ALGLMPVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQTTARKV-- 157 (439)
T ss_dssp HHHHTTCCTTHHHHHHH-HHHHHHHHHSSCHHHHHHHTGGGGSSCSCCCEEEECCCTTCSTTTTCTTSCCCSCEEEEE--
T ss_pred HHHHhhChHHHHHHHHh-HHHHHHHHHhCCHHHHHHHHHHHhhcCCCEEEEEEecCCCCCCCccccccccceeEEEEc--
Confidence 11222 2234 355667889999999999999999 69999999999999998 588899999998
Q ss_pred CCeEEEecCCCCccccccCCCCC-----CccEEEEEEEE-c----cC----CCCCceEEEEEEeccCCCCCCCC------
Q 007513 159 TDEFVIHSPTLTSSKWWPGGLGK-----VSTHAVVYARL-I----TD----GQDHGVNGFIVQLRSLEDHSPLP------ 218 (600)
Q Consensus 159 ~~~~vlntp~~~G~K~~i~~~a~-----~Ad~~lV~A~~-~----~~----~~~~g~~~flV~~rd~~~~~~~p------ 218 (600)
+|+|+|| |+|+||+| +. .||+++|+|++ . .+ ++..|+++|+||. +.|
T Consensus 158 ~~g~~ln-----G~K~~is~-~~~~~~~~Ad~~~v~ar~~~~~~~~~~~~~~~~~g~~~flV~~-------~~pGv~~~~ 224 (439)
T 2c12_A 158 GNEWVIS-----GEKLWPSN-SGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAVLLVTR-------ETIANNKKD 224 (439)
T ss_dssp TTEEEEE-----EEEECCTT-TTTTTSSCCSEEEEEEEECSCTTSCCCTTSCGGGGEEEEEECH-------HHHHTSCGG
T ss_pred CCEEEEE-----eEEEeecC-CCccccccCcEEEEEEEcCCcccCccccccCCCCceEEEEEEC-------CCCcccCCC
Confidence 7899999 99999999 65 89999999998 5 22 3345899999994 446
Q ss_pred CeEEeecCCccCCCCcCcccceeEEecceecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHH
Q 007513 219 GITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRA 298 (600)
Q Consensus 219 Gv~v~~~~~~~G~~~~~~~~~~~v~fd~v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~a 298 (600)
||++.+.|+++| +++++++.|.||||+||.+++|+ ..|.++. . .....+...|+.+++.++|+++++
T Consensus 225 Gv~v~~~~~~~G---~r~~~~~~v~fddv~VP~~~~lg-----~~~~g~~----~-~~~~~l~~~r~~~aa~~~G~a~~a 291 (439)
T 2c12_A 225 AYQILGEPELAG---HITTSGPHTRFTEFHVPHENLLC-----TPGLKAQ----G-LVETAFAMSAALVGAMAIGTARAA 291 (439)
T ss_dssp GEEEEECCCBSS---CTTCCCCEEEEEEEEEEGGGBCS-----CTTHHHH----H-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEeCCcccccc---cCCCCceEEEEccEEecHHHcCC-----CCCccHH----H-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999 99999999999999999999997 4454331 0 244567789999999999999999
Q ss_pred HHHHHHHhhh-hcccCCCCCCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHh
Q 007513 299 VCIATRYSAV-RRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTA 377 (600)
Q Consensus 299 l~~a~~ya~~-R~qfg~~~~~~~~~i~~~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a 377 (600)
++.+++|+++ |+|||+ ||++||.+|++|++|.+.+++++++++++++.++. +.. ........++
T Consensus 292 l~~a~~ya~~rr~~~G~-------~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~-------~~~-~~~~~~~~~~ 356 (439)
T 2c12_A 292 FEEALVFAKSDTRGGSK-------HIIEHQSVADKLIDCKIRLETSRLLVWKAVTTLED-------EAL-EWKVKLEMAM 356 (439)
T ss_dssp HHHHHHHHHHCCTTSSS-------CGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-------TTS-CHHHHHHHHH
T ss_pred HHHHHHHHhhceeeCCe-------ehhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCc-cchhhHHHHH
Confidence 9999999996 789998 99999999999999999999999999999887641 111 0111344588
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccccccccCChhHHhhhhcccccccchh-HHHHHHHHHHHH
Q 007513 378 GLKSLTTTATADGIEECRKLCGGHGYLCSSGLPELFAVYVPACTYEGDN-IVLLLQVARFLM 438 (600)
Q Consensus 378 ~aK~~~t~~a~~~~~~~~q~~GG~G~~~~~~l~~~~rd~~~~~~~eG~~-~v~~~~ia~~ll 438 (600)
++|+++++.+.++++.|+|+|||+||+++++++++|||++...+++|++ ++++..+++.+.
T Consensus 357 ~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~G~~~~~~~~~i~~~l~ 418 (439)
T 2c12_A 357 QTKIYTTDVAVECVIDAMKAVGMKSYAKDMSFPRLLNEVMCYPLFDGGNIGLRRRQMQRVMA 418 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCGGGGBTTSSHHHHHHHHTTTTTSSSCTTTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCceEEcCCChHHHHHHhhhcceeecCChHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999988 799999887543
No 32
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=100.00 E-value=3.7e-48 Score=412.80 Aligned_cols=359 Identities=14% Similarity=0.063 Sum_probs=283.8
Q ss_pred cCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHH-HhhcC-----
Q 007513 26 AGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASML-RSSVD----- 94 (600)
Q Consensus 26 ~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~g~~-~~~~~----- 94 (600)
..++||.++++.+++|+.. +.. +....+....+..++|+.+.+.|| |+++||.+ .++.+
T Consensus 8 ~lt~e~~~~~~~~r~~~~~---~~~-------~a~~~d~~~~~p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~ 77 (395)
T 3mxl_A 8 PLTPAGRTVVDLLAGVIPR---ISA-------EAADRDRTGTFPVEAFEQFAKLGLMGATVPAELGGLGLTRLYDVATAL 77 (395)
T ss_dssp CCSHHHHHHHHHHTTTHHH---HHH-------HHHHHHHHTCCCHHHHHHHHHHTGGGCSSCTTTTSCCCCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH---Hhh-------chHHHhhhCCCCHHHHHHHHHCCCcCcCCChhhCCCCCcCHHHHHHHH
Confidence 3468999999999999853 111 111222222334578999998887 68888877 44321
Q ss_pred -------Cchh--hHhhHhchHHHH--ccCCCHHHH---HhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCC
Q 007513 95 -------EPAF--TDLHWGMFVPAI--KGQGTDEQH---QKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTD 160 (600)
Q Consensus 95 -------~~~~--~~~~~~l~~~~i--~~~Gt~eq~---~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~ 160 (600)
.+.+ +.+|..++...+ ..+|+++|| ++|||++.+|+.++|+++|||++|+ ..++|+ + +|
T Consensus 78 eel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~qk~~~~~~l~~~~~g~~~~~~a~tEp~~~~--~~~~t~---~--~~ 150 (395)
T 3mxl_A 78 MRLAEADASTALAWHVQLSRGLTLTYEWQHGTPPVRAMAERLLRAMAEGEAAVCGALKDAPGVV--TELHSD---G--AG 150 (395)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHTSCCEECCCSBCTTCC--CEEEEC---S--SS
T ss_pred HHHHhhCcHHHHHHHHHHHHHHHHHHHhhcCCHHHHhHHHHHHHHHhcCCcEEEEEecCCCCCC--CceEEe---c--CC
Confidence 1222 233443444333 356999999 9999999999999999999998763 333332 3 78
Q ss_pred eEEEecCCCCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccce
Q 007513 161 EFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNG 240 (600)
Q Consensus 161 ~~vlntp~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~ 240 (600)
+|+|| |+|+|||| +..||+++|+|+++.+++..|+++|+|| .+.|||++.+.|+++| +++++++
T Consensus 151 g~~ln-----G~K~~is~-a~~Ad~~~v~a~~~~~~~~~g~~~flV~-------~~~pGv~v~~~~~~~G---~r~~~~~ 214 (395)
T 3mxl_A 151 GWLLS-----GRKVLVSM-APIATHFFVHAQRRDDDGSVFLAVPVVH-------RDAPGLTVLDNWDGLG---MRASGTL 214 (395)
T ss_dssp CEEEE-----EEEEEETT-GGGCSEECCCEEEECTTSCEEEECCCEE-------TTCTTEEEECCCCBSS---CTTSCCE
T ss_pred EEEEe-----eEEEEecC-ccccCEEEEEEEeCCCCCCCceEEEEEE-------CCCCceEeCCCchhcC---CCCCCcc
Confidence 99999 99999999 8999999999998766556789999999 7889999999999999 9999999
Q ss_pred eEEecceecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCC
Q 007513 241 VLRFEHVRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPE 320 (600)
Q Consensus 241 ~v~fd~v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~ 320 (600)
.|.||||+||.+++|+.. +.|.+.. .....+..+|+.+++.++|+++++++.+++|++ |+
T Consensus 215 ~v~f~~v~Vp~~~~lg~~---~~g~g~~------~~~~~~~~~r~~~aa~~~G~a~~al~~a~~~a~-----~r------ 274 (395)
T 3mxl_A 215 EVVFDRCPVRADELLERG---PVGARRD------AVLAGQTVSSITMLGIYAGIAQAARDIAVGFCA-----GR------ 274 (395)
T ss_dssp EEEEEEEEECGGGCCEEE---ESSCCCT------THHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH-----TT------
