Query 007515
Match_columns 600
No_of_seqs 624 out of 3508
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 03:40:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007515.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007515hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 4.7E-48 1.6E-52 411.6 35.8 333 3-348 7-371 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 1.4E-47 4.8E-52 407.9 34.2 295 40-346 9-303 (437)
3 4g8k_A 2-5A-dependent ribonucl 100.0 1.2E-41 4E-46 349.4 31.0 292 43-349 23-329 (337)
4 1wdy_A 2-5A-dependent ribonucl 100.0 4.8E-41 1.7E-45 335.2 29.9 266 44-314 4-283 (285)
5 4g8k_A 2-5A-dependent ribonucl 100.0 1E-40 3.5E-45 342.3 32.6 291 10-313 25-330 (337)
6 3utm_A Tankyrase-1; tankyrase, 100.0 5.9E-41 2E-45 345.2 28.8 313 6-347 20-335 (351)
7 1wdy_A 2-5A-dependent ribonucl 100.0 4E-40 1.4E-44 328.5 28.5 264 78-349 4-281 (285)
8 3d9h_A CDNA FLJ77766, highly s 100.0 9.5E-39 3.2E-43 319.7 25.6 257 42-346 12-279 (285)
9 2fo1_E LIN-12 protein; beta-ba 100.0 8.4E-40 2.9E-44 340.3 17.4 315 9-347 36-372 (373)
10 3d9h_A CDNA FLJ77766, highly s 100.0 8E-39 2.7E-43 320.2 23.0 243 7-256 12-263 (285)
11 2xai_A ASB-9, ankyrin repeat a 100.0 4.3E-38 1.5E-42 310.8 23.0 252 44-304 2-258 (261)
12 3ljn_A Hypothetical protein; a 100.0 7.8E-39 2.7E-43 332.0 16.7 279 39-346 14-314 (364)
13 2fo1_E LIN-12 protein; beta-ba 100.0 6.7E-39 2.3E-43 333.5 15.9 280 15-310 71-372 (373)
14 3ljn_A Hypothetical protein; a 100.0 2.5E-38 8.7E-43 328.1 19.5 254 72-347 13-270 (364)
15 3utm_A Tankyrase-1; tankyrase, 100.0 1.3E-37 4.4E-42 320.3 24.5 284 42-348 21-307 (351)
16 2xai_A ASB-9, ankyrin repeat a 100.0 2.1E-37 7.1E-42 305.9 21.3 238 78-326 2-247 (261)
17 1yyh_A HN1;, notch 1, ankyrin 100.0 3.4E-37 1.2E-41 302.9 20.8 227 73-304 4-243 (253)
18 1oy3_D Transcription factor in 100.0 8.9E-37 3.1E-41 304.2 19.8 261 39-326 3-267 (282)
19 1oy3_D Transcription factor in 100.0 3.7E-36 1.3E-40 299.7 21.9 267 3-295 2-269 (282)
20 3aji_A 26S proteasome non-ATPa 100.0 7.7E-36 2.6E-40 288.6 22.4 226 44-346 5-230 (231)
21 1k1a_A B-cell lymphoma 3-encod 100.0 4.7E-36 1.6E-40 291.9 19.9 165 41-236 5-172 (241)
22 3b7b_A Euchromatic histone-lys 100.0 2.3E-35 7.8E-40 286.5 24.6 231 72-341 4-234 (237)
23 3b7b_A Euchromatic histone-lys 100.0 4E-35 1.4E-39 284.8 25.0 225 40-269 6-231 (237)
24 1k1a_A B-cell lymphoma 3-encod 100.0 1.8E-35 6.2E-40 287.7 22.0 233 73-345 3-240 (241)
25 2dzn_A Probable 26S proteasome 100.0 8.7E-35 3E-39 280.5 26.0 220 45-269 2-226 (228)
26 3aji_A 26S proteasome non-ATPa 100.0 8E-35 2.7E-39 281.5 25.5 225 8-237 4-228 (231)
27 1yyh_A HN1;, notch 1, ankyrin 100.0 2.4E-35 8.1E-40 289.7 22.0 227 41-271 6-246 (253)
28 2dzn_A Probable 26S proteasome 100.0 1.4E-34 5E-39 279.0 23.0 222 79-342 2-226 (228)
29 3eu9_A Huntingtin-interacting 100.0 1.1E-33 3.6E-38 274.7 24.4 232 41-311 5-237 (240)
30 1s70_B 130 kDa myosin-binding 100.0 1.6E-34 5.5E-39 290.8 18.6 260 51-324 4-272 (299)
31 4b93_B Ankyrin repeat domain-c 100.0 8E-35 2.7E-39 288.2 15.6 216 41-260 7-230 (269)
32 4b93_B Ankyrin repeat domain-c 100.0 4.6E-35 1.6E-39 290.0 13.8 237 74-346 6-244 (269)
33 3kea_A K1L; tropism, ANK repea 100.0 3.3E-34 1.1E-38 286.6 19.9 223 72-348 24-248 (285)
34 3eu9_A Huntingtin-interacting 100.0 1.3E-33 4.6E-38 273.9 23.5 230 110-348 6-237 (240)
35 3kea_A K1L; tropism, ANK repea 100.0 5.7E-34 2E-38 284.9 19.7 199 139-351 24-225 (285)
36 1s70_B 130 kDa myosin-binding 100.0 1.7E-34 5.9E-39 290.5 16.0 275 16-305 4-285 (299)
37 2f8y_A Notch homolog 1, transl 100.0 1.2E-33 4.1E-38 271.7 20.1 215 90-309 2-216 (223)
38 1sw6_A Regulatory protein SWI6 100.0 3.2E-35 1.1E-39 300.0 5.4 260 44-325 22-324 (327)
39 2f8y_A Notch homolog 1, transl 100.0 6.8E-33 2.3E-37 266.4 20.4 214 21-238 2-215 (223)
40 2rfa_A Transient receptor pote 100.0 1.3E-31 4.5E-36 259.1 22.0 206 44-271 2-220 (232)
41 1ikn_D Protein (I-kappa-B-alph 100.0 2.9E-32 9.9E-37 264.6 11.7 222 40-293 3-228 (236)
42 1ikn_D Protein (I-kappa-B-alph 100.0 2.2E-32 7.6E-37 265.4 10.3 211 75-323 4-225 (236)
43 2rfa_A Transient receptor pote 100.0 9E-31 3.1E-35 253.2 20.5 202 78-310 2-223 (232)
44 1sw6_A Regulatory protein SWI6 100.0 1.4E-32 4.8E-37 280.4 7.5 255 20-295 29-327 (327)
45 3hra_A Ankyrin repeat family p 100.0 2E-30 6.7E-35 244.9 20.4 192 146-344 5-201 (201)
46 3hra_A Ankyrin repeat family p 100.0 5.3E-30 1.8E-34 241.9 22.6 193 43-237 3-201 (201)
47 2pnn_A Transient receptor pote 100.0 2.3E-30 7.9E-35 257.0 14.7 223 72-321 6-271 (273)
48 2pnn_A Transient receptor pote 100.0 1.5E-30 5.3E-35 258.3 13.4 210 40-270 8-255 (273)
49 2etb_A Transient receptor pote 100.0 2.3E-30 8E-35 254.4 14.5 204 45-271 2-244 (256)
50 2etb_A Transient receptor pote 100.0 5E-30 1.7E-34 252.0 14.9 205 78-309 1-246 (256)
51 4gpm_A Engineered protein OR26 100.0 4.3E-29 1.5E-33 228.6 18.9 158 149-312 7-164 (169)
52 4gpm_A Engineered protein OR26 100.0 3.4E-28 1.1E-32 222.6 18.4 157 47-206 6-162 (169)
53 3jxi_A Vanilloid receptor-rela 100.0 3.3E-29 1.1E-33 246.6 12.1 207 43-271 3-248 (260)
54 3jxi_A Vanilloid receptor-rela 100.0 8.8E-29 3E-33 243.6 14.6 207 76-309 2-250 (260)
55 2aja_A Ankyrin repeat family p 100.0 1.8E-30 6.1E-35 268.0 1.9 263 46-337 66-365 (376)
56 3v30_A DNA-binding protein rfx 100.0 9.2E-28 3.2E-32 220.7 15.2 170 146-320 2-171 (172)
57 4hbd_A KN motif and ankyrin re 99.9 1.3E-27 4.4E-32 237.6 15.6 195 46-270 77-272 (276)
58 3v30_A DNA-binding protein rfx 99.9 7.6E-27 2.6E-31 214.6 15.3 168 46-250 3-170 (172)
59 4hbd_A KN motif and ankyrin re 99.9 5E-27 1.7E-31 233.3 14.8 188 116-307 79-273 (276)
60 2rfm_A Putative ankyrin repeat 99.9 2E-26 6.8E-31 215.9 16.9 161 40-237 30-190 (192)
61 1ihb_A P18-INK4C(INK6), cyclin 99.9 2.2E-26 7.5E-31 209.2 15.4 158 44-204 4-161 (162)
62 2rfm_A Putative ankyrin repeat 99.9 2.8E-26 9.7E-31 214.8 16.4 163 72-271 28-190 (192)
63 2aja_A Ankyrin repeat family p 99.9 6.1E-29 2.1E-33 256.5 -2.9 241 43-303 90-368 (376)
64 1ihb_A P18-INK4C(INK6), cyclin 99.9 4.1E-26 1.4E-30 207.3 16.1 157 147-309 6-162 (162)
65 3v31_A Ankyrin repeat family A 99.9 4E-26 1.4E-30 208.6 15.8 162 179-349 2-163 (167)
66 3v31_A Ankyrin repeat family A 99.9 4.6E-26 1.6E-30 208.2 15.7 158 44-238 2-159 (167)
67 3twr_A Tankyrase-2; ankyrin re 99.9 5.2E-26 1.8E-30 207.5 15.0 161 176-345 4-164 (165)
68 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.4E-25 4.9E-30 205.6 17.7 158 42-236 11-168 (169)
69 3f6q_A Integrin-linked protein 99.9 7.8E-26 2.7E-30 209.4 15.1 161 180-348 5-165 (179)
70 2y1l_E Darpin-8.4; hydrolase-i 99.9 3.3E-25 1.1E-29 203.1 18.7 153 148-306 16-168 (169)
71 3f6q_A Integrin-linked protein 99.9 2.1E-25 7.1E-30 206.5 16.5 167 146-317 5-171 (179)
72 2vge_A RELA-associated inhibit 99.9 7.1E-28 2.4E-32 232.4 -1.1 196 130-338 2-205 (229)
73 3twr_A Tankyrase-2; ankyrin re 99.9 1.4E-25 4.7E-30 204.7 13.1 159 42-203 5-163 (165)
74 1awc_B Protein (GA binding pro 99.9 5.7E-25 1.9E-29 198.0 16.8 150 46-233 3-152 (153)
75 2vge_A RELA-associated inhibit 99.9 1E-26 3.5E-31 224.3 4.5 204 95-304 1-208 (229)
76 1awc_B Protein (GA binding pro 99.9 9.8E-25 3.3E-29 196.4 17.0 151 10-165 2-152 (153)
77 1bd8_A P19INK4D CDK4/6 inhibit 99.9 7.4E-25 2.5E-29 197.7 15.8 153 45-201 2-154 (156)
78 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.4E-24 4.7E-29 196.0 16.1 153 79-235 2-154 (156)
79 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3.7E-26 1.3E-30 222.1 4.4 214 77-324 3-225 (239)
80 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.1E-24 3.6E-29 211.7 10.1 162 43-208 3-167 (239)
81 1bi7_B P16INK4A, MTS1, multipl 99.9 6.7E-24 2.3E-28 191.6 9.7 143 175-323 7-150 (156)
82 3t8k_A Uncharacterized protein 99.9 4.2E-23 1.4E-27 191.9 11.2 160 148-314 8-184 (186)
83 1d9s_A Cyclin-dependent kinase 99.9 7.6E-23 2.6E-27 180.1 10.9 128 210-346 8-136 (136)
84 1d9s_A Cyclin-dependent kinase 99.9 2.2E-22 7.6E-27 177.1 12.4 130 174-309 6-136 (136)
85 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.4E-21 4.9E-26 168.9 14.5 126 179-309 1-126 (126)
86 3t8k_A Uncharacterized protein 99.9 1.1E-22 3.6E-27 189.2 6.7 157 180-346 6-179 (186)
87 1bi7_B P16INK4A, MTS1, multipl 99.9 6E-22 2.1E-26 178.7 10.2 140 42-219 9-149 (156)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 2.1E-21 7.2E-26 170.8 12.8 126 177-307 11-136 (136)
89 3c5r_A BARD-1, BRCA1-associate 99.8 1.9E-21 6.3E-26 171.4 10.3 127 210-344 6-132 (137)
90 2jab_A H10-2-G3; HER2, darpin, 99.8 6.4E-21 2.2E-25 167.7 13.1 125 42-168 11-135 (136)
91 1n0r_A 4ANK, 4 ankyrin repeats 99.8 1.5E-20 5.1E-25 162.4 15.0 122 45-168 2-123 (126)
92 3ui2_A Signal recognition part 99.8 4E-22 1.4E-26 194.1 2.1 44 178-222 109-152 (244)
93 3ui2_A Signal recognition part 99.8 1.3E-20 4.4E-25 183.4 11.6 139 78-237 44-183 (244)
94 3deo_A Signal recognition part 99.8 1.4E-20 4.7E-25 174.7 11.1 140 43-202 42-181 (183)
95 3ehr_A Osteoclast-stimulating 99.8 4.7E-21 1.6E-25 183.6 7.8 139 176-318 69-207 (222)
96 3c5r_A BARD-1, BRCA1-associate 99.8 7.9E-21 2.7E-25 167.3 8.5 128 175-307 5-132 (137)
97 3aaa_C Myotrophin, protein V-1 99.8 4.8E-20 1.6E-24 159.0 10.1 108 213-324 6-113 (123)
98 3deo_A Signal recognition part 99.8 3.2E-20 1.1E-24 172.2 9.3 111 77-223 42-152 (183)
99 2b0o_E UPLC1; arfgap, structur 99.8 1.6E-19 5.4E-24 181.1 12.2 143 77-227 149-299 (301)
100 3aaa_C Myotrophin, protein V-1 99.8 1.5E-19 5.3E-24 155.8 9.5 111 42-154 4-114 (123)
101 2b0o_E UPLC1; arfgap, structur 99.8 3.7E-19 1.3E-23 178.4 13.4 142 145-297 150-299 (301)
102 1dcq_A PYK2-associated protein 99.8 8.4E-19 2.9E-23 173.8 14.7 192 75-272 62-262 (278)
103 1dcq_A PYK2-associated protein 99.8 8.5E-19 2.9E-23 173.8 13.8 192 109-308 62-262 (278)
104 3ehr_A Osteoclast-stimulating 99.8 2.5E-19 8.5E-24 171.6 8.3 164 41-206 21-199 (222)
105 3jue_A Arfgap with coiled-coil 99.8 4.2E-18 1.4E-22 174.8 13.9 146 176-326 195-346 (368)
106 3jue_A Arfgap with coiled-coil 99.8 3E-18 1E-22 175.9 12.7 128 212-347 197-327 (368)
107 2l6b_A NR1C; ankyrin, consensu 99.8 1.9E-18 6.5E-23 146.9 9.2 108 210-321 5-112 (115)
108 3lvq_E ARF-GAP with SH3 domain 99.8 4.7E-18 1.6E-22 182.9 14.5 138 180-321 132-277 (497)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.7 7.9E-18 2.7E-22 137.3 11.4 93 44-138 1-93 (93)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.7 7.8E-18 2.7E-22 137.3 10.8 92 214-309 2-93 (93)
111 3lvq_E ARF-GAP with SH3 domain 99.7 3.3E-17 1.1E-21 176.2 13.8 128 80-208 133-268 (497)
112 2l6b_A NR1C; ankyrin, consensu 99.7 4.6E-17 1.6E-21 138.3 9.0 107 41-149 5-111 (115)
113 2zgd_A 3 repeat synthetic anky 99.6 3.4E-15 1.2E-19 125.6 9.9 92 39-132 18-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.6 8.8E-15 3E-19 123.1 9.3 91 175-267 19-109 (110)
115 3gvo_A Pumilio 2, pumilio homo 72.6 15 0.00052 36.3 9.8 122 6-127 33-159 (351)
116 3mkq_B Coatomer subunit alpha; 63.4 55 0.0019 28.6 10.1 133 9-168 7-140 (177)
117 4ev6_A Magnesium transport pro 53.8 32 0.0011 33.7 7.9 20 492-511 282-301 (339)
118 3k49_A MRNA-binding protein PU 50.8 42 0.0014 33.3 8.3 120 6-125 38-162 (369)
119 2iub_A CORA, divalent cation t 39.9 31 0.0011 34.2 5.3 20 492-511 306-325 (363)
120 1gp8_A Protein (scaffolding pr 39.3 18 0.00063 22.5 2.1 20 10-29 13-32 (40)
121 2knc_B Integrin beta-3; transm 34.2 81 0.0028 23.4 5.4 27 523-549 13-39 (79)
122 3gvo_A Pumilio 2, pumilio homo 29.8 1.1E+02 0.0039 29.8 7.5 89 6-94 69-160 (351)
123 2knc_A Integrin alpha-IIB; tra 28.4 75 0.0026 21.7 3.9 15 518-532 10-24 (54)
124 3a7m_A Flagellar protein FLIT; 28.2 31 0.001 28.2 2.4 61 10-70 17-77 (122)
125 3k49_A MRNA-binding protein PU 26.9 2.8E+02 0.0095 27.1 9.8 126 7-134 75-207 (369)
126 2f3y_B Voltage-dependent L-typ 25.2 50 0.0017 18.5 2.1 17 543-559 6-22 (26)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.7e-48 Score=411.58 Aligned_cols=333 Identities=28% Similarity=0.349 Sum_probs=217.8
Q ss_pred ccccCccccHHHHHHHHcCCHHHHHHHHhhchhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcH
Q 007515 3 IEAINPYMERHLFETILRGDTQAFLSLIQQDEAKIKQTVPGSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETP 82 (600)
Q Consensus 3 ~~~~~~~~~~~L~~A~~~gd~~~~~~ll~~~~~~l~~~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~Tp 82 (600)
++..+..+.++|+.|+..|+.+.++.+++.+.+. ...+..|.||||+||..|+.++|++|++.+.+ ++.++..|.||
T Consensus 7 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~--~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~ 83 (437)
T 1n11_A 7 GGGGGESGLTPLHVASFMGHLPIVKNLLQRGASP--NVSNVKVETPLHMAARAGHTEVAKYLLQNKAK-VNAKAKDDQTP 83 (437)
T ss_dssp --------CCHHHHHHHHTCHHHHHHHHHTTCCS--CCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCC-SSCCCTTSCCH
T ss_pred ccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCH
Confidence 4455566666777777777777777776654332 23344566666666666666666666666655 55566666666
Q ss_pred hHHHHHcCCHHHHHHHHhCCccccc--------------------------------ccCCCCCcHHHHHHHhCCHHHHH
Q 007515 83 LHEACREGRLNFVKLFVGIDPSVIY--------------------------------KLNRDNESVLYVACERGRLDVAK 130 (600)
Q Consensus 83 Lh~Aa~~g~~~iv~~Ll~~~~~~~~--------------------------------~~~~~g~tpL~~A~~~g~~e~v~ 130 (600)
||+|+..|+.++|++|++.++++.. ..+..|.||||+|+..|+.++++
T Consensus 84 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 163 (437)
T 1n11_A 84 LHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAE 163 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHH
Confidence 6666666666666666665554421 12334444555555555555555
Q ss_pred HHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCC
Q 007515 131 QLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLP 210 (600)
Q Consensus 131 ~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~ 210 (600)
+|++++.+++..+..+.||||.|+..|+.+++++|++.+.+.. ..+.+|.||||+|+..|+.+++++|++.++++.. .
T Consensus 164 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~ 241 (437)
T 1n11_A 164 LLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPH-SPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANA-E 241 (437)
T ss_dssp HHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSC-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-C
T ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-C
Confidence 5555554444444445555555555555555555555555443 4455566666666666666666666666666543 5
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHH
Q 007515 211 DNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHL 290 (600)
Q Consensus 211 d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~ 290 (600)
+..|.||||+|+..|+.+++++|++.+ ...+..+..|.||||+|+..|+.+++++|++. +..+|.+|..|+||||+
T Consensus 242 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~~~~g~t~L~~ 317 (437)
T 1n11_A 242 SVQGVTPLHLAAQEGHAEMVALLLSKQ-ANGNLGNKSGLTPLHLVAQEGHVPVADVLIKH---GVMVDATTRMGYTPLHV 317 (437)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHH---TCCTTCCCSSCCCHHHH
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHhcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC---CccCCCCCCCCCCHHHH
Confidence 666777777777777777777777765 34566677778888888888888888888776 55678888999999999
Q ss_pred HHhCCcHHHHHHHHhcCCCcccccCCCCCHHHHHhhhcCCcchhhHHHHHHHhccccc
Q 007515 291 ATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARRC 348 (600)
Q Consensus 291 A~~~~~~~iv~~Ll~~gad~n~~n~~G~T~l~~a~~~a~~~~~~~i~~~L~~~ga~~~ 348 (600)
|+..|+.+++++|+++|+++|.+|..|.|||++|.. .++.+++++|+++|+++.
T Consensus 318 A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~----~g~~~iv~~Ll~~ga~~~ 371 (437)
T 1n11_A 318 ASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQ----QGHTDIVTLLLKNGASPN 371 (437)
T ss_dssp HHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHTTCCSC
T ss_pred HHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHH----CChHHHHHHHHHCcCCCC
Confidence 999999999999999999999999999999998654 467889999999998754
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.4e-47 Score=407.87 Aligned_cols=295 Identities=29% Similarity=0.368 Sum_probs=223.3
Q ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHH
Q 007515 40 TVPGSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYV 119 (600)
Q Consensus 40 ~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~ 119 (600)
..+..|.||||+||..|+.++|++|++.+.+ ++..|..|.||||+|+..|+.+++++|++.++++. ..+..|.||||+
T Consensus 9 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~ 86 (437)
T 1n11_A 9 GGGESGLTPLHVASFMGHLPIVKNLLQRGAS-PNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN-AKAKDDQTPLHC 86 (437)
T ss_dssp ------CCHHHHHHHHTCHHHHHHHHHTTCC-SCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSS-CCCTTSCCHHHH
T ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-CCCCCCCCHHHH
Confidence 4567899999999999999999999999887 78899999999999999999999999999998874 458899999999
Q ss_pred HHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHH
Q 007515 120 ACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITREL 199 (600)
Q Consensus 120 A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 199 (600)
|+..|+.+++++|++++.+++..+..+.||||.|+..|+.++++.|++.+.+.. ..+..|.||||+|+..|+.+++++|
T Consensus 87 A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~g~t~L~~A~~~g~~~~v~~L 165 (437)
T 1n11_A 87 AARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQA-CMTKKGFTPLHVAAKYGKVRVAELL 165 (437)
T ss_dssp HHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCc-CCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999999999988888888889999999999999999998877765 5677788888888888888888888
Q ss_pred HhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCC
Q 007515 200 LKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANM 279 (600)
Q Consensus 200 l~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~ 279 (600)
++.++++.. .+..|.||||+|+..|+.+++++|++.+. ..+..+..|.||||+|+..++.+++++|++. +..+|.
T Consensus 166 l~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~ 240 (437)
T 1n11_A 166 LERDAHPNA-AGKNGLTPLHVAVHHNNLDIVKLLLPRGG-SPHSPAWNGYTPLHIAAKQNQVEVARSLLQY---GGSANA 240 (437)
T ss_dssp HHTTCCTTC-CCSSCCCHHHHHHHTTCHHHHHHHGGGTC-CSCCCCTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTC
T ss_pred HhCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHhCCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCC
Confidence 888877654 67777788888877777777777777663 4445556666777777777777777766665 334555
Q ss_pred CCCCCChHhHHHHhCCcHHHHHHHHhcCCCcccccCCCCCHHHHHhhhcCCcchhhHHHHHHHhccc
Q 007515 280 PDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGAR 346 (600)
Q Consensus 280 ~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad~n~~n~~G~T~l~~a~~~a~~~~~~~i~~~L~~~ga~ 346 (600)
+|..|.||||+|+..|+.+++++|++.|++++..|..|.|||++|.. .++.+++++|++.|++
T Consensus 241 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~----~~~~~~~~~Ll~~g~~ 303 (437)
T 1n11_A 241 ESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQ----EGHVPVADVLIKHGVM 303 (437)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHH----HTCHHHHHHHHHHTCC
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHH----cCCHHHHHHHHhCCcc
Confidence 55666666666666666666666666666666655556666555432 2334444555544444
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.2e-41 Score=349.37 Aligned_cols=292 Identities=23% Similarity=0.238 Sum_probs=254.5
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccC-CCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHH
Q 007515 43 GSLNTILHLTARFGHEELASEILKLCPEMVAAEN-EKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVAC 121 (600)
Q Consensus 43 ~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n-~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~ 121 (600)
..|+|+||.||+.|+.++|++||+.|++ ++.++ ..|.||||+||..|+.++|++|+++++++.. .+..+.+|++.++
T Consensus 23 ~~~~t~L~~Av~~g~~~~V~~LL~~Gad-vn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~-~~~~~~~~~~~~~ 100 (337)
T 4g8k_A 23 VEDNHLLIKAVQNEDVDLVQQLLEGGAN-VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL-RKKNGATPFILAA 100 (337)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHH
T ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCC-CCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhh-hccCCCchhHHHH
Confidence 3478999999999999999999999988 66665 4599999999999999999999999988754 5889999999999
Q ss_pred HhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccc---------cCCCCCChHHHHHHhcCc
Q 007515 122 ERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAW---------KKDLNGHTPLHLSCSKGH 192 (600)
Q Consensus 122 ~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~---------~~d~~g~tpLh~A~~~g~ 192 (600)
..+..+++..+++.+.+++..+..|.||||.|+..|+.++++.|++.+.++.. ..+..|.||||+|+..|+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~ 180 (337)
T 4g8k_A 101 IAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGH 180 (337)
T ss_dssp HHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTC
T ss_pred hcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCC
Confidence 99999999999999999988888899999999999999999999998876542 345679999999999999
Q ss_pred HHHHHHHHh-cCCCCCCCCCCCCCCHHHHHHHcCC----HHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHH
Q 007515 193 LEITRELLK-LDPDLSSLPDNEGRTPLHWAAIKGR----INIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYL 267 (600)
Q Consensus 193 ~~iv~~Ll~-~~~~~~~~~d~~g~tpL~~Aa~~g~----~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~L 267 (600)
.+++++|++ .|+++.. .|..|.||+|.++..++ .++++.|++.+ .+++.+|..|+||||+|+..++.+++++|
T Consensus 181 ~~~v~~LL~~~gad~n~-~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~g-ad~n~~d~~g~t~L~~a~~~~~~~~v~~L 258 (337)
T 4g8k_A 181 VEVLKILLDEMGADVNA-CDNMGRNALIHALLSSDDSDVEAITHLLLDHG-ADVNVRGERGKTPLILAVEKKHLGLVQRL 258 (337)
T ss_dssp HHHHHHHHHHSCCCTTC-CCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTT-CCTTCCCGGGCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHhccCCCcCc-cCCCCCcHHHHHHHHcCcccHHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHhhhhHHHHHH
Confidence 999999996 5788755 78999999998877544 35778888876 57788899999999999999999999999
Q ss_pred HHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCCCcccccCCCCCHHHHHhhhcCCcchhhHHHHHHHhcccc
Q 007515 268 METLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARR 347 (600)
Q Consensus 268 l~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad~n~~n~~G~T~l~~a~~~a~~~~~~~i~~~L~~~ga~~ 347 (600)
++.. +.++|.+|.+|+||||+|++.|+.++|++|+++|+|+|.. |||++|.. .++.+++++|+++||++
T Consensus 259 l~~~--~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A~~----~~~~~iv~~Ll~~GA~~ 327 (337)
T 4g8k_A 259 LEQE--HIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----DLVMTARR----NYDHSLVKVLLSHGAKE 327 (337)
T ss_dssp HTST--TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----CHHHHHHH----TTCHHHHHHHHHTTCCC
T ss_pred HHhc--CCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CHHHHHHH----cCCHHHHHHHHHCcCCC
Confidence 8753 4578999999999999999999999999999999999765 59999654 46788999999999987
Q ss_pred cC
Q 007515 348 CD 349 (600)
Q Consensus 348 ~~ 349 (600)
..
T Consensus 328 d~ 329 (337)
T 4g8k_A 328 DF 329 (337)
T ss_dssp --
T ss_pred CC
Confidence 53
No 4
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.8e-41 Score=335.22 Aligned_cols=266 Identities=24% Similarity=0.259 Sum_probs=219.6
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHh
Q 007515 44 SLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACER 123 (600)
Q Consensus 44 ~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~ 123 (600)
+|+|+||.|++.|+.++|++|++.+++.....+..|.||||+|+..|+.+++++|++.++++. ..+..|.||||+|+..
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~ 82 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV-LRKKNGATPFLLAAIA 82 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHc
Confidence 367888888888888888888888877333347778888888888888888888888887764 3477888888888888
Q ss_pred CCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccC---------CCCCChHHHHHHhcCcHH
Q 007515 124 GRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKK---------DLNGHTPLHLSCSKGHLE 194 (600)
Q Consensus 124 g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~---------d~~g~tpLh~A~~~g~~~ 194 (600)
|+.+++++|++++.+++..+..+.||||.|+..|+.+++++|++.+.++.... +..|.||||+|+..|+.+
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 162 (285)
T 1wdy_A 83 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVE 162 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHH
T ss_pred CCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHH
Confidence 88888888888888877777777788888888888888888888877665221 677889999999999999
Q ss_pred HHHHHHhc-CCCCCCCCCCCCCCHHHHHHHcCC----HHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHH
Q 007515 195 ITRELLKL-DPDLSSLPDNEGRTPLHWAAIKGR----INIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLME 269 (600)
Q Consensus 195 iv~~Ll~~-~~~~~~~~d~~g~tpL~~Aa~~g~----~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~ 269 (600)
++++|++. +.++.. .|..|.||||.|+..|+ .++++.|++.+ ..++.+|..|+||||+|+..|+.+++++|++
T Consensus 163 ~v~~Ll~~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 240 (285)
T 1wdy_A 163 VLKILLDEMGADVNA-CDNMGRNALIHALLSSDDSDVEAITHLLLDHG-ADVNVRGERGKTPLILAVEKKHLGLVQRLLE 240 (285)
T ss_dssp HHHHHHHTSCCCTTC-CCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTT-CCSSCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCc-cCCCCCCHHHHHHHccccchHHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHh
Confidence 99999987 777654 78889999999999888 88888888876 4677788888999999999999999999988
Q ss_pred hcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCCCccccc
Q 007515 270 TLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAIN 314 (600)
Q Consensus 270 ~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad~n~~n 314 (600)
.. +.+++.+|.+|+||||+|+..++.+++++|+++|++++.+|
T Consensus 241 ~~--g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d 283 (285)
T 1wdy_A 241 QE--HIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283 (285)
T ss_dssp SS--SCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred cc--CCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCccc
Confidence 32 55688888999999999999999999999999999988876
No 5
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1e-40 Score=342.35 Aligned_cols=291 Identities=19% Similarity=0.225 Sum_probs=256.6
Q ss_pred ccHHHHHHHHcCCHHHHHHHHhhchhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHc
Q 007515 10 MERHLFETILRGDTQAFLSLIQQDEAKIKQTVPGSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACRE 89 (600)
Q Consensus 10 ~~~~L~~A~~~gd~~~~~~ll~~~~~~l~~~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~ 89 (600)
..+.|+.|+..||.+.|+.|++.+.+ ++...+..|.||||+||..|+.++|++|++.+++ ++.++..+.+|++.++..
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~Gad-vn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~-~~~~~~~~~~~~~~~~~~ 102 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEGGAN-VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKNGATPFILAAIA 102 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHH
T ss_pred CChHHHHHHHcCCHHHHHHHHHCCCC-CCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCc-hhhhccCCCchhHHHHhc
Confidence 56789999999999999999998765 3344455699999999999999999999999988 888999999999999999
Q ss_pred CCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccc----------cCCCChHHHHHHhcCCH
Q 007515 90 GRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILE----------VDGLTTSLHVSAMAGHL 159 (600)
Q Consensus 90 g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~----------~~~~~t~Lh~A~~~g~~ 159 (600)
+...++..+++.+.++. ..|..|.|||++|+..|+.+++++|++++++++.. ...|.||||.|+..|+.
T Consensus 103 ~~~~~~~~~~~~~~~~~-~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~ 181 (337)
T 4g8k_A 103 GSVKLLKLFLSKGADVN-ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV 181 (337)
T ss_dssp TCHHHHHHHHTTTCCTT-CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCH
T ss_pred ccchhhHHhhhccchhh-hhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCH
Confidence 99999999999998874 45899999999999999999999999998876532 34567899999999999
Q ss_pred HHHHHHHhc-CccccccCCCCCChHHHHHHhcCc----HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 007515 160 DIVKELLEA-RQEFAWKKDLNGHTPLHLSCSKGH----LEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEIL 234 (600)
Q Consensus 160 ~~v~~Ll~~-~~~~~~~~d~~g~tpLh~A~~~g~----~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll 234 (600)
+++++|+++ +.+++ ..|..|.||||.++..++ .+++++|+++|++++. +|..|.||||+|+..|+.++++.|+
T Consensus 182 ~~v~~LL~~~gad~n-~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~-~d~~g~t~L~~a~~~~~~~~v~~Ll 259 (337)
T 4g8k_A 182 EVLKILLDEMGADVN-ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNV-RGERGKTPLILAVEKKHLGLVQRLL 259 (337)
T ss_dssp HHHHHHHHHSCCCTT-CCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTC-CCGGGCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHhccCCCcC-ccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHhhhhHHHHHHH
Confidence 999999976 55554 889999999998876543 4688999999999865 7999999999999999999999999
Q ss_pred hccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCCCcccc
Q 007515 235 SLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAI 313 (600)
Q Consensus 235 ~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad~n~~ 313 (600)
+.....++.+|..|+||||+|+++|+.+++++|++. ++++| +.||||+|+..++.++|++|+++||++|..
T Consensus 260 ~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~---GAd~n-----~~~~L~~A~~~~~~~iv~~Ll~~GA~~d~~ 330 (337)
T 4g8k_A 260 EQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR---GASTD-----CGDLVMTARRNYDHSLVKVLLSHGAKEDFH 330 (337)
T ss_dssp TSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTT---SCSST-----TCCHHHHHHHTTCHHHHHHHHHTTCCC---
T ss_pred HhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCCC-----CCCHHHHHHHcCCHHHHHHHHHCcCCCCCC
Confidence 987788999999999999999999999999999987 44444 457999999999999999999999999864
No 6
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=5.9e-41 Score=345.24 Aligned_cols=313 Identities=19% Similarity=0.233 Sum_probs=268.8
Q ss_pred cCccccHHHHHHHHcCCHHHHHHHHhhchhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHH
Q 007515 6 INPYMERHLFETILRGDTQAFLSLIQQDEAKIKQTVPGSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHE 85 (600)
Q Consensus 6 ~~~~~~~~L~~A~~~gd~~~~~~ll~~~~~~l~~~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~ 85 (600)
.+.+..+.|+.|+..|+.+.+++++.+..... ...+..|.||||+||..|+.++|++|++.+.+ ++.+|..|.||||+
T Consensus 20 ~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~ 97 (351)
T 3utm_A 20 TGEYKKDELLEAARSGNEEKLMALLTPLNVNC-HASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD-VHAKDKGGLVPLHN 97 (351)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTC-CCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHH
T ss_pred eccccchhHHHHHHcCCHHHHHHHHHhcCCCc-ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCcHHHH
Confidence 35567889999999999999999998754433 34567789999999999999999999999887 78889999999999
Q ss_pred HHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHH
Q 007515 86 ACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKEL 165 (600)
Q Consensus 86 Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~L 165 (600)
|+..|+.+++++|++.++++. ..+..|.||||+|+..|+.+++++|++++.+++..+..+.++++.|+..+..+.+...