T ss_pred eEEEcceEcCHHHhcCCC---CCCccHH------HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CC------
Confidence 999999999999999711 2233332 233335558899999999999999999999998 45
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC-hhhhHHHHhhHHHHHHHHHHHHHHHHHHHhc
Q 007513 321 TQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFST-LPEAHACTAGLKSLTTTATADGIEECRKLCG 399 (600)
Q Consensus 321 ~~i~~~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~G 399 (600)
||++||.+|++|++|.+.+++++.+++++++.++....... .+... .......++++|.++++.+.++++.|+|+||
T Consensus 275 -~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~-~~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~a~q~~G 352 (395)
T 3mxl_A 275 -GGEPRAGARALVAGLDTRLYALRTTVGAALTNADAASVDLS-GDPDERGRRMMTPFQYAKMTVNELAPAVVDDCLSLVG 352 (395)
T ss_dssp -CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-SCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc-cCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 89999999999999999999999999999988875432111 11110 1123456788999999999999999999999
Q ss_pred cccccccCChhHHhhhhcccc-cccchhHHHHHHHHHHHHH
Q 007513 400 GHGYLCSSGLPELFAVYVPAC-TYEGDNIVLLLQVARFLMK 439 (600)
Q Consensus 400 G~G~~~~~~l~~~~rd~~~~~-~~eG~~~v~~~~ia~~ll~ 439 (600)
|+||+++++++++|||++... +++|+++++++++++.+|+
T Consensus 353 g~g~~~~~~~~r~~Rda~~~~~~~~g~~~~~~~~ia~~~Lg 393 (395)
T 3mxl_A 353 GLAYTAGHPLSRLYRDVRAGGFMQPYSYVDAVDYLSGQALG 393 (395)
T ss_dssp GGGGBTTSHHHHHHHHGGGGGGCSSCCHHHHHHHHHHHHSC
T ss_pred hHhccCCCcHHHHHHHHHhccccCCCCHHHHHHHHHHHHhC
Confidence 999999999999999999999 9999999999999999874
No 33
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=100.00 E-value=9.8e-47 Score=404.08 Aligned_cols=356 Identities=11% Similarity=-0.043 Sum_probs=278.1
Q ss_pred CChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHHHhhcC-------
Q 007513 27 GSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------- 94 (600)
Q Consensus 27 ~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~g~~~~~~~------- 94 (600)
.++||.++++.+++|+.. +.. .....+........+|+.+.+.|| |+++||.+.++..
T Consensus 18 ~~~~~~~l~~~~r~~~~~---~~~-------~a~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~ee 87 (414)
T 2or0_A 18 YFQGMGRVLDRIEVVAEE---IRG-------QAVQSEADCRLTDAAAGLLRDSGAIRLLQPRLYGGYEVHPREFAETVMG 87 (414)
T ss_dssp -----CHHHHHHHHTHHH---HHH-------HHHHHHHHTSCCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHH---HHH-------hHHHHHhcCCCCHHHHHHHHHCCCchhcCchhhCCCCCCHHHHHHHHHH
Confidence 357888999999999863 111 011111111233568999998887 6888886644321
Q ss_pred -----Cchhh--HhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCCeEEEecC
Q 007513 95 -----EPAFT--DLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSP 167 (600)
Q Consensus 95 -----~~~~~--~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~vlntp 167 (600)
.+.++ ..| .++...|..+|+++||++|+| +|+.++|+++| | .|+|+++ +|+|+||
T Consensus 88 la~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~---~g~~~~a~a~t-p---------~t~A~~~--~~g~~ln-- 149 (414)
T 2or0_A 88 VAALDGASGWVTGIV-GVHPWELAFADPQVQEEIWGE---DNDTWMASPYA-P---------MGVATPV--DGGYVLK-- 149 (414)
T ss_dssp HHHHCHHHHHHHHHH-TTHHHHHTTSCHHHHHHHHSS---CTTCCEECCCS-C---------CEEEEEE--TTEEEEE--
T ss_pred HHhhChHHHHHHHHH-HHHHHHHHhCCHHHHHHHHcc---CCCeEEEeccC-C---------CceeEEE--CCeEEEE--
Confidence 12222 333 467788999999999999999 79999999998 4 6899998 7899999
Q ss_pred CCCccccccCCCCCCccEEEEEEEEccCCCCC---ceEEEEEEeccCCCCCCCCCeEEe-ecCCccCCCCcCcccceeEE
Q 007513 168 TLTSSKWWPGGLGKVSTHAVVYARLITDGQDH---GVNGFIVQLRSLEDHSPLPGITIG-DIGMKFGNGAYNTMDNGVLR 243 (600)
Q Consensus 168 ~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~---g~~~flV~~rd~~~~~~~pGv~v~-~~~~~~G~~~~~~~~~~~v~ 243 (600)
|+|+||+| +..||+++|+|++..+.+.. |+++|+|| .+ ||++. +.|+++| +++++++.|.
T Consensus 150 ---G~K~~is~-a~~Ad~~~v~a~~~~~~g~~~~~g~~~flV~-------~~--gv~v~~~~~~~~G---~r~~~~~~v~ 213 (414)
T 2or0_A 150 ---GRWSFSSG-TDHCQWAFLGAMVGDGEGGIATPSSLHVILP-------RT--DYQIVEDTWDVIG---LRGTGSKDLI 213 (414)
T ss_dssp ---EEEEEETT-GGGCSEEEEEEEECC-----CCCSEEEEEEE-------GG--GCEEETTCCCBSS---CGGGCCEEEE
T ss_pred ---eeEeccCC-CchhhEEEEEEEecCCCCCcccceeEEEEEE-------hh--hcEEecCCCcccc---CcccCCCcEE
Confidence 99999999 89999999999986432223 89999999 43 89999 9999999 9999999999
Q ss_pred ecceecCcCcccc-cccccC--CCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc-CCCCCCC
Q 007513 244 FEHVRIPRNQMLM-VSQVTR--EGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQF-GSKNGGP 319 (600)
Q Consensus 244 fd~v~VP~~~lL~-~~~v~~--~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qf-g~~~~~~ 319 (600)
||||+||.+++|+ ...+.. .|...... .. .....+...|+.+++.++|+++++++.+++|+++|+|| |+
T Consensus 214 fd~v~VP~~~~lg~~~~~~g~~~g~~~~~g-~~-~~~~~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~f~G~----- 286 (414)
T 2or0_A 214 VDGAFVPGYRTLNAAKVMDGRAQKEAGRPE-PL-FNMPYSCMFPLGITAAVIGITEGALACHIAVQKDRVAITGQ----- 286 (414)
T ss_dssp EEEEEEEGGGEEEHHHHHHSHHHHHHTCSC-SG-GGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCTTSC-----
T ss_pred EccEEecHHHeeccccccccCCCccccCCC-cc-ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-----
Confidence 9999999999997 211000 11000000 00 23345668899999999999999999999999999999 98
Q ss_pred CccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhc
Q 007513 320 ETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCG 399 (600)
Q Consensus 320 ~~~i~~~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~G 399 (600)
||++||.+|++|++|.+.+++++++++++++.+++.... +.. ...+....++++|+++++.+.++++.|+|+||
T Consensus 287 --~i~~~q~vq~~la~~~~~~~aar~l~~~aa~~~~~~~~~---g~~-~~~~~~~~~~~aK~~a~e~a~~v~~~a~q~~G 360 (414)
T 2or0_A 287 --KIKEDPYVLSAIGESAAEINASRVSLIETADRFYDKVDA---GKE-ITFEERAIGRRTQIAAAWRAVRAADEIFARAG 360 (414)
T ss_dssp --BGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred --ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999988743221 211 11235667899999999999999999999999
Q ss_pred cccccccCChhHHhhhhcccccccc-hhHHHHHHHHHHHHH
Q 007513 400 GHGYLCSSGLPELFAVYVPACTYEG-DNIVLLLQVARFLMK 439 (600)
Q Consensus 400 G~G~~~~~~l~~~~rd~~~~~~~eG-~~~v~~~~ia~~ll~ 439 (600)
|+||+++++++++|||++...+++| ++++++..+++.+|+
T Consensus 361 g~g~~~~~~l~r~~Rda~~~~~~~G~t~~~~~~~ia~~~lg 401 (414)
T 2or0_A 361 GGALHYKTPMQRFWRDAHAGLAHAVHVPGPTNHASALTQLG 401 (414)
T ss_dssp GGGGBTTSSHHHHHHHHHHHHTSGGGCCHHHHHHHHHHHTT
T ss_pred hHhhccCCchhHHHHHHHHHHcCCcccchHHHHHHHHHHhC
Confidence 9999999999999999999999999 999999999999885
No 34
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=100.00 E-value=2.3e-46 Score=404.33 Aligned_cols=368 Identities=12% Similarity=0.060 Sum_probs=285.0
Q ss_pred CHHHHHHHHcCChhhHHHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHH-H
Q 007513 17 DVDEMKIVWAGSRHAFQVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASML-R 90 (600)
Q Consensus 17 ~~~~l~~~~~~~~e~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~g~~-~ 90 (600)
++.+|++ ..++||.++++.+++|+.. +.. +....+.......++|+.+.+.|| |+++||.+ .
T Consensus 12 ~~~~m~~--~lt~e~~~l~~~~r~~~~~---~~~-------~a~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~gl~ 79 (439)
T 3m9v_A 12 STTGLYA--PVTPAGRVLLDRLAAHLPR---IRS-------TAAEHDRDGTFPTDTFDALRKDGLMGATVPAELGGLGVD 79 (439)
T ss_dssp CCSTTSS--CSSHHHHHHHHHHHTTHHH---HHH-------HHHHHHHHTCCCHHHHHHHHHTTGGGTTSCGGGTSCCCC
T ss_pred CCCCCCC--CCCHHHHHHHHHHHHHHHH---Hhh-------hHHHHHhcCCCCHHHHHHHHHCCCccCCCChhhCCCCCC
Confidence 5556655 4568999999999999853 110 111222222234578999998886 78888876 4
Q ss_pred hhcC------------Cchh--hHhhHhchHHHH--ccCCCHHH---HHhHHHHHhccceeeEEeccCCCCCCCCCCCce
Q 007513 91 SSVD------------EPAF--TDLHWGMFVPAI--KGQGTDEQ---HQKWLPLAYKMEIIGCYAQTELGHGSNVQGLET 151 (600)
Q Consensus 91 ~~~~------------~~~~--~~~~~~l~~~~i--~~~Gt~eq---~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~t 151 (600)
++.+ .+.+ +.+|..++...+ ..+|+++| |++|||++.+|++++|+++|||+++ +..++|
T Consensus 80 ~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~q~~~k~~~l~~l~~g~~~~~~a~tEp~~~--~~~~~t 157 (439)
T 3m9v_A 80 RLYDVAVALLAVARADASTALALHMQLSRGLTLGYEWRHGDERARTLAERILRGMVAGDAVVCSGIKDHHTA--VTTLRP 157 (439)
T ss_dssp CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTCCCEEEECEECTTC--CCEEEE
T ss_pred CHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCCCceEEEeecCCCCC--CCceee
Confidence 3321 1222 234433334333 35699999 8999999999999999999999863 444444
Q ss_pred EEEEeCCCCeEEEecCCCCccccccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCC
Q 007513 152 TATFDPQTDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGN 231 (600)
Q Consensus 152 tA~~d~~~~~~vlntp~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~ 231 (600)
+ + +|+|+|| |+|+|||| +.+||+++|+|+++.+++.+|+++|+|| .+.|||+|.+.|+++|
T Consensus 158 ~---~--~~g~vln-----G~K~~~s~-a~~Ad~~~v~art~~~~~~~g~~~flVp-------~~~pGv~i~~~~~~~G- 218 (439)
T 3m9v_A 158 D---G--AGGWLLS-----GRKTLVSM-APVGTHFVINARTDGTDGPPRLASPVVT-------RDTPGFTVLDNWDGLG- 218 (439)
T ss_dssp C---S--SSCEEEE-----EEEEEETT-GGGCSEEEECEEECC--CCCCEEEEEEE-------TTCTTEEECCCCCCSS-
T ss_pred c---c--CCEEEEE-----eEEEeecC-ccccCEEEEEEEecCCCCCceeEEEEEE-------CCCCCeEECCCcccCC-
Confidence 3 3 7899999 99999999 8999999999999766556789999999 7789999999999999
Q ss_pred CCcCcccceeEEecceecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 007513 232 GAYNTMDNGVLRFEHVRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQ 311 (600)
Q Consensus 232 ~~~~~~~~~~v~fd~v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~q 311 (600)
++++++++|.||||+||.+++|+.. +.|.+.. .....+..+|+.+++.++|+++++++.+++|++
T Consensus 219 --~~~~~~~~v~fddv~VP~~~~lg~~---~~g~g~~------~~~~~~~~~r~~~aa~~~G~a~~al~~a~~~a~---- 283 (439)
T 3m9v_A 219 --MRASGTVDIVFDDCPIPADHVLMRD---PVGARND------AVLAGQTVSSVSVLGVYVGVAQAAYDTAVAALE---- 283 (439)
T ss_dssp --CTTSCCEEEEEEEEEECGGGEEECC---C--CCCG------GGHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH----
T ss_pred --cCCCCceeEEEeeeEcCHHHccCCC---CCCchHH------HHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHc----
Confidence 9999999999999999999999711 2233332 223334458899999999999999999999998
Q ss_pred cCCCCCCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHH
Q 007513 312 FGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGI 391 (600)
Q Consensus 312 fg~~~~~~~~~i~~~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~ 391 (600)
|+ ||++||.+|++|+++.+.+++++.+++++++.++....................++++|+++++.+.+++
T Consensus 284 -~r-------~i~~~~~vq~~la~~~~~~~aar~l~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~ak~~a~~~a~~v~ 355 (439)
T 3m9v_A 284 -RR-------PEPPQAAALTLVAEIDSRLYALRATAGSALTAADALSADLSGDMDERGRQMMRHFQCAKLAVNRLAPEIV 355 (439)
T ss_dssp -TC-------SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CC-------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 44 8999999999999999999999999999988877533211000000011234567789999999999999
Q ss_pred HHHHHHhccccccccCChhHHhhhhcccc-cccchhHHHHHHHHHHHHHH
Q 007513 392 EECRKLCGGHGYLCSSGLPELFAVYVPAC-TYEGDNIVLLLQVARFLMKT 440 (600)
Q Consensus 392 ~~~~q~~GG~G~~~~~~l~~~~rd~~~~~-~~eG~~~v~~~~ia~~ll~~ 440 (600)
+.|+|+|||+||+++++++++|||++... +++|+++++++.+++.+|+.
T Consensus 356 ~~a~q~~Gg~G~~~~~~l~r~~Rda~~~~~~~~gt~~~~~~~i~~~~lg~ 405 (439)
T 3m9v_A 356 SDCLSLVGGASYTAGHPLARLLRDVQAGRFMQPYAYVDAVDFLSAQALGI 405 (439)
T ss_dssp HHHHHHHCGGGGSTTSHHHHHHHHTTGGGTSSSCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCHHHhcCCChHHHHHHHHHhhhhhCCCchHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999 99999999999999999863
No 35
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=100.00 E-value=3.7e-45 Score=401.15 Aligned_cols=323 Identities=18% Similarity=0.174 Sum_probs=273.2
Q ss_pred HHHHHHHHHccC-------CHHHHHHHHhh----------cCCchhhHhhHhchHHHHccCCCHHHHHhHHHHHhccce-
Q 007513 70 AYAWKRIIELRL-------SEEEASMLRSS----------VDEPAFTDLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEI- 131 (600)
Q Consensus 70 ~~~~~~~~~~g~-------~~~~~g~~~~~----------~~~~~~~~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~- 131 (600)
.++++.+.+.|| |+++||..... .....|..++. .++..|..+| ++|+++|+|++.+|+.
T Consensus 89 ~~~~~~l~e~Gl~~l~~~~p~~~Gg~~~~~~~~~~~~~~~~~~~~p~~~t~-~~~~~L~~~g-~eqk~~~lp~l~sge~~ 166 (541)
T 3djl_A 89 HLLMQALCTNRVHNLAWEEDARSGAFVARAARFMLHAQVEAGSLCPITMTF-AATPLLLQML-PAPFQDWTTPLLSDRYD 166 (541)
T ss_dssp HHHHHHHHHTTTTTGGGSTTCCTTHHHHHHHHHHHHHHHCSTTHHHHHHHH-HHHHHHHHHC-CGGGGGGHHHHTCSCCC
T ss_pred HHHHHHHHhCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHhhhcHHHHHH-HHHHHHHHcC-HHHHHHHHHHHhCCCcc
Confidence 446667777775 24566654322 11234555554 4667788889 9999999999999998
Q ss_pred ------------eeEEeccCCCCCCCCCCCceEEEEeCCCCeEEEecCCCCccccccCCCCCCccEEEEEEEEccCCCCC
Q 007513 132 ------------IGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGQDH 199 (600)
Q Consensus 132 ------------~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~vlntp~~~G~K~~i~~~a~~Ad~~lV~A~~~~~~~~~ 199 (600)
++|+++|||++|||+.+++|+|++++ +|+|+|| |+|+|+| +..||+++|+|+++ .