T Consensus 98 A~~~g~~~iv~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~ 176 (351)
T 3utm_A 98 ACSYGHYEVTELLLKHGACVN-AMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYE 176 (351)
T ss_dssp HHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhh
Confidence 999999999999999988774 4588899999999999999999999999998888888888899999888777777665
Q ss_pred HhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHc---CCHHHHHHHHhccccccc
Q 007515 166 LEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIK---GRINIIDEILSLNLQSAE 242 (600)
Q Consensus 166 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~---g~~~~v~~Ll~~~~~~~~ 242 (600)
.. .+++..++..++.+.++.++........ .+..|.||||+|+.. ++.++++.|++.+ ..++
T Consensus 177 ~~-------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g-~~~~ 241 (351)
T 3utm_A 177 FK-------------GHSLLQAAREADLAKVKKTLALEIINFK-QPQSHETALHCAVASLHPKRKQVAELLLRKG-ANVN 241 (351)
T ss_dssp HH-------------HHHHHHHHHTTCHHHHHHHTTTCCTTCC-CTTTCCCHHHHHHHCCSTTHHHHHHHHHHTT-CCTT
T ss_pred hc-------------ccHHHHHHHhccHHHHHHHHHhhccccc-CCCCCCCHHHHHHHHhCccHHHHHHHHHHcC-CCcC
Confidence 53 2467888889999999999987765433 678899999999999 5689999999987 5678
Q ss_pred cccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCCCcccccCCCCCHHH
Q 007515 243 MRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALD 322 (600)
Q Consensus 243 ~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad~n~~n~~G~T~l~ 322 (600)
.+|..|+||||+|+..|+.+++++|++. +.++|.+|..|+||||+|+..|+.+++++|+++|+|++.+|..|.||++
T Consensus 242 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~ 318 (351)
T 3utm_A 242 EKNKDFMTPLHVAAERAHNDVMEVLHKH---GAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQ 318 (351)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhh
Confidence 8899999999999999999999999987 6789999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCcchhhHHHHHHHhcccc
Q 007515 323 VVESDASNSGALQIVPALEEAGARR 347 (600)
Q Consensus 323 ~a~~~a~~~~~~~i~~~L~~~ga~~ 347 (600)
+| ..+++++|.+.+...
T Consensus 319 ~a--------~~~~~~~l~~~~~~~ 335 (351)
T 3utm_A 319 MG--------NEAVQQILSESTPMR 335 (351)
T ss_dssp HS--------CHHHHHHHHHC----
T ss_pred hh--------hHHHHHHHHhccccc
Confidence 95 345888888876544
No 7
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4e-40 Score=328.55 Aligned_cols=264 Identities=20% Similarity=0.212 Sum_probs=245.1
Q ss_pred CCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcC
Q 007515 78 KMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAG 157 (600)
Q Consensus 78 ~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g 157 (600)
+|+||||.|++.|+.+++++|++.++++....+..|.||||+|+..|+.+++++|++++.+++..+..+.||||.|+..|
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 83 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAG 83 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC
Confidence 57899999999999999999999999887766888999999999999999999999999999888888999999999999
Q ss_pred CHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCC---------CCCCCCHHHHHHHcCCHH
Q 007515 158 HLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLP---------DNEGRTPLHWAAIKGRIN 228 (600)
Q Consensus 158 ~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~---------d~~g~tpL~~Aa~~g~~~ 228 (600)
+.+++++|++.+.++. ..|..|.||||+|+..|+.+++++|++.++++.... +..|.||||.|+..|+.+
T Consensus 84 ~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 162 (285)
T 1wdy_A 84 SVKLLKLFLSKGADVN-ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVE 162 (285)
T ss_dssp CHHHHHHHHHTTCCTT-CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHH
T ss_pred CHHHHHHHHHcCCCCC-ccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHH
Confidence 9999999999998876 778999999999999999999999999999876532 778999999999999999
Q ss_pred HHHHHHhccccccccccccccchhhHhHhcCc----hhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHH
Q 007515 229 IIDEILSLNLQSAEMRTIHGETVLHLTVKNNQ----YEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLL 304 (600)
Q Consensus 229 ~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~----~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll 304 (600)
++++|++..+...+..+..|+||||+|+..++ .+++++|++. +.++|.+|..|+||||+|+..++.+++++|+
T Consensus 163 ~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 239 (285)
T 1wdy_A 163 VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH---GADVNVRGERGKTPLILAVEKKHLGLVQRLL 239 (285)
T ss_dssp HHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHT---TCCSSCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHc---CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 99999998667888999999999999999999 8999999987 6678999999999999999999999999999
Q ss_pred h-cCCCcccccCCCCCHHHHHhhhcCCcchhhHHHHHHHhcccccC
Q 007515 305 K-LGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARRCD 349 (600)
Q Consensus 305 ~-~gad~n~~n~~G~T~l~~a~~~a~~~~~~~i~~~L~~~ga~~~~ 349 (600)
+ .|++++.+|..|.|||++|.. .++.+++++|++.|++...
T Consensus 240 ~~~g~~~~~~~~~g~t~l~~A~~----~~~~~i~~~Ll~~Ga~~~~ 281 (285)
T 1wdy_A 240 EQEHIEINDTDSDGKTALLLAVE----LKLKKIAELLCKRGASTDC 281 (285)
T ss_dssp HSSSCCTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHHSSCSCC
T ss_pred hccCCCccccCCCCCcHHHHHHH----cCcHHHHHHHHHcCCCCCc
Confidence 7 899999999999999999654 4678999999999998653
No 8
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=9.5e-39 Score=319.70 Aligned_cols=257 Identities=22% Similarity=0.292 Sum_probs=161.8
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHhCch----------hhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCC
Q 007515 42 PGSLNTILHLTARFGHEELASEILKLCPE----------MVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNR 111 (600)
Q Consensus 42 ~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~----------~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~ 111 (600)
...|.|+||+|+..|+.+.+..++..++. .+..+|..|.||||+||..|+.+++++|++.+.++. ..|.
T Consensus 12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~-~~~~ 90 (285)
T 3d9h_A 12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVN-IITA 90 (285)
T ss_dssp ------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSC-EECT
T ss_pred chHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CcCC
Confidence 45678888888888887666666554321 245566777777777777777777777777766653 3466
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcC
Q 007515 112 DNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKG 191 (600)
Q Consensus 112 ~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g 191 (600)
.|.||||+|+..|+.+++++|++++.+++ ..|..|+||||+|+..|
T Consensus 91 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~----------------------------------~~~~~g~t~L~~A~~~~ 136 (285)
T 3d9h_A 91 DHVSPLHEACLGGHLSCVKILLKHGAQVN----------------------------------GVTADWHTPLFNACVSG 136 (285)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCSS----------------------------------CCCTTCCCHHHHHHHHT
T ss_pred CCCCHHHHHHHCCcHHHHHHHHHCCCCCC----------------------------------CCCCCCCCHHHHHHHcC
Confidence 66777777776666666666666655443 44556666777777767
Q ss_pred cHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhc
Q 007515 192 HLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETL 271 (600)
Q Consensus 192 ~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~ 271 (600)
+.+++++|++.++++.. +.+|.||||+|+..|+.++++.|++.+ ..++..|..|+||||+|+..|+.+++++|++.
T Consensus 137 ~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~- 212 (285)
T 3d9h_A 137 SWDCVNLLLQHGASVQP--ESDLASPIHEAARRGHVECVNSLIAYG-GNIDHKISHLGTPLYLACENQQRACVKKLLES- 212 (285)
T ss_dssp CHHHHHHHHHTTCCSSC--SCTTSCHHHHHHHHTCHHHHHHHHHTT-CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHT-
T ss_pred HHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHC-
Confidence 77777777776666542 344677777777777777777777665 34566666777777777777777777777766
Q ss_pred ccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCCCcccccCCCCCHHHHHhhhcCCcchhhHHHHHHHh-ccc
Q 007515 272 NITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEA-GAR 346 (600)
Q Consensus 272 ~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad~n~~n~~G~T~l~~a~~~a~~~~~~~i~~~L~~~-ga~ 346 (600)
+.++| .|..|+||||+|+..++.+++++|+++|+|++.+|.+|+||+++|. +..+++++|++. |++
T Consensus 213 --ga~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~------~~~~~~~~Ll~~~~a~ 279 (285)
T 3d9h_A 213 --GADVN-QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP------PESPLAQLFLEREGAS 279 (285)
T ss_dssp --TCCTT-CCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC------TTSHHHHHHHHHC---
T ss_pred --CCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc------CccHHHHHHHHhhccC
Confidence 44455 3788999999999999999999999999999999999999999964 235788888887 554
No 9
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=8.4e-40 Score=340.30 Aligned_cols=315 Identities=17% Similarity=0.201 Sum_probs=219.8
Q ss_pred cccHHHHHHHHcCCHHHHHHHHhhchhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHH
Q 007515 9 YMERHLFETILRGDTQAFLSLIQQDEAKIKQTVPGSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACR 88 (600)
Q Consensus 9 ~~~~~L~~A~~~gd~~~~~~ll~~~~~~l~~~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~ 88 (600)
.+...|..++..|+.+.+..+++..... + .-.++++-+...|+.+++++++.. ..+..|.||||+|+.
T Consensus 36 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~g~~~~~~~~~~~------~~~~~g~t~L~~Aa~ 103 (373)
T 2fo1_E 36 SSQHSLLEASYDGYIKRQRNELQHYSLY-----P-NPQGYGNGNDFLGDFNHTNLQIPT------EPEPESPIKLHTEAA 103 (373)
T ss_dssp ----------------------------------------------------------------------CCCHHHHHHH
T ss_pred ccccccccccCCccccchhhhhhhhccc-----c-CccccCCCCCcccccccccccccc------CCCCCCccHHHHHhc
Confidence 3667788888888888888887655332 1 123566778888999998887654 346789999999999
Q ss_pred cCCHHHHHHHHhCCcccccccC-CCCCcHHHHHHHhCCHHHHHHHH--------hCCcccccccCCCChHHHHHHhcCCH
Q 007515 89 EGRLNFVKLFVGIDPSVIYKLN-RDNESVLYVACERGRLDVAKQLL--------NYSSLLILEVDGLTTSLHVSAMAGHL 159 (600)
Q Consensus 89 ~g~~~iv~~Ll~~~~~~~~~~~-~~g~tpL~~A~~~g~~e~v~~Ll--------~~~~~~~~~~~~~~t~Lh~A~~~g~~ 159 (600)
.++ ++++.|+..+ +. ..+ ..|.||||+|+..|+.+++++|+ +.+.+++..+..|.||||+|+..|+.
T Consensus 104 ~~~-~~~~~L~~~~--~n-~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~ 179 (373)
T 2fo1_E 104 GSY-AITEPITRES--VN-IIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRR 179 (373)
T ss_dssp SSS-CCCSCCSTTT--TT-TCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred CCc-hHHHHhcccc--cc-ccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChH
Confidence 554 7888876643 32 234 78999999999999988877776 78888888888899999999999999
Q ss_pred HHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcC---CCCCCCCCCCCCCHHHHHHHcC---CHHHHHHH
Q 007515 160 DIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLD---PDLSSLPDNEGRTPLHWAAIKG---RINIIDEI 233 (600)
Q Consensus 160 ~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~---~~~~~~~d~~g~tpL~~Aa~~g---~~~~v~~L 233 (600)
+++++|++.+.++. ..|..|.||||+|+..|+.+++++|++.+ .++.. .|..|.||||+|+..| +.++++.|
T Consensus 180 ~iv~~Ll~~ga~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~d~~g~t~L~~A~~~~~~~~~~~v~~L 257 (373)
T 2fo1_E 180 RLVAYLMKAGADPT-IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEE-LDRNGMTALMIVAHNEGRDQVASAKLL 257 (373)
T ss_dssp HHHHHHHHTTCCSC-CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSC-CCTTSCCHHHHHHHSCSTTHHHHHHHH
T ss_pred HHHHHHHHCCCCCc-ccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhh-cCCCCCCHHHHHHHhCCcchHHHHHHH
Confidence 99999999998886 77889999999999999999999999987 56544 7889999999999998 89999999
Q ss_pred Hhcccccc-------ccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhc
Q 007515 234 LSLNLQSA-------EMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKL 306 (600)
Q Consensus 234 l~~~~~~~-------~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ 306 (600)
++.+.+.. ...|..|.||||+|+..|+.+++++|++.. +.++|.+|.+|+||||+|+..|+.+++++|+++
T Consensus 258 l~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~--~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 335 (373)
T 2fo1_E 258 VEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEK--GSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQ 335 (373)
T ss_dssp HHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHS--CCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhc--CCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 99875422 135678999999999999999999999873 257899999999999999999999999999999
Q ss_pred CCCcccccCCCCCHHHHHhhhcCCcchhhHHHHHHHhcccc
Q 007515 307 GVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARR 347 (600)
Q Consensus 307 gad~n~~n~~G~T~l~~a~~~a~~~~~~~i~~~L~~~ga~~ 347 (600)
|++++.+|..|.|||++|.. .++.+++++|++.|+++
T Consensus 336 gad~~~~d~~g~t~l~~A~~----~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 336 GASVEAVDATDHTARQLAQA----NNHHNIVDIFDRCRPER 372 (373)
T ss_dssp TCCSSCCCSSSCCHHHHHHH----TTCHHHHHHHHTTC---
T ss_pred CCCccCCCCCCCCHHHHHHH----cCCHHHHHHHHhcCccc
Confidence 99999999999999999654 57889999999999864
No 10
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=8e-39 Score=320.25 Aligned_cols=243 Identities=21% Similarity=0.270 Sum_probs=149.7
Q ss_pred CccccHHHHHHHHcCCHHHHHHHHhhchhh---------hhccCCCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCC
Q 007515 7 NPYMERHLFETILRGDTQAFLSLIQQDEAK---------IKQTVPGSLNTILHLTARFGHEELASEILKLCPEMVAAENE 77 (600)
Q Consensus 7 ~~~~~~~L~~A~~~gd~~~~~~ll~~~~~~---------l~~~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~ 77 (600)
.++....+|.|+..|+.+.+.+++...+.. .....+..|.||||+||..|+.++|++|++.+.+ ++.+|.
T Consensus 12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~~~ 90 (285)
T 3d9h_A 12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA-VNIITA 90 (285)
T ss_dssp ------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCC-SCEECT
T ss_pred chHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCC
Confidence 356788999999999999999976654331 1234577899999999999999999999999887 889999
Q ss_pred CCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcC
Q 007515 78 KMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAG 157 (600)
Q Consensus 78 ~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g 157 (600)
.|.||||+|+..|+.+++++|++.++++. ..+..|.||||+|+..|+.+++++|++++.+++.... +.||||.|+..|
T Consensus 91 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-g~t~L~~A~~~g 168 (285)
T 3d9h_A 91 DHVSPLHEACLGGHLSCVKILLKHGAQVN-GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESD-LASPIHEAARRG 168 (285)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCT-TSCHHHHHHHHT
T ss_pred CCCCHHHHHHHCCcHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCC-CCCHHHHHHHcC
Confidence 99999999999999999999999998874 4588999999999999999999999998877653322 445666666666
Q ss_pred CHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcc
Q 007515 158 HLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLN 237 (600)
Q Consensus 158 ~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~ 237 (600)
+.+++++|++.+.++. ..|..|.||||+|+..|+.+++++|++.|+++. .+..|.||||+|+..|+.+++++|++.+
T Consensus 169 ~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 245 (285)
T 3d9h_A 169 HVECVNSLIAYGGNID-HKISHLGTPLYLACENQQRACVKKLLESGADVN--QGKGQDSPLHAVVRTASEELACLLMDFG 245 (285)
T ss_dssp CHHHHHHHHHTTCCTT-CCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT--CCBTTBCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 6666666665555544 445555555555555555555555555555543 2445555555555555555555555543
Q ss_pred ccccccccccccchhhHhH
Q 007515 238 LQSAEMRTIHGETVLHLTV 256 (600)
Q Consensus 238 ~~~~~~~~~~g~t~Lh~Av 256 (600)
.+++.+|..|+||||+|+
T Consensus 246 -ad~~~~d~~g~t~l~~A~ 263 (285)
T 3d9h_A 246 -ADTQAKNAEGKRPVELVP 263 (285)
T ss_dssp -CCTTCCCTTSCCGGGGSC
T ss_pred -CCCCCcCCCCCCHHHHhc
Confidence 233344444444444444
No 11
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=4.3e-38 Score=310.79 Aligned_cols=252 Identities=21% Similarity=0.274 Sum_probs=193.2
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHh
Q 007515 44 SLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACER 123 (600)
Q Consensus 44 ~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~ 123 (600)
+|.||||+||..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++.++++. ..|..|.||||+|+..
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~ 79 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWA-VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN-GVTADWHTPLFNACVS 79 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHc
Confidence 478999999999999999999998877 78888999999999999999999999999887764 4588899999999999
Q ss_pred CCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcC
Q 007515 124 GRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLD 203 (600)
Q Consensus 124 g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~ 203 (600)
|+.+++++|++++.+++.. ..+.||||.|+..|+.++++.|++.+.++. ..|..|.||||+|+..|+.+++++|++.|
T Consensus 80 ~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 157 (261)
T 2xai_A 80 GSWDCVNLLLQHGASVQPE-SDLASPIHEAARRGHVECVNSLIAYGGNID-HKISHLGTPLYLACENQQRACVKKLLESG 157 (261)
T ss_dssp TCHHHHHHHHHTTCCSSCS-CTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBTTTBCHHHHHHHTTCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHCCCCCCCC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-cCCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 9999999999988877643 336678888888888888888888877765 66777888888888888888888888888
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccc-----cccC
Q 007515 204 PDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNIT-----KLAN 278 (600)
Q Consensus 204 ~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~-----~~~n 278 (600)
++++ .+..|.||||+|+..|+.++++.|++.+ .+.+.+|..|+||||+|+.++ +++++|++..... ..++
T Consensus 158 ~~~~--~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-ad~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~~l~~~~~~~ 232 (261)
T 2xai_A 158 ADVN--QGKGQDSPLHAVARTASEELACLLMDFG-ADTQAKNAEGKRPVELVPPES--PLAQLFLEREGPPSLMQLCRLR 232 (261)
T ss_dssp CCTT--CCBTTBCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCGGGGSCTTC--THHHHHHHC-CCCCHHHHHHHH
T ss_pred CCCC--CCCCCCChHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCChhhhccccc--cHHHHHHhccCCccHHHHHHHH
Confidence 7775 3677788888888888888888888775 456677777888888877543 4677777653221 1344
Q ss_pred CCCCCCChHhHHHHhCCcHHHHHHHH
Q 007515 279 MPDNDGNTILHLATAGKLTTMVIYLL 304 (600)
Q Consensus 279 ~~d~~G~T~Lh~A~~~~~~~iv~~Ll 304 (600)
.+|..|+||||.|.+...++.++-++
T Consensus 233 ~r~~~g~t~l~~~~~~~~p~~l~~~l 258 (261)
T 2xai_A 233 IRKCFGIQQHHKITKLVLPEDLKQFL 258 (261)
T ss_dssp HHTTSCTTCGGGGGGSSSCHHHHHHH
T ss_pred HHHHhchhccccCcccCCcHHHHHHH
Confidence 55666677777666666555554443
No 12
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=7.8e-39 Score=331.97 Aligned_cols=279 Identities=18% Similarity=0.159 Sum_probs=219.0
Q ss_pred ccCCCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHH
Q 007515 39 QTVPGSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLY 118 (600)
Q Consensus 39 ~~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~ 118 (600)
...|..|.||||+||..|+.++|++|++.+.+ ++.+|..|.||||+|+..|+.++|++|++.+++.. +..|.||||
T Consensus 14 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~g~t~L~ 89 (364)
T 3ljn_A 14 IKSDDENMEKIHVAARKGQTDEVRRLIETGVS-PTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHS---LWHGQKPIH 89 (364)
T ss_dssp --CCHHHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCC---CBTTBCHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcc---ccCCCCHHH
Confidence 34567799999999999999999999999887 88999999999999999999999999999988542 358999999
Q ss_pred HHHHhCCHHHHHHHHhC----CcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcC--c
Q 007515 119 VACERGRLDVAKQLLNY----SSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKG--H 192 (600)
Q Consensus 119 ~A~~~g~~e~v~~Ll~~----~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g--~ 192 (600)
+|+..|+.+++++|++. +.+++...... .... .........|..|.||||+|+..| +
T Consensus 90 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~----------~~~~-------~~~~~~~~~~~~g~t~L~~A~~~g~~~ 152 (364)
T 3ljn_A 90 LAVMANKTDLVVALVEGAKERGQMPESLLNEC----------DERE-------VNEIGSHVKHCKGQTALHWCVGLGPEY 152 (364)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCC----------CCCC-------EEEETTEEEEESCCCHHHHHHHSCGGG
T ss_pred HHHHcCCHHHHHHHHHhccccCCCHHHHHhhc----------chHh-------hhhhccccCCCCCCCHHHHHHHcCCch
Confidence 99999999999999997 44332100000 0000 000011235677889999999999 8
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccc----cccccccccchhhHhHhcCchhHHHHHH
Q 007515 193 LEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQS----AEMRTIHGETVLHLTVKNNQYEAVKYLM 268 (600)
Q Consensus 193 ~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~----~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll 268 (600)
.+++++|++.|+++.. .|..|.||||+|+..|+.+++++|++.+++. ++..|..|+||||+|+..|+.+++++|+
T Consensus 153 ~~~v~~Ll~~ga~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 231 (364)
T 3ljn_A 153 LEMIKILVQLGASPTA-KDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFV 231 (364)
T ss_dssp HHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 9999999999888765 7888999999999999999999999877542 6778888999999999999999999998
Q ss_pred HhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCCCccc------------ccCCCCCHHHHHhhhcCCcchhhH
Q 007515 269 ETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNA------------INRKGYTALDVVESDASNSGALQI 336 (600)
Q Consensus 269 ~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad~n~------------~n~~G~T~l~~a~~~a~~~~~~~i 336 (600)
+. +.++|.+|.+|.||||+|+..|+.+++++|+++|++++. .+..|+||+.. +...++.+.
T Consensus 232 ~~---gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----aa~~~~~~~ 304 (364)
T 3ljn_A 232 EM---GIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVP----AAADPSKQE 304 (364)
T ss_dssp TT---TCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSC----SSCCHHHHH
T ss_pred Hc---CCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchh----hhhccCHHH
Confidence 87 667888999999999999999999999999988877644 56678888887 445555555
Q ss_pred HHHHHHhccc
Q 007515 337 VPALEEAGAR 346 (600)
Q Consensus 337 ~~~L~~~ga~ 346 (600)
+..|+..+++
T Consensus 305 v~~ll~~~~~ 314 (364)
T 3ljn_A 305 VLQLLQEKLD 314 (364)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555444444
No 13
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=6.7e-39 Score=333.47 Aligned_cols=280 Identities=17% Similarity=0.176 Sum_probs=230.3
Q ss_pred HHHHHcCCHHHHHHHHhhchhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccC-CCCCcHhHHHHHcCCHH
Q 007515 15 FETILRGDTQAFLSLIQQDEAKIKQTVPGSLNTILHLTARFGHEELASEILKLCPEMVAAEN-EKMETPLHEACREGRLN 93 (600)
Q Consensus 15 ~~A~~~gd~~~~~~ll~~~~~~l~~~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n-~~g~TpLh~Aa~~g~~~ 93 (600)
..+...|+++.++.++. ...+..|.|+||+||..|+ +++++|++. .++..| ..|.||||+||..|+.+
T Consensus 71 ~~~~~~g~~~~~~~~~~-------~~~~~~g~t~L~~Aa~~~~-~~~~~L~~~---~~n~~d~~~g~t~Lh~Aa~~g~~~ 139 (373)
T 2fo1_E 71 NGNDFLGDFNHTNLQIP-------TEPEPESPIKLHTEAAGSY-AITEPITRE---SVNIIDPRHNRTVLHWIASNSSAE 139 (373)
T ss_dssp ------------------------------CCCHHHHHHHSSS-CCCSCCSTT---TTTTCCCSSCCCHHHHHHCTTCCS
T ss_pred CCCCccccccccccccc-------cCCCCCCccHHHHHhcCCc-hHHHHhccc---cccccCCcCCCCHHHHHHHCCCHH
Confidence 34455566666655533 2346789999999999554 788877653 366677 78999999999999998
Q ss_pred HHHHHH--------hCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHH
Q 007515 94 FVKLFV--------GIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKEL 165 (600)
Q Consensus 94 iv~~Ll--------~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~L 165 (600)
++++|+ +.+.++. ..|..|.||||+|+..|+.+++++|++++++++..+..+.||||.|+..|+.+++++|
T Consensus 140 ~v~~Ll~~~~~~ll~~ga~vn-~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~L 218 (373)
T 2fo1_E 140 KSEDLIVHEAKECIAAGADVN-AMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYM 218 (373)
T ss_dssp CCTTHHHHHHHHHHHTCCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCc-CCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHH
Confidence 888776 6777764 4589999999999999999999999999999998888899999999999999999999
Q ss_pred HhcC---ccccccCCCCCChHHHHHHhcC---cHHHHHHHHhcCCCCCC-------CCCCCCCCHHHHHHHcCCHHHHHH
Q 007515 166 LEAR---QEFAWKKDLNGHTPLHLSCSKG---HLEITRELLKLDPDLSS-------LPDNEGRTPLHWAAIKGRINIIDE 232 (600)
Q Consensus 166 l~~~---~~~~~~~d~~g~tpLh~A~~~g---~~~iv~~Ll~~~~~~~~-------~~d~~g~tpL~~Aa~~g~~~~v~~ 232 (600)
++.+ .++. ..|..|.||||+|+..+ +.+++++|++.|+++.. ..|..|.||||+|+..|+.+++++
T Consensus 219 l~~~~~~~~~~-~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~ 297 (373)
T 2fo1_E 219 LNSTKLKGDIE-ELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKY 297 (373)
T ss_dssp TTSHHHHHTTS-CCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHH
T ss_pred HhcCccccChh-hcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHH
Confidence 9987 3444 77999999999999998 89999999999998754 256789999999999999999999
Q ss_pred HHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCCCc
Q 007515 233 ILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDV 310 (600)
Q Consensus 233 Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad~ 310 (600)
|++.++..++.+|..|+||||+|+..|+.+++++|++. +.+++.+|.+|+||||+|+..|+.+++++|+++|++.
T Consensus 298 Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~---gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 298 LVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQ---GASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPER 372 (373)
T ss_dssp HHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT---TCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC---
T ss_pred HHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 99998788999999999999999999999999999997 6789999999999999999999999999999998764
No 14
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.5e-38 Score=328.14 Aligned_cols=254 Identities=22% Similarity=0.285 Sum_probs=186.6
Q ss_pred hhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHH
Q 007515 72 VAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLH 151 (600)
Q Consensus 72 l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh 151 (600)
.+..|..|.||||+||..|+.++|++|++.++++. ..|..|.||||+|+..|+.+++++|++++.+.+ ...+.||||
T Consensus 13 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~g~t~L~ 89 (364)
T 3ljn_A 13 RIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPT-IQNRFGCTALHLACKFGCVDTAKYLASVGEVHS--LWHGQKPIH 89 (364)
T ss_dssp ---CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCC--CBTTBCHHH
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcc--ccCCCCHHH
Confidence 34556677888888888888888888888776653 447777777777777777777777777776432 224455666
Q ss_pred HHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcC--CHHH
Q 007515 152 VSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKG--RINI 229 (600)
Q Consensus 152 ~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g--~~~~ 229 (600)
.|+..|+.+++++|++.+.+.. ..+-..........+ ...+ ....|..|.||||+|+..| +.++
T Consensus 90 ~A~~~g~~~~v~~Ll~~~~~~~-------~~~~~~~~~~~~~~~------~~~~-~~~~~~~g~t~L~~A~~~g~~~~~~ 155 (364)
T 3ljn_A 90 LAVMANKTDLVVALVEGAKERG-------QMPESLLNECDEREV------NEIG-SHVKHCKGQTALHWCVGLGPEYLEM 155 (364)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHT-------CCHHHHHTCCCCCCE------EEET-TEEEEESCCCHHHHHHHSCGGGHHH
T ss_pred HHHHcCCHHHHHHHHHhccccC-------CCHHHHHhhcchHhh------hhhc-cccCCCCCCCHHHHHHHcCCchHHH
Confidence 6666666666666665522210 001000000000000 0000 1125678999999999999 9999
Q ss_pred HHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhccc--ccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcC
Q 007515 230 IDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNI--TKLANMPDNDGNTILHLATAGKLTTMVIYLLKLG 307 (600)
Q Consensus 230 v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~--~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~g 307 (600)
+++|++.+ ..++..|..|+||||+|+..|+.+++++|++.... ...+|.+|..|+||||+|+..|+.+++++|+++|
T Consensus 156 v~~Ll~~g-a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 234 (364)
T 3ljn_A 156 IKILVQLG-ASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMG 234 (364)
T ss_dssp HHHHHHHT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTT
T ss_pred HHHHHHcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 99999987 57788899999999999999999999999998432 2238999999999999999999999999999999
Q ss_pred CCcccccCCCCCHHHHHhhhcCCcchhhHHHHHHHhcccc
Q 007515 308 VDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARR 347 (600)
Q Consensus 308 ad~n~~n~~G~T~l~~a~~~a~~~~~~~i~~~L~~~ga~~ 347 (600)
+|+|.+|..|.|||++|.. .++.+++++|++.|++.
T Consensus 235 ad~~~~d~~g~tpL~~A~~----~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 235 IDVNMEDNEHTVPLYLSVR----AAMVLLTKELLQKTDVF 270 (364)
T ss_dssp CCTTCCCTTSCCHHHHHHH----TCCHHHHHHHHHHSCHH
T ss_pred CCCCCCCCCCCCHHHHHHH----hChHHHHHHHHHcCCch
Confidence 9999999999999999654 47889999999998763
No 15
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.3e-37 Score=320.30 Aligned_cols=284 Identities=23% Similarity=0.216 Sum_probs=255.9
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHH
Q 007515 42 PGSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVAC 121 (600)
Q Consensus 42 ~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~ 121 (600)
+..+.|+||.||+.|+.+.|+.|+...+..++.+|..|.||||+|+..|+.++|++|++.++++. ..+..|.||||+|+
T Consensus 21 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~ 99 (351)
T 3utm_A 21 GEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVH-AKDKGGLVPLHNAC 99 (351)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHH
T ss_pred ccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCcHHHHHH
Confidence 34578999999999999999999998666688999999999999999999999999999998874 45889999999999
Q ss_pred HhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHh
Q 007515 122 ERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLK 201 (600)
Q Consensus 122 ~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~ 201 (600)
..|+.+++++|++++.+++..+..+.||||.|+..|+.+++++|++.+.++. ..+..|.||+++|+..+..+.+.+...
T Consensus 100 ~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~~~l~~a~~~~~~~~~~~~~~ 178 (351)
T 3utm_A 100 SYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPT-LVNCHGKSAVDMAPTPELRERLTYEFK 178 (351)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHCSSHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-cccCCCCcchHHHhhhhhHHHHHhhhc
Confidence 9999999999999999998888889999999999999999999999998876 778899999999999888888877664
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhc---CchhHHHHHHHhcccccccC
Q 007515 202 LDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKN---NQYEAVKYLMETLNITKLAN 278 (600)
Q Consensus 202 ~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~---~~~~iv~~Ll~~~~~~~~~n 278 (600)
..+++.++..++.+.++.++.... .....+..|.||||+|+.. +..+++++|++. +.++|
T Consensus 179 -------------~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~---g~~~~ 241 (351)
T 3utm_A 179 -------------GHSLLQAAREADLAKVKKTLALEI-INFKQPQSHETALHCAVASLHPKRKQVAELLLRK---GANVN 241 (351)
T ss_dssp -------------HHHHHHHHHTTCHHHHHHHTTTCC-TTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHT---TCCTT
T ss_pred -------------ccHHHHHHHhccHHHHHHHHHhhc-ccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHc---CCCcC
Confidence 357888999999999999998764 3444677899999999999 668999999987 66789
Q ss_pred CCCCCCChHhHHHHhCCcHHHHHHHHhcCCCcccccCCCCCHHHHHhhhcCCcchhhHHHHHHHhccccc
Q 007515 279 MPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARRC 348 (600)
Q Consensus 279 ~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad~n~~n~~G~T~l~~a~~~a~~~~~~~i~~~L~~~ga~~~ 348 (600)
.+|.+|+||||+|+..|+.+++++|+++|+++|.+|..|.|||++|.. .++.+++++|++.|+++.
T Consensus 242 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~----~~~~~~v~~Ll~~gad~~ 307 (351)
T 3utm_A 242 EKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAAL----AGHLQTCRLLLSYGSDPS 307 (351)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH----HTCHHHHHHHHHTTCCTT
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH----cCcHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999654 567899999999998754
No 16
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2.1e-37 Score=305.89 Aligned_cols=238 Identities=18% Similarity=0.215 Sum_probs=214.4
Q ss_pred CCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcC
Q 007515 78 KMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAG 157 (600)
Q Consensus 78 ~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g 157 (600)
.|+||||+|+..|+.+++++|++.+.++. ..+..|.||||+|+..|+.+++++|++++.+++..+..+.||||.|+..|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVN-IITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSG 80 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 58999999999999999999999988864 55889999999999999999999999999999988888999999999999
Q ss_pred CHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcc
Q 007515 158 HLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLN 237 (600)
Q Consensus 158 ~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~ 237 (600)
+.++++.|++.+.+.. .+.+|.||||+|+..|+.+++++|++.|+++.. .|..|.||||+|+..|+.++++.|++.+
T Consensus 81 ~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 157 (261)
T 2xai_A 81 SWDCVNLLLQHGASVQ--PESDLASPIHEAARRGHVECVNSLIAYGGNIDH-KISHLGTPLYLACENQQRACVKKLLESG 157 (261)
T ss_dssp CHHHHHHHHHTTCCSS--CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTTBCHHHHHHHTTCHHHHHHHHHHT
T ss_pred CHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCc-CCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 9999999999998875 355699999999999999999999999999866 7899999999999999999999999988
Q ss_pred ccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCCC--------
Q 007515 238 LQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVD-------- 309 (600)
Q Consensus 238 ~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad-------- 309 (600)
.+ ++ .+..|+||||+|+..++.+++++|++. +.+++.+|.+|+||||+|+..+ +++++|++.+.+
T Consensus 158 ~~-~~-~~~~g~t~Lh~A~~~~~~~~v~~Ll~~---gad~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~~l~~~~~ 230 (261)
T 2xai_A 158 AD-VN-QGKGQDSPLHAVARTASEELACLLMDF---GADTQAKNAEGKRPVELVPPES--PLAQLFLEREGPPSLMQLCR 230 (261)
T ss_dssp CC-TT-CCBTTBCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCGGGGSCTTC--THHHHHHHC-CCCCHHHHHH
T ss_pred CC-CC-CCCCCCChHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCChhhhccccc--cHHHHHHhccCCccHHHHHH
Confidence 54 33 378899999999999999999999998 6779999999999999999665 588999988764
Q ss_pred cccccCCCCCHHHHHhh
Q 007515 310 VNAINRKGYTALDVVES 326 (600)
Q Consensus 310 ~n~~n~~G~T~l~~a~~ 326 (600)
++.+|..|.||+|++..
T Consensus 231 ~~~r~~~g~t~l~~~~~ 247 (261)
T 2xai_A 231 LRIRKCFGIQQHHKITK 247 (261)
T ss_dssp HHHHTTSCTTCGGGGGG
T ss_pred HHHHHHhchhccccCcc
Confidence 56889999999999654
No 17
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=3.4e-37 Score=302.87 Aligned_cols=227 Identities=23% Similarity=0.271 Sum_probs=104.7
Q ss_pred hccCCCCCcHhHHHHHcC-------------CHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCccc
Q 007515 73 AAENEKMETPLHEACREG-------------RLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLL 139 (600)
Q Consensus 73 ~~~n~~g~TpLh~Aa~~g-------------~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~ 139 (600)
+.+|..|.||||+|+..| +.+++++|++.++++....|..|.||||+|+..|+.+++++|++++.++
T Consensus 4 n~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~ 83 (253)
T 1yyh_A 4 NVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA 83 (253)
T ss_dssp ------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 344445555555555444 6666666666666655555566666666666666666666666666555
Q ss_pred ccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHH
Q 007515 140 ILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLH 219 (600)
Q Consensus 140 ~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~ 219 (600)
+..+..+.||||.|+..|+.+++++|++.++......|..|.||||+|+..|+.+++++|++.|+++.. .|..|.||||
T Consensus 84 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~d~~g~t~L~ 162 (253)
T 1yyh_A 84 NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA-VDDLGKSALH 162 (253)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTC-BCTTSCBHHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCC-cCCCCCCHHH
Confidence 544444555555555555555555555555433334555566666666666666666666665555543 4555555555
Q ss_pred HHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHH
Q 007515 220 WAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTM 299 (600)
Q Consensus 220 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~i 299 (600)
+|+..|+.+++++|++.+ ..++.+|..|+||||+|+..|+.+++++|++. +.+++.+|..|+||||+|+..|+.++
T Consensus 163 ~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~---ga~~~~~d~~g~tpl~~A~~~g~~~i 238 (253)
T 1yyh_A 163 WAAAVNNVDAAVVLLKNG-ANKDMQNNREETPLFLAAREGSYETAKVLLDH---FANRDITDHMDRLPRDIAQERMHHDI 238 (253)
T ss_dssp HHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHc---CCCccccccCCCCHHHHHHHcCCHHH
Confidence 555555555555555544 23444444455555555555555555555444 33344455555555555555555555
Q ss_pred HHHHH
Q 007515 300 VIYLL 304 (600)
Q Consensus 300 v~~Ll 304 (600)
+++|.
T Consensus 239 ~~~l~ 243 (253)
T 1yyh_A 239 VRLLD 243 (253)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55544
No 18
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=8.9e-37 Score=304.24 Aligned_cols=261 Identities=19% Similarity=0.167 Sum_probs=186.2
Q ss_pred ccCCCCCCcHHHHHHHhCCHHHHHHHHHhCch--hhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcH
Q 007515 39 QTVPGSLNTILHLTARFGHEELASEILKLCPE--MVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESV 116 (600)
Q Consensus 39 ~~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~--~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tp 116 (600)
...+..|.||||+||..|+.++|++|++.++. .++.+|..|.||||+|+..|+.+++++|++.++++. ..+..|.||
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~tp 81 (282)
T 1oy3_D 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVL-VAERGGHTA 81 (282)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS-CCCTTSCCH
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCH
Confidence 34678899999999999999999999998665 478899999999999999999999999999998874 458899999
Q ss_pred HHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHH-
Q 007515 117 LYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEI- 195 (600)
Q Consensus 117 L~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~i- 195 (600)
||+|+..|+.+++++|++++.......... .+ ..... .....+.++++.++..+....
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~--~~----------------~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 140 (282)
T 1oy3_D 82 LHLACRVRAHTCACVLLQPRPSHPRDASDT--YL----------------TQSQD---CTPDTSHAPAAVDSQPNPENEE 140 (282)
T ss_dssp HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------------------------
T ss_pred HHHHHHcCCcchhHhhhccCCCCchhhHHH--Hh----------------hcccc---cCcchhcchhhhccccccchhh
Confidence 999999999999999999887643221110 00 00000 123345667777766554433
Q ss_pred HHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccc-ccccchhhHhHhcCchhHHHHHHHhcccc
Q 007515 196 TRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRT-IHGETVLHLTVKNNQYEAVKYLMETLNIT 274 (600)
Q Consensus 196 v~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~-~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~ 274 (600)
...+...+.++.. .+..|.||||+|+..|+.+++++|++.+. .++..+ ..|+||||+|+..|+.+++++|++. +
T Consensus 141 ~~~~~~~~~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~---g 215 (282)
T 1oy3_D 141 EPRDEDWRLQLEA-ENYDGHTPLHVAVIHKDAEMVRLLRDAGA-DLNKPEPTCGRTPLHLAVEAQAASVLELLLKA---G 215 (282)
T ss_dssp ---CCCGGGGTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT---T
T ss_pred hhhhhhhhhcCCC-cCCCCcCHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHc---C
Confidence 3333344444433 68889999999999999999999998874 455555 4599999999999999999999987 6
Q ss_pred cccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCCCcccccCCCCCHHHHHhh
Q 007515 275 KLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVES 326 (600)
Q Consensus 275 ~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad~n~~n~~G~T~l~~a~~ 326 (600)
.++|.+|..|+||||+|+..++.+++++|+++|++++.+|.+|.||++++..
T Consensus 216 ad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~ 267 (282)
T 1oy3_D 216 ADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGS 267 (282)
T ss_dssp CCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC------------
T ss_pred CCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCC
Confidence 6789999999999999999999999999999999999999999999999754
No 19
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=3.7e-36 Score=299.74 Aligned_cols=267 Identities=18% Similarity=0.143 Sum_probs=189.4
Q ss_pred ccccCccccHHHHHHHHcCCHHHHHHHHhhchhh-hhccCCCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCc
Q 007515 3 IEAINPYMERHLFETILRGDTQAFLSLIQQDEAK-IKQTVPGSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMET 81 (600)
Q Consensus 3 ~~~~~~~~~~~L~~A~~~gd~~~~~~ll~~~~~~-l~~~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~T 81 (600)
++.+++.+.++|+.|+..|+.+.++.+++.+... .....+..|.||||+||..|+.++|++|++.+.+ ++.+|..|.|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~t 80 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG-VLVAERGGHT 80 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTSCC
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCC
Confidence 3567889999999999999999999999877552 1345677899999999999999999999999988 7899999999
Q ss_pred HhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHH
Q 007515 82 PLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDI 161 (600)
Q Consensus 82 pLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~ 161 (600)
|||+|+..|+.+++++|++.++........ +.+ .... ......+.++++.+...+....
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~---~~~----------------~~~~--~~~~~~~~~~~~~~~~~~~~~~ 139 (282)
T 1oy3_D 81 ALHLACRVRAHTCACVLLQPRPSHPRDASD---TYL----------------TQSQ--DCTPDTSHAPAAVDSQPNPENE 139 (282)
T ss_dssp HHHHHTTTTCHHHHHHHSSSCCSSCCCC----------------------------------------------------
T ss_pred HHHHHHHcCCcchhHhhhccCCCCchhhHH---HHh----------------hccc--ccCcchhcchhhhccccccchh
Confidence 999999999999999999988765321110 000 0000 0111223345655555544433
Q ss_pred HHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccccc
Q 007515 162 VKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSA 241 (600)
Q Consensus 162 v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~ 241 (600)
...++.......+..|..|.||||+|+..|+.+++++|+++|+++....+..|.||||+|+..|+.+++++|++.+ ..+
T Consensus 140 ~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-ad~ 218 (282)
T 1oy3_D 140 EEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAG-ADP 218 (282)
T ss_dssp ----CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCT
T ss_pred hhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcC-CCC
Confidence 3333333222334778899999999999999999999999999987744456999999999999999999999986 577
Q ss_pred ccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCC
Q 007515 242 EMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGK 295 (600)
Q Consensus 242 ~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~ 295 (600)
+.+|..|+||||+|+.+++.+++++|++. +..++.+|.+|.|||++|....
T Consensus 219 ~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 219 TARMYGGRTPLGSALLRPNPILARLLRAH---GAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp TCCCTTSCCHHHHHHTSSCHHHHHHHHHT---TCCCCCCC--------------
T ss_pred cccccCCCCHHHHHHHcCCcHHHHHHHHc---CCCcCcCCCcccccccccCCcc
Confidence 88999999999999999999999999988 6779999999999999997655
No 20
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=7.7e-36 Score=288.63 Aligned_cols=226 Identities=25% Similarity=0.311 Sum_probs=130.9
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHh
Q 007515 44 SLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACER 123 (600)
Q Consensus 44 ~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~ 123 (600)
.++|+||.|+..|+.+.++++++.++..++..|..|.||||+|+..|+.+++++|++.+.++. ..+..|.||||+|+..
T Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~ 83 (231)
T 3aji_A 5 VSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVN-DKDDAGWSPLHIAASA 83 (231)
T ss_dssp CSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHH
T ss_pred cccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCC-CcCCCCCCHHHHHHHc
Confidence 356666666666666666666666665556666666666666666666666666666655542 2345555555555555
Q ss_pred CCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcC
Q 007515 124 GRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLD 203 (600)
Q Consensus 124 g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~ 203 (600)
|+.+++++|++++.+++ ..|..|.||||+|+..|+.+++++|++.+
T Consensus 84 ~~~~~v~~Ll~~g~~~~----------------------------------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 129 (231)
T 3aji_A 84 GXDEIVKALLVKGAHVN----------------------------------AVNQNGCTPLHYAASKNRHEIAVMLLEGG 129 (231)
T ss_dssp TCHHHHHHHHHTTCCTT----------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CHHHHHHHHHHcCCCCC----------------------------------CCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 55555555555444322 33445555555555555555555555555
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCC
Q 007515 204 PDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDND 283 (600)
Q Consensus 204 ~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~ 283 (600)
.++.. .+..|.||||.|+..|+.++++.|++.+ .+++.+|.+
T Consensus 130 ~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-------------------------------------~~~~~~~~~ 171 (231)
T 3aji_A 130 ANPDA-KDHYDATAMHRAAAKGNLKMVHILLFYK-------------------------------------ASTNIQDTE 171 (231)
T ss_dssp CCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTT-------------------------------------CCSCCCCTT
T ss_pred CCCCC-cCCCCCcHHHHHHHcCCHHHHHHHHhcC-------------------------------------CCccccCCC
Confidence 55433 4445555555555555555555554432 234555666
Q ss_pred CChHhHHHHhCCcHHHHHHHHhcCCCcccccCCCCCHHHHHhhhcCCcchhhHHHHHHHhccc
Q 007515 284 GNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGAR 346 (600)
Q Consensus 284 G~T~Lh~A~~~~~~~iv~~Ll~~gad~n~~n~~G~T~l~~a~~~a~~~~~~~i~~~L~~~ga~ 346 (600)
|+||||+|+..++.+++++|+++|++++.+|..|.||+++| ...++.+++++|.++|++
T Consensus 172 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A----~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 172 GNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVA----KGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHS----CHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH----HhhHHHHHHHHHcccccc
Confidence 66666666666666666666666666666666666666663 334455666666666553
No 21
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=4.7e-36 Score=291.86 Aligned_cols=165 Identities=22% Similarity=0.305 Sum_probs=81.1
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHHh---CchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHH
Q 007515 41 VPGSLNTILHLTARFGHEELASEILKL---CPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVL 117 (600)
Q Consensus 41 ~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~---~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL 117 (600)
.|..|+||||+||..|+.+++++|++. .+..++..|..|.||||+|+..|+.+++++|++.++++. ..+..|.|||
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l 83 (241)
T 1k1a_A 5 ADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPM-ALDRHGQTAA 83 (241)
T ss_dssp --CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHH
Confidence 345555666666666666555555551 222245555555555555555555555555555554442 2244555555
Q ss_pred HHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHH
Q 007515 118 YVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITR 197 (600)
Q Consensus 118 ~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~ 197 (600)
|+|+..|+.+++++|++.+.... .++ ...|..|.||||+|+..|+.++++
T Consensus 84 ~~A~~~~~~~~~~~Ll~~~~~~~-----------------------------~~~-~~~~~~g~t~L~~A~~~~~~~~~~ 133 (241)
T 1k1a_A 84 HLACEHRSPTCLRALLDSAAPGT-----------------------------LDL-EARNYDGLTALHVAVNTECQETVQ 133 (241)
T ss_dssp HHHHHTTCHHHHHHHHHHSCTTS-----------------------------CCT-TCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCcc-----------------------------ccc-cccCcCCCcHHHHHHHcCCHHHHH
Confidence 55555555555555554443100 011 133444555555555555555555
Q ss_pred HHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Q 007515 198 ELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 236 (600)
Q Consensus 198 ~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~ 236 (600)
+|++.|+++....+..|.||||+|+..|+.++++.|++.
T Consensus 134 ~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 172 (241)
T 1k1a_A 134 LLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQH 172 (241)
T ss_dssp HHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 555555554432224455555555555555554444443
No 22
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2.3e-35 Score=286.50 Aligned_cols=231 Identities=24% Similarity=0.360 Sum_probs=143.2
Q ss_pred hhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHH
Q 007515 72 VAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLH 151 (600)
Q Consensus 72 l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh 151 (600)
++.+|..|.||||+|+..|+.+++++|++.+.++. ..+..|.||||+|+..|+.+++++|++++.+++..
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--------- 73 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANID-TCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPK--------- 73 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCC---------
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcC-ccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCC---------
Confidence 45566777777777777777777777777766653 33566777777777777777777776666555444
Q ss_pred HHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Q 007515 152 VSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIID 231 (600)
Q Consensus 152 ~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~ 231 (600)
|..|.||||+|+..|+.+++++|++.++......+..|.||||.|+..|+.++++
T Consensus 74 -------------------------~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~ 128 (237)
T 3b7b_A 74 -------------------------DAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVK 128 (237)
T ss_dssp -------------------------CTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred -------------------------CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHH
Confidence 4445555555555555555555555552222234455555555555555555555
Q ss_pred HHHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCCCcc
Q 007515 232 EILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVN 311 (600)
Q Consensus 232 ~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad~n 311 (600)
+|++.+ ..++.++..|.||||+|+..|+.+++++|++. +.+++.+|..|+||||+|+..++.+++++|+++|++++
T Consensus 129 ~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 204 (237)
T 3b7b_A 129 LLLSKG-SDINIRDNEENICLHWAAFSGCVDIAEILLAA---KCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVT 204 (237)
T ss_dssp HHHHTT-CCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTT---TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT
T ss_pred HHHHCC-CCCCccCCCCCCHHHHHHHCCCHHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCC
Confidence 555544 23444455555666666666666666666554 44567777888888888888888888888888888888
Q ss_pred cccCCCCCHHHHHhhhcCCcchhhHHHHHH
Q 007515 312 AINRKGYTALDVVESDASNSGALQIVPALE 341 (600)
Q Consensus 312 ~~n~~G~T~l~~a~~~a~~~~~~~i~~~L~ 341 (600)
.+|.+|.||+++|..........++++.|.
T Consensus 205 ~~d~~g~t~l~~A~~~~~~~~~~~l~~~l~ 234 (237)
T 3b7b_A 205 LKNKEGETPLQCASLNSQVWSALQMSKALQ 234 (237)
T ss_dssp CCCTTSCCHHHHSCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 888888888888543322222234444443
No 23
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=4e-35 Score=284.75 Aligned_cols=225 Identities=24% Similarity=0.302 Sum_probs=171.0
Q ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHH
Q 007515 40 TVPGSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYV 119 (600)
Q Consensus 40 ~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~ 119 (600)
..+..|.||||+||..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++.+.++. ..+..|.||||+
T Consensus 6 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~ 83 (237)
T 3b7b_A 6 MEHQNKRSPLHAAAEAGHVDICHMLVQAGAN-IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVD-PKDAEGSTCLHL 83 (237)
T ss_dssp CSSCCSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCC-CCCTTSCCHHHH
T ss_pred cccCCCCCHHHHHHHcCcHHHHHHHHHcCCC-cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC-CCCCCCCcHHHH
Confidence 4577899999999999999999999999887 78899999999999999999999999999998764 458899999999
Q ss_pred HHHhCCHHHHHHHHhCC-cccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHH
Q 007515 120 ACERGRLDVAKQLLNYS-SLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRE 198 (600)
Q Consensus 120 A~~~g~~e~v~~Ll~~~-~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~ 198 (600)
|+..|+.+++++|++++ .+++..+..+.||||.|+..++.+++++|++.+.++. ..|..|.||||+|+..|+.+++++
T Consensus 84 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~ 162 (237)
T 3b7b_A 84 AAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDIN-IRDNEENICLHWAAFSGCVDIAEI 162 (237)
T ss_dssp HHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHCCHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-ccCCCCCCHHHHHHHCCCHHHHHH
Confidence 99999999999999987 5555555556667777777777777777777666654 556667777777777777777777
Q ss_pred HHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHH
Q 007515 199 LLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLME 269 (600)
Q Consensus 199 Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~ 269 (600)
|++.|+++.. .|..|.||||+|+..|+.++++.|++.+ .+.+.+|..|+||||+|+.+++.+.+..+++
T Consensus 163 Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-ad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 163 LLAAKCDLHA-VNIHGDSPLHIAARENRYDCVVLFLSRD-SDVTLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp HHTTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred HHHcCCCCCC-cCCCCCCHHHHHHHhCCHhHHHHHHHcC-CCCCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7776666544 5666666777766666666666666655 3445556666666666666666554444443
No 24
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.8e-35 Score=287.74 Aligned_cols=233 Identities=25% Similarity=0.274 Sum_probs=173.6
Q ss_pred hccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHH
Q 007515 73 AAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHV 152 (600)
Q Consensus 73 ~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~ 152 (600)
+.+|..|+||||+||..|+.+++++|++.. .+.+.+++..+..|.||||.
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~------------------------------~~~~~~~~~~~~~g~t~L~~ 52 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLF------------------------------QQGGRELDIYNNLRQTPLHL 52 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHH------------------------------HHTTCCSCCCCTTSCCHHHH
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHH------------------------------HhcCCCCCcccccCCCHHHH
Confidence 445566666666666666666666665410 01333333333334444444
Q ss_pred HHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCC----CCCCCCCCCCCCHHHHHHHcCCHH
Q 007515 153 SAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDP----DLSSLPDNEGRTPLHWAAIKGRIN 228 (600)
Q Consensus 153 A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~----~~~~~~d~~g~tpL~~Aa~~g~~~ 228 (600)
|+..|+.+++++|++.+.++. ..|..|.||||+|+..|+.+++++|++.++ ++. ..+..|.||||+|+..|+.+
T Consensus 53 A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~-~~~~~g~t~L~~A~~~~~~~ 130 (241)
T 1k1a_A 53 AVITTLPSVVRLLVTAGASPM-ALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLE-ARNYDGLTALHVAVNTECQE 130 (241)
T ss_dssp HHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTT-CCCTTSCCHHHHHHHHTCHH
T ss_pred HHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccc-ccCcCCCcHHHHHHHcCCHH
Confidence 444455555555555444443 557788899999999999999999999887 443 37889999999999999999
Q ss_pred HHHHHHhcccccccccc-ccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcC
Q 007515 229 IIDEILSLNLQSAEMRT-IHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLG 307 (600)
Q Consensus 229 ~v~~Ll~~~~~~~~~~~-~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~g 307 (600)
+++.|++.+. ..+..+ ..|.||||+|+..++.+++++|++. +.++|.+|.+|+||||+|+..++.+++++|+++|
T Consensus 131 ~~~~Ll~~g~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 206 (241)
T 1k1a_A 131 TVQLLLERGA-DIDAVDIKSGRSPLIHAVENNSLSMVQLLLQH---GANVNAQMYSGSSALHSASGRGLLPLVRTLVRSG 206 (241)
T ss_dssp HHHHHHHTTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHcCC-CcccccccCCCcHHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 9999999885 455555 7899999999999999999999998 6779999999999999999999999999999999
Q ss_pred CCcccccCCCCCHHHHHhhhcCCcchhhHHHHHHHhcc
Q 007515 308 VDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGA 345 (600)
Q Consensus 308 ad~n~~n~~G~T~l~~a~~~a~~~~~~~i~~~L~~~ga 345 (600)
++++.+|..|.||+++ +...++.++++.|.+.++
T Consensus 207 a~~~~~~~~g~tpl~~----A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 207 ADSSLKNCHNDTPLMV----ARSRRVIDILRGKATRPA 240 (241)
T ss_dssp CCTTCCCTTSCCTTTT----CSSHHHHHHHTC------
T ss_pred CCCCCcCCCCCCHHHH----HHhcCcHHHHhhhccCCC
Confidence 9999999999999999 566788889888876553
No 25
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=8.7e-35 Score=280.51 Aligned_cols=220 Identities=19% Similarity=0.221 Sum_probs=157.9
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCC--cccccccCCCCCcHHHHHHH
Q 007515 45 LNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGID--PSVIYKLNRDNESVLYVACE 122 (600)
Q Consensus 45 g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~--~~~~~~~~~~g~tpL~~A~~ 122 (600)
|+||||.||..|+.++|++|++.++......|..|.||||+|+..|+.+++++|++.+ +++....+..|.||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 6899999999999999999999998877778999999999999999999999999988 55555467888999999999
Q ss_pred hCCHHHHHHHHhCC--cccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHH
Q 007515 123 RGRLDVAKQLLNYS--SLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELL 200 (600)
Q Consensus 123 ~g~~e~v~~Ll~~~--~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll 200 (600)
.|+.+++++|++++ .+++..+..+.||||.|+..|+.+++++|++.+.++. ..|..|+||||+|+..|+.+++++|+
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll 160 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVR-IKDKFNQIPLHRAASVGSLKLIELLC 160 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99999999988887 5555555556666666666666666666666666554 55666666666666666666666666
Q ss_pred hcC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHH
Q 007515 201 KLD-PDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLME 269 (600)
Q Consensus 201 ~~~-~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~ 269 (600)
+.+ .++ ...|..|+||||+|+..|+.+++++|++..+.+.+.+|..|+||||+|+.. ++.++|++
T Consensus 161 ~~g~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~ 226 (228)
T 2dzn_A 161 GLGKSAV-NWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLN 226 (228)
T ss_dssp TTTCCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHHT
T ss_pred hcCcccc-cCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHh
Confidence 666 443 335666666666666666666666666333345556666666666666543 34444443
No 26
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=8e-35 Score=281.46 Aligned_cols=225 Identities=22% Similarity=0.241 Sum_probs=186.5
Q ss_pred ccccHHHHHHHHcCCHHHHHHHHhhchhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHH
Q 007515 8 PYMERHLFETILRGDTQAFLSLIQQDEAKIKQTVPGSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEAC 87 (600)
Q Consensus 8 ~~~~~~L~~A~~~gd~~~~~~ll~~~~~~l~~~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa 87 (600)
...+..|+.|+..|+.+.++++++.++.. ....+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~ 81 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERILADKSL-ATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP-VNDKDDAGWSPLHIAA 81 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHHHHCGGG-GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHH
T ss_pred ccccchHHHHHHhCCHHHHHHHHHhchhh-hhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC-CCCcCCCCCCHHHHHH
Confidence 34667899999999999999999988764 345678899999999999999999999999887 8889999999999999
Q ss_pred HcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHh
Q 007515 88 REGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLE 167 (600)
Q Consensus 88 ~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~ 167 (600)
..|+.+++++|++.++++. ..+..|.||||+|+..|+.+++++|++++.+++..+..+.||||.|+..|+.+++++|++
T Consensus 82 ~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 160 (231)
T 3aji_A 82 SAGXDEIVKALLVKGAHVN-AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLF 160 (231)
T ss_dssp HHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HcCHHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHh
Confidence 9999999999999998874 458899999999999999999999999988877666667777777777777777777777
Q ss_pred cCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcc
Q 007515 168 ARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLN 237 (600)
Q Consensus 168 ~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~ 237 (600)
.+.++. .+|..|.||||+|+..|+.+++++|+++|+++.. +|..|.||||+|+..++.+++++|.+.+
T Consensus 161 ~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~~~i~~lL~~~~ 228 (231)
T 3aji_A 161 YKASTN-IQDTEGNTPLHLACDEERVEEAKFLVTQGASIYI-ENKEEKTPLQVAKGGLGLILKRLAEGEE 228 (231)
T ss_dssp TTCCSC-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHSCHHHHHHHHHHHHHHH
T ss_pred cCCCcc-ccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHhhHHHHHHHHHcccc
Confidence 776665 5667777777777777777777777777777643 6777777777777777777777776654
No 27
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.4e-35 Score=289.68 Aligned_cols=227 Identities=17% Similarity=0.151 Sum_probs=170.7
Q ss_pred CCCCCCcHHHHHHHhC-------------CHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCccccc
Q 007515 41 VPGSLNTILHLTARFG-------------HEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIY 107 (600)
Q Consensus 41 ~~~~g~T~Lh~Aa~~g-------------~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~ 107 (600)
.|..|.||||+|+..| +.+++++|++.+++.....|..|.||||+|+..|+.+++++|++.++++.
T Consensus 6 ~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~- 84 (253)
T 1yyh_A 6 RGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAN- 84 (253)
T ss_dssp ----------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-
T ss_pred CCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-
Confidence 4667889999999877 88999999999988667778999999999999999999999999988774
Q ss_pred ccCCCCCcHHHHHHHhCCHHHHHHHHhCCc-ccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHH
Q 007515 108 KLNRDNESVLYVACERGRLDVAKQLLNYSS-LLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHL 186 (600)
Q Consensus 108 ~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~-~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~ 186 (600)
..+..|.||||+|+..|+.+++++|++++. +++..+..+.||||.|+..|+.++++.|++.+.++. ..|..|+||||+
T Consensus 85 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~ 163 (253)
T 1yyh_A 85 IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVN-AVDDLGKSALHW 163 (253)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTT-CBCTTSCBHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCC-CcCCCCCCHHHH
Confidence 458889999999999999999999999887 677777778889999999999999999999888876 778889999999
Q ss_pred HHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHH
Q 007515 187 SCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKY 266 (600)
Q Consensus 187 A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~ 266 (600)
|+..|+.+++++|++.|+++.. .|..|.||||+|+..|+.++++.|++.+ .+.+.+|..|+||||+|+++|+.+++++
T Consensus 164 A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~g~~~i~~~ 241 (253)
T 1yyh_A 164 AAAVNNVDAAVVLLKNGANKDM-QNNREETPLFLAAREGSYETAKVLLDHF-ANRDITDHMDRLPRDIAQERMHHDIVRL 241 (253)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCccccccCCCCHHHHHHHcCCHHHHHH
Confidence 9999999999999999998765 7888999999999999999999999987 4677888899999999999999999999
Q ss_pred HHHhc
Q 007515 267 LMETL 271 (600)
Q Consensus 267 Ll~~~ 271 (600)
|.+..
T Consensus 242 l~~~~ 246 (253)
T 1yyh_A 242 LDLEH 246 (253)
T ss_dssp HHC--
T ss_pred HHHHh
Confidence 98753
No 28
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.4e-34 Score=278.96 Aligned_cols=222 Identities=25% Similarity=0.317 Sum_probs=163.0
Q ss_pred CCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCC
Q 007515 79 METPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGH 158 (600)
Q Consensus 79 g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~ 158 (600)
|+||||+|++.|+.++++.|++.+++.....+..|.||||+|+..|+.+++++|++++++.+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~----------------- 64 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL----------------- 64 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCG-----------------
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccc-----------------
Confidence 789999999999999999999988888777788888888888888888888888888743321
Q ss_pred HHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Q 007515 159 LDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLD--PDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 236 (600)
Q Consensus 159 ~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~--~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~ 236 (600)
....|..|+||||+|+..|+.+++++|++.+ +++.. .+..|.||||.|+..|+.+++++|++.
T Consensus 65 --------------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 129 (228)
T 2dzn_A 65 --------------DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNK-ITNQGVTCLHLAVGKKWFEVSQFLIEN 129 (228)
T ss_dssp --------------GGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred --------------cccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccc-CCcCCCCHHHHHHHcCCHhHHHHHHHc
Confidence 1123555666666666666666666666665 44433 556666666666666666666666665
Q ss_pred cccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHH-hcCCCcccccC
Q 007515 237 NLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLL-KLGVDVNAINR 315 (600)
Q Consensus 237 ~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll-~~gad~n~~n~ 315 (600)
+ ...+.+|..|+||||+|+..|+.+++++|++.. ..++|.+|.+|+||||+|+..++.+++++|+ +.|+|++.+|.
T Consensus 130 g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~ 206 (228)
T 2dzn_A 130 G-ASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG--KSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDN 206 (228)
T ss_dssp T-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTT--CCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCT
T ss_pred C-CCccccCCCCCCHHHHHHHcCCHHHHHHHHhcC--cccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCC
Confidence 4 345566666777777777777777777776652 1457888899999999999999999999999 88999999999
Q ss_pred CCCCHHHHHhhhcCCcchhhHHHHHHH
Q 007515 316 KGYTALDVVESDASNSGALQIVPALEE 342 (600)
Q Consensus 316 ~G~T~l~~a~~~a~~~~~~~i~~~L~~ 342 (600)
+|.||+++|.. .++.++|++
T Consensus 207 ~g~t~l~~A~~-------~~~~~~l~~ 226 (228)
T 2dzn_A 207 KGAKAEDVALN-------EQVKKFFLN 226 (228)
T ss_dssp TSCBGGGGCSS-------TTHHHHHHT
T ss_pred CCCcHHHHHHH-------HHHHHHHHh
Confidence 99999998532 246666654
No 29
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=274.66 Aligned_cols=232 Identities=23% Similarity=0.254 Sum_probs=146.5
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHH
Q 007515 41 VPGSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVA 120 (600)
Q Consensus 41 ~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A 120 (600)
.+..|.|+||.|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++.+++.....+..|.|||++|
T Consensus 5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A 83 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGIYERCRELVEAGYD-VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWA 83 (240)
T ss_dssp CSCGGGCCHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHH
T ss_pred cccccchHHHHHHHcCChHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHH
Confidence 456678888888888888888888888776 7777888888888888888888888888888877666666678888888
Q ss_pred HHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCc-HHHHHHH
Q 007515 121 CERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGH-LEITREL 199 (600)
Q Consensus 121 ~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~-~~iv~~L 199 (600)
+..|+.+++++|++.+.+++..+..+.||||.|+..|+.+++++|++.+.++. ..|..|.||||+|+..++ .+++++|
T Consensus 84 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~-~~~~~g~t~l~~a~~~~~~~~~~~~L 162 (240)
T 3eu9_A 84 TRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVD-MMDQNGMTPLMWAAYRTHSVDPTRLL 162 (240)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHCCSSTTHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcc-ccCCCCCcHHHHHHHhCChHHHHHHH
Confidence 88888888888877776665444444455555555555555555555444443 344445555555553333 4444555
Q ss_pred HhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCC
Q 007515 200 LKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANM 279 (600)
Q Consensus 200 l~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~ 279 (600)
++.++++....+. .|.||||+|+.+++.+++++|++. +.+++.
T Consensus 163 ~~~~~~~~~~~~~----------------------------------~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~ 205 (240)
T 3eu9_A 163 LTFNVSVNLGDKY----------------------------------HKNTALHWAVLAGNTTVISLLLEA---GANVDA 205 (240)
T ss_dssp HHTTCCTTCCCTT----------------------------------TCCCHHHHHHHHTCHHHHHHHHHH---TCCTTC
T ss_pred HhcCCCcchhhcc----------------------------------CCCcHHHHHHHcCCHHHHHHHHHc---CCCCCC
Confidence 5554444332122 444555555555555555555544 334555
Q ss_pred CCCCCChHhHHHHhCCcHHHHHHHHhcCCCcc
Q 007515 280 PDNDGNTILHLATAGKLTTMVIYLLKLGVDVN 311 (600)
Q Consensus 280 ~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad~n 311 (600)
+|..|.||||+|+..++.+++++|++.|++..
T Consensus 206 ~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~ 237 (240)
T 3eu9_A 206 QNIKGESALDLAKQRKNVWMINHLQEARQAKG 237 (240)
T ss_dssp BCTTSCBHHHHHHHTTCHHHHHHHHHHC----
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHHhhhccC
Confidence 66666666666666666666666666665544
No 30
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.6e-34 Score=290.77 Aligned_cols=260 Identities=21% Similarity=0.222 Sum_probs=216.6
Q ss_pred HHHHhCCHHHHHHHHHhCchh--------hhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHH
Q 007515 51 LTARFGHEELASEILKLCPEM--------VAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACE 122 (600)
Q Consensus 51 ~Aa~~g~~e~v~~Ll~~~~~~--------l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 122 (600)
.++..++.+.++.++...... ....+..|.||||.||..|+.++|++|++.++++. ..+..|.||||+|+.
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~ 82 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADIN-YANVDGLTALHQACI 82 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTT-CBCTTCCBHHHHHHH
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHH
Confidence 567788888888888765431 11224467899999999999999999999998864 458899999999999
Q ss_pred hCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhc
Q 007515 123 RGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKL 202 (600)
Q Consensus 123 ~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ 202 (600)
.|+.+++++|++++.+++..+..|.||||+|+..|+.+++++|++.+.++. ..|..|.||||+|+..++.++++.++..