T Consensus 167 p~~~~~~~~~g~~~~~a~TEp~~GSDl~~~~T~A~~~~-~g~y~Ln-----G~K~f~S--a~~Ad~~lVlArt~-----~ 233 (541)
T 3djl_A 167 SHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLE-DGSYRLV-----GHKWFFS--VPQSDAHLVLAQTA-----G 233 (541)
T ss_dssp CCSSCGGGSSSCCEEEECCBTTBSSCGGGCCCEEEECT-TSCEEEE-----EEEEEEE--CTTSSEEEEEEEET-----T
T ss_pred cccccccccccceeEEEeccCCcCCCcccceeEEEEcC-CCeEEEE-----EEEEeec--ccccCEEEEEEEEC-----C
Confidence 88999999999999999999999874 4789999 9999998 57999999999973 5
Q ss_pred ceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccceeEEecceecCcCcccccccccCCCceeccCcchhhHHhH
Q 007513 200 GVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGT 279 (600)
Q Consensus 200 g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fd~v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~ 279 (600)
|+++|+||.+.++ ...+||++.+.|+|+| ++++++++|.|+||+ +++|+ +.|.++. .+...
T Consensus 234 Gis~flVp~~~p~--~~~~Gv~i~~~~~~~G---~rgt~s~~v~fddv~---~~llG-----~~g~G~~------~~~~~ 294 (541)
T 3djl_A 234 GLSCFFVPRFLPD--GQRNAIRLERLKDKLG---NRSNASCEVEFQDAI---GWLLG-----LEGEGIR------LILKM 294 (541)
T ss_dssp EEEEEEEESBCTT--SCBCSEEEEEECCCSS---CTTSCEEEEEEEEEE---EEEES-----STTCHHH------HTHHH
T ss_pred ceEEEEEecCCCC--CCcCCeEEeeccccCC---CcCCceeEEEEccce---eeeee-----cCCchHH------HHHHH
Confidence 8999999954322 1234999999999999 999999999999995 78887 6666654 66778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007513 280 MVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQ 359 (600)
Q Consensus 280 l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~i~~~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~ 359 (600)
+..+|+.+++.++|+++++++.+++|+++|+|||+ ||++||.+|++|+++.+.+++++.+++++++.++..
T Consensus 295 l~~~Rl~~aa~~~G~a~~al~~a~~ya~~R~~fG~-------~i~~~p~vq~~La~~~~~~eaaral~~~aa~~~d~~-- 365 (541)
T 3djl_A 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGN-------PLIQQPLMRHVLSRMALQLEGQTALLFRLARAWDRR-- 365 (541)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE-------EGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCCC-------chhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--
Confidence 88999999999999999999999999999999999 999999999999999999999999999998887631
Q ss_pred HhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhccccccccCChhHHhhhhcccccccchhHHHHHHHHHHHHH
Q 007513 360 RLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMK 439 (600)
Q Consensus 360 ~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G~~~~~~l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll~ 439 (600)
.+.......+..++++|+++++.+.+++++|+|+|||+||+++++++++|||++...+++|++++++..++|.+++
T Consensus 366 ----~~~~~~~~~~~~~~~aK~~ase~a~~~~~~a~q~~Gg~G~~~e~~l~r~~Rda~~~~i~eGt~ei~~~~i~r~l~~ 441 (541)
T 3djl_A 366 ----ADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLNK 441 (541)
T ss_dssp ----TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHH
T ss_pred ----CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeecCCCcHHHHHHhhhhhheeCCcHHHHHHHHHHHHHh
Confidence 0100011256778999999999999999999999999999999999999999999999999999999999999875
No 36
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=100.00 E-value=2e-45 Score=391.46 Aligned_cols=350 Identities=13% Similarity=0.038 Sum_probs=277.4
Q ss_pred HHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHHHhhcC------------C
Q 007513 33 QVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------------E 95 (600)
Q Consensus 33 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~g~~~~~~~------------~ 95 (600)
++++.+++|+.. +... ....+.......++|+.+.+.|| |+++||.+.++.. .
T Consensus 11 ~l~~~~~~~~~~---~~~~-------~~~~d~~~~~p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~ 80 (394)
T 2rfq_A 11 EVMQRLDALLPT---LRER-------AQETEDLRRIPDDSMKALQETGFFRLLQPEQWGGYQADPVLFYSAVRKIASACG 80 (394)
T ss_dssp HHHHHHHHHHHH---HHHT-------HHHHHHHTSCCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHH---HHHh-------HHHHHhcCCCCHHHHHHHHHCCCceecCchhhCCCCCCHHHHHHHHHHHHhhCh
Confidence 588888888853 1110 01112212234568999998887 6888886644321 1
Q ss_pred chhh--HhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCCeEEEecCCCCccc
Q 007513 96 PAFT--DLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSPTLTSSK 173 (600)
Q Consensus 96 ~~~~--~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~vlntp~~~G~K 173 (600)
+.++ ..| .++...|..+|+++|+++|+| +|+.++|+++| | .|+|+++ +|+|+|| |+|
T Consensus 81 ~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~---~g~~~~~~a~t-p---------~t~A~~~--~~g~~ln-----G~K 139 (394)
T 2rfq_A 81 STGWVSSII-GVHNWHLALFSQQAQEDVWGN---DTDVRISSSYA-P---------MGAGQVV--DGGYTVN-----GAW 139 (394)
T ss_dssp HHHHHHHHH-HHHHHHHTTSCHHHHHHHHSS---CTTCCEEEECS-C---------SEEEEEE--TTEEEEE-----EEE
T ss_pred hHHHHHHHH-HHHHHHHHhCCHHHHHHHhCC---CCCeEEEeccC-C---------CceEEEe--CCeEEEe-----eeE
Confidence 2232 233 366778889999999999999 79999999998 4 5899998 7899999 999
Q ss_pred cccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccceeEEecceecCcCc
Q 007513 174 WWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQ 253 (600)
Q Consensus 174 ~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fd~v~VP~~~ 253 (600)
+|||| +.+||+++|+|+++.+++.+|+++|+|| .+ ||++.+.|+++| +++++++.|.||||+||.++
T Consensus 140 ~~is~-a~~Ad~~~v~a~~~~~g~~~~~~~flV~-------~~--gv~v~~~~~~~G---~~~~~~~~v~fd~v~Vp~~~ 206 (394)
T 2rfq_A 140 AWSSG-CDHASWAVLGGPVIKDGRPVDFVSFLIP-------RE--DYRIDDVWNVVG---LRGTGSNTVVVEDVFVPTHR 206 (394)
T ss_dssp EEETT-GGGCSEEEEEEEEEETTEEEEEEEEEEE-------GG--GCEEECCCCBSS---CGGGCCEEEEEEEEEEEGGG
T ss_pred eccCC-CcccceEEEeeeecCCCCCCceeEEEEE-------hh--hcEEeCCccccc---cccCCCCceEEcceEcChHH
Confidence 99999 8999999999998544433589999999 33 899999999999 99999999999999999999
Q ss_pred ccc-cccccC--CCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc---ccCCCCCCCCccccchH
Q 007513 254 MLM-VSQVTR--EGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRR---QFGSKNGGPETQVIDYK 327 (600)
Q Consensus 254 lL~-~~~v~~--~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~---qfg~~~~~~~~~i~~~q 327 (600)
+|+ ...... .|...... .. .....+...|+.+++.++|+++++++.+++|+++|+ |||+ ||++||
T Consensus 207 ~lg~~~~~~g~~~g~~~~~g-~~-~~~~~~~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~~~~fG~-------~i~~~q 277 (394)
T 2rfq_A 207 VLSFKAMSNLTAPGLERNTA-PV-YKMPWGTIHPTTISAPIVGMAYGAYDAHVEHQGKRVRAAFAGE-------KAKDDP 277 (394)
T ss_dssp EEEHHHHHTTCCGGGTTCCC-GG-GGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTC-------GGGSCH
T ss_pred hcccccccccCCCCcccCCC-cc-ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCCCCCc-------ccccCH
Confidence 997 211000 12100000 00 223446678999999999999999999999999999 9999 999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhccccccccC
Q 007513 328 TQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCSS 407 (600)
Q Consensus 328 ~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G~~~~~ 407 (600)
.+|++|++|.+.+++++++++++++.+++.... +.. ...+....++++|.++++.+.++++.|+|+|||+||++++
T Consensus 278 ~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~---g~~-~~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~ 353 (394)
T 2rfq_A 278 FAKVRIAEASSDIDAAWRQLSGNVADEYALLVA---GEE-VPFELRLRARRDQVRATGRAISSIDKLFESSGATALANGT 353 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhhcCC
Confidence 999999999999999999999999988743221 111 1123566789999999999999999999999999999999
Q ss_pred ChhHHhhhhcccccccc-hhHHHHHHHHHHHHH
Q 007513 408 GLPELFAVYVPACTYEG-DNIVLLLQVARFLMK 439 (600)
Q Consensus 408 ~l~~~~rd~~~~~~~eG-~~~v~~~~ia~~ll~ 439 (600)
+++++|||++...+++| ++++++..+++.+|+
T Consensus 354 ~l~r~~Rda~~~~~~~g~~~~~~~~~i~~~llg 386 (394)
T 2rfq_A 354 PLQRFWRDAHAGRVHAANDPERAYVMYGTGEFG 386 (394)
T ss_dssp HHHHHHHHHHHHTTSGGGCHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHcccccCchhHHHHHHHHHhC
Confidence 99999999999999999 999999999999885
No 37
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=100.00 E-value=1.5e-45 Score=395.85 Aligned_cols=351 Identities=13% Similarity=0.027 Sum_probs=278.1
Q ss_pred HHHHHHHHHHhcCCCCCCCcccCCCHHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHHHhhcC------------C
Q 007513 33 QVSDRIARLVASDPAFRKDNRAMLSRKELFKNTLRKAAYAWKRIIELRL-----SEEEASMLRSSVD------------E 95 (600)
Q Consensus 33 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~g~~~~~~~------------~ 95 (600)
++++.+++|+.. +... ....+.......++|+.+.+.|| |+++||.+.++.. .
T Consensus 39 ~l~~~~r~~~~~---~~~~-------a~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~ 108 (422)
T 2jbr_A 39 SMLEKIQQILPQ---IAKN-------AESAEQLRRVPDENIKLLKEIGLHRAFQPKVYGGLEMSLPDFANCIVTLAGACA 108 (422)
T ss_dssp CHHHHHHHHHHH---HHHT-------HHHHHHHTSCCHHHHHHHHHTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHH---HHHh-------hHHHHHcCCCCHHHHHHHHHCCchhcCCchhcCCCCCCHHHHHHHHHHHHhhCc
Confidence 478888888752 1110 01111111233568999999887 6888886644321 1
Q ss_pred chhh--HhhHhchHHHHccCCCHHHHHhHHHHHhccceeeEEeccCCCCCCCCCCCceEEEEeCCCCeEEEecCCCCccc
Q 007513 96 PAFT--DLHWGMFVPAIKGQGTDEQHQKWLPLAYKMEIIGCYAQTELGHGSNVQGLETTATFDPQTDEFVIHSPTLTSSK 173 (600)
Q Consensus 96 ~~~~--~~~~~l~~~~i~~~Gt~eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~~~~~ttA~~d~~~~~~vlntp~~~G~K 173 (600)
+.++ ..| .+++..|..+|+++||++|+|+ |+.++|+++| | .|+|+++ +|+|+|| |+|
T Consensus 109 ~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~---g~~~~a~a~t-p---------~t~A~~~--~~g~~ln-----G~K 167 (422)
T 2jbr_A 109 GTAWAFSLL-CTHSHQIAMFSKQLQDEIWLKD---PDATASSSIA-P---------FGKVEEV--EGGIILN-----GDY 167 (422)
T ss_dssp HHHHHHHHH-HHHHHHHTTSCHHHHHHHHTTC---TTCCEEEECS-C---------CSEEEEE--TTEEEEE-----EEE
T ss_pred CHHHHHHHH-HHHHHHHHhCCHHHHHHHHccC---CCeEEEeecC-C---------CeeEEEe--CCEEEEe-----eeE
Confidence 3332 233 4667788999999999999996 8999999998 4 5899998 7899999 999
Q ss_pred cccCCCCCCccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCCcCcccceeEEecceecCcCc
Q 007513 174 WWPGGLGKVSTHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGAYNTMDNGVLRFEHVRIPRNQ 253 (600)
Q Consensus 174 ~~i~~~a~~Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fd~v~VP~~~ 253 (600)
+|||| +..||+++|+|++..+++..|+++|+|| .+ ||++.+.|+++| +++++++.|.||||+||.++
T Consensus 168 ~~is~-a~~Ad~~~v~a~~~~~~g~~g~~~flV~-------~~--gv~v~~~~~~~G---~r~~~~~~v~fddv~VP~~~ 234 (422)
T 2jbr_A 168 GWSSG-CDHAEYAIVGFNRFDADGNKIYSFGVIP-------RS--DYEIVDNWYAQA---IKSSGSKMLKLVNVFIPEYR 234 (422)
T ss_dssp EEETT-GGGCSEEEEEEEEECTTSCEEEEEEEEE-------GG--GCEEECCCCBSS---SGGGCCEEEEEEEEEEEGGG
T ss_pred eeecC-CccccEEEEEEEecCCCCCceeEEEEEE-------cC--ceEEeCCccccC---cCCCCCCcEEEeeEEecHHH
Confidence 99999 8999999999998643334589999999 43 899999999999 99999999999999999999
Q ss_pred ccc-ccccc--CCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--ccCCCCCCCCccccchHH
Q 007513 254 MLM-VSQVT--REGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRR--QFGSKNGGPETQVIDYKT 328 (600)
Q Consensus 254 lL~-~~~v~--~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~--qfg~~~~~~~~~i~~~q~ 328 (600)
+|+ ...+. ..|.+....... .....+..+|+.+++.++|+++++++.+++|+++|+ |||+ ||++||.
T Consensus 235 ~lg~~~~~~g~~~g~g~~~~~~~-~~~~~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~~fG~-------~i~~~q~ 306 (422)
T 2jbr_A 235 ISKAKDMMEGKSAGFGLYPDSKI-FYTPYRPYFASGFSAVSLGIAERMIEAFKEKQRNRVRAYTGA-------NVGLATP 306 (422)
T ss_dssp EEEHHHHHHTCSTTTTSCTTCSS-SSSCHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTCBCTTTCC-------BCTTCHH
T ss_pred eecccccccCCCCcccccCCCcc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-------ccccCHH
Confidence 998 21110 013220000000 233456778999999999999999999999999998 9999 9999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhccccccccCC
Q 007513 329 QQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCSSG 408 (600)
Q Consensus 329 ~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G~~~~~~ 408 (600)
+|++|++|.+.+++++++++++++.+++.... +.. ...+....++++|+++++.+.++++.|+|+|||+||+++++
T Consensus 307 vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~---g~~-~~~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~g~~~~~~ 382 (422)
T 2jbr_A 307 ALMRIAESTHQVAAARALLEKTWEDHRIHGLN---HQY-PNKETLAFWRTNQAYAVKMCIEAVDRLMAAAGATSFMDNSE 382 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGGBTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHhhhcCCc
Confidence 99999999999999999999999988743221 111 11234567899999999999999999999999999999999
Q ss_pred hhHHhhhhcccccccchh-HHHHHHHHHHHHH
Q 007513 409 LPELFAVYVPACTYEGDN-IVLLLQVARFLMK 439 (600)
Q Consensus 409 l~~~~rd~~~~~~~eG~~-~v~~~~ia~~ll~ 439 (600)
++++|||++...+++|++ ++++..+++.+|+
T Consensus 383 l~r~~Rda~~~~~~~G~~~e~~~~~ia~~~lg 414 (422)
T 2jbr_A 383 LQRLFRDAHMTGAHAYTDYDVCAQILGRELMG 414 (422)
T ss_dssp HHHHHHHHHHHTSSTTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCccchhHHHHHHHHHHhC
Confidence 999999999999999999 9999999999885
No 38
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=100.00 E-value=5.4e-34 Score=308.55 Aligned_cols=272 Identities=10% Similarity=0.063 Sum_probs=214.9
Q ss_pred CHHHHHhHHHHHhccceeeEEeccCCCCC--------CCCCCCceEEE-EeCCCCeEEEecCCCCccccccCCCCCCccE
Q 007513 115 TDEQHQKWLPLAYKMEIIGCYAQTELGHG--------SNVQGLETTAT-FDPQTDEFVIHSPTLTSSKWWPGGLGKVSTH 185 (600)
Q Consensus 115 t~eq~~~~l~~l~~g~~~~~~a~tE~~~G--------sd~~~~~ttA~-~d~~~~~~vlntp~~~G~K~~i~~~a~~Ad~ 185 (600)
.+|||++|||++.+|++++|+|+|||+.| ||+. +.|+++ +| +|+|||| |+|+|+|| ..||+