T Consensus 83 ~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~ll~~ 161 (299)
T 1s70_B 83 DDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVG-AVNSEGDTPLDIAEEEAMEELLQNEVNR 161 (299)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHCCSHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC-CcCCCCCCHHHHHHhcchHHHHHHHHhh
Confidence 999999999999999988888888899999999999999999999988876 7788999999999999999999988865
Q ss_pred C-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCC
Q 007515 203 D-PDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPD 281 (600)
Q Consensus 203 ~-~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d 281 (600)
. .+... .+..+.+++ ...+..++..+.......+..|.||||+|+..|+.+++++|++. +.++|.+|
T Consensus 162 ~~~~~~~-~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---g~d~~~~d 229 (299)
T 1s70_B 162 QGVDIEA-ARKEEERIM--------LRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQA---RYDVNIKD 229 (299)
T ss_dssp HTCCHHH-HHHHHHHHH--------HHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTT---TCCTTCCC
T ss_pred cCCCchh-hhhhhhhHH--------HHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHc---CCCCCCcC
Confidence 3 22211 111122222 23455666666666666778999999999999999999999987 67799999
Q ss_pred CCCChHhHHHHhCCcHHHHHHHHhcCCCcccccCCCCCHHHHH
Q 007515 282 NDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVV 324 (600)
Q Consensus 282 ~~G~T~Lh~A~~~~~~~iv~~Ll~~gad~n~~n~~G~T~l~~a 324 (600)
.+|+||||+|+..|+.+++++|+++|+|++.+|..|.||+++|
T Consensus 230 ~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A 272 (299)
T 1s70_B 230 YDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVA 272 (299)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSC
T ss_pred CCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 9999999999999999999999999999999999999999996
No 31
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=8e-35 Score=288.21 Aligned_cols=216 Identities=25% Similarity=0.303 Sum_probs=140.6
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHHhCchh-------hhccCCCCCcHhHHHHHcCCH-HHHHHHHhCCcccccccCCC
Q 007515 41 VPGSLNTILHLTARFGHEELASEILKLCPEM-------VAAENEKMETPLHEACREGRL-NFVKLFVGIDPSVIYKLNRD 112 (600)
Q Consensus 41 ~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~-------l~~~n~~g~TpLh~Aa~~g~~-~iv~~Ll~~~~~~~~~~~~~ 112 (600)
.|..+.++|+.||..|+.++|++|++.+... ++..+..|.||||.|+..++. .+++.|++.|.++. ..|.+
T Consensus 7 kd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn-~~d~~ 85 (269)
T 4b93_B 7 KDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVN-VTSQD 85 (269)
T ss_dssp CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTT-CCCTT
T ss_pred cCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCC-CcCCC
Confidence 3555678888888888888888888876542 455667788888888877765 47788888887764 44778
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCc
Q 007515 113 NESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGH 192 (600)
Q Consensus 113 g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~ 192 (600)
|.||||+|+..|+.+++++|++.+++++..+..+.||+|.|+..++.++++.|++.+.+++ .+|..|+||||+||..|+
T Consensus 86 G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n-~~d~~g~TpL~~A~~~g~ 164 (269)
T 4b93_B 86 GSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPN-KKDLSGNTPLIYACSGGH 164 (269)
T ss_dssp SCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTCCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHCCC
Confidence 8888888888888888888888888777777777777777777777777777777777765 667777777777777777
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCc
Q 007515 193 LEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQ 260 (600)
Q Consensus 193 ~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~ 260 (600)
.+++++|++.|++++. .+..|.||||+|+..|+.++++.|++.+ .+++.+|..|+||||+|+++++
T Consensus 165 ~~~v~~Ll~~gadvn~-~~~~g~t~Lh~A~~~g~~~~v~~Ll~~G-ad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 165 HELVALLLQHGASINA-SNNKGNTALHEAVIEKHVFVVELLLLHG-ASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp GGGHHHHHHTTCCTTC-BCTTSCBHHHHHHHTTCHHHHHHHHHTT-CCSCCCCTTSCCSGGGSCTTCH
T ss_pred HHHHHHHHHCCCCCCc-cccCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHhCCc
Confidence 7777777777777654 6777777777777777777777777765 4566677777777777766654
No 32
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.6e-35 Score=289.97 Aligned_cols=237 Identities=20% Similarity=0.298 Sum_probs=156.3
Q ss_pred ccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHH
Q 007515 74 AENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVS 153 (600)
Q Consensus 74 ~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A 153 (600)
.+|.++.+||+.||+.|+.++|++|++.++....... ...+..+..+.||||.|
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~--------------------------~~~~~~~~~~~t~L~~a 59 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAE--------------------------DTVSAADPEFCHPLCQC 59 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC---------------------------------------------------
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCccccccc--------------------------ccccccCccCCCHHHHH
Confidence 4566677888888888888888888877655321100 00111223344566666
Q ss_pred HhcCCH-HHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Q 007515 154 AMAGHL-DIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDE 232 (600)
Q Consensus 154 ~~~g~~-~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~ 232 (600)
+..++. .+++.|++.+.+++ ..|.+|+||||+||..|+.+++++|++.++++.. .+.+|.||+|.|+..++.++++.
T Consensus 60 ~~~~~~~~~v~~Ll~~Gadvn-~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~-~~~~g~t~l~~a~~~~~~~~~~~ 137 (269)
T 4b93_B 60 PKCAPAQKRLAKVPASGLGVN-VTSQDGSSPLHVAALHGRADLIPLLLKHGANAGA-RNADQAVPLHLACQQGHFQVVKC 137 (269)
T ss_dssp ---------------CCCCTT-CCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HHhCCHHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCc-cCCCCCCccccccccChHHHHHH
Confidence 665554 36677777776665 6778888888888888888888888888888755 67888888888888888888888
Q ss_pred HHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCCCccc
Q 007515 233 ILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNA 312 (600)
Q Consensus 233 Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad~n~ 312 (600)
|++.+ .+++.+|..|+||||+|+..|+.+++++|++. +.++|.+|..|+||||+|+..|+.++|++|+++|+|+|.
T Consensus 138 Ll~~g-~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~---gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~ 213 (269)
T 4b93_B 138 LLDSN-AKPNKKDLSGNTPLIYACSGGHHELVALLLQH---GASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQV 213 (269)
T ss_dssp HHHTT-CCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHT---TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred HHHCC-CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC---CCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 88876 46677788888888888888888899988887 567888999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHhhhcCCcch-hhHHHHHHHhccc
Q 007515 313 INRKGYTALDVVESDASNSGA-LQIVPALEEAGAR 346 (600)
Q Consensus 313 ~n~~G~T~l~~a~~~a~~~~~-~~i~~~L~~~ga~ 346 (600)
+|.+|+|||++|.. .+. .++++.|...++.
T Consensus 214 ~d~~G~TpL~~A~~----~~~i~~lL~~l~~~~~~ 244 (269)
T 4b93_B 214 LNKRQRTAVDCAEQ----NSKIMELLQVVPSCVAS 244 (269)
T ss_dssp CCTTSCCSGGGSCT----TCHHHHHTTC-------
T ss_pred cCCCCCCHHHHHHh----CCcHHHHHHHHHHhchh
Confidence 99999999998632 232 4455555555554
No 33
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=3.3e-34 Score=286.64 Aligned_cols=223 Identities=16% Similarity=0.072 Sum_probs=104.5
Q ss_pred hhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHH
Q 007515 72 VAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLH 151 (600)
Q Consensus 72 l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh 151 (600)
++.+|..|.||||+|+..|+.+++++|++.++++... +|.||||+|+..|+.+++++|++++.+++..+..|.||||
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~ 100 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL---ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALY 100 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC---TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHH
Confidence 4455555555555555555555555555555544322 2455555555555555555555554444433333333444
Q ss_pred HHHhcCCHHHHHHHHhcCccccccCCCCC-ChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Q 007515 152 VSAMAGHLDIVKELLEARQEFAWKKDLNG-HTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINII 230 (600)
Q Consensus 152 ~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g-~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v 230 (600)
+|+..|+.+++++|++.+.++. ..|..| .||||+|+..|+.+++++|++++++... ...
T Consensus 101 ~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~----------------- 160 (285)
T 3kea_A 101 YAVDSGNMQTVKLFVKKNWRLM-FYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD--LAI----------------- 160 (285)
T ss_dssp HHHHTTCHHHHHHHHHHCGGGG-GCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCC--CST-----------------
T ss_pred HHHHcCCHHHHHHHHhcCCCCC-ccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccc--ccC-----------------
Confidence 4444444444444444433333 333344 3444444444444444444444443311 113
Q ss_pred HHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChH-hHHHHhCCcHHHHHHHHhcCCC
Q 007515 231 DEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTI-LHLATAGKLTTMVIYLLKLGVD 309 (600)
Q Consensus 231 ~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~-Lh~A~~~~~~~iv~~Ll~~gad 309 (600)
|.||||+|+..|+.+++++|++. +.++|.+|..|+|| ||+|+..++.+++++|+++|++
T Consensus 161 -----------------g~t~L~~A~~~g~~~~v~~Ll~~---gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad 220 (285)
T 3kea_A 161 -----------------LLSCIHITIKNGHVDMMILLLDY---MTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDIN 220 (285)
T ss_dssp -----------------HHHHHHHHHHTTCHHHHHHHHHH---HHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBC
T ss_pred -----------------CccHHHHHHHcChHHHHHHHHHc---CCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCC
Confidence 44444444444444444444443 33344555555554 5555555555555555555555
Q ss_pred cccccCCCCCHHHHHhhhcCCcchhhHHHHHHHhccccc
Q 007515 310 VNAINRKGYTALDVVESDASNSGALQIVPALEEAGARRC 348 (600)
Q Consensus 310 ~n~~n~~G~T~l~~a~~~a~~~~~~~i~~~L~~~ga~~~ 348 (600)
++..|.. +...++.+++++|+++|++..
T Consensus 221 ~~~~~~~-----------a~~~~~~~iv~~Ll~~g~~~~ 248 (285)
T 3kea_A 221 IYSANLE-----------NVLLDDAEIAKMIIEKHVEYK 248 (285)
T ss_dssp STTTTGG-----------GGTTTCHHHHHHHHHHHHHHT
T ss_pred CCCCChh-----------hhhcCCHHHHHHHHHcCCCCC
Confidence 5555421 222344555555555555443
No 34
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.3e-33 Score=273.91 Aligned_cols=230 Identities=25% Similarity=0.303 Sum_probs=166.0
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHh
Q 007515 110 NRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCS 189 (600)
Q Consensus 110 ~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 189 (600)
|..|.|||+.|+..|+.+++++|++.+.+++..+..+.||||.|+..|+.+++++|++.+++.....+..|.||||+|+.
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~ 85 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATR 85 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHH
T ss_pred ccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHH
Confidence 34444444444444444444444444444444444444555555555555555555555555554455567788888888
Q ss_pred cCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCc-hhHHHHHH
Q 007515 190 KGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQ-YEAVKYLM 268 (600)
Q Consensus 190 ~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~-~~iv~~Ll 268 (600)
.|+.+++++|++.|+++.. .+..|.||||.|+..|+.++++.|++.+ ...+..+..|.||||+|+..++ .+++++|+
T Consensus 86 ~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~ 163 (240)
T 3eu9_A 86 QGHLSMVVQLMKYGADPSL-IDGEGCSCIHLAAQFGHTSIVAYLIAKG-QDVDMMDQNGMTPLMWAAYRTHSVDPTRLLL 163 (240)
T ss_dssp HTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHCCSSTTHHHHH
T ss_pred cCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCHHHHHHHHHhcC-CCccccCCCCCcHHHHHHHhCChHHHHHHHH
Confidence 8888888888888777654 6777888888888888888888888766 3566677788888888886655 78888888
Q ss_pred HhcccccccCCCCC-CCChHhHHHHhCCcHHHHHHHHhcCCCcccccCCCCCHHHHHhhhcCCcchhhHHHHHHHhcccc
Q 007515 269 ETLNITKLANMPDN-DGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARR 347 (600)
Q Consensus 269 ~~~~~~~~~n~~d~-~G~T~Lh~A~~~~~~~iv~~Ll~~gad~n~~n~~G~T~l~~a~~~a~~~~~~~i~~~L~~~ga~~ 347 (600)
+. +..++..+. .|+||||+|+..++.+++++|+++|++++.+|..|.||+++|. ..++.+++++|++.|++.
T Consensus 164 ~~---~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~----~~~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 164 TF---NVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAK----QRKNVWMINHLQEARQAK 236 (240)
T ss_dssp HT---TCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHH----HTTCHHHHHHHHHHC---
T ss_pred hc---CCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH----HcCcHHHHHHHHHhhhcc
Confidence 76 556788887 9999999999999999999999999999999999999999964 457889999999999876
Q ss_pred c
Q 007515 348 C 348 (600)
Q Consensus 348 ~ 348 (600)
.
T Consensus 237 ~ 237 (240)
T 3eu9_A 237 G 237 (240)
T ss_dssp -
T ss_pred C
Confidence 4
No 35
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=5.7e-34 Score=284.92 Aligned_cols=199 Identities=18% Similarity=0.142 Sum_probs=161.5
Q ss_pred cccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHH
Q 007515 139 LILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPL 218 (600)
Q Consensus 139 ~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL 218 (600)
++..+..|.||||+|+..|+.++++.|++.+.++. .. +|+||||+|+..|+.+++++|+++|+++.. .|..|.|||
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~t~L 99 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKN-LL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQ-FDDKGNTAL 99 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGS-CC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTC-CCTTSCCHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-CC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCcHH
Confidence 34445555666666666666666666666666654 22 488899999999999999999998888765 788899999
Q ss_pred HHHHHcCCHHHHHHHHhccccccccccccc-cchhhHhHhcCchhHHHHHHHhcccccccCCCCC-CCChHhHHHHhCCc
Q 007515 219 HWAAIKGRINIIDEILSLNLQSAEMRTIHG-ETVLHLTVKNNQYEAVKYLMETLNITKLANMPDN-DGNTILHLATAGKL 296 (600)
Q Consensus 219 ~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g-~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~-~G~T~Lh~A~~~~~ 296 (600)
|+|+..|+.+++++|++.+ ..++..+..| .||||+|+..|+.+++++|++.... . .|. .|+||||+|+..|+
T Consensus 100 ~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~---~--~~~~~g~t~L~~A~~~g~ 173 (285)
T 3kea_A 100 YYAVDSGNMQTVKLFVKKN-WRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS---T--FDLAILLSCIHITIKNGH 173 (285)
T ss_dssp HHHHHTTCHHHHHHHHHHC-GGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCT---T--CCCSTHHHHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHhcC-CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCc---c--ccccCCccHHHHHHHcCh
Confidence 9999999999999999886 4677778788 7999999999999999999887432 2 333 89999999999999
Q ss_pred HHHHHHHHhcCCCcccccCCCCCH-HHHHhhhcCCcchhhHHHHHHHhcccccCCC
Q 007515 297 TTMVIYLLKLGVDVNAINRKGYTA-LDVVESDASNSGALQIVPALEEAGARRCDQL 351 (600)
Q Consensus 297 ~~iv~~Ll~~gad~n~~n~~G~T~-l~~a~~~a~~~~~~~i~~~L~~~ga~~~~~~ 351 (600)
.+++++|+++|+++|.+|..|.|| |++|.. .++.+++++|+++|++.....
T Consensus 174 ~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~----~~~~~~v~~Ll~~gad~~~~~ 225 (285)
T 3kea_A 174 VDMMILLLDYMTSTNTNNSLLFIPDIKLAID----NKDIEMLQALFKYDINIYSAN 225 (285)
T ss_dssp HHHHHHHHHHHHHTCTTCCCBCCTTHHHHHH----HTCHHHHHHHTTSCBCSTTTT
T ss_pred HHHHHHHHHcCCCCCcccCCCCChHHHHHHH----cCCHHHHHHHHHcCCCCCCCC
Confidence 999999999999999999999998 999654 467899999999999877543
No 36
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-34 Score=290.55 Aligned_cols=275 Identities=17% Similarity=0.165 Sum_probs=224.1
Q ss_pred HHHHcCCHHHHHHHHhhchhhh-------hccCCCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHH
Q 007515 16 ETILRGDTQAFLSLIQQDEAKI-------KQTVPGSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACR 88 (600)
Q Consensus 16 ~A~~~gd~~~~~~ll~~~~~~l-------~~~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~ 88 (600)
.++..+..+.++.++....... ....+..|.|+||.||..|+.++|++|++.+.+ ++..|..|.||||+||.
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~ 82 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGAD-INYANVDGLTALHQACI 82 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCC-TTCBCTTCCBHHHHHHH
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHH
Confidence 3677788888888887654321 112234578999999999999999999999987 88899999999999999
Q ss_pred cCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhc
Q 007515 89 EGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEA 168 (600)
Q Consensus 89 ~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~ 168 (600)
.|+.+++++|++.++++. ..+..|.||||+|+..|+.+++++|++++.+++..+..|.||||.|+..++.++++.++..
T Consensus 83 ~g~~~~v~~Ll~~ga~~~-~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~ 161 (299)
T 1s70_B 83 DDNVDMVKFLVENGANIN-QPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNR 161 (299)
T ss_dssp TTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCC-CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhh
Confidence 999999999999998874 4588999999999999999999999999999988888899999999999999999998875
Q ss_pred CccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccc
Q 007515 169 RQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHG 248 (600)
Q Consensus 169 ~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g 248 (600)
........+..+.++++ ..+..++..+.......+..|.||||+|+..|+.++++.|++.+ .+++..|..|
T Consensus 162 ~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~d~~~~d~~g 232 (299)
T 1s70_B 162 QGVDIEAARKEEERIML--------RDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR-YDVNIKDYDG 232 (299)
T ss_dssp HTCCHHHHHHHHHHHHH--------HHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCCCTTC
T ss_pred cCCCchhhhhhhhhHHH--------HHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC-CCCCCcCCCC
Confidence 43322122222222322 34455666666655657788999999999999999999999877 5678888999
Q ss_pred cchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHh
Q 007515 249 ETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLK 305 (600)
Q Consensus 249 ~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~ 305 (600)
.||||+|+..|+.+++++|++. +.+++.+|..|+||||+|++. ..+.++.|++
T Consensus 233 ~tpL~~A~~~~~~~~v~~Ll~~---gad~~~~d~~g~t~l~~A~~~-~~~~l~~l~~ 285 (299)
T 1s70_B 233 WTPLHAAAHWGKEEACRILVEN---LCDMEAVNKVGQTAFDVADED-ILGYLEELQK 285 (299)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCTTTSCCSG-GGHHHHHHHH
T ss_pred CcHHHHHHhcCCHHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHH-HHHHHHHHHH
Confidence 9999999999999999999987 667899999999999999653 4455555553
No 37
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.2e-33 Score=271.66 Aligned_cols=215 Identities=22% Similarity=0.270 Sum_probs=122.3
Q ss_pred CCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcC
Q 007515 90 GRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEAR 169 (600)
Q Consensus 90 g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~ 169 (600)
|+.+++++|++.++++....+..|.||||+|+..|+.+++++|++++.+++..+..+.||||.|+..|+.+++++|++.+
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 81 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR 81 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBT
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 45555566666666555555556666666666666666666666655555444444455555555555555555555555
Q ss_pred ccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccc
Q 007515 170 QEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGE 249 (600)
Q Consensus 170 ~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 249 (600)
+......|..|.||||+|+..|+.+++++|++.++++.. .|..|.||||+|+..|+.+++++|++.+ ...+..|..|.
T Consensus 82 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~ 159 (223)
T 2f8y_A 82 ATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA-VDDLGKSALHWAAAVNNVDAAVVLLKNG-ANKDMQNNREE 159 (223)
T ss_dssp TSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-BCTTSCBHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCC
T ss_pred CCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcC-cCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCc
Confidence 433335555666666666666666666666666666543 4556666666666666666666666654 34444455555
Q ss_pred chhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCCC
Q 007515 250 TVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVD 309 (600)
Q Consensus 250 t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad 309 (600)
||||+|+..++.+++++|++. +.+++.+|..|.||||+|+..++.+++++|+++|+.
T Consensus 160 t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 160 TPLFLAAREGSYETAKVLLDH---FANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred CHHHHHHHcCCHHHHHHHHHc---CCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 555555555555555555554 334555555566666666666655555555555554
No 38
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=3.2e-35 Score=299.96 Aligned_cols=260 Identities=17% Similarity=0.104 Sum_probs=205.8
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccc---------------
Q 007515 44 SLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYK--------------- 108 (600)
Q Consensus 44 ~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~--------------- 108 (600)
.+.+|+| ..+.++|++|++.+.+ ++..+..|.|+++ |+.++|+.|++++.+....
T Consensus 22 ~~~~~~~----~~~~dlv~~ll~~ga~-i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~ 91 (327)
T 1sw6_A 22 RTAGPII----TFTHDLTSDFLSSPLK-IMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNS 91 (327)
T ss_dssp ---CCEE----ECCTTCCCSTTTSSCC-CEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------
T ss_pred ccccchh----hhcCchHHHHhhCCcc-cccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccc
Confidence 3455666 4566889999999887 7888899999988 9999999999887553220
Q ss_pred -cCCCCCcHHHHHHHhCCHHHHHHHHhCCccccc-ccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHH
Q 007515 109 -LNRDNESVLYVACERGRLDVAKQLLNYSSLLIL-EVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHL 186 (600)
Q Consensus 109 -~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~-~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~ 186 (600)
......+.+|+|+..+..+++++|++.+.+++. .+..|.||||+|+..|+.+++++|++.+.++. .+|..|+||||+
T Consensus 92 ~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n-~~d~~g~TpLh~ 170 (327)
T 1sw6_A 92 EGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRL-YGDNMGESCLVK 170 (327)
T ss_dssp ------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-BCCTTCCCHHHH
T ss_pred cccCCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHH
Confidence 111122345888888889999999999999998 78889999999999999999999999998887 889999999999
Q ss_pred HHhcCc---HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHH----cCCHHHHHHHHhcc-------------------ccc
Q 007515 187 SCSKGH---LEITRELLKLDPDLSSLPDNEGRTPLHWAAI----KGRINIIDEILSLN-------------------LQS 240 (600)
Q Consensus 187 A~~~g~---~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~----~g~~~~v~~Ll~~~-------------------~~~ 240 (600)
|+..|+ .++++.|++.+.......|..|+||||+|+. .|+.++++.|++.+ ...
T Consensus 171 A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~ 250 (327)
T 1sw6_A 171 AVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESK 250 (327)
T ss_dssp HHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-------
T ss_pred HHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCC
Confidence 999998 6777888877633234578999999999999 89999999999874 456
Q ss_pred cccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCCCcccccCCCCCH
Q 007515 241 AEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTA 320 (600)
Q Consensus 241 ~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad~n~~n~~G~T~ 320 (600)
++.++..|.||||.|+. +++|++. .+|.+|.+|+||||+|+..|+.+++++|+++|+|++.+|.+|+||
T Consensus 251 ~~~~~~~g~t~L~~a~~------~~~Ll~~-----~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~Tp 319 (327)
T 1sw6_A 251 PNDKNGERKDSILENLD------LKWIIAN-----MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRP 319 (327)
T ss_dssp ---------CHHHHHCS------HHHHHHH-----TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCG
T ss_pred cccccccCCChhHHHHH------HHHHHHh-----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCH
Confidence 77888999999999996 8888886 489999999999999999999999999999999999999999999
Q ss_pred HHHHh
Q 007515 321 LDVVE 325 (600)
Q Consensus 321 l~~a~ 325 (600)
||+|.
T Consensus 320 L~~A~ 324 (327)
T 1sw6_A 320 VDFGA 324 (327)
T ss_dssp GGGTC
T ss_pred HHHHH
Confidence 99964
No 39
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=6.8e-33 Score=266.35 Aligned_cols=214 Identities=20% Similarity=0.236 Sum_probs=163.8
Q ss_pred CCHHHHHHHHhhchhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHh
Q 007515 21 GDTQAFLSLIQQDEAKIKQTVPGSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVG 100 (600)
Q Consensus 21 gd~~~~~~ll~~~~~~l~~~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~ 100 (600)
|+.+.++.+++.+.. +....+..|.||||+||..|+.+++++|++.+.+ ++..|..|.||||+|+..|+.+++++|++
T Consensus 2 g~~~~i~~Ll~~g~~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 79 (223)
T 2f8y_A 2 DAPAVISDFIYQGAS-LHNQTDRTGETALHLAARYSRSDAAKRLLEASAD-ANIQDNMGRTPLHAAVSADAQGVFQILIR 79 (223)
T ss_dssp ---CCEETTEETTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCC-cccccCCCCCchHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 455666667766654 3344567788888888888888888888888776 67788888888888888888888888888
Q ss_pred CCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCC
Q 007515 101 IDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNG 180 (600)
Q Consensus 101 ~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g 180 (600)
.++......+..|.||||+|+..|+.+++++|++++.+++..+..+.||||.|+..|+.+++++|++.+.++. ..|..|
T Consensus 80 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g 158 (223)
T 2f8y_A 80 NRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD-MQNNRE 158 (223)
T ss_dssp BTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTC
T ss_pred cCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCC
Confidence 8775556667888888888888888888888888888777777777778888888888888888887777665 667777
Q ss_pred ChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccc
Q 007515 181 HTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNL 238 (600)
Q Consensus 181 ~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~ 238 (600)
.||||+|+..|+.+++++|+++|+++.. .|..|.||||+|+..|+.+++++|++.+.
T Consensus 159 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~~~i~~~L~~~g~ 215 (223)
T 2f8y_A 159 ETPLFLAAREGSYETAKVLLDHFANRDI-TDHMDRLPRDIAQERMHHDIVRLLDEYNL 215 (223)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cCHHHHHHHcCCHHHHHHHHHcCCCCcc-ccccCCCHHHHHHHhcchHHHHHHHHcCC
Confidence 7888888888888888888887777644 67777788888888888888877777663
No 40
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.98 E-value=1.3e-31 Score=259.08 Aligned_cols=206 Identities=20% Similarity=0.215 Sum_probs=155.2
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccc----cccCCCCCcHHHH
Q 007515 44 SLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVI----YKLNRDNESVLYV 119 (600)
Q Consensus 44 ~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~----~~~~~~g~tpL~~ 119 (600)
.|+||||+||..|+.+++++|++..+..++.+|..|.||||+|+..|+.+++++|++.++++. ...+..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 478999999999999999999998444489999999999999999999999999999998764 3456789999999
Q ss_pred HHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHH
Q 007515 120 ACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITREL 199 (600)
Q Consensus 120 A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 199 (600)
|+..|+.+++++|++++.+++..+... .++. .....|..|.||||+|+..|+.+++++|
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~--~~~~-------------------~~~~~~~~g~t~L~~A~~~~~~~~v~~L 140 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGS--VFHY-------------------RPHNLIYYGEHPLSFAACVGSEEIVRLL 140 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSG--GGSC-------------------CTTCSCCCCSSHHHHHHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCc--ceee-------------------cccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999999998876544321 1100 1123455677777777777777777777
Q ss_pred HhcCCCCCCCCCCCCCCHHHHHHHcCCHHHH----HHHHhcccccc-----ccccccccchhhHhHhcCchhHHHHHHHh
Q 007515 200 LKLDPDLSSLPDNEGRTPLHWAAIKGRINII----DEILSLNLQSA-----EMRTIHGETVLHLTVKNNQYEAVKYLMET 270 (600)
Q Consensus 200 l~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v----~~Ll~~~~~~~-----~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~ 270 (600)
+++|+++.. .|..|.||||+|+..|+.+++ +.|++.+.... +.+|..|+||||+|+++|+.+++++|+++
T Consensus 141 l~~ga~~~~-~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~ 219 (232)
T 2rfa_A 141 IEHGADIRA-QDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQK 219 (232)
T ss_dssp HHTTCCTTC-CCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHCCCCCCC-CCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 777776644 566777777777777777666 66666654332 45666777777777777777777777766
Q ss_pred c
Q 007515 271 L 271 (600)
Q Consensus 271 ~ 271 (600)
.
T Consensus 220 g 220 (232)
T 2rfa_A 220 R 220 (232)
T ss_dssp H
T ss_pred C
Confidence 3
No 41
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=2.9e-32 Score=264.59 Aligned_cols=222 Identities=21% Similarity=0.275 Sum_probs=154.9
Q ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHHhCch---hhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcH
Q 007515 40 TVPGSLNTILHLTARFGHEELASEILKLCPE---MVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESV 116 (600)
Q Consensus 40 ~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~---~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tp 116 (600)
..+..|+||||+|+..|+.+++++|++.+.. .++.+|..|.||||+|+..|+.+++++|++.++++. ..+..|.||
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~ 81 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPE-LRDFRGNTP 81 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSC-CCCTTCCCH
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCH
Confidence 3566788888888888888888888887653 367788888888888888888888888888887764 347788888
Q ss_pred HHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHH
Q 007515 117 LYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEIT 196 (600)
Q Consensus 117 L~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv 196 (600)
||+|+..|+.+++++|++.+.+... .......|..|.||||+|+..|+.+++
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~----------------------------~~~~~~~~~~g~t~L~~A~~~~~~~~v 133 (236)
T 1ikn_D 82 LHLACEQGCLASVGVLTQSCTTPHL----------------------------HSILKATNYNGHTCLHLASIHGYLGIV 133 (236)
T ss_dssp HHHHHHHTCHHHHHHHHHSTTTTSS----------------------------SCGGGCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHhcccchhH----------------------------HHHhhccCCCCCCHHHHHHHcCCHHHH
Confidence 8888888888888888887654211 111235566677777777777777777
Q ss_pred HHHHhcCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhccccc
Q 007515 197 RELLKLDPDLSSLPDN-EGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITK 275 (600)
Q Consensus 197 ~~Ll~~~~~~~~~~d~-~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~ 275 (600)
++|++.|+++.. .+. .|.||||+|+..|+.+++++|++.+ ..++.+|..|.||||+|+.+++.+++++|++.+.. .
T Consensus 134 ~~Ll~~g~~~~~-~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~-~ 210 (236)
T 1ikn_D 134 ELLVSLGADVNA-QEPCNGRTALHLAVDLQNPDLVSLLLKCG-ADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE-N 210 (236)
T ss_dssp HHHHHHTCCTTC-CCTTTCCCHHHHHHHTTCHHHHHHHHTTT-CCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG-G
T ss_pred HHHHHcCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcccCCCCCHHHHHHccCchHHHHHHHHcchh-h
Confidence 777777777655 444 7777777777777777777777765 45666777777777777777777777777776432 2
Q ss_pred ccCCCCCCCChHhHHHHh
Q 007515 276 LANMPDNDGNTILHLATA 293 (600)
Q Consensus 276 ~~n~~d~~G~T~Lh~A~~ 293 (600)
....++.+|.||.+.+..
T Consensus 211 ~~~~~~~~~~~~~~~~~~ 228 (236)
T 1ikn_D 211 LQMLPESEDEESYDTESE 228 (236)
T ss_dssp GSSCCCCCTTTCCCCC--
T ss_pred hhcCCccchHHHHhhhcc
Confidence 344667777777665543
No 42
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=2.2e-32 Score=265.41 Aligned_cols=211 Identities=22% Similarity=0.236 Sum_probs=119.6
Q ss_pred cCCCCCcHhHHHHHcCCHHHHHHHHhCCcc---cccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHH
Q 007515 75 ENEKMETPLHEACREGRLNFVKLFVGIDPS---VIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLH 151 (600)
Q Consensus 75 ~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~---~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh 151 (600)
.|..|.||||+|+..|+.++++.|++.+.. .....+..|.||||+|+..|+.+++++|++++.+++
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------- 72 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPE----------- 72 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSC-----------
T ss_pred CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----------
Confidence 455666666666666666666666655432 123334455555555555555555555554443332
Q ss_pred HHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCC-----CCCCCCCCCCHHHHHHHcCC
Q 007515 152 VSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDL-----SSLPDNEGRTPLHWAAIKGR 226 (600)
Q Consensus 152 ~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~-----~~~~d~~g~tpL~~Aa~~g~ 226 (600)
..|..|+||||+|+..|+.+++++|++.+++. ....+..|.||||+|+..|+
T Consensus 73 -----------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~ 129 (236)
T 1ikn_D 73 -----------------------LRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGY 129 (236)
T ss_dssp -----------------------CCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTC
T ss_pred -----------------------CcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCC
Confidence 33445555555555555566666666555432 12345566677777777777
Q ss_pred HHHHHHHHhccccccccccc-cccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHh
Q 007515 227 INIIDEILSLNLQSAEMRTI-HGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLK 305 (600)
Q Consensus 227 ~~~v~~Ll~~~~~~~~~~~~-~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~ 305 (600)
.+++++|++.+ ..++..+. .|.||||+|+..|+.+++++|++. +.+++.+|..|.||||+|+..++.+++++|++
T Consensus 130 ~~~v~~Ll~~g-~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~ 205 (236)
T 1ikn_D 130 LGIVELLVSLG-ADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKC---GADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQ 205 (236)
T ss_dssp HHHHHHHHHHT-CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTT---TCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHT
T ss_pred HHHHHHHHHcC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCcccCCCCCHHHHHHccCchHHHHHHHH
Confidence 77776666665 34444444 666666666666666666666665 44566666666666666666666666666666
Q ss_pred cCCCcc--cccCCCCCHHHH
Q 007515 306 LGVDVN--AINRKGYTALDV 323 (600)
Q Consensus 306 ~gad~n--~~n~~G~T~l~~ 323 (600)
+|++.. ..+.+|.||.+.
T Consensus 206 ~ga~~~~~~~~~~~~~~~~~ 225 (236)
T 1ikn_D 206 LTLENLQMLPESEDEESYDT 225 (236)
T ss_dssp TSCGGGSSCCCCCTTTCCCC
T ss_pred cchhhhhcCCccchHHHHhh
Confidence 666555 556666666554
No 43
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=9e-31 Score=253.22 Aligned_cols=202 Identities=22% Similarity=0.263 Sum_probs=116.5
Q ss_pred CCCcHhHHHHHcCCHHHHHHHHhC-CcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhc
Q 007515 78 KMETPLHEACREGRLNFVKLFVGI-DPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMA 156 (600)
Q Consensus 78 ~g~TpLh~Aa~~g~~~iv~~Ll~~-~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~ 156 (600)
.|+||||+|++.|+.++++.|++. +.++ ...|..|.||||+|+..|+.+++++|++++.+....
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-------------- 66 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEV-HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFE-------------- 66 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGC--------------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCc-ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccc--------------
Confidence 366777777777777777777665 4333 334666666666666666666666666655543210
Q ss_pred CCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCC------------CCCCCCHHHHHHHc
Q 007515 157 GHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLP------------DNEGRTPLHWAAIK 224 (600)
Q Consensus 157 g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~------------d~~g~tpL~~Aa~~ 224 (600)
.....|..|+||||+|+..|+.+++++|+++|+++.... |..|.||||+|+..
T Consensus 67 ---------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 131 (232)
T 2rfa_A 67 ---------------PMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACV 131 (232)
T ss_dssp ---------------CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHH
T ss_pred ---------------cccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHc
Confidence 012456678888888888888888888888877765421 22455666666666
Q ss_pred CCHHHHHHHHhccccccccccccccchhhHhHhcCchhHH----HHHHHhcccc---cccCCCCCCCChHhHHHHhCCcH
Q 007515 225 GRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAV----KYLMETLNIT---KLANMPDNDGNTILHLATAGKLT 297 (600)
Q Consensus 225 g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv----~~Ll~~~~~~---~~~n~~d~~G~T~Lh~A~~~~~~ 297 (600)
|+.+++++|++.+ .+++.+|..|+||||+|+..++.+++ ++|++..... ...+.+|..|+||||+|+..|+.
T Consensus 132 ~~~~~v~~Ll~~g-a~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~ 210 (232)
T 2rfa_A 132 GSEEIVRLLIEHG-ADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNI 210 (232)
T ss_dssp TCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCH
T ss_pred CCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCH
Confidence 6666666655554 34445555555555555555555554 4444442211 01134555555555555555555
Q ss_pred HHHHHHHhcCCCc
Q 007515 298 TMVIYLLKLGVDV 310 (600)
Q Consensus 298 ~iv~~Ll~~gad~ 310 (600)
+++++|+++|++.
T Consensus 211 ~~v~~Ll~~g~~~ 223 (232)
T 2rfa_A 211 VMFQHLMQKRKHI 223 (232)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHhcCccc
Confidence 5555555555443
No 44
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=1.4e-32 Score=280.39 Aligned_cols=255 Identities=10% Similarity=0.029 Sum_probs=198.8
Q ss_pred cCCHHHHHHHHhhchhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhc-----------------cCCCCCcH
Q 007515 20 RGDTQAFLSLIQQDEAKIKQTVPGSLNTILHLTARFGHEELASEILKLCPEMVAA-----------------ENEKMETP 82 (600)
Q Consensus 20 ~gd~~~~~~ll~~~~~~l~~~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~-----------------~n~~g~Tp 82 (600)
....+.++.+++++... ...+..|.|++| |+.++|+.|++.+.+ .+. +.....+.