T Consensus 122 ~~eqk~~~L~~l~~Ge~~~a~a~TEP~~grs~~~s~gsd~~-~~~~~~~~~--gdg~Vln-----G~K~~iT~--~~Ad~ 191 (481)
T 2yyk_A 122 FAENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPDPY-IPVGVVKQT--EKGIVVR-----GARMTATF--PLADE 191 (481)
T ss_dssp GHHHHHHHHHHHHHHTCCEEEEECCCCCCTTC----CCCSC-SBCEEEEEC--SSEEEEE-----EEEEEEEC--CCSSE
T ss_pred HHHHHHHHHHHHHcCCeEEEEeeECCCCCCCCCccccCCcc-cceEEEEEE--CCEEEEE-----eEEEEecc--ccccE
Confidence 47999999999999999999999999876 6775 777775 45 8999999 99999998 79999
Q ss_pred EEEEEEEccC-CCCCceEEEEEEeccCCCCCCCCCeEEee--cCCc--------cCCCCcCc-ccceeEEecceecCcCc
Q 007513 186 AVVYARLITD-GQDHGVNGFIVQLRSLEDHSPLPGITIGD--IGMK--------FGNGAYNT-MDNGVLRFEHVRIPRNQ 253 (600)
Q Consensus 186 ~lV~A~~~~~-~~~~g~~~flV~~rd~~~~~~~pGv~v~~--~~~~--------~G~~~~~~-~~~~~v~fd~v~VP~~~ 253 (600)
++|+|+++.+ +...++++|+|| .+.|||++.. .+.+ +| .+. .+++.|.||||+||.++
T Consensus 192 ~iV~art~~~~~~~~~~s~flVp-------~dtpGv~v~~r~~~~~~~s~~d~~lg---~r~~~~~~~v~FddV~VP~e~ 261 (481)
T 2yyk_A 192 VLIFPSILLQAGSEKYALAFALP-------TSTPGLHFVCREALVGGDSPFDHPLS---SRVEEMDCLVIFDDVLVPWER 261 (481)
T ss_dssp EEECCCSCCCTTCGGGCEEEEEE-------TTCTTEEEEECCCCCCCSCTTTCTTT---TTCCCCEEEEEEEEEEEEGGG
T ss_pred EEEEEecCCCCCCCCeEEEEEEE-------CCCCCEEEEeccccccCCcccccccc---ccCCCCeEEEEEccEEECHHH
Confidence 9999997532 223468999999 8899999953 3322 34 453 67789999999999999
Q ss_pred ccccccccCCCceeccCcchhhH--HhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccchHHHHH
Q 007513 254 MLMVSQVTREGKYVQSNVPRQLL--YGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYKTQQN 331 (600)
Q Consensus 254 lL~~~~v~~~g~~~~~~~~~~~~--~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~i~~~q~~q~ 331 (600)
+|+.+ +.|.+.. .. ...+..+|+..++.++|.++.++.++.+|+.. | +|.+||.+|+
T Consensus 262 vl~~G---~~~~g~~------~~~~~~~l~~~r~~~~~~~~g~a~~~lg~a~~~~~~---~---------gi~~~q~vq~ 320 (481)
T 2yyk_A 262 VFILG---NVELCNN------AYGATGALNHMAHQVVALKTAKTEAFLGVAALMAEG---I---------GADVYGHVQE 320 (481)
T ss_dssp EEEES---CHHHHHH------HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---T---------TGGGSHHHHH
T ss_pred ccCCC---CccHHHH------HHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHh---c---------ChhhhHHHHH
Confidence 98310 2222211 12 45667899999999999999999999988864 2 5889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhccccccccCChhH
Q 007513 332 RLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCSSGLPE 411 (600)
Q Consensus 332 ~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G~~~~~~l~~ 411 (600)
+|++|.+.+++++++++++++..+. .+..........++++|.++++.+.++++.|+|+|||.|++ +|+++
T Consensus 321 ~laem~~~leaar~l~~~aa~~~d~-------~~~G~~~~~~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~--~p~e~ 391 (481)
T 2yyk_A 321 KIAEIIVYLEAMRAFWTRAEEEAKE-------NAYGLLVPDRGALDGARNLYPRLYPRIREILEQIGASGLIT--LPSEK 391 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCEE-------CTTSCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSC--CCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccc-------cccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHHhCccccc--CccHH
Confidence 9999999999999999999876431 01111112345689999999999999999999999998888 88888
Q ss_pred Hhhhhcccc------cccchhHHHHHHHHHHH
Q 007513 412 LFAVYVPAC------TYEGDNIVLLLQVARFL 437 (600)
Q Consensus 412 ~~rd~~~~~------~~eG~~~v~~~~ia~~l 437 (600)
+| +.+... ...|.+++++.+++|.+
T Consensus 392 ~~-~~~i~~~l~~~l~~~g~~~~~r~~i~rl~ 422 (481)
T 2yyk_A 392 DF-KGPLGPFLEKFLQGAALEAKERVALFRLA 422 (481)
T ss_dssp HH-HSTTHHHHHHHSCBTTBCHHHHHHHHHHH
T ss_pred Hh-ChhhhHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 88 774322 33599999999999854
No 39
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=5.4e-34 Score=308.96 Aligned_cols=274 Identities=12% Similarity=0.003 Sum_probs=210.3
Q ss_pred HHccCCC--HHHHHhHHHHHhccceeeEEeccCCCCC--------CCC-CCCceEEEEeCCCCeEEEecCCCCccccccC
Q 007513 109 AIKGQGT--DEQHQKWLPLAYKMEIIGCYAQTELGHG--------SNV-QGLETTATFDPQTDEFVIHSPTLTSSKWWPG 177 (600)
Q Consensus 109 ~i~~~Gt--~eq~~~~l~~l~~g~~~~~~a~tE~~~G--------sd~-~~~~ttA~~d~~~~~~vlntp~~~G~K~~i~ 177 (600)
.+..+|| +|||++|||++++|++++|+|+|||+.| ||+ ..+. +|+++ +|+|||| |+|+|+|
T Consensus 119 ~~~~~Gt~~~eqk~~~L~~l~~Ge~~~a~a~TEP~~~rs~~~~~gSD~~~~~~-~a~r~--gdg~vln-----G~K~~iT 190 (490)
T 1u8v_A 119 IDQKYGTNYHKNFTEYLKYIQENDLIVDGAMTDPKGDRGLAPSAQKDPDLFLR-IVEKR--EDGIVVR-----GAKAHQT 190 (490)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHTCCEEEECCCCCSCTTSCGGGCSSTTSSCE-EEEEC--SSEEEEE-----EEECSCT
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCceeeeeeeCCCCCCcccccccCCcccceE-EEEEE--CCEEEEE-----eEEEEee
Confidence 3458999 9999999999999999999999999874 775 3444 78877 8999999 9999999
Q ss_pred CCCCCccEEEEEEEEccC-CCCCceEEEEEEeccCCCCCCCCCeEEee---cCCc----------cCCCCc-Cc-cccee
Q 007513 178 GLGKVSTHAVVYARLITD-GQDHGVNGFIVQLRSLEDHSPLPGITIGD---IGMK----------FGNGAY-NT-MDNGV 241 (600)
Q Consensus 178 ~~a~~Ad~~lV~A~~~~~-~~~~g~~~flV~~rd~~~~~~~pGv~v~~---~~~~----------~G~~~~-~~-~~~~~ 241 (600)
| +..||+++|+|++..+ +...++.+|+|| .+.|||++.+ .+.+ +| . +. .+.+.