T Consensus 29 ~~~~dlv~~ll~~ga~i--~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 100 (327)
T 1sw6_A 29 TFTHDLTSDFLSSPLKI--MKALPSPVVNDN-----EQKMKLEAFLQRLLF-PEIQEMPTSLNNDSSNRNSEGGSSNQQQ 100 (327)
T ss_dssp ECCTTCCCSTTTSSCCC--EECBCCCCCCCH-----HHHHHHHHHHHHHHC-----------------------------
T ss_pred hhcCchHHHHhhCCccc--ccCCCCCCcccC-----chhHHHHHHHHhccC-CccccchHhhhcccccccccccCCccch
Confidence 34445566677666443 334677899988 999999999998744 111 11112234
Q ss_pred hHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCC---H
Q 007515 83 LHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGH---L 159 (600)
Q Consensus 83 Lh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~---~ 159 (600)
+|.|+..+..+++++|++.+.++....+..|.||||+|+..|+.+++++|++++++++..+..|.||||+|+..|+ .
T Consensus 101 ~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~ 180 (327)
T 1sw6_A 101 QHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDS 180 (327)
T ss_dssp ---CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHT
T ss_pred hHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccH
Confidence 5888888889999999999998876569999999999999999999999999999999888999999999999998 6
Q ss_pred HHHHHHHhcCccccccCCCCCChHHHHHHh----cCcHHHHHHHHhc--------------------CCCCCCCCCCCCC
Q 007515 160 DIVKELLEARQEFAWKKDLNGHTPLHLSCS----KGHLEITRELLKL--------------------DPDLSSLPDNEGR 215 (600)
Q Consensus 160 ~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~----~g~~~iv~~Ll~~--------------------~~~~~~~~d~~g~ 215 (600)
++++.|++......+..|..|+||||+|+. .|+.+++++|++. ++++.. .+..|.
T Consensus 181 ~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~-~~~~g~ 259 (327)
T 1sw6_A 181 GTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPND-KNGERK 259 (327)
T ss_dssp TCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------------
T ss_pred HHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCccc-ccccCC
Confidence 888888888744445889999999999999 8999999999987 677655 789999
Q ss_pred CHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCC
Q 007515 216 TPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGK 295 (600)
Q Consensus 216 tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~ 295 (600)
||||.|+. +++|++. .++.+|..|+||||+|+.+|+.+++++|++. +.+++.+|.+|+||||+|++.|
T Consensus 260 t~L~~a~~------~~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~---Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 260 DSILENLD------LKWIIAN---MLNAQDSNGDTCLNIAARLGNISIVDALLDY---GADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp CHHHHHCS------HHHHHHH---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHT---TCCTTCCCTTSCCGGGGTCC--
T ss_pred ChhHHHHH------HHHHHHh---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCcccCCCCCCHHHHHHhcC
Confidence 99999985 8888887 4778899999999999999999999999988 7789999999999999998764
No 45
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=2e-30 Score=244.91 Aligned_cols=192 Identities=22% Similarity=0.288 Sum_probs=151.4
Q ss_pred CChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcC
Q 007515 146 LTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKG 225 (600)
Q Consensus 146 ~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g 225 (600)
+.||||.|+..|+.+.++.|++.++...+..|.+|+||||+|+..|+.+++++|++.|+++.. .+..|.||||+|+..|
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~ 83 (201)
T 3hra_A 5 EVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINL-QNSISDSPYLYAGAQG 83 (201)
T ss_dssp CTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTT
T ss_pred cccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcC
Confidence 445777777777777777777777644446777888888888888888888888888887755 6778888888888888
Q ss_pred CHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCc-----HHHH
Q 007515 226 RINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKL-----TTMV 300 (600)
Q Consensus 226 ~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~-----~~iv 300 (600)
+.+++++|++.++...+..+..|.||||+|+..++.+++++|++.. ..+++.+|..|+||||+|+..++ .+++
T Consensus 84 ~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v 161 (201)
T 3hra_A 84 RTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDG--REDIDFQNDFGYTALIEAVGLREGNQLYQDIV 161 (201)
T ss_dssp CHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHC--CCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHH
T ss_pred CHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcC--CCCcCCCCCCCCCHHHHHHHhccchhhHHHHH
Confidence 8888888887776777778888888888888888888888888773 14677888888888888888776 7888
Q ss_pred HHHHhcCCCcccccCCCCCHHHHHhhhcCCcchhhHHHHHHHhc
Q 007515 301 IYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAG 344 (600)
Q Consensus 301 ~~Ll~~gad~n~~n~~G~T~l~~a~~~a~~~~~~~i~~~L~~~g 344 (600)
++|+++|++++.+|..|.|||++|.. .++.+++++|+++|
T Consensus 162 ~~Ll~~ga~~~~~~~~g~t~l~~A~~----~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 162 KLLMENGADQSIKDNSGRTAMDYANQ----KGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHH----HTCHHHHHHHHTCC
T ss_pred HHHHHCCCCCCccCCCCCCHHHHHHH----cCCHhHHHHHHhcC
Confidence 88888888888888888888888544 46677888887765
No 46
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=5.3e-30 Score=241.94 Aligned_cols=193 Identities=24% Similarity=0.196 Sum_probs=155.3
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHH
Q 007515 43 GSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACE 122 (600)
Q Consensus 43 ~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 122 (600)
..+.|+||.||..|+.+.++.|++.++..++..|..|.||||+|+..|+.+++++|++.++++. ..+..|.||||+|+.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~ 81 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADIN-LQNSISDSPYLYAGA 81 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHH
Confidence 3567889999999999999999888875588888888999999999999999999998888764 347788888888888
Q ss_pred hCCHHHHHHHH-hCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCc-----HHHH
Q 007515 123 RGRLDVAKQLL-NYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGH-----LEIT 196 (600)
Q Consensus 123 ~g~~e~v~~Ll-~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~-----~~iv 196 (600)
.|+.+++++|+ ..+.+++..+..+.||||.|+..|+.+++++|++.++...+..|..|+||||+|+..++ .+++
T Consensus 82 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v 161 (201)
T 3hra_A 82 QGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIV 161 (201)
T ss_dssp TTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHH
T ss_pred cCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHH
Confidence 88888888888 45556666666777788888888888888888888744444777788888888887776 7888
Q ss_pred HHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcc
Q 007515 197 RELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLN 237 (600)
Q Consensus 197 ~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~ 237 (600)
++|+++|+++.. +|..|.||||+|+..|+.+++++|++.+
T Consensus 162 ~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 162 KLLMENGADQSI-KDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHCCCCCCc-cCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 888888887754 6778888888888888888888887653
No 47
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=2.3e-30 Score=257.03 Aligned_cols=223 Identities=17% Similarity=0.209 Sum_probs=159.6
Q ss_pred hhccCCCCCcHhHHHHHcCCHHHHHHHHh----CCcccc---cccCCCCCcHHHHHHHh---CCHHHHHHHHhCCccccc
Q 007515 72 VAAENEKMETPLHEACREGRLNFVKLFVG----IDPSVI---YKLNRDNESVLYVACER---GRLDVAKQLLNYSSLLIL 141 (600)
Q Consensus 72 l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~----~~~~~~---~~~~~~g~tpL~~A~~~---g~~e~v~~Ll~~~~~~~~ 141 (600)
.+..|..|.||||.||+.|+.++|+.|++ .+.++. ...+..|.||||+|+.. |+.+++++|++++++...
T Consensus 6 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~ 85 (273)
T 2pnn_A 6 EKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDS 85 (273)
T ss_dssp -----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTC
T ss_pred CCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccc
Confidence 45678889999999999999998888886 343332 13477899999999976 889999999887764321
Q ss_pred ccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCC---------
Q 007515 142 EVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDN--------- 212 (600)
Q Consensus 142 ~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~--------- 212 (600)
++.+++... ...|..|+||||+|+..|+.+++++|+++|+++.. .+.
T Consensus 86 --------------------~~~~i~~~~---~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~~~~~~~~ 141 (273)
T 2pnn_A 86 --------------------LKQFVNASY---TDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA-AANGDFFKKTKG 141 (273)
T ss_dssp --------------------HHHHHTCCC---CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBCSGGGSSCSS
T ss_pred --------------------hhHHhhccc---ccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc-cccccccccccc
Confidence 112222211 13567899999999999999999999999888765 444
Q ss_pred -----CCCCHHHHHHHcCCHHHHHHHHhc--cccccccccccccchhhHhHhcCc---------hhHHHHHHHhcccccc
Q 007515 213 -----EGRTPLHWAAIKGRINIIDEILSL--NLQSAEMRTIHGETVLHLTVKNNQ---------YEAVKYLMETLNITKL 276 (600)
Q Consensus 213 -----~g~tpL~~Aa~~g~~~~v~~Ll~~--~~~~~~~~~~~g~t~Lh~Av~~~~---------~~iv~~Ll~~~~~~~~ 276 (600)
.|.||||+|+..|+.+++++|++. .+.+++.+|..|+||||+|+..++ .+++++|++. +.+
T Consensus 142 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~---ga~ 218 (273)
T 2pnn_A 142 RPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILIL---GAK 218 (273)
T ss_dssp SCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH---HHH
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHh---hhh
Confidence 688888888888888888888883 335677888888888888888877 6888888877 444
Q ss_pred cC-------CCCCCCChHhHHHHhCCcHHHHHHHHhcCC-CcccccCCCCCHH
Q 007515 277 AN-------MPDNDGNTILHLATAGKLTTMVIYLLKLGV-DVNAINRKGYTAL 321 (600)
Q Consensus 277 ~n-------~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga-d~n~~n~~G~T~l 321 (600)
+| .+|.+|+||||+|+..|+.+++++|+++|+ |+......+.+|-
T Consensus 219 ~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~ 271 (273)
T 2pnn_A 219 LHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHH 271 (273)
T ss_dssp HCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC-------------
T ss_pred cccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhcc
Confidence 44 588899999999999999999999999888 7877777766654
No 48
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=1.5e-30 Score=258.28 Aligned_cols=210 Identities=18% Similarity=0.206 Sum_probs=144.9
Q ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHHhCch---hhh----ccCCCCCcHhHHHHHc---CCHHHHHHHHhCCcccc---
Q 007515 40 TVPGSLNTILHLTARFGHEELASEILKLCPE---MVA----AENEKMETPLHEACRE---GRLNFVKLFVGIDPSVI--- 106 (600)
Q Consensus 40 ~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~---~l~----~~n~~g~TpLh~Aa~~---g~~~iv~~Ll~~~~~~~--- 106 (600)
..+..|.|+||.||+.|+.++|+.|++.+.+ .++ ..|..|.||||+|+.. |+.+++++|++.+++..
T Consensus 8 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~ 87 (273)
T 2pnn_A 8 PPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLK 87 (273)
T ss_dssp ---CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHH
T ss_pred CCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchh
Confidence 4567899999999999999999999985321 122 4588999999999987 99999999999876531
Q ss_pred ---c----ccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCC
Q 007515 107 ---Y----KLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLN 179 (600)
Q Consensus 107 ---~----~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~ 179 (600)
. ..|..|.||||+|+..|+.+++++|++++.+++..+..+. + ........+..
T Consensus 88 ~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~--~------------------~~~~~~~~~~~ 147 (273)
T 2pnn_A 88 QFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDF--F------------------KKTKGRPGFYF 147 (273)
T ss_dssp HHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGG--G------------------SSCSSSCCCCS
T ss_pred HHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccc--c------------------ccccccccccC
Confidence 1 1456899999999999999999999999888776554220 0 00011133445
Q ss_pred CChHHHHHHhcCcHHHHHHHHh---cCCCCCCCCCCCCCCHHHHHHHcCC---------HHHHHHHHhcccccc------
Q 007515 180 GHTPLHLSCSKGHLEITRELLK---LDPDLSSLPDNEGRTPLHWAAIKGR---------INIIDEILSLNLQSA------ 241 (600)
Q Consensus 180 g~tpLh~A~~~g~~~iv~~Ll~---~~~~~~~~~d~~g~tpL~~Aa~~g~---------~~~v~~Ll~~~~~~~------ 241 (600)
|.||||+|+..|+.+++++|++ .|+++.. +|.+|+||||+|+..|+ .++++.|++.+.+..
T Consensus 148 g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~-~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~ 226 (273)
T 2pnn_A 148 GELPLSLAACTNQLAIVKFLLQNSWQPADISA-RDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLE 226 (273)
T ss_dssp CBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC-CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGG
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccCCCCcee-eCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccc
Confidence 6666666666666666666666 6666544 56666677776666666 566666666653221
Q ss_pred ccccccccchhhHhHhcCchhHHHHHHHh
Q 007515 242 EMRTIHGETVLHLTVKNNQYEAVKYLMET 270 (600)
Q Consensus 242 ~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~ 270 (600)
+.+|..|+||||+|++.|+.+++++|++.
T Consensus 227 ~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 255 (273)
T 2pnn_A 227 EITNRKGLTPLALAASSGKIGVLAYILQR 255 (273)
T ss_dssp GCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHhChHHHHHHHHHC
Confidence 24566666777777777777777776666
No 49
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=2.3e-30 Score=254.37 Aligned_cols=204 Identities=20% Similarity=0.184 Sum_probs=146.9
Q ss_pred CCcHHHHHHHhCCHH----HHHHHHHhCchhhhc----cCCCCCcHhHHHHHc---CCHHHHHHHHhCCcccccc-----
Q 007515 45 LNTILHLTARFGHEE----LASEILKLCPEMVAA----ENEKMETPLHEACRE---GRLNFVKLFVGIDPSVIYK----- 108 (600)
Q Consensus 45 g~T~Lh~Aa~~g~~e----~v~~Ll~~~~~~l~~----~n~~g~TpLh~Aa~~---g~~~iv~~Ll~~~~~~~~~----- 108 (600)
|+||||.||..|+.+ ++++|++.+.+ ++. +|..|.||||+|+.. |+.+++++|++.+++....
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~-i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKY-LTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCC-TTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCC-cccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 789999999999997 55666667776 565 899999999999999 9999999999988765321
Q ss_pred -----cCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChH
Q 007515 109 -----LNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTP 183 (600)
Q Consensus 109 -----~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tp 183 (600)
.|..|.||||+|+..|+.+++++|++++.+++..+..+..+ .+ ....|..|.||
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~--------------------~~-~~~~~~~g~tp 139 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQ--------------------KH-QGTCFYFGELP 139 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGS--------------------CC-SSSCCCSCSSH
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccccccccc--------------------cc-ccccccCCCCH
Confidence 24679999999999999999999999988877655442100 00 11233446777
Q ss_pred HHHHHhcCcHHHHHHHHh---cCCCCCCCCCCCCCCHHHHHHH--cCCHH-------HHHHHHhcccccc------cccc
Q 007515 184 LHLSCSKGHLEITRELLK---LDPDLSSLPDNEGRTPLHWAAI--KGRIN-------IIDEILSLNLQSA------EMRT 245 (600)
Q Consensus 184 Lh~A~~~g~~~iv~~Ll~---~~~~~~~~~d~~g~tpL~~Aa~--~g~~~-------~v~~Ll~~~~~~~------~~~~ 245 (600)
||+|+..|+.+++++|++ .|+++.. +|.+|+||||+|+. .++.+ +++.|++.+.+.. +.+|
T Consensus 140 L~~A~~~~~~~~v~~Ll~~~~~ga~~n~-~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d 218 (256)
T 2etb_A 140 LSLAACTKQWDVVTYLLENPHQPASLEA-TDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISN 218 (256)
T ss_dssp HHHHHHTTCHHHHHHHHHCSSCCCCTTC-CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCC
T ss_pred HHHHHHcCCHHHHHHHHhccccCCCcCc-cCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccC
Confidence 777777777777777777 6666644 56667777777776 66666 7777776653221 5666
Q ss_pred ccccchhhHhHhcCchhHHHHHHHhc
Q 007515 246 IHGETVLHLTVKNNQYEAVKYLMETL 271 (600)
Q Consensus 246 ~~g~t~Lh~Av~~~~~~iv~~Ll~~~ 271 (600)
..|+||||+|++.|+.+++++|+++.
T Consensus 219 ~~g~tpL~~A~~~g~~~~v~~Ll~~g 244 (256)
T 2etb_A 219 HQGLTPLKLAAKEGKIEIFRHILQRE 244 (256)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHhCC
Confidence 67777777777777777777777663
No 50
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=5e-30 Score=252.04 Aligned_cols=205 Identities=20% Similarity=0.180 Sum_probs=127.0
Q ss_pred CCCcHhHHHHHcCCHH----HHHHHHhCCccccc---ccCCCCCcHHHHHHHh---CCHHHHHHHHhCCcccccccCCCC
Q 007515 78 KMETPLHEACREGRLN----FVKLFVGIDPSVIY---KLNRDNESVLYVACER---GRLDVAKQLLNYSSLLILEVDGLT 147 (600)
Q Consensus 78 ~g~TpLh~Aa~~g~~~----iv~~Ll~~~~~~~~---~~~~~g~tpL~~A~~~---g~~e~v~~Ll~~~~~~~~~~~~~~ 147 (600)
.|+||||.|+..|+.+ ++++|++.+.++.. ..+..|.||||+|+.. |+.+++++|++.+.+.+....
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~--- 77 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKP--- 77 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSC---
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhh---
Confidence 3677888888888876 45556666666644 2577777777777777 777777777776655432110
Q ss_pred hHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCC-------------C
Q 007515 148 TSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNE-------------G 214 (600)
Q Consensus 148 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~-------------g 214 (600)
++.. . ....|..|.||||+|+..|+.+++++|+++|+++.. .+.. |
T Consensus 78 -----------------~~~~--~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~~~~~~~~~~~~~g 136 (256)
T 2etb_A 78 -----------------LVNA--Q-CTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL-RACGRFFQKHQGTCFYFG 136 (256)
T ss_dssp -----------------GGGC--C-CCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCCSGGGSCCSSSCCCSC
T ss_pred -----------------hccc--c-cccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-ccccccccccccccccCC
Confidence 0000 0 113456788899998888888888888888888765 4444 6
Q ss_pred CCHHHHHHHcCCHHHHHHHHhc--cccccccccccccchhhHhHh--cCchh-------HHHHHHHhccccccc------
Q 007515 215 RTPLHWAAIKGRINIIDEILSL--NLQSAEMRTIHGETVLHLTVK--NNQYE-------AVKYLMETLNITKLA------ 277 (600)
Q Consensus 215 ~tpL~~Aa~~g~~~~v~~Ll~~--~~~~~~~~~~~g~t~Lh~Av~--~~~~~-------iv~~Ll~~~~~~~~~------ 277 (600)
.||||+|+..|+.+++++|++. .+.+++.+|..|+||||+|+. .++.+ ++++|++. +.++
T Consensus 137 ~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~---ga~~~~~~~~ 213 (256)
T 2etb_A 137 ELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQM---GARLCPTVQL 213 (256)
T ss_dssp SSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH---HHHHSTTCCG
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHc---CCCccccccc
Confidence 6666666666666666666662 224455555556666666655 45554 55555554 3333
Q ss_pred -CCCCCCCChHhHHHHhCCcHHHHHHHHhcCCC
Q 007515 278 -NMPDNDGNTILHLATAGKLTTMVIYLLKLGVD 309 (600)
Q Consensus 278 -n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad 309 (600)
+.+|.+|+||||+|+..|+.+++++|+++|++
T Consensus 214 ~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 246 (256)
T 2etb_A 214 EEISNHQGLTPLKLAAKEGKIEIFRHILQREFS 246 (256)
T ss_dssp GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC
Confidence 55555555555555555555555555555544
No 51
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=4.3e-29 Score=228.59 Aligned_cols=158 Identities=32% Similarity=0.457 Sum_probs=121.1
Q ss_pred HHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHH
Q 007515 149 SLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRIN 228 (600)
Q Consensus 149 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~ 228 (600)
+|+.|+..|+.++|+.|++.+.+++ .+|.+|+||||+|+..++.++++.|++.|+++.. +|.+|+||||+|+..|+.+
T Consensus 7 ~L~~Aa~~G~~~~v~~Ll~~Gadvn-~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~-~d~~g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 7 RLIEAAENGNKDRVKDLIENGADVN-ASDSDGRTPLHHAAENGHKEVVKLLISKGADVNA-KDSDGRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhh-hccCCCCHHHHHHHcCCHH
Confidence 6777888888888888888777765 6777888888888888888888888888887755 6778888888888888888
Q ss_pred HHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCC
Q 007515 229 IIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGV 308 (600)
Q Consensus 229 ~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga 308 (600)
+++.|++.+ .+++.+|..|+||||+|+..|+.+++++|++. +.+++.+|.+|+||||+|+..|+.+++++|+++||
T Consensus 85 ~v~~Ll~~g-advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~---gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 160 (169)
T 4gpm_A 85 VVKLLISKG-ADVNAKDSDGRTPLHHAAENGHKEVVKLLISK---GADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160 (169)
T ss_dssp HHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC--
T ss_pred HHHHHHHCc-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 888888776 45677777788888888888888888888776 55677788888888888888888888888888888
Q ss_pred Cccc
Q 007515 309 DVNA 312 (600)
Q Consensus 309 d~n~ 312 (600)
+++.
T Consensus 161 ~ie~ 164 (169)
T 4gpm_A 161 WLEH 164 (169)
T ss_dssp ----
T ss_pred CcCC
Confidence 7754
No 52
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=3.4e-28 Score=222.63 Aligned_cols=157 Identities=27% Similarity=0.357 Sum_probs=111.5
Q ss_pred cHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCH
Q 007515 47 TILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRL 126 (600)
Q Consensus 47 T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~ 126 (600)
+.|+.||+.|+.++|+.|++.+.+ ++.+|..|.||||+|+..++.+++++|++.++++. ..|..|.||||+|+..|+.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gad-vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~-~~d~~g~TpLh~A~~~g~~ 83 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGAD-VNASDSDGRTPLHHAAENGHKEVVKLLISKGADVN-AKDSDGRTPLHHAAENGHK 83 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchh-hhccCCCCHHHHHHHcCCH
Confidence 457788888888888888887776 67778888888888888888888888888777763 3477777888777777777
Q ss_pred HHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCC
Q 007515 127 DVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDL 206 (600)
Q Consensus 127 e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~ 206 (600)
+++++|++++++++..+..|.||||+|+..|+.++++.|++.+.++. .+|.+|+||||+|+..|+.+++++|+++|+++
T Consensus 84 ~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 84 EVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVN-TSDSDGRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred HHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 77777777777766666666666666666666666666666666654 55666666666666666666666666666665
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=3.3e-29 Score=246.65 Aligned_cols=207 Identities=17% Similarity=0.142 Sum_probs=127.5
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHH----hCchhhhccC----CCCCcHhHHHH---HcCCHHHHHHHHhCCccc------
Q 007515 43 GSLNTILHLTARFGHEELASEILK----LCPEMVAAEN----EKMETPLHEAC---REGRLNFVKLFVGIDPSV------ 105 (600)
Q Consensus 43 ~~g~T~Lh~Aa~~g~~e~v~~Ll~----~~~~~l~~~n----~~g~TpLh~Aa---~~g~~~iv~~Ll~~~~~~------ 105 (600)
..+.|+||.||+.|+.+.++.|++ .+.. ++..+ ..|.||||+|+ +.|+.+++++|++.+++.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~-~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 81 (260)
T 3jxi_A 3 VFNRPILFDIVSRGSPDGLEGLLSFLLTHKKR-LTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF 81 (260)
T ss_dssp CCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCC-TTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH
T ss_pred cchHHHHHHHHHhCCHHHHHHHHHHHHhcCCC-cchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh
Confidence 456788888888888885555554 5555 34333 66888888888 668888888888776542
Q ss_pred ----ccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCC
Q 007515 106 ----IYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGH 181 (600)
Q Consensus 106 ----~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~ 181 (600)
....|..|.||||+|+..|+.+++++|++++.+++..+.+.. ..+......+..|+
T Consensus 82 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~--------------------~~~~~~~~~~~~g~ 141 (260)
T 3jxi_A 82 INSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRF--------------------FQPKDEGGYFYFGE 141 (260)
T ss_dssp HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECC--------------------CSSSCCCCSCCSCS
T ss_pred hcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccc--------------------cCcccccccccCCC
Confidence 122344778888888888888888888887777665442110 00000012224566
Q ss_pred hHHHHHHhcCcHHHHHHHHh---cCCCCCCCCCCCCCCHHHHHHHcCC---------HHHHHHHHhcccccc------cc
Q 007515 182 TPLHLSCSKGHLEITRELLK---LDPDLSSLPDNEGRTPLHWAAIKGR---------INIIDEILSLNLQSA------EM 243 (600)
Q Consensus 182 tpLh~A~~~g~~~iv~~Ll~---~~~~~~~~~d~~g~tpL~~Aa~~g~---------~~~v~~Ll~~~~~~~------~~ 243 (600)
||||+|+..|+.+++++|++ .|+++.. +|..|+||||+|+..|+ .++++.|++.+.+.. +.
T Consensus 142 tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~-~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~ 220 (260)
T 3jxi_A 142 LPLSLAACTNQPHIVHYLTENGHKQADLRR-QDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEAL 220 (260)
T ss_dssp SHHHHHHHTTCHHHHHHHHHCSSCCCCTTC-CCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGC
T ss_pred CHHHHHHHcCCHHHHHHHHhccccCCCCcc-cCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhc
Confidence 66666666666666666666 5555543 55666666666666555 466666666553211 44
Q ss_pred ccccccchhhHhHhcCchhHHHHHHHhc
Q 007515 244 RTIHGETVLHLTVKNNQYEAVKYLMETL 271 (600)
Q Consensus 244 ~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~ 271 (600)
.|..|+||||+|++.|+.+++++|++++
T Consensus 221 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 248 (260)
T 3jxi_A 221 LNNDGLSPLMMAAKTGKIGIFQHIIRRE 248 (260)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHhC
Confidence 5566666666666666666666666653
No 54
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=8.8e-29 Score=243.62 Aligned_cols=207 Identities=17% Similarity=0.175 Sum_probs=125.0
Q ss_pred CCCCCcHhHHHHHcCCHHHHHHHHh----CCcccccc---cCCCCCcHHHHHH---HhCCHHHHHHHHhCCcccccccCC
Q 007515 76 NEKMETPLHEACREGRLNFVKLFVG----IDPSVIYK---LNRDNESVLYVAC---ERGRLDVAKQLLNYSSLLILEVDG 145 (600)
Q Consensus 76 n~~g~TpLh~Aa~~g~~~iv~~Ll~----~~~~~~~~---~~~~g~tpL~~A~---~~g~~e~v~~Ll~~~~~~~~~~~~ 145 (600)
|..|+|+||.|++.|+.+.++.|++ .+.++... .+..|.||||+|+ ..|+.+++++|++.+++....
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~--- 78 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNM--- 78 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCH---
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccch---
Confidence 4567778888888888775444443 55555322 2356777777777 567777777777765543210
Q ss_pred CChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCC--------------
Q 007515 146 LTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPD-------------- 211 (600)
Q Consensus 146 ~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d-------------- 211 (600)
..++. ... ...|..|+||||+||..|+.+++++|++.|+++.. .+
T Consensus 79 -----------------~~~~~--~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~~~~~~~~~~~~ 137 (260)
T 3jxi_A 79 -----------------REFIN--SPF-RDVYYRGQTALHIAIERRCKHYVELLVEKGADVHA-QARGRFFQPKDEGGYF 137 (260)
T ss_dssp -----------------HHHHT--CCB-CCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCEECCCSSSCCCCSC
T ss_pred -----------------Hhhhc--ccc-cccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCc-cccccccCcccccccc
Confidence 00111 111 24456789999999999999999999999988765 44
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHhc--cccccccccccccchhhHhHhcCc---------hhHHHHHHHhccccccc---
Q 007515 212 NEGRTPLHWAAIKGRINIIDEILSL--NLQSAEMRTIHGETVLHLTVKNNQ---------YEAVKYLMETLNITKLA--- 277 (600)
Q Consensus 212 ~~g~tpL~~Aa~~g~~~~v~~Ll~~--~~~~~~~~~~~g~t~Lh~Av~~~~---------~~iv~~Ll~~~~~~~~~--- 277 (600)
..|.||||+|+..|+.+++++|++. ...+++.+|..|+||||+|+..++ .+++++|++. +..+
T Consensus 138 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~---ga~~~~~ 214 (260)
T 3jxi_A 138 YFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIK---CAKLFPD 214 (260)
T ss_dssp CSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHH---HHHHCTT
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHh---Ccccccc
Confidence 3566666666666666666666662 224455555556666666665444 4555555554 2222
Q ss_pred ----CCCCCCCChHhHHHHhCCcHHHHHHHHhcCCC
Q 007515 278 ----NMPDNDGNTILHLATAGKLTTMVIYLLKLGVD 309 (600)
Q Consensus 278 ----n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad 309 (600)
+.+|.+|+||||+|+..|+.+++++|+++|++
T Consensus 215 ~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 250 (260)
T 3jxi_A 215 TNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIA 250 (260)
T ss_dssp CCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence 44555555555555555555555555555443
No 55
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=1.8e-30 Score=267.98 Aligned_cols=263 Identities=16% Similarity=0.132 Sum_probs=185.7
Q ss_pred CcHHHHHHH-hCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccc--cccCCCCCcHHHHHHH
Q 007515 46 NTILHLTAR-FGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVI--YKLNRDNESVLYVACE 122 (600)
Q Consensus 46 ~T~Lh~Aa~-~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~--~~~~~~g~tpL~~A~~ 122 (600)
.+++++|+. .++.++++++++.+.+ ++||||+||+.|+.++|++|++.++... ...+..|.||||+|+.
T Consensus 66 ll~~~~a~~~~~~~~~~~~l~~~g~~--------~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~ 137 (376)
T 2aja_A 66 LLCLYYAHYNRNAKQLWSDAHKKGIK--------SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAE 137 (376)
T ss_dssp HHHHHHHHTTTTCTTHHHHHHHHTCC--------HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHcCCC--------cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHH
Confidence 467787776 5778888888877654 4599999999999999999999876221 1235567889999999
Q ss_pred hCCHHHHHHHHhCCcc---cccccCCCChHHHHHHhcCCHHHHHHHHhcCccccc-cCCCCCChHHHHHH-hcCcHHHHH
Q 007515 123 RGRLDVAKQLLNYSSL---LILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAW-KKDLNGHTPLHLSC-SKGHLEITR 197 (600)
Q Consensus 123 ~g~~e~v~~Ll~~~~~---~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~-~~d~~g~tpLh~A~-~~g~~~iv~ 197 (600)
+|+.+++++|++++++ .+....+ .||||.|+..|+.+++++|++.+++... ..|..|.||||+|+ ..|+.++++
T Consensus 138 ~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~ 216 (376)
T 2aja_A 138 NGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVIN 216 (376)
T ss_dssp TTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHH
T ss_pred cCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHH
Confidence 9999999999999964 2222222 7899999999999999999999888652 26777899999999 999999999
Q ss_pred HHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCchhH--------------
Q 007515 198 ELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEA-------------- 263 (600)
Q Consensus 198 ~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~i-------------- 263 (600)
+|++.|+ .|.||||.|+..|+.+++++|++.+.. .+. ..++++.|+.+|+.++
T Consensus 217 ~Ll~~ga--------~~~taL~~Aa~~g~~evv~lL~~~ga~-~~~----~~~~l~~A~~~g~~~vv~~~~~~~~~~~~~ 283 (376)
T 2aja_A 217 FLLDCPV--------MLAYAEIHEFEYGEKYVNPFIARHVNR-LKE----MHDAFKLSNPDGVFDLVTKSECLQGFYMLR 283 (376)
T ss_dssp HHTTSHH--------HHHHHHHCTTTTTTTTHHHHHHHHHHH-HHH----HHTTTTTTSSSSCCCCSSHHHHHHHHHHHH
T ss_pred HHHhCCC--------ccchHHHHHHHCCCHHHHHHHHhcCcc-ccc----ccHHHHHHHHCCChhhhcHHhhhhhHHHHH
Confidence 9998663 278999999999999999999987642 222 2346777777766552
Q ss_pred -------------HHHHHHhcccccc--cCCCCCCCChHhHHHHhCCcHHHHHHHHhcCCCcccccCCCCCHHHHHhhhc
Q 007515 264 -------------VKYLMETLNITKL--ANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDA 328 (600)
Q Consensus 264 -------------v~~Ll~~~~~~~~--~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad~n~~n~~G~T~l~~a~~~a 328 (600)
+++|++....... ....++.++||||+|+..|+.+++++|++.| ..++..|+|++++++
T Consensus 284 ~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~---~v~~~~~~~~~~~~~--- 357 (376)
T 2aja_A 284 NLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIP---SVLALTKANNYYINE--- 357 (376)
T ss_dssp HHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSH---HHHHSCC-----------
T ss_pred HHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcCh---HHHHHHHHhcccccc---
Confidence 2333322111111 1234457889999999999999999999864 778899999999843
Q ss_pred CCcchhhHH
Q 007515 329 SNSGALQIV 337 (600)
Q Consensus 329 ~~~~~~~i~ 337 (600)
..+..++.
T Consensus 358 -~~~~~~~~ 365 (376)
T 2aja_A 358 -TGGRLDLR 365 (376)
T ss_dssp ---------
T ss_pred -ccccccHH
Confidence 34444444
No 56
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=9.2e-28 Score=220.75 Aligned_cols=170 Identities=24% Similarity=0.241 Sum_probs=144.3
Q ss_pred CChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcC
Q 007515 146 LTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKG 225 (600)
Q Consensus 146 ~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g 225 (600)
+.+|||.|+..|+.++++.|++.++...+..|..|+||||+|+..|+.+++++|++.|+++.. .+..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHI-LAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchh-hcccCCCHHHHHHHCC
Confidence 346899999999999999999888886668888999999999999999999999999988765 7888999999999999
Q ss_pred CHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHh
Q 007515 226 RINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLK 305 (600)
Q Consensus 226 ~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~ 305 (600)
+.+++++|++.+ ..++.+|..|+||||+|+..++.+++++|++. +.+++.+|.+|+||||+|+..++.+++++|++
T Consensus 81 ~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (172)
T 3v30_A 81 YTDIVGLLLERD-VDINIYDWNGGTPLLYAVRGNHVKCVEALLAR---GADLTTEADSGYTPMDLAVALGYRKVQQVIEN 156 (172)
T ss_dssp CHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCccccCCCCCCHHHHHHHhCcHHHHHHHHH
Confidence 999999999876 46777888899999999999999999999987 56788899999999999999999999999999
Q ss_pred cCCCcccccCCCCCH
Q 007515 306 LGVDVNAINRKGYTA 320 (600)
Q Consensus 306 ~gad~n~~n~~G~T~ 320 (600)
+|+++...|..|.||
T Consensus 157 ~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 157 HILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHSCC-------
T ss_pred HHHHHhcccCCCCCC
Confidence 999999999888887
No 57
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=1.3e-27 Score=237.60 Aligned_cols=195 Identities=19% Similarity=0.233 Sum_probs=107.9
Q ss_pred CcHHHHHHHhCCHHHHHHHHHhCch-hhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhC
Q 007515 46 NTILHLTARFGHEELASEILKLCPE-MVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERG 124 (600)
Q Consensus 46 ~T~Lh~Aa~~g~~e~v~~Ll~~~~~-~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g 124 (600)
.+++|.|+..|+.+.++.+++...+ .++.+|..|.||||+|+..|+.+++++|++.++......+..|.|||++|+...