T Consensus 191 ~-a~~Ad~~iV~art~~~~~~~~~~s~flVp-------~d~pGv~v~~~r~~~~~~~~~~~~d~~lg---~~r~~~~~~~ 259 (490)
T 1u8v_A 191 G-SINSHEHIIMPTIAMTEADKDYAVSFACP-------SDADGLFMIYGRQSCDTRKMEEGADIDLG---NKQFGGQEAL 259 (490)
T ss_dssp T-CTTCSEEEECCSSCCCGGGGGGCEEEEEE-------TTCTTEEEEECCCTTGGGGGSTTCCGGGS---SSSCCCCCEE
T ss_pred C-CcccCEEEEEEecCCCCCCCCeEEEEEEE-------CCCCCEEEEecccccccccccccccCCcc---ccccCCceEE
Confidence 9 8999999999987532 222458899999 8899999953 4443 55 4 42 56788
Q ss_pred EEecceecCcCcccccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCc
Q 007513 242 LRFEHVRIPRNQMLMVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPET 321 (600)
Q Consensus 242 v~fd~v~VP~~~lL~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~ 321 (600)
|.||||+||.+++|+.+ ..|.+.. .....+...|+.+++.++|.+..++.++.+.... |
T Consensus 260 v~FddV~VP~e~vl~~g---~~~~g~~------~~~~~~~~~r~~~~a~~~~~~~~~lG~a~~~~~~---~--------- 318 (490)
T 1u8v_A 260 VVFDNVFIPNDRIFLCQ---EYDFAGM------MVERFAGYHRQSYGGCKVGVGDVVIGAAALAADY---N--------- 318 (490)
T ss_dssp EEEEEEEEEGGGEEEES---CGGGHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H---------
T ss_pred EEECceEeCHHHccCCC---ChhHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---c---------
Confidence 99999999999998411 2233222 3344555677777776666666666666543321 3
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhccc
Q 007513 322 QVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGH 401 (600)
Q Consensus 322 ~i~~~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~ 401 (600)
+|.++|.+|++|++|.+.+++++++++++++..+. .+..........++++|.++++.+.++++.++|+|||.
T Consensus 319 gi~~~q~vq~~laem~~~leaar~l~~~aa~~~d~-------~~~g~~~~~~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~ 391 (490)
T 1u8v_A 319 GAQKASHVKDKLIEMTHLNETLYCCGIACSAEGYP-------TAAGNYQIDLLLANVCKQNITRFPYEIVRLAEDIAGGL 391 (490)
T ss_dssp TCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCEE-------CTTSCEECCHHHHHHHHHHHTTHHHHHHHHHHHHHCTH
T ss_pred CchhcHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-------cccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 47899999999999999999999999999875431 01111112345689999999999999999999999999
Q ss_pred cccccCChhHHhhhh-cccccccchhHHHHH
Q 007513 402 GYLCSSGLPELFAVY-VPACTYEGDNIVLLL 431 (600)
Q Consensus 402 G~~~~~~l~~~~rd~-~~~~~~eG~~~v~~~ 431 (600)
||+ +|++++|||. +++.++|.....++.
T Consensus 392 g~~--~p~er~~rd~~~~~~~~~~~~~~l~~ 420 (490)
T 1u8v_A 392 MVT--MPSEADFKSETVVGRDGETIGDFCNK 420 (490)
T ss_dssp HHH--CCCHHHHTCCCBCSTTSCBHHHHHHH
T ss_pred hhc--ChHHHHHhCchhccccchhHHHHHHH
Confidence 998 8999999998 888888876655554
No 40
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=99.97 E-value=2.7e-29 Score=271.41 Aligned_cols=281 Identities=12% Similarity=0.004 Sum_probs=192.2
Q ss_pred CCC--HHHHHhHHHHHhccceeeEEeccCCCC--------CCCCCCCceEEEEeCCCCeEEEecCCCCccccccCCCCCC
Q 007513 113 QGT--DEQHQKWLPLAYKMEIIGCYAQTELGH--------GSNVQGLETTATFDPQTDEFVIHSPTLTSSKWWPGGLGKV 182 (600)
Q Consensus 113 ~Gt--~eq~~~~l~~l~~g~~~~~~a~tE~~~--------Gsd~~~~~ttA~~d~~~~~~vlntp~~~G~K~~i~~~a~~ 182 (600)
+|+ .+|+++|||++.+|++++|+|+|||+. |||+ .+.|++ .+ +|+|||| |+|+|||| +..
T Consensus 127 ~~~~~~eq~~~~L~~l~~Ge~~~a~AltEP~~~rs~~~~~GSD~-~~~~~~-~~--gdg~Vln-----G~K~~iT~-a~~ 196 (515)
T 3hwc_A 127 EGRNLTQNIHNFLKLLREKDLNCPLNFVDPQTDRSSDAAQARSP-NLRIVE-KT--DDGIIVN-----GVKAVGTG-IAF 196 (515)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCCCCEECCCCCCCCCSCTTTSCCS-BCEEEE-EC--SSEEEEE-----EEEEEEES-GGG
T ss_pred cCCCHHHHHHHHHHHHHcCCcEEEEEeeCCCCCcccccccCCCc-ceEEEE-EE--CCEEEEE-----EEEEEECC-ccc
Confidence 554 578899999999999999999999986 5788 665543 34 7899999 99999999 899
Q ss_pred ccEEEEEEEEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCC--cC-----cccceeEEecceecCcCccc
Q 007513 183 STHAVVYARLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGA--YN-----TMDNGVLRFEHVRIPRNQML 255 (600)
Q Consensus 183 Ad~~lV~A~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~--~~-----~~~~~~v~fd~v~VP~~~lL 255 (600)
||+++|+|++..+...+++++|+|| .+.|||++...+.++|... .+ +...+.|.||||+||.+++|
T Consensus 197 Ad~~lV~a~t~~~~~~~~~s~FlVp-------~d~pGv~v~~~~~~~G~~~~d~~ls~~~~~~~a~v~FddV~VP~e~vl 269 (515)
T 3hwc_A 197 GDYMHIGCLYRPGIPGEQVIFAAIP-------TNTPGVTVFCRESTVKNDPAEHPLASQGDELDSTTVFDNVFIPWEQVF 269 (515)
T ss_dssp CSEEEECCCCCTTCCGGGCEEEEEE-------TTCTTEEEEECCCCCCSCTTTCTTTTSCCCCEEEEEEEEEEEEGGGEE
T ss_pred cCEEEEEEEecCCCCCCeEEEEEEE-------CCCCCeEEeecccccCccccccccccccCCceEEEEECceEECHHHcc
Confidence 9999999987332222238999999 8899999987776665110 11 12378899999999999999
Q ss_pred ccccccCCCceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccchHHHHHHHHH
Q 007513 256 MVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYKTQQNRLFP 335 (600)
Q Consensus 256 ~~~~v~~~g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~i~~~q~~q~~la~ 335 (600)
+++ +.|.++. .+...+...+....+..+|.+..++..+.+++. +| +|++||.+|++|++
T Consensus 270 ~~G---e~g~g~~------~~~~~~~~~~r~~~~~~~~~a~~~lG~A~~~~e---~~---------gI~~fQ~Vq~kLAe 328 (515)
T 3hwc_A 270 HIG---NPEHAKL------YPQRIFDWVHYHILIRQVLRAELIVGLAILITE---HI---------GTSKLPTVSARVAK 328 (515)
T ss_dssp EES---CTTGGGT------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HH---------TCTTSHHHHHHHHH
T ss_pred CCC---CccHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---Hc---------CCcccHHHHHHHHH
Confidence 311 3333332 221222222111112334444445555544442 23 47899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhccccccccCC-------
Q 007513 336 LLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCSSG------- 408 (600)
Q Consensus 336 ~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G~~~~~~------- 408 (600)
|.+.+++++++++++++..+ ..+..........++++|.++++.+.++++.++|+|||.+++..+.
T Consensus 329 m~~~lEaaR~l~~~Aa~~~d-------~~~~G~~~p~~~~as~AK~~ase~~~rv~~~a~qi~GG~~i~~Ps~~d~~~pe 401 (515)
T 3hwc_A 329 LVAFHLAMQAHLIASEETGF-------HTKGGRYKPNPLIYDFGRAHFLQNQMSVMYELLDLAGRSSLMIPSEGQWDDSQ 401 (515)
T ss_dssp HHHHHHHHHHHHHHHHHTCE-------ECTTCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTSCCCHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHHhhc-------cccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeCCCHHHhcCch
Confidence 99999999999999877542 1111111123456899999999999999999999999999985332
Q ss_pred hhHHhhhhcccccccchhHHHHHHHHHHHH
Q 007513 409 LPELFAVYVPACTYEGDNIVLLLQVARFLM 438 (600)
Q Consensus 409 l~~~~rd~~~~~~~eG~~~v~~~~ia~~ll 438 (600)
+..++..............+-..+++..+.
T Consensus 402 ~~~~l~ky~~g~~~~a~~R~kl~rl~~d~~ 431 (515)
T 3hwc_A 402 SGQWFVKLNNGPKGNPRERVQIGRVIRDLY 431 (515)
T ss_dssp THHHHHHHTCCTTCCTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhCCCCCCHHHHHHHHHHHHHHh
Confidence 333333333333334444555555555554
No 41
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=99.90 E-value=7.1e-22 Score=213.83 Aligned_cols=254 Identities=10% Similarity=-0.028 Sum_probs=181.7
Q ss_pred HHHHhHHHHHhccceeeEEeccCCCCCCCC-----CCCceE-EEEeCCCCeEEEecCCCCccccccCCCCCCccEEEEEE
Q 007513 117 EQHQKWLPLAYKMEIIGCYAQTELGHGSNV-----QGLETT-ATFDPQTDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYA 190 (600)
Q Consensus 117 eq~~~~l~~l~~g~~~~~~a~tE~~~Gsd~-----~~~~tt-A~~d~~~~~~vlntp~~~G~K~~i~~~a~~Ad~~lV~A 190 (600)
+...+|+..+.+..+..+.++|.|...-.. ...-.. ...+ +|||||| |.|.|+|| +..||+++|++
T Consensus 134 ~n~~~y~~~~~~~DL~~~~a~~dPk~dRs~~~~~q~d~~l~Vve~~--~dGiVVn-----GaK~~~T~-a~~Ad~i~V~a 205 (517)
T 4g5e_A 134 KNIVDFVNFAKKHDLNCAPQFVDPQMDRSNPDAQQRSPGLRVIEKN--DKGIVVS-----GVKAIGTG-VAFADWIHIGV 205 (517)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCCCC-----------CBCEEEEEC--SSEEEEE-----EEEEEEES-GGGCSEEEECC
T ss_pred HHHHHHHHHHHhcCceeeeeeeCCCCCCCCCchhcCCCceEEEEEc--CCeEEEe-----eEehhhcC-ccccCEEEEEe
Confidence 445789999999999999999999532111 111112 2223 6899999 99999999 89999999999
Q ss_pred EEccCCCCCceEEEEEEeccCCCCCCCCCeEEeecCCccCCCC------cCcc-cceeEEecceecCcCcccccccccCC
Q 007513 191 RLITDGQDHGVNGFIVQLRSLEDHSPLPGITIGDIGMKFGNGA------YNTM-DNGVLRFEHVRIPRNQMLMVSQVTRE 263 (600)
Q Consensus 191 ~~~~~~~~~g~~~flV~~rd~~~~~~~pGv~v~~~~~~~G~~~------~~~~-~~~~v~fd~v~VP~~~lL~~~~v~~~ 263 (600)
++..+.+.++...|+|| .++|||++.......+.+. .++. ..+.|.||||+||.++++.++ +.
T Consensus 206 ~t~~~~~~d~~~~F~VP-------~dtPGv~~i~r~~~~~~~~~d~pl~~r~~e~da~vvFDdV~VP~e~Vf~~G---e~ 275 (517)
T 4g5e_A 206 FFRPGIPGDQIIFAATP-------VNTPGVTIVCRESVVKEDPIEHPLASQGDELDGMTVFDNVFIPWSHVFHLG---NP 275 (517)
T ss_dssp CCCTTCCGGGCEEEEEE-------TTCTTEEEEECCCCCCSCTTTCTTGGGCCCCEEEEEEEEEEEEGGGEEEES---CT
T ss_pred ecCCCCCccceEEEEEe-------cCCCCeEEEecccccCCCccccccccccCCcceEEEecceeccHHHccccC---Ch
Confidence 98765555678899999 8999999965444443110 1111 237799999999999988422 22
Q ss_pred CceeccCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCccccchHHHHHHHHHHHHHHHHH
Q 007513 264 GKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAF 343 (600)
Q Consensus 264 g~~~~~~~~~~~~~~~l~~~r~~~~a~~~g~~~~al~~a~~ya~~R~qfg~~~~~~~~~i~~~q~~q~~la~~~a~~~a~ 343 (600)
+.... .....+...|...++..++.+..++..+..++.. + .|.+||.+|++|++|++.++++
T Consensus 276 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~ae~---~---------Gi~~fq~Vq~kLaEm~~~~E~~ 337 (517)
T 4g5e_A 276 EHAKL------YPQRVFDWLHYHALIRQSVRAELMAGLAILITEH---I---------GTNKIPAVQTRVAKLIGFHQAM 337 (517)
T ss_dssp THHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H---------TCTTSHHHHHHHHHHHHHHHHH
T ss_pred hHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---h---------CCcccHHHHHHHHHHHHHHHHH
Confidence 32221 3445566777777778888888888888888753 3 3678999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhccccccccCChhHHhhh
Q 007513 344 RFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCSSGLPELFAV 415 (600)
Q Consensus 344 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~GG~G~~~~~~l~~~~rd 415 (600)
+++++.++... ...+..........++++|.++++...+++.+++|++||.|++. |-+..+++
T Consensus 338 ral~~aaa~~a-------~~~~~G~~~P~~~~a~~aK~~a~~~~~rv~~eaiqi~GG~g~~~--Pse~d~~~ 400 (517)
T 4g5e_A 338 LAHIVASEELG-------FHTPGGAYKPNILIYDFGRALYLENFSQMIYELVDLSGRSALIF--ASEDQWND 400 (517)
T ss_dssp HHHHHHHHHTC-------EECTTCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTCC--CCHHHHHC
T ss_pred HHHHHHHHHhc-------ccCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC--CCHHHhcC
Confidence 99988764321 11111111112456789999999999999999999999999984 44444444
No 42
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=90.59 E-value=2.1 Score=46.95 Aligned_cols=120 Identities=8% Similarity=-0.010 Sum_probs=79.4
Q ss_pred HHHHHHHhhhhcccCCCCCCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhh
Q 007513 299 VCIATRYSAVRRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAG 378 (600)
Q Consensus 299 l~~a~~ya~~R~qfg~~~~~~~~~i~~~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 378 (600)
+-.++.++.+| +|. .|.+-|.+..+|+++.+.+|++.+...++...+... + .+.......+
T Consensus 471 ~~~~~~~~~~~--~~~-------~~~~~q~~l~~~ad~~~~~y~~~~~~~r~~~~~~~~------~----~~~~~~~~~~ 531 (597)
T 3owa_A 471 GLMVAGLAAQK--YGK-------ALDKEQEILVNIADIVSNLYAMESAVLRTEKAIKTT------G----LEKNKQKVLY 531 (597)
T ss_dssp HHHHHHHHHHH--HGG-------GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------C----SGGGHHHHHH
T ss_pred HHHHHHHHHHH--hCC-------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc------C----ccchHHHHHH
Confidence 44455565555 355 788899999999999999999999998887665421 1 1233455678
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccccccCChhHHhhhhcccccccchh-HHHHHHHHHHHHH
Q 007513 379 LKSLTTTATADGIEECRKLCGGHGYLCSSGLPELFAVYVPACTYEGDN-IVLLLQVARFLMK 439 (600)
Q Consensus 379 aK~~~t~~a~~~~~~~~q~~GG~G~~~~~~l~~~~rd~~~~~~~eG~~-~v~~~~ia~~ll~ 439 (600)
+++||.+...++-..+.++. ..+...-.+..++...+-+.-+...| ..++.+||+.++.
T Consensus 532 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 591 (597)
T 3owa_A 532 TEVFCQEAFNEIEAHAKETL--IAVENGDMLRMMLSSLRKLTRHTPLNVIPKKREIAAKILE 591 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH--HhhccchHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHH
Confidence 99999999999999888887 33443333444444444443333333 4455666666654
No 43
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=56.51 E-value=75 Score=34.50 Aligned_cols=67 Identities=16% Similarity=0.051 Sum_probs=48.6
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChhhhHHHHhhHHHHHHHHHHHHHHHHHHHhc
Q 007513 322 QVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCG 399 (600)
Q Consensus 322 ~i~~~q~~q~~la~~~a~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~aK~~~t~~a~~~~~~~~q~~G 399 (600)
.+...|.+..||++++..+|++..+..++.+.+.. +. +.......+++.|+.+...++-..+.++..
T Consensus 509 ~~~~~~~~~~rl~d~~~~~y~~~~~l~r~~~~~~~-------g~----~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 575 (607)
T 2uxw_A 509 GIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLSE-------GH----PTAQHEKMLCDTWCIEAAARIREGMAALQS 575 (607)
T ss_dssp GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------TC----TTHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CC----cchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 67888999999999999999998888877655432 11 122233567888888888888777777443
No 44
>2k6o_A Cathelicidin antimicrobial peptide; human HOST defense peptide, human cathelicidin, LL-37, bacterial membrane targeting, antibiotic; NMR {Homo sapiens} PDB: 2lmf_A
Probab=26.09 E-value=80 Score=20.21 Aligned_cols=23 Identities=4% Similarity=0.157 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHhhcCcCC
Q 007513 578 AKQASLANEQLRSLYSQVFTCVK 600 (600)
Q Consensus 578 ~~q~~~i~~~~~~l~~~lr~~~~ 600 (600)
.+.++.|-+.|.+.+.+++|+.+
T Consensus 14 g~~~kkIgQkIKdFf~~l~pr~e 36 (37)
T 2k6o_A 14 GKEFKRIVQRIKDFLRNLVPRTE 36 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSCC
T ss_pred HHHHHHHHHHHHHHHHhhCcccc
Confidence 35678899999999999999865
Done!