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~ 156 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALAT 156 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCC
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHH
Confidence 3445555555555555555544332 244555555555555555555555555555555333444555555555555110
Q ss_pred CHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCC
Q 007515 125 RLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDP 204 (600)
Q Consensus 125 ~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~ 204 (600)
. ...++.++++.|++.+.... ..|..|+||||+|+..|+.+++++|++.|+
T Consensus 157 ~----------------------------~~~~~~~~v~~Ll~~g~~~~-~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga 207 (276)
T 4hbd_A 157 L----------------------------KTQDDIETVLQLFRLGNINA-KASQAGQTALMLAVSHGRVDVVKALLACEA 207 (276)
T ss_dssp C----------------------------CSHHHHHHHHHHHHHSCTTC-CCTTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred h----------------------------hhhhhHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence 0 03344455555555553333 445556666666666666666666666666
Q ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHh
Q 007515 205 DLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMET 270 (600)
Q Consensus 205 ~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~ 270 (600)
+++. +|.+|+||||+|+..|+.++++.|++..+.+++.+|..|+||||+|+.+|+.+++++|+++
T Consensus 208 d~n~-~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 272 (276)
T 4hbd_A 208 DVNV-QDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSR 272 (276)
T ss_dssp CTTC-CCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCCC-CCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 6543 5566666666666666666666666633345555666666666666666666666666655
No 58
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.94 E-value=7.6e-27 Score=214.59 Aligned_cols=168 Identities=24% Similarity=0.262 Sum_probs=100.6
Q ss_pred CcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCC
Q 007515 46 NTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGR 125 (600)
Q Consensus 46 ~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~ 125 (600)
.||||.||..|+.+++++|++.++..++.+|..|.||||+|+..|+.+++++|++.++++. ..+..|.||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH-ILAKERESALSLASTGGY 81 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTCCCHHHHHHHTTC
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCch-hhcccCCCHHHHHHHCCC
Confidence 4667777777777777777776666666666677777777777777777777776665553 335566666666666666
Q ss_pred HHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCC
Q 007515 126 LDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPD 205 (600)
Q Consensus 126 ~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~ 205 (600)
.+++++|++++.+++ ..|..|+||||+|+..|+.+++++|++.|++
T Consensus 82 ~~~v~~Ll~~g~~~~----------------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 127 (172)
T 3v30_A 82 TDIVGLLLERDVDIN----------------------------------IYDWNGGTPLLYAVRGNHVKCVEALLARGAD 127 (172)
T ss_dssp HHHHHHHHTTTCCTT----------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCCC----------------------------------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 666666666555443 3455566666666666666666666666665
Q ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccc
Q 007515 206 LSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGET 250 (600)
Q Consensus 206 ~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t 250 (600)
+.. .|..|.||||+|+..|+.++++.|++.+. .....+..|.|
T Consensus 128 ~~~-~~~~g~t~l~~A~~~~~~~~~~~L~~~~~-~~~~~~~~~~~ 170 (172)
T 3v30_A 128 LTT-EADSGYTPMDLAVALGYRKVQQVIENHIL-KLFQSNLVPAD 170 (172)
T ss_dssp TTC-CCTTSCCHHHHHHHHTCHHHHHHHHHHHH-HHSCC------
T ss_pred ccc-cCCCCCCHHHHHHHhCcHHHHHHHHHHHH-HHhcccCCCCC
Confidence 543 55566666666666666666666666553 23333344443
No 59
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=5e-27 Score=233.33 Aligned_cols=188 Identities=19% Similarity=0.233 Sum_probs=148.1
Q ss_pred HHHHHHHhCCHHHHHHHHhCCcc--cccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHH-----
Q 007515 116 VLYVACERGRLDVAKQLLNYSSL--LILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSC----- 188 (600)
Q Consensus 116 pL~~A~~~g~~e~v~~Ll~~~~~--~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~----- 188 (600)
++|.|+..|+.+.++.+++.+.+ ++..+..|.||||+|+..|+.++++.|++.++...+..|..|.||||+|+
T Consensus 79 ~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~ 158 (276)
T 4hbd_A 79 DAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLK 158 (276)
T ss_dssp TCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhh
Confidence 34444444555554444443332 33344455556666666666666666666665333477888999999999
Q ss_pred hcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHH
Q 007515 189 SKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLM 268 (600)
Q Consensus 189 ~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll 268 (600)
..++.++++.|++.|.+... .+..|.||||+|+..|+.++++.|++.+ .+++.+|..|+||||+|+..|+.+++++|+
T Consensus 159 ~~~~~~~v~~Ll~~g~~~~~-~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-ad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll 236 (276)
T 4hbd_A 159 TQDDIETVLQLFRLGNINAK-ASQAGQTALMLAVSHGRVDVVKALLACE-ADVNVQDDDGSTALMCACEHGHKEIAGLLL 236 (276)
T ss_dssp SHHHHHHHHHHHHHSCTTCC-CTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHhCC-CCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 66889999999999977654 7888999999999999999999999987 578889999999999999999999999999
Q ss_pred HhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcC
Q 007515 269 ETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLG 307 (600)
Q Consensus 269 ~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~g 307 (600)
+. .+.+++.+|.+|+||||+|+..|+.+++++|++++
T Consensus 237 ~~--~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 237 AV--PSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp TS--TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred hc--CCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 82 16678999999999999999999999999999653
No 60
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.94 E-value=2e-26 Score=215.91 Aligned_cols=161 Identities=22% Similarity=0.256 Sum_probs=99.5
Q ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHH
Q 007515 40 TVPGSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYV 119 (600)
Q Consensus 40 ~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~ 119 (600)
..+..|.||||+|+..|+.+++++|++.+.+ ++..|..|.||||+|+..|+.+++++|++.++++. ..+..|.||||+
T Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~ 107 (192)
T 2rfm_A 30 YRDSYNRTPLMVACMLGMENAIDKLVENFDK-LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVN-TKDFSGKTPLMW 107 (192)
T ss_dssp CCCTTCCCHHHHHHHHTCGGGHHHHHHHHCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTSCCHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHhccc-cccccccCccHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCcHHHH
Confidence 3455566666666666666666666666554 55556666666666666666666666666655542 235555555555
Q ss_pred HHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHH
Q 007515 120 ACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITREL 199 (600)
Q Consensus 120 A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 199 (600)
|+..|+.+++++|++++.+++ ..|..|.||||+|+..|+.+++++|
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~~----------------------------------~~~~~g~t~L~~A~~~~~~~~v~~L 153 (192)
T 2rfm_A 108 SIIFGYSEMSYFLLEHGANVN----------------------------------DRNLEGETPLIVASKYGRSEIVKKL 153 (192)
T ss_dssp HHHHTCHHHHHHHHHTTCCSS----------------------------------CCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCC----------------------------------CCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 555555555555555544433 4555666667776666666777777
Q ss_pred HhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcc
Q 007515 200 LKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLN 237 (600)
Q Consensus 200 l~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~ 237 (600)
+++|+++.. .|..|.||||+|+..|+.+++++|++.+
T Consensus 154 l~~ga~~~~-~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 154 LELGADISA-RDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHTTCCTTC-BCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHCCCCCCC-cCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 766666543 5666677777777777777777666543
No 61
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=2.2e-26 Score=209.17 Aligned_cols=158 Identities=21% Similarity=0.190 Sum_probs=103.3
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHh
Q 007515 44 SLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACER 123 (600)
Q Consensus 44 ~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~ 123 (600)
...|+||.|+..|+.+++++|++.+.+ ++..|..|.||||+|+. |+.+++++|++.++++. ..+..|.||||+|+..
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~ 80 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVN-VNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPD-LKDRTGFAVIHDAARA 80 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCC-TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCC-ccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHc
Confidence 346777777777777777777777666 56777777777777777 77777777777776653 3466777777777777
Q ss_pred CCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcC
Q 007515 124 GRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLD 203 (600)
Q Consensus 124 g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~ 203 (600)
|+.+++++|++++.+++..+..|.||||.|+..|+.+++++|++.+++.....|..|.||||+|+..|+.+++++|+++|
T Consensus 81 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 160 (162)
T 1ihb_A 81 GFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 160 (162)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Confidence 77777777777766665555555555555555555555555555555543355555555555555555555555555555
Q ss_pred C
Q 007515 204 P 204 (600)
Q Consensus 204 ~ 204 (600)
+
T Consensus 161 A 161 (162)
T 1ihb_A 161 A 161 (162)
T ss_dssp -
T ss_pred C
Confidence 4
No 62
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.94 E-value=2.8e-26 Score=214.84 Aligned_cols=163 Identities=26% Similarity=0.313 Sum_probs=126.5
Q ss_pred hhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHH
Q 007515 72 VAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLH 151 (600)
Q Consensus 72 l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh 151 (600)
++.+|..|.||||+|+..|+.+++++|++.++++. ..+..|.||||+|+..|+.++++
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~--------------------- 85 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLE-DKDIEGSTALIWAVKNNRLGIAE--------------------- 85 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTT-CCCTTSCCHHHHHHHTTCHHHHH---------------------
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccc-cccccCccHHHHHHHcCCHHHHH---------------------
Confidence 45566666666666666666666666666555442 23445555555555555555444
Q ss_pred HHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Q 007515 152 VSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIID 231 (600)
Q Consensus 152 ~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~ 231 (600)
+|++.+.++. ..|..|.||||+|+..|+.+++++|++.|+++.. .|..|.||||+|+..|+.++++
T Consensus 86 ------------~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~ 151 (192)
T 2rfm_A 86 ------------KLLSKGSNVN-TKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVND-RNLEGETPLIVASKYGRSEIVK 151 (192)
T ss_dssp ------------HHHHHTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-CCTTCCCHHHHHHHHTCHHHHH
T ss_pred ------------HHHHCCCCCC-CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHH
Confidence 4454444443 5677899999999999999999999999999865 7899999999999999999999
Q ss_pred HHHhccccccccccccccchhhHhHhcCchhHHHHHHHhc
Q 007515 232 EILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETL 271 (600)
Q Consensus 232 ~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~ 271 (600)
+|++.+ .+++.+|..|.||||+|+..++.+++++|++..
T Consensus 152 ~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 152 KLLELG-ADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHCC-CCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 999986 567888999999999999999999999999863
No 63
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.94 E-value=6.1e-29 Score=256.46 Aligned_cols=241 Identities=14% Similarity=0.096 Sum_probs=167.4
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHhCchh--hhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccc--cccCCCCCcHHH
Q 007515 43 GSLNTILHLTARFGHEELASEILKLCPEM--VAAENEKMETPLHEACREGRLNFVKLFVGIDPSVI--YKLNRDNESVLY 118 (600)
Q Consensus 43 ~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~--l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~--~~~~~~g~tpL~ 118 (600)
.+++||||+||+.|+.++|++|++.+... ....|..|.||||+||..|+.++|++|++.+++.. .. +..+.||||
T Consensus 90 ~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i-~~~~~TpLh 168 (376)
T 2aja_A 90 IKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMI-QAENYHAFR 168 (376)
T ss_dssp CCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHH-SHHHHHHHH
T ss_pred CCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccc-CCCCCCHHH
Confidence 34579999999999999999999987621 22345678899999999999999999999996421 11 112299999
Q ss_pred HHHHhCCHHHHHHHHhCCccccc--ccCCCChHHHHHH-hcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHH
Q 007515 119 VACERGRLDVAKQLLNYSSLLIL--EVDGLTTSLHVSA-MAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEI 195 (600)
Q Consensus 119 ~A~~~g~~e~v~~Ll~~~~~~~~--~~~~~~t~Lh~A~-~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~i 195 (600)
+|+..|+.+++++|++++++++. .+..|.||||.|+ ..|+.+++++|++.+. .|.||||+|+..|+.++
T Consensus 169 ~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga--------~~~taL~~Aa~~g~~ev 240 (376)
T 2aja_A 169 LAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV--------MLAYAEIHEFEYGEKYV 240 (376)
T ss_dssp HHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH--------HHHHHHHCTTTTTTTTH
T ss_pred HHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC--------ccchHHHHHHHCCCHHH
Confidence 99999999999999999998765 6666789999999 9999999999998553 27899999999999999
Q ss_pred HHHHHhcCCCCCCCCCCCCCCHHHHHHHcC---------------------------CHHHHHHHHhccccc----cccc
Q 007515 196 TRELLKLDPDLSSLPDNEGRTPLHWAAIKG---------------------------RINIIDEILSLNLQS----AEMR 244 (600)
Q Consensus 196 v~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g---------------------------~~~~v~~Ll~~~~~~----~~~~ 244 (600)
+++|++.+++... . .++++.|+.+| ..+.+++|++..... ....
T Consensus 241 v~lL~~~ga~~~~-~----~~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~ 315 (376)
T 2aja_A 241 NPFIARHVNRLKE-M----HDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATI 315 (376)
T ss_dssp HHHHHHHHHHHHH-H----HTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSS
T ss_pred HHHHHhcCccccc-c----cHHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCC
Confidence 9999998765421 1 11233333333 344555555432110 1122
Q ss_pred cccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHH
Q 007515 245 TIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYL 303 (600)
Q Consensus 245 ~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~L 303 (600)
...+.|+||+|+..|+.+++++|++.+ ..+|..|+|++.+|-..|..++++.-
T Consensus 316 ~n~~~~~L~~A~~~g~~e~v~lLl~~~------~v~~~~~~~~~~~~~~~~~~~~~~~~ 368 (376)
T 2aja_A 316 PGDANELLRLALRLGNQGACALLLSIP------SVLALTKANNYYINETGGRLDLRAVA 368 (376)
T ss_dssp TTCCCHHHHHHHHHTCTTHHHHHTTSH------HHHHSCC-------------------
T ss_pred CCCccHHHHHHHHcCcHHHHHHHHcCh------HHHHHHHHhccccccccccccHHHHH
Confidence 345678999999999999999999863 44678899999999999988877653
No 64
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=4.1e-26 Score=207.34 Aligned_cols=157 Identities=22% Similarity=0.303 Sum_probs=114.2
Q ss_pred ChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCC
Q 007515 147 TTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGR 226 (600)
Q Consensus 147 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~ 226 (600)
.+|||.|+..|+.++++.|++.+.++. ..|..|+||||+|+. |+.+++++|++.|+++.. .+..|.||||+|+..|+
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 6 GNELASAAARGDLEQLTSLLQNNVNVN-AQNGFGRTALQVMKL-GNPEIARRLLLRGANPDL-KDRTGFAVIHDAARAGF 82 (162)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTSCCCTT-CCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTC
T ss_pred hhHHHHHHHcCCHHHHHHHHhCCCCcc-ccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCC
Confidence 457777777777777777777666654 566777777777777 777777777777777654 67777777777777777
Q ss_pred HHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhc
Q 007515 227 INIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKL 306 (600)
Q Consensus 227 ~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ 306 (600)
.++++.|++.+ ..++.+|..|+||||+|+..++.+++++|++.... .++.+|..|+||||+|+..++.+++++|+++
T Consensus 83 ~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 159 (162)
T 1ihb_A 83 LDTLQTLLEFQ-ADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS--NVGHRNHKGDTACDLARLYGRNEVVSLMQAN 159 (162)
T ss_dssp HHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC--CCCCcCCCCCcHHHHHHHcCCHHHHHHHHHh
Confidence 77777777765 45666677777777777777777777777776321 2577778888888888888888888888888
Q ss_pred CCC
Q 007515 307 GVD 309 (600)
Q Consensus 307 gad 309 (600)
|||
T Consensus 160 GAd 162 (162)
T 1ihb_A 160 GAG 162 (162)
T ss_dssp C--
T ss_pred CCC
Confidence 775
No 65
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=4e-26 Score=208.65 Aligned_cols=162 Identities=23% Similarity=0.324 Sum_probs=120.6
Q ss_pred CCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhc
Q 007515 179 NGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKN 258 (600)
Q Consensus 179 ~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~ 258 (600)
.|.||||.|+..|+.++++.|++.++++.. .|..|.||||+|+..|+.+++++|++.+ ..++..+..|.||||+|+..
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~ 79 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINH-TDEEGFTPLMWAAAHGQIAVVEFLLQNG-ADPQLLGKGRESALSLACSK 79 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCC-CCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHc
Confidence 466777777777777777777777766544 5667777777777777777777777765 45566667777777777777
Q ss_pred CchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCCCcccccCCCCCHHHHHhhhcCCcchhhHHH
Q 007515 259 NQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVP 338 (600)
Q Consensus 259 ~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad~n~~n~~G~T~l~~a~~~a~~~~~~~i~~ 338 (600)
++.+++++|++. +..++.+|.+|+||||+|+..++.+++++|+++|++++.+|..|.||+++|.. .++.++++
T Consensus 80 ~~~~~v~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~----~~~~~~~~ 152 (167)
T 3v31_A 80 GYTDIVKMLLDC---GVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVA----LGYRSVQQ 152 (167)
T ss_dssp TCHHHHHHHHHH---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH----HTCHHHHH
T ss_pred CCHHHHHHHHHC---CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH----cCcHHHHH
Confidence 777777777776 45677788888888888888888888888888888888888888888888543 45677888
Q ss_pred HHHHhcccccC
Q 007515 339 ALEEAGARRCD 349 (600)
Q Consensus 339 ~L~~~ga~~~~ 349 (600)
+|++++++...
T Consensus 153 ~L~~~~~~~~~ 163 (167)
T 3v31_A 153 VIESHLLKLLQ 163 (167)
T ss_dssp HHHHHHHHHCS
T ss_pred HHHHHHHHHHH
Confidence 88887766543
No 66
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=4.6e-26 Score=208.24 Aligned_cols=158 Identities=23% Similarity=0.281 Sum_probs=107.9
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHh
Q 007515 44 SLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACER 123 (600)
Q Consensus 44 ~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~ 123 (600)
.|.||||.||..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++.++++. ..+..|.||||+|+..
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~ 79 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV-INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQ-LLGKGRESALSLACSK 79 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHHc
Confidence 466777777777777777777777655 66677777777777777777777777777766553 2355666666666666
Q ss_pred CCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcC
Q 007515 124 GRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLD 203 (600)
Q Consensus 124 g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~ 203 (600)
|+.+++++|++++.+ +. ..|..|.||||+|+..|+.+++++|+++|
T Consensus 80 ~~~~~v~~Ll~~g~~---------------------------------~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 125 (167)
T 3v31_A 80 GYTDIVKMLLDCGVD---------------------------------VN-EYDWNGGTPLLYAVHGNHVKCVKMLLESG 125 (167)
T ss_dssp TCHHHHHHHHHHTCC---------------------------------TT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHCCCC---------------------------------CC-cCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 666666665555444 33 45666777777777777777777777777
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccc
Q 007515 204 PDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNL 238 (600)
Q Consensus 204 ~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~ 238 (600)
+++.. .|..|.||||+|+..|+.+++++|++++.
T Consensus 126 ~~~~~-~~~~g~t~l~~A~~~~~~~~~~~L~~~~~ 159 (167)
T 3v31_A 126 ADPTI-ETDSGYNSMDLAVALGYRSVQQVIESHLL 159 (167)
T ss_dssp CCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCCCC-cCCCCCCHHHHHHHcCcHHHHHHHHHHHH
Confidence 77644 66777777777777777777777776653
No 67
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=5.2e-26 Score=207.49 Aligned_cols=161 Identities=25% Similarity=0.311 Sum_probs=132.2
Q ss_pred CCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHh
Q 007515 176 KDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLT 255 (600)
Q Consensus 176 ~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A 255 (600)
.|.+|.||||.|+..|+.++++.|++.+.......+..|.||||+|+..|+.+++++|++.+ ..++.+|..|+||||+|
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A 82 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG-ADVHAKDKGGLVPLHNA 82 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcC-CCCCccCCCCCCHHHHH
Confidence 35667888888888888888888888665444556777888888888888888888888876 45677788888888888
Q ss_pred HhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCCCcccccCCCCCHHHHHhhhcCCcchhh
Q 007515 256 VKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQ 335 (600)
Q Consensus 256 v~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad~n~~n~~G~T~l~~a~~~a~~~~~~~ 335 (600)
+..++.+++++|++. +..+|.+|..|+||||+|+..++.+++++|+++|++++.+|..|.||+++| .. ++.+
T Consensus 83 ~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a----~~-~~~~ 154 (165)
T 3twr_A 83 CSYGHYEVAELLVKH---GAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLV----KD-GDTD 154 (165)
T ss_dssp HHTTCHHHHHHHHHT---TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGS----CT-TCHH
T ss_pred HHcCcHHHHHHHHhC---CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhH----hc-CChH
Confidence 888888888888886 567888999999999999999999999999999999999999999999984 33 5678
Q ss_pred HHHHHHHhcc
Q 007515 336 IVPALEEAGA 345 (600)
Q Consensus 336 i~~~L~~~ga 345 (600)
++++|++.||
T Consensus 155 i~~~L~~~gA 164 (165)
T 3twr_A 155 IQDLLRGDAA 164 (165)
T ss_dssp HHHHHHTC--
T ss_pred HHHHHhhccc
Confidence 9999998876
No 68
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.93 E-value=1.4e-25 Score=205.55 Aligned_cols=158 Identities=28% Similarity=0.400 Sum_probs=106.7
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHH
Q 007515 42 PGSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVAC 121 (600)
Q Consensus 42 ~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~ 121 (600)
...+.|+||.||+.|+.++|++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++.+.++. ..+..|.||||+|+
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~ 88 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGAD-VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVN-AVDHAGMTPLRLAA 88 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHH
Confidence 34567888888888888888888888776 67778888888888888888888888888877663 34667777777777
Q ss_pred HhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHh
Q 007515 122 ERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLK 201 (600)
Q Consensus 122 ~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~ 201 (600)
..|+.+++++|++++.+++.. |..|.||||+|+..|+.+++++|++
T Consensus 89 ~~~~~~~~~~Ll~~g~~~~~~----------------------------------~~~g~t~L~~A~~~~~~~~v~~Ll~ 134 (169)
T 2y1l_E 89 LFGHLEIVEVLLKNGADVNAN----------------------------------DMEGHTPLHLAAMFGHLEIVEVLLK 134 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTCC----------------------------------CTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCC----------------------------------CCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 777777777777766655433 4445555555555555555555555
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Q 007515 202 LDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 236 (600)
Q Consensus 202 ~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~ 236 (600)
+|+++.. .|..|.||||+|+..|+.+++++|++.
T Consensus 135 ~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 135 NGADVNA-QDKFGKTAFDISIDNGNEDLAEILQKL 168 (169)
T ss_dssp TTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred cCCCCCC-cCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 5555433 455555555555555555555555543
No 69
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.93 E-value=7.8e-26 Score=209.37 Aligned_cols=161 Identities=20% Similarity=0.252 Sum_probs=95.7
Q ss_pred CChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcC
Q 007515 180 GHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNN 259 (600)
Q Consensus 180 g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~ 259 (600)
+.+|||.||..|+.++++.|++.+.......|..|.||||+|+..|+.+++++|++.+ ..++..|..|+||||+|+..+
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 83 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRG-ARINVMNRGDDTPLHLAASHG 83 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcC
Confidence 4455555555555555555555543333335555555555555555555555555554 344445555556666666666
Q ss_pred chhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCCCcccccCCCCCHHHHHhhhcCCcchhhHHHH
Q 007515 260 QYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPA 339 (600)
Q Consensus 260 ~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad~n~~n~~G~T~l~~a~~~a~~~~~~~i~~~ 339 (600)
+.+++++|++. +.++|.+|.+|+||||+|+..++.+++++|+++|++++.+|..|.||+++| ...+..+++++
T Consensus 84 ~~~~v~~Ll~~---g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A----~~~~~~~~~~~ 156 (179)
T 3f6q_A 84 HRDIVQKLLQY---KADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKA----KAPLRELLRER 156 (179)
T ss_dssp CHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGS----CHHHHHHHHHH
T ss_pred CHHHHHHHHHc---CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHH----HHHHHHHHHHH
Confidence 66666666554 445666666777777777777777777777777777777777777777763 33455666777
Q ss_pred HHHhccccc
Q 007515 340 LEEAGARRC 348 (600)
Q Consensus 340 L~~~ga~~~ 348 (600)
|++.|++..
T Consensus 157 L~~~g~~~~ 165 (179)
T 3f6q_A 157 AEKMGQNLN 165 (179)
T ss_dssp HHHTTCCCS
T ss_pred HHHhhcCcc
Confidence 777776654
No 70
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.93 E-value=3.3e-25 Score=203.11 Aligned_cols=153 Identities=31% Similarity=0.442 Sum_probs=70.9
Q ss_pred hHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCH
Q 007515 148 TSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRI 227 (600)
Q Consensus 148 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~ 227 (600)
++|+.|+..|+.+++++|++.+.+++ ..|..|.||||+|+..|+.+++++|++.|+++.. .|..|.||||+|+..|+.
T Consensus 16 ~~l~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~ 93 (169)
T 2y1l_E 16 KKLLEAARAGRDDEVRILMANGADVN-AEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNA-VDHAGMTPLRLAALFGHL 93 (169)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCH
T ss_pred chHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCH
Confidence 34444444444444444444444433 3444455555555555555555555555444432 344445555555555555
Q ss_pred HHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhc
Q 007515 228 NIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKL 306 (600)
Q Consensus 228 ~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ 306 (600)
+++++|++.+ ...+..|..|+||||+|+..++.+++++|++. +.+++.+|..|.||||+|+..++.+++++|++.
T Consensus 94 ~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 94 EIVEVLLKNG-ADVNANDMEGHTPLHLAAMFGHLEIVEVLLKN---GADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168 (169)
T ss_dssp HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred HHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 5555554443 23333344444444444444444444444443 233444444444444444444444444444443
No 71
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.93 E-value=2.1e-25 Score=206.48 Aligned_cols=167 Identities=21% Similarity=0.293 Sum_probs=154.5
Q ss_pred CChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcC
Q 007515 146 LTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKG 225 (600)
Q Consensus 146 ~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g 225 (600)
+.++||.|+..|+.++++.|++.++...+..|..|+||||+|+..|+.+++++|++.|+++.. .|..|.||||+|+..|
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~ 83 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINV-MNRGDDTPLHLAASHG 83 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcC
Confidence 456999999999999999999997776668899999999999999999999999999999866 7899999999999999
Q ss_pred CHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHh
Q 007515 226 RINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLK 305 (600)
Q Consensus 226 ~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~ 305 (600)
+.+++++|++.+ ..++..|..|.||||+|+..++.+++++|++. +.+++.+|.+|.||||+|+..++.+++++|++
T Consensus 84 ~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~ 159 (179)
T 3f6q_A 84 HRDIVQKLLQYK-ADINAVNEHGNVPLHYACFWGQDQVAEDLVAN---GALVSICNKYGEMPVDKAKAPLRELLRERAEK 159 (179)
T ss_dssp CHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCcchhccCCCCcHHHHHHHHHHHHHHHHHH
Confidence 999999999987 57788899999999999999999999999997 66789999999999999999999999999999
Q ss_pred cCCCcccccCCC
Q 007515 306 LGVDVNAINRKG 317 (600)
Q Consensus 306 ~gad~n~~n~~G 317 (600)
.|++++..+.++
T Consensus 160 ~g~~~~~~~~~~ 171 (179)
T 3f6q_A 160 MGQNLNRIPYKD 171 (179)
T ss_dssp TTCCCSCBCCCC
T ss_pred hhcCcccCCccc
Confidence 999999887654
No 72
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=7.1e-28 Score=232.40 Aligned_cols=196 Identities=18% Similarity=0.165 Sum_probs=126.5
Q ss_pred HHHHhCCcccccc---cCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCC
Q 007515 130 KQLLNYSSLLILE---VDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDL 206 (600)
Q Consensus 130 ~~Ll~~~~~~~~~---~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~ 206 (600)
+.|++++.+++.. ...+.||||.|+..|+.++++.|++.+.+++ ..|..|+||||+||..|+.+++++|++.|+++
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPS-QPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 3445544443322 2223456677777777777777777666654 56777777777777777777777777777776
Q ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccc-ccccchhhHh--HhcCchhHHHHHHHhcccccccCCCCCC
Q 007515 207 SSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRT-IHGETVLHLT--VKNNQYEAVKYLMETLNITKLANMPDND 283 (600)
Q Consensus 207 ~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~-~~g~t~Lh~A--v~~~~~~iv~~Ll~~~~~~~~~n~~d~~ 283 (600)
.. .|..|+||||+|+..|+.+++++|++.+. +++..+ ..|+||||+| +..++.+++++|++. +.+++.+|..
T Consensus 81 n~-~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga-~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~---ga~~~~~~~~ 155 (229)
T 2vge_A 81 NS-PDSHGWTPLHCAASCNDTVICMALVQHGA-AIFATTLSDGATAFEKCDPYREGYADCATYLADV---EQSMGLMNSG 155 (229)
T ss_dssp TC-CCTTCCCHHHHHHHTTCHHHHHHHHTTTC-CTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHH---HHHTTTSGGG
T ss_pred CC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CcccccCCCCCCHHHHHHHHhcChHHHHHHHHHc---CCCcccccCC
Confidence 54 66777777777777777777777777664 344443 5777777777 777777777777776 5567777777
Q ss_pred CChHhHHHHhCCcHHHHHHHHhcCCC--cccccCCCCCHHHHHhhhcCCcchhhHHH
Q 007515 284 GNTILHLATAGKLTTMVIYLLKLGVD--VNAINRKGYTALDVVESDASNSGALQIVP 338 (600)
Q Consensus 284 G~T~Lh~A~~~~~~~iv~~Ll~~gad--~n~~n~~G~T~l~~a~~~a~~~~~~~i~~ 338 (600)
|.||+|.++.... .++|++.|++ ++.+|..|.|||++| ...++.++++
T Consensus 156 ~~~~l~~~~~~~~---~~~ll~~ga~~~~~~~d~~G~TpL~~A----~~~g~~~~v~ 205 (229)
T 2vge_A 156 AVYALWDYSAEFG---DELSFREGESVTVLRRDGPEETDWWWA----ALHGQEGYVP 205 (229)
T ss_dssp EEEESSCBCCSST---TBCCBCTTCEEEEEESSCTTCSSEEEE----EETTEEEEEE
T ss_pred chHHHHHHhhccc---cccCccccccccccccCCCcccHHHHH----HHcCCcceee
Confidence 7777775544432 2466677777 667777788888874 3344555443
No 73
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=1.4e-25 Score=204.66 Aligned_cols=159 Identities=24% Similarity=0.266 Sum_probs=89.2
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHH
Q 007515 42 PGSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVAC 121 (600)
Q Consensus 42 ~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~ 121 (600)
+..|+|+||.|++.|+.+++++|++.++......+..|.||||+|+..|+.+++++|++.++++. ..+..|.||||+|+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH-AKDKGGLVPLHNAC 83 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCC-ccCCCCCCHHHHHH
Confidence 34456667777777777777776665555455666666677777776666666666666666553 33556666666666
Q ss_pred HhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHh
Q 007515 122 ERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLK 201 (600)
Q Consensus 122 ~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~ 201 (600)
..|+.+++++|++++.+++..+..+.||||+|+..|+.+++++|++.+.++. .+|..|.||||+|+. ++.+++++|++
T Consensus 84 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~a~~-~~~~i~~~L~~ 161 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPT-KKNRDGNTPLDLVKD-GDTDIQDLLRG 161 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCTGGGSCT-TCHHHHHHHHT
T ss_pred HcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCChhHhHhc-CChHHHHHHhh
Confidence 6666666666666655554444444444444444444444444444444433 344444444444333 44444444444
Q ss_pred cC
Q 007515 202 LD 203 (600)
Q Consensus 202 ~~ 203 (600)
.|
T Consensus 162 ~g 163 (165)
T 3twr_A 162 DA 163 (165)
T ss_dssp C-
T ss_pred cc
Confidence 43
No 74
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=5.7e-25 Score=197.95 Aligned_cols=150 Identities=18% Similarity=0.240 Sum_probs=91.1
Q ss_pred CcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCC
Q 007515 46 NTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGR 125 (600)
Q Consensus 46 ~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~ 125 (600)
.|+||.|++.|+.+++++|++.+++. . .+..|.||||+|+..|+.+++++|++.++++. ..+..|.||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPF-T-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD-ARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCC-C-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT-CCCTTCCCHHHHHHHHTC
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCC-C-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCh
Confidence 45666666666666666666666542 2 45566666666666666666666666655542 235555566655555555
Q ss_pred HHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCC
Q 007515 126 LDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPD 205 (600)
Q Consensus 126 ~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~ 205 (600)
.+++++|++++.+++ ..|..|+||||+|+..|+.+++++|+++|++
T Consensus 80 ~~~v~~Ll~~g~~~~----------------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 125 (153)
T 1awc_B 80 ANIVEVLLKHGADVN----------------------------------AKDMLKMTALHWATEHNHQEVVELLIKYGAD 125 (153)
T ss_dssp HHHHHHHHTTTCCTT----------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCCC----------------------------------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 555555555544433 4455666666666666666666666666666
Q ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHH
Q 007515 206 LSSLPDNEGRTPLHWAAIKGRINIIDEI 233 (600)
Q Consensus 206 ~~~~~d~~g~tpL~~Aa~~g~~~~v~~L 233 (600)
+.. +|..|.||||+|+..|+.+++++|
T Consensus 126 ~~~-~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 126 VHT-QSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TTC-CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ccc-cCCCCCCHHHHHHHcCCHHHHHHh
Confidence 543 566666666666666666666554
No 75
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.92 E-value=1e-26 Score=224.27 Aligned_cols=204 Identities=16% Similarity=0.065 Sum_probs=167.5
Q ss_pred HHHHHhCCcccc--cccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccc
Q 007515 95 VKLFVGIDPSVI--YKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEF 172 (600)
Q Consensus 95 v~~Ll~~~~~~~--~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~ 172 (600)
++.|++.+.+.. ...+..+.||||.|+..|+.+++++|++.+.+++..+..|.||||+|+..|+.+++++|++.+.++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 456777776553 344567788999999999999999999999999888888999999999999999999999999887
Q ss_pred cccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHH--HHcCCHHHHHHHHhccccccccccccccc
Q 007515 173 AWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWA--AIKGRINIIDEILSLNLQSAEMRTIHGET 250 (600)
Q Consensus 173 ~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A--a~~g~~~~v~~Ll~~~~~~~~~~~~~g~t 250 (600)
+ ..|..|+||||+|+..|+.+++++|++.|+++....+.+|.||||+| +..|+.+++++|++.+ .+.+..|..|.+
T Consensus 81 n-~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~g-a~~~~~~~~~~~ 158 (229)
T 2vge_A 81 N-SPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVE-QSMGLMNSGAVY 158 (229)
T ss_dssp T-CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHH-HHTTTSGGGEEE
T ss_pred C-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcC-CCcccccCCchH
Confidence 6 78899999999999999999999999999998774457999999999 9999999999999988 467778889999
Q ss_pred hhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHH
Q 007515 251 VLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLL 304 (600)
Q Consensus 251 ~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll 304 (600)
++|.++..+.. ++|++.+ ....++.+|.+|+||||+|+..|+.++|+.++
T Consensus 159 ~l~~~~~~~~~---~~ll~~g-a~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~ 208 (229)
T 2vge_A 159 ALWDYSAEFGD---ELSFREG-ESVTVLRRDGPEETDWWWAALHGQEGYVPRNY 208 (229)
T ss_dssp ESSCBCCSSTT---BCCBCTT-CEEEEEESSCTTCSSEEEEEETTEEEEEEGGG
T ss_pred HHHHHhhcccc---ccCcccc-ccccccccCCCcccHHHHHHHcCCcceeehhh
Confidence 99977666543 3444442 12237889999999999999999988876533
No 76
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.92 E-value=9.8e-25 Score=196.41 Aligned_cols=151 Identities=23% Similarity=0.268 Sum_probs=132.9
Q ss_pred ccHHHHHHHHcCCHHHHHHHHhhchhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHc
Q 007515 10 MERHLFETILRGDTQAFLSLIQQDEAKIKQTVPGSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACRE 89 (600)
Q Consensus 10 ~~~~L~~A~~~gd~~~~~~ll~~~~~~l~~~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~ 89 (600)
..+.|+.|+..|+.+.++.+++.+... ..+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~ 77 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPF---TTDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-RDARTKVDRTPLHMAASE 77 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCC---CCCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCC---CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHc
Confidence 457899999999999999999987653 2477899999999999999999999999887 788999999999999999
Q ss_pred CCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHH
Q 007515 90 GRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKEL 165 (600)
Q Consensus 90 g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~L 165 (600)
|+.+++++|++.++++. ..|..|.||||+|+..|+.+++++|++++.+++..+..|.||||+|+..|+.+++++|
T Consensus 78 ~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 78 GHANIVEVLLKHGADVN-AKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TCHHHHHHHHTTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ChHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999999998874 4588999999999999999999999999888776666677777777777777777665
No 77
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.92 E-value=7.4e-25 Score=197.73 Aligned_cols=153 Identities=20% Similarity=0.159 Sum_probs=91.0
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhC
Q 007515 45 LNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERG 124 (600)
Q Consensus 45 g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g 124 (600)
+.|+||.|+..|+.+++++|++..+..++..|..|.||||+ +..|+.+++++|++.++++. ..|..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPN-VQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHcC
Confidence 45777777777777777777777433466777777777777 77777777777777776653 34666777777777777
Q ss_pred CHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHh
Q 007515 125 RLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLK 201 (600)
Q Consensus 125 ~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~ 201 (600)
+.+++++|++++.+++..+..|.||||.|+..|+.+++++|++. .++. ..|..|.||||+|+..|+.+++++|++
T Consensus 80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~-~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLH-RRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTT-CCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCC-CcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 77777666666655544444444444444444444444444444 2222 334444444444444444444444443
No 78
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.92 E-value=1.4e-24 Score=195.97 Aligned_cols=153 Identities=26% Similarity=0.320 Sum_probs=95.9
Q ss_pred CCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCC
Q 007515 79 METPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGH 158 (600)
Q Consensus 79 g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~ 158 (600)
+.||||.|+..|+.++++.|++.........+..|.||||+ +..|+.+++++|++++.+++..+..|.||||.|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 45778888888888888877776333344556777777777 77777777777777776666555555556666666666
Q ss_pred HHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Q 007515 159 LDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILS 235 (600)
Q Consensus 159 ~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~ 235 (600)
.++++.|++.+.++. ..|..|+||||+|+..|+.+++++|++. +++.. .|.+|.||||+|+..|+.++++.|++
T Consensus 81 ~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~-~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 81 LDTLKVLVEHGADVN-VPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHR-RDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp HHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTC-CCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCC-CcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCC-cCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 666666666555544 4455566666666666666666666655 44432 45555666666666666666655554
No 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=3.7e-26 Score=222.07 Aligned_cols=214 Identities=16% Similarity=0.136 Sum_probs=94.8
Q ss_pred CCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhc
Q 007515 77 EKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMA 156 (600)
Q Consensus 77 ~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~ 156 (600)
..|.||||.|++.|+.++++.|++++.++.. +..|.||||.|+..|+.+++++|++.+.+++..+..|.||||+|+..
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~--~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKF--NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCA 80 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHH
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCccc--CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 3466777777777777777777766666532 34556666666666666666666666665555555555555555555
Q ss_pred CCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCC-CHHHHH--HHcCCHHHHHHH
Q 007515 157 GHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGR-TPLHWA--AIKGRINIIDEI 233 (600)
Q Consensus 157 g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~-tpL~~A--a~~g~~~~v~~L 233 (600)
|+.+++++|++.+.+++ ..|..|+||||+|+..|+.+++++|+++|+++.. .+..|. ||||+| +..|+.+++++|
T Consensus 81 g~~~~v~~Ll~~ga~~~-~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~~~~t~l~~a~~~~~g~~~~~~~L 158 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVNVN-AADSDGWTPLHCAASCNNVQVCKFLVESGAAVFA-MTYSDMQTAADKCEEMEEGYTQCSQFL 158 (239)
T ss_dssp TCHHHHHHHHHHTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCSSSCCCHHHHCCSSSTTCCCHHHHH
T ss_pred CCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcce-ecCCCCcchHHHHHHhhhccHHHHHHH
Confidence 55555555555555543 4455555555555555555555555555555543 233332 555555 444555555555
Q ss_pred HhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCCC----
Q 007515 234 LSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVD---- 309 (600)
Q Consensus 234 l~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad---- 309 (600)
++.+. ..+..+.. ......|..+.++++++...|. +++.|.+.+.+
T Consensus 159 l~~~a-~~~~~~~~---------------------------~~~al~d~~~~~~~eLa~~~G~--~i~vl~~~~~~~~~W 208 (239)
T 1ycs_B 159 YGVQE-KMGIMNKG---------------------------VIYALWDYEPQNDDELPMKEGD--CMTIIHREDEDEIEW 208 (239)
T ss_dssp HHHHH-HTTTTGGG---------------------------EEEESSCBCCSSTTBCCBCSSC--EEEECCCCTTSCSSE
T ss_pred HHhhh-cccccccc---------------------------eEEEEeccCCCCCCcccccCCC--EEEEEEecCCCCCCE
Confidence 55442 12111111 1112235566777777766664 33334444433
Q ss_pred --cccccCCCCCHHHHH
Q 007515 310 --VNAINRKGYTALDVV 324 (600)
Q Consensus 310 --~n~~n~~G~T~l~~a 324 (600)
....++.|.+|.+++
T Consensus 209 w~~~~~~~~G~~P~~yv 225 (239)
T 1ycs_B 209 WWARLNDKEGYVPRNLL 225 (239)
T ss_dssp EEEEETTEEEEEEGGGE
T ss_pred EEEEECCcEEEeehHHe
Confidence 234566777887763
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.91 E-value=1.1e-24 Score=211.72 Aligned_cols=162 Identities=16% Similarity=0.097 Sum_probs=117.7
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHH
Q 007515 43 GSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACE 122 (600)
Q Consensus 43 ~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 122 (600)
..|.||||.|++.|+.+.++.|++.+.+ ++. +..|.||||.|+..|+.+++++|++.++++ ...|..|.||||+|+.
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~-~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~ 79 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMR-VKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAVC 79 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHHH
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCC-ccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHH
Confidence 4689999999999999999999999987 443 477899999999999999999999999876 4558999999999999
Q ss_pred hCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCC-hHHHHH--HhcCcHHHHHHH
Q 007515 123 RGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGH-TPLHLS--CSKGHLEITREL 199 (600)
Q Consensus 123 ~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~-tpLh~A--~~~g~~~iv~~L 199 (600)
.|+.+++++|++++.+++..+..|.||||+|+..|+.+++++|++.+.++. ..|..|. ||||+| +..|+.+++++|
T Consensus 80 ~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~~~~t~l~~a~~~~~g~~~~~~~L 158 (239)
T 1ycs_B 80 AGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVF-AMTYSDMQTAADKCEEMEEGYTQCSQFL 158 (239)
T ss_dssp HTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCSSSCCCHHHHCCSSSTTCCCHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-eecCCCCcchHHHHHHhhhccHHHHHHH
Confidence 999999999999999999888899999999999999999999999999987 5555555 999999 788999999999
Q ss_pred HhcCCCCCC
Q 007515 200 LKLDPDLSS 208 (600)
Q Consensus 200 l~~~~~~~~ 208 (600)
++.+++...
T Consensus 159 l~~~a~~~~ 167 (239)
T 1ycs_B 159 YGVQEKMGI 167 (239)
T ss_dssp HHHHHHTTT
T ss_pred HHhhhcccc
Confidence 999988654
No 81
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.90 E-value=6.7e-24 Score=191.63 Aligned_cols=143 Identities=16% Similarity=0.164 Sum_probs=114.0
Q ss_pred cCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccc-hhh
Q 007515 175 KKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGET-VLH 253 (600)
Q Consensus 175 ~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t-~Lh 253 (600)
..+..|.||||+|+..|+.+++++|++.|+++.. .|..|.||||+|+ .|+.+++++|++.+ ..++.+|..|+| |||
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~-~~~~~~v~~Ll~~g-~~~~~~d~~g~ttpL~ 83 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNA-PNSYGRRPIQVMM-MGSARVAELLLLHG-AEPNCADPATLTRPVH 83 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTC-CCSSSCCTTTSSC-TTCHHHHHHHHTTT-CCCCCCCTTTCCCHHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHH-cCCHHHHHHHHHcC-CCCCCcCCCCCcHHHH
Confidence 4567899999999999999999999999988765 7889999999985 89999999999886 567888889998 999
Q ss_pred HhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCCCcccccCCCCCHHHH
Q 007515 254 LTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDV 323 (600)
Q Consensus 254 ~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad~n~~n~~G~T~l~~ 323 (600)
+|+..|+.+++++|++. +.+++.+|.+|+||||+|+..++.+++++|+++|++++.+|..|.||.+-
T Consensus 84 ~A~~~~~~~~v~~Ll~~---ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~ 150 (156)
T 1bi7_B 84 DAAREGFLDTLVVLHRA---GARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEG 150 (156)
T ss_dssp HHHHHTCHHHHHHHHHH---TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------------
T ss_pred HHHHCCCHHHHHHHHHc---CCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCccccc
Confidence 99999999999999987 67789999999999999999999999999999999999999999999764
No 82
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.89 E-value=4.2e-23 Score=191.92 Aligned_cols=160 Identities=15% Similarity=0.056 Sum_probs=123.7
Q ss_pred hHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcH----HHHHHHHhcCCCCCCCCCCCCCCHHHHHHH
Q 007515 148 TSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHL----EITRELLKLDPDLSSLPDNEGRTPLHWAAI 223 (600)
Q Consensus 148 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~----~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~ 223 (600)
++|+.|+..|+.+.++.+++.+.+.. .|..|+||||+|+..|+. +++++|+++|++++. +|.+|+||||+|+.
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~~~~--~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~-~d~~g~TpLh~a~~ 84 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGYEDK--ESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKS-RTKEGTTLFFPLFQ 84 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSSSCH--HHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSC-CCTTCCCTHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcCcccc--cccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHH
Confidence 47888888899888888887765432 236799999999998875 589999999999866 78899999999999
Q ss_pred cCC------HHHHHHHHhcccccccccccccc-chhhHhHhcC-----chhHHHHHHH-hcccccccCCCCCCCChHhHH
Q 007515 224 KGR------INIIDEILSLNLQSAEMRTIHGE-TVLHLTVKNN-----QYEAVKYLME-TLNITKLANMPDNDGNTILHL 290 (600)
Q Consensus 224 ~g~------~~~v~~Ll~~~~~~~~~~~~~g~-t~Lh~Av~~~-----~~~iv~~Ll~-~~~~~~~~n~~d~~G~T~Lh~ 290 (600)
.|+ .++++.|++.+ .+++.+|..|+ ||||+|+..+ ..+++++|++ . +.++|.+|..|.||||+
T Consensus 85 ~~~~~~~~~~~iv~~Ll~~G-adin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~---gad~~~~d~~G~TpL~~ 160 (186)
T 3t8k_A 85 GGGNDITGTTELCKIFLEKG-ADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQS---GLQLLIKDKWGLTALEF 160 (186)
T ss_dssp HCTTCHHHHHHHHHHHHHTT-CCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTST---TCCTTCCCTTSCCHHHH
T ss_pred cCCcchhhHHHHHHHHHHCC-CCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhc---CCCCcccCCCCCCHHHH
Confidence 887 57788888876 57777888888 8888888744 3457777776 4 56677788888888888
Q ss_pred HHhCCcHHHHHHHHhcCCCccccc
Q 007515 291 ATAGKLTTMVIYLLKLGVDVNAIN 314 (600)
Q Consensus 291 A~~~~~~~iv~~Ll~~gad~n~~n 314 (600)
|++.++.+++++|.+...+.+.++
T Consensus 161 A~~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 161 VKRCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp HHTTTCHHHHHHHHHHHHHHTCCC
T ss_pred HHHcCCHHHHHHHHHHHHHHhccc
Confidence 888888888887776655544443
No 83
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.88 E-value=7.6e-23 Score=180.12 Aligned_cols=128 Identities=16% Similarity=0.213 Sum_probs=78.2
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCC-CChHh
Q 007515 210 PDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDND-GNTIL 288 (600)
Q Consensus 210 ~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~-G~T~L 288 (600)
.+..|.||||.|+..|+.+++++|++.+ ..++.+|..|+||||+|+. ++.+++++|++. +..++.+|.. |+|||
T Consensus 8 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~---g~~~~~~~~~~g~t~L 82 (136)
T 1d9s_A 8 LGGSSDAGLATAAARGQVETVRQLLEAG-ADPNALNRFGRRPIQVMMM-GSAQVAELLLLH---GAEPNCADPATLTRPV 82 (136)
T ss_dssp CCCCCSCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHH---TCCSSCCBTTTTBCHH
T ss_pred CCCCCccHHHHHHHcCCHHHHHHHHHcC-CCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHC---CCCCCCcCCCCCCCHH
Confidence 4555666666666666666666666554 3445555566666666666 666666666655 4455666666 66666
Q ss_pred HHHHhCCcHHHHHHHHhcCCCcccccCCCCCHHHHHhhhcCCcchhhHHHHHHHhccc
Q 007515 289 HLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGAR 346 (600)
Q Consensus 289 h~A~~~~~~~iv~~Ll~~gad~n~~n~~G~T~l~~a~~~a~~~~~~~i~~~L~~~ga~ 346 (600)
|+|+..++.+++++|+++|++++.+|..|.|||++|.. .++.+++++|+++||+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~----~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 83 HDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEE----QGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHH----HTCHHHHHHHHHHHCC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH----cCCHHHHHHHHHcCCC
Confidence 66666666666666666666666666666666666443 3445666666666653
No 84
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.88 E-value=2.2e-22 Score=177.11 Aligned_cols=130 Identities=16% Similarity=0.190 Sum_probs=121.5
Q ss_pred ccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccc-ccchh
Q 007515 174 WKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIH-GETVL 252 (600)
Q Consensus 174 ~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~-g~t~L 252 (600)
+..|..|.||||+|+..|+.+++++|++.++++.. .|..|.||||+|+. |+.+++++|++.+ ..++.+|.. |+|||
T Consensus 6 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~-~~~~~v~~Ll~~g-~~~~~~~~~~g~t~L 82 (136)
T 1d9s_A 6 HMLGGSSDAGLATAAARGQVETVRQLLEAGADPNA-LNRFGRRPIQVMMM-GSAQVAELLLLHG-AEPNCADPATLTRPV 82 (136)
T ss_dssp SCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCTTTTTSTT-SCHHHHHHHHHHT-CCSSCCBTTTTBCHH
T ss_pred cCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCC-cCCCCCCHHHHHHc-CCHHHHHHHHHCC-CCCCCcCCCCCCCHH
Confidence 37788999999999999999999999999999865 78999999999999 9999999999987 467788888 99999
Q ss_pred hHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCCC
Q 007515 253 HLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVD 309 (600)
Q Consensus 253 h~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad 309 (600)
|+|+..++.+++++|++. +.+++.+|..|+||||+|+..++.+++++|+++|+|
T Consensus 83 ~~A~~~~~~~~v~~Ll~~---ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 83 HDAAREGFLDTLVVLHRA---GARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHTCHHHHHHHHHT---CCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHcCCHHHHHHHHHc---CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999987 667899999999999999999999999999999986
No 85
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.87 E-value=1.4e-21 Score=168.86 Aligned_cols=126 Identities=38% Similarity=0.612 Sum_probs=93.1
Q ss_pred CCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhc
Q 007515 179 NGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKN 258 (600)
Q Consensus 179 ~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~ 258 (600)
+|+||||+|+..|+.+++++|++.++++.. .+..|.||||.|+..|+.+++++|++.+ ...+.+|..|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARN 78 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHc
Confidence 477788888888888888888887777654 5677778888888888888877777765 34556666777777777777
Q ss_pred CchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCCC
Q 007515 259 NQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVD 309 (600)
Q Consensus 259 ~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad 309 (600)
++.+++++|++. +..++.+|..|+||||+|+..++.+++++|+++|+|
T Consensus 79 ~~~~~~~~Ll~~---g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 79 GHLEVVKLLLEA---GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred ChHHHHHHHHHc---CCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 777777777765 455667777777777777777777777777777765
No 86
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.86 E-value=1.1e-22 Score=189.21 Aligned_cols=157 Identities=13% Similarity=0.045 Sum_probs=136.0
Q ss_pred CChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCH----HHHHHHHhccccccccccccccchhhHh
Q 007515 180 GHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRI----NIIDEILSLNLQSAEMRTIHGETVLHLT 255 (600)
Q Consensus 180 g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~----~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A 255 (600)
+.++|+.|+..|+.+.++.+++.+.+. ..+..|+||||+|+.+|+. +++++|++.+ .+++.+|..|+||||+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~G-advn~~d~~g~TpLh~a 82 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLINKG-ADIKSRTKEGTTLFFPL 82 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTT-CCSSCCCTTCCCTHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCC-CCCCCCCCCCCcHHHHH
Confidence 568999999999999999999887543 1236799999999999985 5899999987 67888999999999999
Q ss_pred HhcCc------hhHHHHHHHhcccccccCCCCCCCC-hHhHHHHhCC-----cHHHHHHHHh-cCCCcccccCCCCCHHH
Q 007515 256 VKNNQ------YEAVKYLMETLNITKLANMPDNDGN-TILHLATAGK-----LTTMVIYLLK-LGVDVNAINRKGYTALD 322 (600)
Q Consensus 256 v~~~~------~~iv~~Ll~~~~~~~~~n~~d~~G~-T~Lh~A~~~~-----~~~iv~~Ll~-~gad~n~~n~~G~T~l~ 322 (600)
+..++ .+++++|++. +.++|.+|..|+ ||||+|+..+ +.+++++|++ +|+|+|.+|..|.||||
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~---Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~ 159 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEK---GADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALE 159 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHT---TCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHH
T ss_pred HHcCCcchhhHHHHHHHHHHC---CCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHH
Confidence 99887 5789999987 778999999999 9999999954 4569999998 99999999999999999
Q ss_pred HHhhhcCCcchhhHHHHHHHhccc
Q 007515 323 VVESDASNSGALQIVPALEEAGAR 346 (600)
Q Consensus 323 ~a~~~a~~~~~~~i~~~L~~~ga~ 346 (600)
+|. ..++.+++++|.+...+
T Consensus 160 ~A~----~~~~~~~v~~L~~~~~~ 179 (186)
T 3t8k_A 160 FVK----RCQKPIALKMMEDYIKK 179 (186)
T ss_dssp HHH----TTTCHHHHHHHHHHHHH
T ss_pred HHH----HcCCHHHHHHHHHHHHH
Confidence 954 45777889888877644
No 87
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.86 E-value=6e-22 Score=178.75 Aligned_cols=140 Identities=17% Similarity=0.121 Sum_probs=65.4
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCc-HHHHH
Q 007515 42 PGSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNES-VLYVA 120 (600)
Q Consensus 42 ~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~t-pL~~A 120 (600)
+..|.|+||+|+..|+.++|++|++.+.+ ++.+|..|.||||+|+ .|+.+++++|++.+.++. ..+..|.| |||+|
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~-~~d~~g~ttpL~~A 85 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGAN-PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPN-CADPATLTRPVHDA 85 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCC-TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCC-CCCTTTCCCHHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCC-CcCCCCCcHHHHHH
Confidence 34455555555555555555555555544 4555555555555553 555555555555554442 22444444 55555
Q ss_pred HHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHH
Q 007515 121 CERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELL 200 (600)
Q Consensus 121 ~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll 200 (600)
+..|+.+++++|++++.+++ .+|..|+||||+|+..|+.+++++|+
T Consensus 86 ~~~~~~~~v~~Ll~~ga~~~----------------------------------~~d~~g~tpl~~A~~~~~~~~v~~Ll 131 (156)
T 1bi7_B 86 AREGFLDTLVVLHRAGARLD----------------------------------VRDAWGRLPVDLAEELGHRDVARYLR 131 (156)
T ss_dssp HHHTCHHHHHHHHHHTCCSS----------------------------------CCCTTCCCHHHHHHHHTCHHHHHHHS
T ss_pred HHCCCHHHHHHHHHcCCCCc----------------------------------ccCCCCCCHHHHHHHhCHHHHHHHHH
Confidence 54444444444444444333 34445555555555555555555555
Q ss_pred hcCCCCCCCCCCCCCCHHH
Q 007515 201 KLDPDLSSLPDNEGRTPLH 219 (600)
Q Consensus 201 ~~~~~~~~~~d~~g~tpL~ 219 (600)
++|+++.. .+..|.||.+
T Consensus 132 ~~ga~~~~-~~~~g~t~~~ 149 (156)
T 1bi7_B 132 AAAGGTRG-SNHARIDAAE 149 (156)
T ss_dssp SCC----------------
T ss_pred HcCCCCCc-cCcCcCcccc
Confidence 55555433 4455555544
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.86 E-value=2.1e-21 Score=170.83 Aligned_cols=126 Identities=22% Similarity=0.254 Sum_probs=96.7
Q ss_pred CCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhH
Q 007515 177 DLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTV 256 (600)
Q Consensus 177 d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av 256 (600)
...+.||||+|+..|+.+++++|++.|+++.. .|..|.||||+|+..|+.++++.|++.+ .+++..|..|.||||+|+
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNA-KDEYGLTPLYLATAHGHLEIVEVLLKNG-ADVNAVDAIGFTPLHLAA 88 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHH
Confidence 44577888888888888888888888877654 6777888888888888888888888765 456667777778888888
Q ss_pred hcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcC
Q 007515 257 KNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLG 307 (600)
Q Consensus 257 ~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~g 307 (600)
..++.+++++|++. +..++.+|.+|+||||+|+..++.+++++|++.|
T Consensus 89 ~~~~~~~v~~Ll~~---g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 89 FIGHLEIAEVLLKH---GADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HcCCHHHHHHHHHc---CCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 88888888888776 5567777888888888888888888888887765
No 89
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.85 E-value=1.9e-21 Score=171.35 Aligned_cols=127 Identities=24% Similarity=0.346 Sum_probs=94.9
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhH
Q 007515 210 PDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILH 289 (600)
Q Consensus 210 ~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh 289 (600)
+|.+|.||||+|+..|+.+++++|++.+ ..++..|..|+||||+|+..++.+++++|++. +.+++.+|..|+||||
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~~~~g~t~L~ 81 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNG-SDPNVKDHAGWTPLHEACNHGHLKVVELLLQH---KALVNTTGYQNDSPLH 81 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCGGGCCHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCcccCcCCCCCCHHH
Confidence 5666777777777777777777777655 34556666777777777777777777777765 5567888889999999
Q ss_pred HHHhCCcHHHHHHHHhcCCCcccccCCCCCHHHHHhhhcCCcchhhHHHHHHHhc
Q 007515 290 LATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAG 344 (600)
Q Consensus 290 ~A~~~~~~~iv~~Ll~~gad~n~~n~~G~T~l~~a~~~a~~~~~~~i~~~L~~~g 344 (600)
+|+..++.+++++|+++|++++.+|..|.||+++ +...+..+++.+|.+.+
T Consensus 82 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~----A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 82 DAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDY----TDDESMKSLLLLPEKNE 132 (137)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGG----CCCHHHHHHHSCC----
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH----HhhccHHHHHhhccccc
Confidence 9999999999999999999999999999999998 44555666666655544
No 90
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.85 E-value=6.4e-21 Score=167.69 Aligned_cols=125 Identities=22% Similarity=0.214 Sum_probs=93.7
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHH
Q 007515 42 PGSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVAC 121 (600)
Q Consensus 42 ~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~ 121 (600)
...+.|+||+||..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++.++++. ..|..|.||||+|+
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGAD-VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVN-AVDAIGFTPLHLAA 88 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCCHHHHHH
Confidence 34578888888888888888888888776 67788888888888888888888888888877764 34777888888888
Q ss_pred HhCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhc
Q 007515 122 ERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEA 168 (600)
Q Consensus 122 ~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~ 168 (600)
..|+.+++++|++++.+++..+..|.||||+|+..|+.+++++|++.
T Consensus 89 ~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred HcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 88888888888877776655555555566666666666666655543
No 91
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.85 E-value=1.5e-20 Score=162.37 Aligned_cols=122 Identities=37% Similarity=0.491 Sum_probs=75.3
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhC
Q 007515 45 LNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERG 124 (600)
Q Consensus 45 g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g 124 (600)
|.||||.|+..|+.+++++|++.+.+ ++..|..|.||||+|+..|+.+++++|++.+.++. ..+..|.||||+|+..|
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTT
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCc-ccCCCCCcHHHHHHHcC
Confidence 66777777777777777777777665 56666777777777777777777777777666553 33556666666666666
Q ss_pred CHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhc
Q 007515 125 RLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEA 168 (600)
Q Consensus 125 ~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~ 168 (600)
+.+++++|++++.+++..+..+.||||.|+..++.+++++|+++
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 123 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 123 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 66666666666555443333344444444444444444444443
No 92
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.83 E-value=4e-22 Score=194.09 Aligned_cols=44 Identities=30% Similarity=0.431 Sum_probs=21.5
Q ss_pred CCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHH
Q 007515 178 LNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAA 222 (600)
Q Consensus 178 ~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa 222 (600)
..|+||||+|+..|+.+++++|+++|+++.. .|..|.||||+|+
T Consensus 109 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~t~l~~A~ 152 (244)
T 3ui2_A 109 RGGLTALHMAAGYVRPEVVEALVELGADIEV-EDERGLTALELAR 152 (244)
T ss_dssp SSCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHH
Confidence 3445555555555555555555555544432 4444555555544
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.83 E-value=1.3e-20 Score=183.39 Aligned_cols=139 Identities=19% Similarity=0.217 Sum_probs=76.8
Q ss_pred CCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCccccccc-CCCChHHHHHHhc
Q 007515 78 KMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEV-DGLTTSLHVSAMA 156 (600)
Q Consensus 78 ~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~-~~~~t~Lh~A~~~ 156 (600)
.|.||||+|++.|+.++++.|++ +.++ ...|..|.||||+|+..|+.+++++|++++.+++..+ ..|.||||.|+..
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence 44555555555555555555555 3333 2234555555555555555555555555555554443 3455555555555
Q ss_pred CCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Q 007515 157 GHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSL 236 (600)
Q Consensus 157 g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~ 236 (600)
|+.++++.|++.+.++. ..|..|+||||+|+..++. ..+.+|||+|+..|+.++++.|++.
T Consensus 122 g~~~~v~~Ll~~ga~~~-~~d~~g~t~l~~A~~~~~~------------------~~~~~~l~~a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 122 VRPEVVEALVELGADIE-VEDERGLTALELAREILKT------------------TPKGNPMQFGRRIGLEKVINVLEGQ 182 (244)
T ss_dssp TCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHHHTT------------------CCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCC-CCCCCCCcHHHHHHHHHhc------------------cCCCCHHHHHHHcChHHHHHHHHHh
Confidence 55555555555555544 4556666666666543222 2356677777777777777777664
Q ss_pred c
Q 007515 237 N 237 (600)
Q Consensus 237 ~ 237 (600)
.
T Consensus 183 ~ 183 (244)
T 3ui2_A 183 V 183 (244)
T ss_dssp H
T ss_pred c
Confidence 3
No 94
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.83 E-value=1.4e-20 Score=174.67 Aligned_cols=140 Identities=19% Similarity=0.137 Sum_probs=112.2
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHH
Q 007515 43 GSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACE 122 (600)
Q Consensus 43 ~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 122 (600)
..|.||||.|+..|+.++++.|++ +.+ ++.+|..|.||||+|+..|+.+++++|++.++++....+..|.||||+|+.
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-TSC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 457899999999999999999998 554 788888999999999999999999999998888765544788888888888
Q ss_pred hCCHHHHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhc
Q 007515 123 RGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKL 202 (600)
Q Consensus 123 ~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~ 202 (600)
.|+.+++++|++++.+++..+..|.||||+|+..++ ...+.+||++|+..|+.++++.|.++
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~------------------~~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEVEDERGLTALELAREILK------------------TTPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHH------------------TCCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred cCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhcc------------------CcccccHHHHHHHcCHHHHHHHHHHh
Confidence 888888888888888887777777788888876332 12456778888877777777777654
No 95
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.83 E-value=4.7e-21 Score=183.59 Aligned_cols=139 Identities=19% Similarity=0.269 Sum_probs=101.0
Q ss_pred CCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHh
Q 007515 176 KDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLT 255 (600)
Q Consensus 176 ~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A 255 (600)
.|.+|.||||+||..|+.++++.|++.++++.. .|..|.||||+|+..|+.++++.|++.....++.+|..|+||||+|
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A 147 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNG-LDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAA 147 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHH
Confidence 356788999999999999999999999888765 7888999999999999999999998875566777777888888888
Q ss_pred HhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCCCcccccCCCC
Q 007515 256 VKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGY 318 (600)
Q Consensus 256 v~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad~n~~n~~G~ 318 (600)
+..|+.+++++|++. +..++.+|.+|+||||+|+..++.++++.|++.|++.+..|.+|.
T Consensus 148 ~~~~~~~~v~~Ll~~---ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 148 AWKGYADIVQLLLAK---GARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp HHHTCHHHHHHHHHH---TCCSCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred HHcCCHHHHHHHHHc---CCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 888888888888776 556777888888888888888888888888888887777766543
No 96
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.83 E-value=7.9e-21 Score=167.29 Aligned_cols=128 Identities=22% Similarity=0.295 Sum_probs=103.5
Q ss_pred cCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhH
Q 007515 175 KKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHL 254 (600)
Q Consensus 175 ~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~ 254 (600)
.+|.+|+||||+|+..|+.+++++|++.++++.. .|..|.||||+|+..|+.+++++|++.+ ...+..|..|+||||+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~ 82 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNV-KDHAGWTPLHEACNHGHLKVVELLLQHK-ALVNTTGYQNDSPLHD 82 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCGGGCCHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHHHcCCHHHHHHHHHcC-CcccCcCCCCCCHHHH
Confidence 4677888888888888888888888888888755 6788888888888888888888888876 4667778888888888
Q ss_pred hHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcC
Q 007515 255 TVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLG 307 (600)
Q Consensus 255 Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~g 307 (600)
|+..++.+++++|++. +.+++.+|.+|+||||+|+..+..+++++|.+.+
T Consensus 83 A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 83 AAKNGHVDIVKLLLSY---GASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp HHHTTCHHHHHHHHHT---TCCTTCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred HHHcCCHHHHHHHHHc---CCCCCCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 8888888888888876 5668888888999999888888888777666544
No 97
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.81 E-value=4.8e-20 Score=159.02 Aligned_cols=108 Identities=21% Similarity=0.262 Sum_probs=76.4
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHH
Q 007515 213 EGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLAT 292 (600)
Q Consensus 213 ~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~ 292 (600)
.|.||||.|+..|+.++++.|++.+. .++.+|..|+||||+|+..++.+++++|++. +.++|.+|.+|+||||+|+
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGE-DVNRTLEGGRKPLHYAADCGQLEILEFLLLK---GADINAPDKHHITPLLSAV 81 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTC-CTTSCCTTSSCHHHHHHHTTCHHHHHHHHTT---TCCTTCCCTTSCCHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCC-CcCccCCCCCcHHHHHHHcCCHHHHHHHHHc---CCCCCcCCCCCCCHHHHHH
Confidence 44555555555555555555555442 3445555566666666666666666666654 4457778888999999999
Q ss_pred hCCcHHHHHHHHhcCCCcccccCCCCCHHHHH
Q 007515 293 AGKLTTMVIYLLKLGVDVNAINRKGYTALDVV 324 (600)
Q Consensus 293 ~~~~~~iv~~Ll~~gad~n~~n~~G~T~l~~a 324 (600)
..++.+++++|+++|++++.+|.+|.||+++|
T Consensus 82 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGADKTVKGPDGLTAFEAT 113 (123)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHh
Confidence 99999999999988999999999999999885
No 98
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.81 E-value=3.2e-20 Score=172.19 Aligned_cols=111 Identities=22% Similarity=0.261 Sum_probs=54.1
Q ss_pred CCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcccccccCCCChHHHHHHhc
Q 007515 77 EKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSAMA 156 (600)
Q Consensus 77 ~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~ 156 (600)
..|.||||+|+..|+.++++.|++ +.++ ...|..|.||||+|+..|+.+++++|++++.+++..+
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~------------- 106 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRD------------- 106 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-------------
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCC-------------
Confidence 344555555555555555555554 3333 2234444444444444444444444444444333222
Q ss_pred CCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHH
Q 007515 157 GHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAI 223 (600)
Q Consensus 157 g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~ 223 (600)
+..|+||||+|+..|+.+++++|+++|+++.. +|.+|.||||+|+.
T Consensus 107 --------------------~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~tpl~~A~~ 152 (183)
T 3deo_A 107 --------------------MRGGLTALHMAAGYVRPEVVEALVELGADIEV-EDERGLTALELARE 152 (183)
T ss_dssp --------------------SSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHH
T ss_pred --------------------CCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcC-CCCCCCCHHHHHHH
Confidence 24455555555555555555555555555433 45555555555554
No 99
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.80 E-value=1.6e-19 Score=181.15 Aligned_cols=143 Identities=20% Similarity=0.104 Sum_probs=121.2
Q ss_pred CCCCcHhHHHHHcCCHHHHHHHHhCCcccccc-----cCCCCCcHHHHHHHh---CCHHHHHHHHhCCcccccccCCCCh
Q 007515 77 EKMETPLHEACREGRLNFVKLFVGIDPSVIYK-----LNRDNESVLYVACER---GRLDVAKQLLNYSSLLILEVDGLTT 148 (600)
Q Consensus 77 ~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~-----~~~~g~tpL~~A~~~---g~~e~v~~Ll~~~~~~~~~~~~~~t 148 (600)
..+.++|+.|+..|+.+.++.|++.++++... .+..|.||||+|+.. |+.+++++|++++++++..+..|.|
T Consensus 149 ~~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~T 228 (301)
T 2b0o_E 149 TPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNT 228 (301)
T ss_dssp C-CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCC
T ss_pred CchHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCC
Confidence 33557899999999999999999999887553 578899999999997 8999999999999999888888999
Q ss_pred HHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCH
Q 007515 149 SLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRI 227 (600)
Q Consensus 149 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~ 227 (600)
|||+|+..|+.+++++|++.++++. .+|..|.||||+|+..|+.+++++|++.+++ .|.||||+|+..|+.
T Consensus 229 pLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLKGRALVG-TVNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCCS-CCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC--------
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhHHHHhcCCc
Confidence 9999999999999999999998886 7899999999999999999999999999887 378999999998874
No 100
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.79 E-value=1.5e-19 Score=155.81 Aligned_cols=111 Identities=14% Similarity=0.148 Sum_probs=83.6
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHH
Q 007515 42 PGSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVAC 121 (600)
Q Consensus 42 ~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~ 121 (600)
+..|+|+||.|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++.++++. ..|..|.||||+|+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN-APDKHHITPLLSAV 81 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCC-TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTT-CCCTTSCCHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCC-cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCCHHHHHH
Confidence 34577888888888888888888887776 67778888888888888888888888888877763 44777888888888
Q ss_pred HhCCHHHHHHHHhCCcccccccCCCChHHHHHH
Q 007515 122 ERGRLDVAKQLLNYSSLLILEVDGLTTSLHVSA 154 (600)
Q Consensus 122 ~~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh~A~ 154 (600)
..|+.+++++|++++.+++..+..|.||||+|.
T Consensus 82 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCC
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhC
Confidence 888888888887777776666666666666663
No 101
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.79 E-value=3.7e-19 Score=178.43 Aligned_cols=142 Identities=19% Similarity=0.185 Sum_probs=114.1
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhcCcccccc-----CCCCCChHHHHHHhc---CcHHHHHHHHhcCCCCCCCCCCCCCC
Q 007515 145 GLTTSLHVSAMAGHLDIVKELLEARQEFAWK-----KDLNGHTPLHLSCSK---GHLEITRELLKLDPDLSSLPDNEGRT 216 (600)
Q Consensus 145 ~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~-----~d~~g~tpLh~A~~~---g~~~iv~~Ll~~~~~~~~~~d~~g~t 216 (600)
...++|+.|+..|+.+.++.|++.+.++... .|..|+||||+|+.. ++.+++++|++.|++++. .|.+|+|
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~-~d~~G~T 228 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA-KAADGNT 228 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTC-CCTTCCC
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCC-CCCCCCC
Confidence 3456899999999999999999888887632 588899999999987 889999999999998765 7888999
Q ss_pred HHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCc
Q 007515 217 PLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKL 296 (600)
Q Consensus 217 pL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~ 296 (600)
|||+|+..|+.+++++|++.+ .+++.+|..|+||||+|+..++.+++++|++.... .|+||||+|+..|+
T Consensus 229 pLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~---------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLKGR-ALVGTVNEAGETALDIARKKHHKECEELLEQAQAG---------TFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTT-CCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH---------TTSSCCC-------
T ss_pred HHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC---------CCCChhHHHHhcCC
Confidence 999999999999999999876 56778888999999999999999999999987432 47899999998875
Q ss_pred H
Q 007515 297 T 297 (600)
Q Consensus 297 ~ 297 (600)
.
T Consensus 299 ~ 299 (301)
T 2b0o_E 299 S 299 (301)
T ss_dssp -
T ss_pred c
Confidence 3
No 102
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.79 E-value=8.4e-19 Score=173.81 Aligned_cols=192 Identities=17% Similarity=0.134 Sum_probs=124.9
Q ss_pred cCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHhCCcc-cccccCCCChHHHHH
Q 007515 75 ENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLNYSSL-LILEVDGLTTSLHVS 153 (600)
Q Consensus 75 ~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~-~~~~~~~~~t~Lh~A 153 (600)
.|..+.++|+.+...||..+.+++...-+.........+.... .....-..+++...... .........++|+.|
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~----~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a 137 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMI----ARKDYITAKYMERRYARKKHADTAAKLHSLCEA 137 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHH----HHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHH----HHHHHHHHHHHHhhcccccccccchhhhhhhhH
Confidence 4566777888888888877766654432222110011111111 11111122233222111 111111223478888
Q ss_pred HhcCCHHHHHHHHhcCccccc-----cCCCCCChHHHHHHhc---CcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcC
Q 007515 154 AMAGHLDIVKELLEARQEFAW-----KKDLNGHTPLHLSCSK---GHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKG 225 (600)
Q Consensus 154 ~~~g~~~~v~~Ll~~~~~~~~-----~~d~~g~tpLh~A~~~---g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g 225 (600)
+..|+.+.++.+++.+.+... ..|..|+||||+|+.. |+.+++++|+++|++++. +|..|+||||+|+..|
T Consensus 138 ~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~-~d~~g~TpLh~A~~~g 216 (278)
T 1dcq_A 138 VKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDK-QTGKGSTALHYCCLTD 216 (278)
T ss_dssp HHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTC-CCTTCCCHHHHHHHTT
T ss_pred hhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccc-cCCCCCCHHHHHHHcC
Confidence 888888888888888777532 3367788888888888 788888888888888765 6788888888888888
Q ss_pred CHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhcc
Q 007515 226 RINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLN 272 (600)
Q Consensus 226 ~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~ 272 (600)
+.++++.|++.+ .+++.+|..|+||||+|+..|+.+++++|++...
T Consensus 217 ~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 217 NAECLKLLLRGK-ASIEIANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp CHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHcC-CCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 888888888866 5677788888888888888888888888888743
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.78 E-value=8.5e-19 Score=173.75 Aligned_cols=192 Identities=15% Similarity=0.070 Sum_probs=89.9
Q ss_pred cCCCCCcHHHHHHHhCCHHHHHHHHhCCccccc-ccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHH
Q 007515 109 LNRDNESVLYVACERGRLDVAKQLLNYSSLLIL-EVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLS 187 (600)
Q Consensus 109 ~~~~g~tpL~~A~~~g~~e~v~~Ll~~~~~~~~-~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A 187 (600)
.|..+.++++.+...|+..+.+++...-..... .+....... .....-..+++...........+....++|+.|
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~----~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a 137 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMI----ARKDYITAKYMERRYARKKHADTAAKLHSLCEA 137 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHH----HHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHH----HHHHHHHHHHHHhhcccccccccchhhhhhhhH
Confidence 466777788888888887776665443222111 111111010 001111111221111111101111223567777
Q ss_pred HhcCcHHHHHHHHhcCCCCCCC-----CCCCCCCHHHHHHHc---CCHHHHHHHHhccccccccccccccchhhHhHhcC
Q 007515 188 CSKGHLEITRELLKLDPDLSSL-----PDNEGRTPLHWAAIK---GRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNN 259 (600)
Q Consensus 188 ~~~g~~~iv~~Ll~~~~~~~~~-----~d~~g~tpL~~Aa~~---g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~ 259 (600)
+..|+.+.+..+++.|++.... .+..|.||||+|+.. |+.+++++|++.+ .+++.+|..|+||||+|+..|
T Consensus 138 ~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g-a~in~~d~~g~TpLh~A~~~g 216 (278)
T 1dcq_A 138 VKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS-GNLDKQTGKGSTALHYCCLTD 216 (278)
T ss_dssp HHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC-SCTTCCCTTCCCHHHHHHHTT
T ss_pred hhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCC-CCccccCCCCCCHHHHHHHcC
Confidence 7777777777777776664321 245555666666555 5555555555544 233444444444444444444
Q ss_pred chhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCC
Q 007515 260 QYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGV 308 (600)
Q Consensus 260 ~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ga 308 (600)
+.+++++|++. +.+++.+|.+|.||||+|+..|+.+++++|+++|+
T Consensus 217 ~~~~v~~Ll~~---gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 217 NAECLKLLLRG---KASIEIANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp CHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHc---CCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 44444444443 33344444444444444444444444444444443
No 104
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.77 E-value=2.5e-19 Score=171.57 Aligned_cols=164 Identities=21% Similarity=0.262 Sum_probs=93.6
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHHhC--------------chhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccc
Q 007515 41 VPGSLNTILHLTARFGHEELASEILKLC--------------PEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVI 106 (600)
Q Consensus 41 ~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~--------------~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~ 106 (600)
.+..+.++.+++++.|....+..+.+.+ ...++..+..|.||||+||..|+.+++++|++.+.++.
T Consensus 21 ~d~~~~~~~el~~~~Gd~~~v~~~~~~~w~~~~~~g~~gl~p~~~v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 100 (222)
T 3ehr_A 21 YTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVN 100 (222)
T ss_dssp SCCCCSSTTBCCCCTTCEEEEEECCSSSEEEEEETTEEEEEEHHHHHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred CCcCCCCCCcccccCCCEEEEeccccchhHhcccCCcceeechhhccccccccccccccccccCcHHHHHHHHhCCCCcc
Confidence 4445566666666666544332221111 01233445566777777777777777777777766653
Q ss_pred cccCCCCCcHHHHHHHhCCHHHHHHHHhC-CcccccccCCCChHHHHHHhcCCHHHHHHHHhcCccccccCCCCCChHHH
Q 007515 107 YKLNRDNESVLYVACERGRLDVAKQLLNY-SSLLILEVDGLTTSLHVSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLH 185 (600)
Q Consensus 107 ~~~~~~g~tpL~~A~~~g~~e~v~~Ll~~-~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh 185 (600)
..|..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.+.++. .+|..|.||||
T Consensus 101 -~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~ 178 (222)
T 3ehr_A 101 -GLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTD-LRNIEKKLAFD 178 (222)
T ss_dssp -CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSC-CCCTTSCCHHH
T ss_pred -ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-cccCCCCCHHH
Confidence 3466677777777777777777777776 66665555555556666666666666666666655554 45556666666
Q ss_pred HHHhcCcHHHHHHHHhcCCCC
Q 007515 186 LSCSKGHLEITRELLKLDPDL 206 (600)
Q Consensus 186 ~A~~~g~~~iv~~Ll~~~~~~ 206 (600)
+|+..++.++++.|++.++..
T Consensus 179 ~A~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 179 MATNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp HCCSHHHHHHHC---------
T ss_pred HhcchhHHHHHHHHhccchhh
Confidence 666666666666666655543
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.75 E-value=4.2e-18 Score=174.79 Aligned_cols=146 Identities=15% Similarity=0.122 Sum_probs=109.6
Q ss_pred CCCCCChHHHHHHhc-CcHHHHHHHHhcCCCCCCCCC--CCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchh
Q 007515 176 KDLNGHTPLHLSCSK-GHLEITRELLKLDPDLSSLPD--NEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVL 252 (600)
Q Consensus 176 ~d~~g~tpLh~A~~~-g~~~iv~~Ll~~~~~~~~~~d--~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L 252 (600)
.+..+.|+||.|+.. ++.++++.|++.|++++. .+ ..|.||||+|+..|+.+++++|++.+ .+++..|..|+|||
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~-~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~G-advn~~d~~G~TpL 272 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADVNW-VNGGQDNATPLIQATAANSLLACEFLLQNG-ANVNQADSAGRGPL 272 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTC-CCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHH
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCc-cccccCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCCCCCCCCHH
Confidence 344677899999998 999999999999998865 45 78899999999999999999999876 56778888999999
Q ss_pred hHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcC---CCcccccCCCCCHHHHHhh
Q 007515 253 HLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLG---VDVNAINRKGYTALDVVES 326 (600)
Q Consensus 253 h~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~g---ad~n~~n~~G~T~l~~a~~ 326 (600)
|+|+..|+.+++++|++. +.+++.+|.+|+||||+|+..++.+++++|++.+ ++....+..+.|+++++..
T Consensus 273 h~A~~~g~~~~v~~LL~~---Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~ 346 (368)
T 3jue_A 273 HHATILGHTGLACLFLKR---GADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRD 346 (368)
T ss_dssp HHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC---------------------
T ss_pred HHHHHcCcHHHHHHHHHC---cCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHH
Confidence 999999999999999987 6678899999999999999999999999998654 5555677788999988654
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.75 E-value=3e-18 Score=175.92 Aligned_cols=128 Identities=22% Similarity=0.221 Sum_probs=80.9
Q ss_pred CCCCCHHHHHHHc-CCHHHHHHHHhcccccccccc--ccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHh
Q 007515 212 NEGRTPLHWAAIK-GRINIIDEILSLNLQSAEMRT--IHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTIL 288 (600)
Q Consensus 212 ~~g~tpL~~Aa~~-g~~~~v~~Ll~~~~~~~~~~~--~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~L 288 (600)
..+.||||.|+.. |+.++++.|++.+ .+++..+ ..|.||||+|+..|+.+++++|++. +.++|.+|..|+|||
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~G-advn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~---Gadvn~~d~~G~TpL 272 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHG-ADVNWVNGGQDNATPLIQATAANSLLACEFLLQN---GANVNQADSAGRGPL 272 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTT-CCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcC-CCCCccccccCCCCHHHHHHHCCCHHHHHHHHHc---CCCCCCCCCCCCCHH
Confidence 3455666666666 6666666666655 3344444 5666666666666666666666665 455666666666666
Q ss_pred HHHHhCCcHHHHHHHHhcCCCcccccCCCCCHHHHHhhhcCCcchhhHHHHHHHhcccc
Q 007515 289 HLATAGKLTTMVIYLLKLGVDVNAINRKGYTALDVVESDASNSGALQIVPALEEAGARR 347 (600)
Q Consensus 289 h~A~~~~~~~iv~~Ll~~gad~n~~n~~G~T~l~~a~~~a~~~~~~~i~~~L~~~ga~~ 347 (600)
|+|+..|+.+++++|+++|++++.+|.+|.|||++|.. .++.+++++|+.++...
T Consensus 273 h~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~----~g~~~iv~lLl~~~~~~ 327 (368)
T 3jue_A 273 HHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAME----TANADIVTLLRLAKMRE 327 (368)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHHHC--
T ss_pred HHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHH----CCCHHHHHHHHHcCCCc
Confidence 66666666666666666666666666666666666432 34556666666665443
No 107
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.75 E-value=1.9e-18 Score=146.93 Aligned_cols=108 Identities=34% Similarity=0.402 Sum_probs=90.3
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhH
Q 007515 210 PDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILH 289 (600)
Q Consensus 210 ~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh 289 (600)
+|.+|.||||+|+..|+.++++.|++.+ ..++..|..|.||||+|+..++.+++++|++. +..++.+|..|+||||
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~d~~g~tpl~ 80 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKG-ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAK---GADVNARSKDGNTPEH 80 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTT-CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTT---TCCTTCCCTTCCCTTH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc---CCCCcccCCCCCCHHH
Confidence 5677888888888888888888888766 35666777888888888888888888888876 5678889999999999
Q ss_pred HHHhCCcHHHHHHHHhcCCCcccccCCCCCHH
Q 007515 290 LATAGKLTTMVIYLLKLGVDVNAINRKGYTAL 321 (600)
Q Consensus 290 ~A~~~~~~~iv~~Ll~~gad~n~~n~~G~T~l 321 (600)
+|+..++.+++++|+++|+++|.++..|.||-
T Consensus 81 ~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 81 LAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp HHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999999999999984
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.75 E-value=4.7e-18 Score=182.89 Aligned_cols=138 Identities=17% Similarity=0.166 Sum_probs=112.5
Q ss_pred CChHHHHHHhcCcHHHHHHHHhcCCCCCCC-----CCCCCCCHHHHHHH---cCCHHHHHHHHhccccccccccccccch
Q 007515 180 GHTPLHLSCSKGHLEITRELLKLDPDLSSL-----PDNEGRTPLHWAAI---KGRINIIDEILSLNLQSAEMRTIHGETV 251 (600)
Q Consensus 180 g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~-----~d~~g~tpL~~Aa~---~g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 251 (600)
..+.||.|+..|+.+.++.|++.|++++.. .|..|.||||+|+. .|+.++++.|++.+ .+++.+|..|+||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g-a~vn~~d~~g~Tp 210 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAKAADGNTA 210 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHS-CCTTCCCSSSCCH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcC-CCCCccCCCCCcH
Confidence 347899999999999999999999887542 27789999999966 89999999999987 5788889999999
Q ss_pred hhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHhCCcHHHHHHHHhcCCCcccccCCCCCHH
Q 007515 252 LHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATAGKLTTMVIYLLKLGVDVNAINRKGYTAL 321 (600)
Q Consensus 252 Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~gad~n~~n~~G~T~l 321 (600)
||+|+.+|+.+++++|++. ++++|.+|.+|+||||+|+..|+.+++++|+++|++++..+..+.+++
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~---ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~h~~~~~ 277 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKG---RALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLHVDYSW 277 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHT---CCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-------------
T ss_pred HHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCcceeeccc
Confidence 9999999999999999987 678999999999999999999999999999999999988544443333
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.74 E-value=7.9e-18 Score=137.26 Aligned_cols=93 Identities=34% Similarity=0.486 Sum_probs=83.4
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHh
Q 007515 44 SLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACER 123 (600)
Q Consensus 44 ~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~ 123 (600)
+|+||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++.++++. ..|..|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHc
Confidence 478999999999999999999999887 88899999999999999999999999999998874 4588999999999999
Q ss_pred CCHHHHHHHHhCCcc
Q 007515 124 GRLDVAKQLLNYSSL 138 (600)
Q Consensus 124 g~~e~v~~Ll~~~~~ 138 (600)
|+.+++++|+++|++
T Consensus 79 ~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 79 GHLEVVKLLLEAGAY 93 (93)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHcCCC
Confidence 999999999998763
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.74 E-value=7.8e-18 Score=137.28 Aligned_cols=92 Identities=36% Similarity=0.537 Sum_probs=47.8
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhHhHhcCchhHHHHHHHhcccccccCCCCCCCChHhHHHHh
Q 007515 214 GRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHLTVKNNQYEAVKYLMETLNITKLANMPDNDGNTILHLATA 293 (600)
Q Consensus 214 g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~Av~~~~~~iv~~Ll~~~~~~~~~n~~d~~G~T~Lh~A~~ 293 (600)
|+||||+|+..|+.+++++|++.+ .+++.+|..|+||||+|+..++.+++++|++. +.+++.+|.+|+||||+|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g-~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~d~~g~t~l~~A~~ 77 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA---GADVNAKDKNGRTPLHLAAR 77 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCCccCCCCCCHHHHHHH
Confidence 444444444444444444444433 23334444444444444444444445544443 33455566666666666666
Q ss_pred CCcHHHHHHHHhcCCC
Q 007515 294 GKLTTMVIYLLKLGVD 309 (600)
Q Consensus 294 ~~~~~iv~~Ll~~gad 309 (600)
.++.+++++|+++|++
T Consensus 78 ~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 78 NGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TTCHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHcCCC
Confidence 6666666666666653
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.71 E-value=3.3e-17 Score=176.25 Aligned_cols=128 Identities=20% Similarity=0.146 Sum_probs=95.3
Q ss_pred CcHhHHHHHcCCHHHHHHHHhCCcccccc-----cCCCCCcHHHHHHH---hCCHHHHHHHHhCCcccccccCCCChHHH
Q 007515 80 ETPLHEACREGRLNFVKLFVGIDPSVIYK-----LNRDNESVLYVACE---RGRLDVAKQLLNYSSLLILEVDGLTTSLH 151 (600)
Q Consensus 80 ~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~-----~~~~g~tpL~~A~~---~g~~e~v~~Ll~~~~~~~~~~~~~~t~Lh 151 (600)
.+.||.|+..|+.++|+.|++.+++++.. .+..|.||||+||. .|+.+++++|+++|++++..+..|.||||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh 212 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHH
Confidence 36688888888888888888777765432 25677888888865 77788888888888777777777777888
Q ss_pred HHHhcCCHHHHHHHHhcCccccccCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCC
Q 007515 152 VSAMAGHLDIVKELLEARQEFAWKKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSS 208 (600)
Q Consensus 152 ~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~ 208 (600)
+|+..|+.+++++|++.+++++ ..|..|+||||+|+..|+.+++++|+++|++...
T Consensus 213 ~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKGRALVG-TVNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp HHTTTTCHHHHHHHHHTCCCCS-CCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred HHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 8888888888888888777765 6677888888888888888888888888877654
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.69 E-value=4.6e-17 Score=138.33 Aligned_cols=107 Identities=25% Similarity=0.276 Sum_probs=90.0
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHHHH
Q 007515 41 VPGSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLYVA 120 (600)
Q Consensus 41 ~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A 120 (600)
.+..|.|+||+||..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++.++++. ..|..|.|||++|
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~d~~g~tpl~~A 82 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN-ARSKDGNTPEHLA 82 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTT-CCCTTCCCTTHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc-ccCCCCCCHHHHH
Confidence 467789999999999999999999998877 78888889999999999999999999998888764 4578889999999
Q ss_pred HHhCCHHHHHHHHhCCcccccccCCCChH
Q 007515 121 CERGRLDVAKQLLNYSSLLILEVDGLTTS 149 (600)
Q Consensus 121 ~~~g~~e~v~~Ll~~~~~~~~~~~~~~t~ 149 (600)
+..|+.+++++|++++++++.....+.+|
T Consensus 83 ~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp HTTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred HHCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 99999999999999888888776666544
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.59 E-value=3.4e-15 Score=125.65 Aligned_cols=92 Identities=26% Similarity=0.386 Sum_probs=81.2
Q ss_pred ccCCCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCcccccccCCCCCcHHH
Q 007515 39 QTVPGSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACREGRLNFVKLFVGIDPSVIYKLNRDNESVLY 118 (600)
Q Consensus 39 ~~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~ 118 (600)
...+.+|.|+||+||..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++.++++. ..|..|.||||
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~ 95 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGAD-VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVX-AQDKFGKTAFD 95 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccccCCCcHHH
Confidence 44567899999999999999999999999877 78889999999999999999999999999988864 45889999999
Q ss_pred HHHHhCCHHHHHHH
Q 007515 119 VACERGRLDVAKQL 132 (600)
Q Consensus 119 ~A~~~g~~e~v~~L 132 (600)
+|+..|+.+++++|
T Consensus 96 ~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 96 ISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHh
Confidence 99999999999886
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.56 E-value=8.8e-15 Score=123.13 Aligned_cols=91 Identities=21% Similarity=0.353 Sum_probs=58.2
Q ss_pred cCCCCCChHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccccchhhH
Q 007515 175 KKDLNGHTPLHLSCSKGHLEITRELLKLDPDLSSLPDNEGRTPLHWAAIKGRINIIDEILSLNLQSAEMRTIHGETVLHL 254 (600)
Q Consensus 175 ~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~ 254 (600)
..|.+|.||||+|+..|+.+++++|++.++++.. .|..|.||||+|+..|+.+++++|++.+ ...+.+|..|+||||+
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~-~d~~g~tpLh~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADVAA-KDKNGSTPLHLAARNGHLEVVKLLLEAG-ADVXAQDKFGKTAFDI 96 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccccCCCcHHHH
Confidence 4566677777777777777777777777766644 5666777777777777777777777654 3455555566666666
Q ss_pred hHhcCchhHHHHH
Q 007515 255 TVKNNQYEAVKYL 267 (600)
Q Consensus 255 Av~~~~~~iv~~L 267 (600)
|+..++.+++++|
T Consensus 97 A~~~~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 6666666666554
No 115
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=72.59 E-value=15 Score=36.28 Aligned_cols=122 Identities=8% Similarity=-0.071 Sum_probs=76.1
Q ss_pred cCccccHHHHHHHHcCCHHHHHHHHhhchh-hhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhC-chh-hhccCCCCCcH
Q 007515 6 INPYMERHLFETILRGDTQAFLSLIQQDEA-KIKQTVPGSLNTILHLTARFGHEELASEILKLC-PEM-VAAENEKMETP 82 (600)
Q Consensus 6 ~~~~~~~~L~~A~~~gd~~~~~~ll~~~~~-~l~~~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~-~~~-l~~~n~~g~Tp 82 (600)
.++++..-|...+..++.+....++++-.. ...-..|..|+.++.....+|..+....+++.- +.+ --..+..|.-.
T Consensus 33 ~dq~gsR~lQ~~l~~~~~~~~~~i~~ei~~~~~~L~~d~~gn~vvQklle~~~~~~~~~i~~~i~g~~~~l~~~~~G~rv 112 (351)
T 3gvo_A 33 QDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRV 112 (351)
T ss_dssp TSHHHHHHHHHHHHHCCHHHHHHHHHHHGGGHHHHHTSTTHHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHTSTTHHHH
T ss_pred cCCcchHHHHHHHhhCCHHHHHHHHHHHHHhHHHHHhChhhhHHHHHHHhhCCHHHHHHHHHHHHhhHHHHhhCHHhHHH
Confidence 456677788888888888877777665432 233456888999999999999998888887642 221 22456667777
Q ss_pred hHHHHHcCCHHHHHHHHhCC-cc-cccccCCCCCcHHHHHHHhCCHH
Q 007515 83 LHEACREGRLNFVKLFVGID-PS-VIYKLNRDNESVLYVACERGRLD 127 (600)
Q Consensus 83 Lh~Aa~~g~~~iv~~Ll~~~-~~-~~~~~~~~g~tpL~~A~~~g~~e 127 (600)
+..+......+-...+++.- +. ..-..|..|...+..+...+..+
T Consensus 113 vQk~le~~~~~~~~~i~~el~~~~~~L~~d~~Gn~ViQk~l~~~~~~ 159 (351)
T 3gvo_A 113 IQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQ 159 (351)
T ss_dssp HHHHHHHSCHHHHHHHHGGGTTCHHHHHHSTTHHHHHHHHHHHSCGG
T ss_pred HHHHHHhCCHHHHHHHHHHhhhhHHHHHHhhhhhHHHHHHHHhCCHH
Confidence 77777766665545444321 11 11223555555555555544443
No 116
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=63.40 E-value=55 Score=28.64 Aligned_cols=133 Identities=14% Similarity=0.075 Sum_probs=79.9
Q ss_pred cccHHHHHHHHcCCHHHHHHHHhhchhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhccCCCCCcHhHHHHH
Q 007515 9 YMERHLFETILRGDTQAFLSLIQQDEAKIKQTVPGSLNTILHLTARFGHEELASEILKLCPEMVAAENEKMETPLHEACR 88 (600)
Q Consensus 9 ~~~~~L~~A~~~gd~~~~~~ll~~~~~~l~~~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~~l~~~n~~g~TpLh~Aa~ 88 (600)
..+.++--|+..||++....+.++-.. .....+.=..|...|+.++++....+..+. ...+.+...
T Consensus 7 D~~~rF~LAL~lg~l~~A~e~a~~l~~------~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~--------~~L~~Ly~~ 72 (177)
T 3mkq_B 7 DPHIRFDLALEYGNLDAALDEAKKLND------SITWERLIQEALAQGNASLAEMIYQTQHSF--------DKLSFLYLV 72 (177)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHCC------HHHHHHHHHHHHHTTCHHHHHHHHHHTTCH--------HHHHHHHHH
T ss_pred ChHHHHHHHHhcCCHHHHHHHHHHhCC------HHHHHHHHHHHHHcCChHHHHHHHHHhCCH--------HHHHHHHHH
Confidence 345667778888888888777653211 112345556777888888888888765542 223445555
Q ss_pred cCCHHHHHHHHhCCcccccccCCCCCcHHHHHHHhCCHH-HHHHHHhCCcccccccCCCChHHHHHHhcCCHHHHHHHHh
Q 007515 89 EGRLNFVKLFVGIDPSVIYKLNRDNESVLYVACERGRLD-VAKQLLNYSSLLILEVDGLTTSLHVSAMAGHLDIVKELLE 167 (600)
Q Consensus 89 ~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e-~v~~Ll~~~~~~~~~~~~~~t~Lh~A~~~g~~~~v~~Ll~ 167 (600)
.|+.+-++.+.+.. ....+....++.+...|+.+ .++.|.+.+... -+...|-.+|..++.+.+++
T Consensus 73 tg~~e~L~kla~iA-----~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~~--------eA~~~A~t~g~~~~a~~~~~ 139 (177)
T 3mkq_B 73 TGDVNKLSKMQNIA-----QTREDFGSMLLNTFYNNSTKERSSIFAEGGSLP--------LAYAVAKANGDEAAASAFLE 139 (177)
T ss_dssp HTCHHHHHHHHHHH-----HHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHH--------HHHHHHHHTTCHHHHHHHHH
T ss_pred hCCHHHHHHHHHHH-----HHCccHHHHHHHHHHcCCHHHHHHHHHHCCChH--------HHHHHHHHcCcHHHHHHHHH
Confidence 77777666654311 11233345667777777765 455555444322 15566777788888887775
Q ss_pred c
Q 007515 168 A 168 (600)
Q Consensus 168 ~ 168 (600)
.
T Consensus 140 ~ 140 (177)
T 3mkq_B 140 Q 140 (177)
T ss_dssp H
T ss_pred H
Confidence 4
No 117
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=53.82 E-value=32 Score=33.75 Aligned_cols=20 Identities=15% Similarity=0.433 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHhhee
Q 007515 492 VMWLSVSFLAAAYIAAIWTI 511 (600)
Q Consensus 492 ~~~~~~~~~~~af~~~~~~~ 511 (600)
+..+++.++..+|++|+|=+
T Consensus 282 LTiit~IflP~T~IaGiyGM 301 (339)
T 4ev6_A 282 LTMVTTIFAVPMWITGIYGM 301 (339)
T ss_dssp HHHHHHHSSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhhccC
Confidence 44567888889999999943
No 118
>3k49_A MRNA-binding protein PUF3; PUF3, pumilio, RNA binding, mitochondrial mRNA,, membrane, mitochondrion; HET: CIT; 2.50A {Saccharomyces cerevisiae} SCOP: a.118.1.0 PDB: 3k4e_A
Probab=50.78 E-value=42 Score=33.31 Aligned_cols=120 Identities=11% Similarity=-0.024 Sum_probs=70.8
Q ss_pred cCccccHHHHHHHHcCCHHHHHHHHhhchh-hhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhC-chh-hhccCCCCCcH
Q 007515 6 INPYMERHLFETILRGDTQAFLSLIQQDEA-KIKQTVPGSLNTILHLTARFGHEELASEILKLC-PEM-VAAENEKMETP 82 (600)
Q Consensus 6 ~~~~~~~~L~~A~~~gd~~~~~~ll~~~~~-~l~~~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~-~~~-l~~~n~~g~Tp 82 (600)
.++++...+...+..++.+....++++-.. ...-..|..|+.++.....++..+....+++.- +.. --..+..|.-.
T Consensus 38 ~d~~gsR~lQ~~l~~~~~~~~~~I~~el~~~~~~L~~d~~gn~vvQkll~~~~~~~~~~i~~~~~g~~~~L~~~~~G~rV 117 (369)
T 3k49_A 38 KDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKFFEFGSKIQKNTLVDQFKGNMKQLSLQMYACRV 117 (369)
T ss_dssp TSHHHHHHHHHHHTTCCHHHHHHHHHHHGGGHHHHHHSTTTHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHHSTTHHHH
T ss_pred cCCcchHHHHHHhccCCHHHHHHHHHHHHHHHHHHhhCcccccHHHHHHHhCCHHHHHHHHHHHhhhHHHHhcChhhHHH
Confidence 356677788888888888877777665322 233456788999999999999988777777642 111 11245556555
Q ss_pred hHHHHHcCCHHHHHHHHhC-Ccc-cccccCCCCCcHHHHHHHhCC
Q 007515 83 LHEACREGRLNFVKLFVGI-DPS-VIYKLNRDNESVLYVACERGR 125 (600)
Q Consensus 83 Lh~Aa~~g~~~iv~~Ll~~-~~~-~~~~~~~~g~tpL~~A~~~g~ 125 (600)
+.-+......+-...+++. .+. ..-..|.+|...+......+.
T Consensus 118 lQk~le~~~~~q~~~ii~el~~~~~~L~~d~~Gn~ViQ~~l~~~~ 162 (369)
T 3k49_A 118 IQKALEYIDSNQRIELVLELSDSVLQMIKDQNGNHVIQKAIETIP 162 (369)
T ss_dssp HHHHHHHSCHHHHHHHHGGGTTCHHHHHHSTTHHHHHHHHHHHSC
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHhcCcccchHHHHHHHhCC
Confidence 6666655554444444332 111 111235555555555554443
No 119
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=39.87 E-value=31 Score=34.18 Aligned_cols=20 Identities=20% Similarity=0.542 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHhhee
Q 007515 492 VMWLSVSFLAAAYIAAIWTI 511 (600)
Q Consensus 492 ~~~~~~~~~~~af~~~~~~~ 511 (600)
+..+++.+|..+|++|+|=+
T Consensus 306 LTiit~IflP~T~IaGiyGM 325 (363)
T 2iub_A 306 LTIIATIFMPLTFIAGIYGM 325 (363)
T ss_dssp HHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHHHHHHHHHHHHhhhcc
Confidence 44568888999999999943
No 120
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=39.27 E-value=18 Score=22.50 Aligned_cols=20 Identities=15% Similarity=0.436 Sum_probs=15.9
Q ss_pred ccHHHHHHHHcCCHHHHHHH
Q 007515 10 MERHLFETILRGDTQAFLSL 29 (600)
Q Consensus 10 ~~~~L~~A~~~gd~~~~~~l 29 (600)
....++.|+.+||.+.++.|
T Consensus 13 iEQqiyvA~seGd~etv~~L 32 (40)
T 1gp8_A 13 IRKQMDAAASKGDVETYRKL 32 (40)
T ss_dssp HHHHHHHHHTTSCHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHH
Confidence 56678888888888888776
No 121
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=34.22 E-value=81 Score=23.43 Aligned_cols=27 Identities=11% Similarity=-0.047 Sum_probs=13.8
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHH
Q 007515 523 AAVVSLGGGFTLAIFTGLGVLLARHWL 549 (600)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (600)
+++.++++.+++.+++.+.++++..+-
T Consensus 13 Iv~gvi~gilliGllllliwk~~~~i~ 39 (79)
T 2knc_B 13 VLLSVMGAILLIGLAALLIWKLLITIH 39 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444545555555555555554444
No 122
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=29.81 E-value=1.1e+02 Score=29.81 Aligned_cols=89 Identities=7% Similarity=-0.019 Sum_probs=53.6
Q ss_pred cCccccHHHHHHHHcCCHHHHHHHHhhchh-hhhccCCCCCCcHHHHHHHhCCHHHHHHHHHh-Cch-hhhccCCCCCcH
Q 007515 6 INPYMERHLFETILRGDTQAFLSLIQQDEA-KIKQTVPGSLNTILHLTARFGHEELASEILKL-CPE-MVAAENEKMETP 82 (600)
Q Consensus 6 ~~~~~~~~L~~A~~~gd~~~~~~ll~~~~~-~l~~~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~-~~~-~l~~~n~~g~Tp 82 (600)
.+++++..+.+.+..|+.+....+++.-.. ...-..+..|.-++..+......+-...+++. .+. .--..|..|+..
T Consensus 69 ~d~~gn~vvQklle~~~~~~~~~i~~~i~g~~~~l~~~~~G~rvvQk~le~~~~~~~~~i~~el~~~~~~L~~d~~Gn~V 148 (351)
T 3gvo_A 69 TDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHV 148 (351)
T ss_dssp TSTTHHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHGGGTTCHHHHHHSTTHHHH
T ss_pred hChhhhHHHHHHHhhCCHHHHHHHHHHHHhhHHHHhhCHHhHHHHHHHHHhCCHHHHHHHHHHhhhhHHHHHHhhhhhHH
Confidence 366677777777778888777766654322 12234566788888888888877766666653 121 122356666666
Q ss_pred hHHHHHcCCHHH
Q 007515 83 LHEACREGRLNF 94 (600)
Q Consensus 83 Lh~Aa~~g~~~i 94 (600)
+......+..+.
T Consensus 149 iQk~l~~~~~~~ 160 (351)
T 3gvo_A 149 VQKCIECVQPQS 160 (351)
T ss_dssp HHHHHHHSCGGG
T ss_pred HHHHHHhCCHHH
Confidence 665555554433
No 123
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=28.40 E-value=75 Score=21.67 Aligned_cols=15 Identities=27% Similarity=0.131 Sum_probs=7.8
Q ss_pred chHHHHHHHHhhhhh
Q 007515 518 MVWVSAAVVSLGGGF 532 (600)
Q Consensus 518 ~~~~~~~~~~~~~~~ 532 (600)
..|..+.+.++++.+
T Consensus 10 vp~wiIi~svl~GLl 24 (54)
T 2knc_A 10 IPIWWVLVGVLGGLL 24 (54)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHH
Confidence 445555565555433
No 124
>3a7m_A Flagellar protein FLIT; UP-DOWN helix bundle, bacterial flagellum biogenesis, chaper cytoplasm, repressor, transcription; 3.20A {Salmonella typhimurium}
Probab=28.22 E-value=31 Score=28.22 Aligned_cols=61 Identities=11% Similarity=0.012 Sum_probs=40.9
Q ss_pred ccHHHHHHHHcCCHHHHHHHHhhchhhhhccCCCCCCcHHHHHHHhCCHHHHHHHHHhCch
Q 007515 10 MERHLFETILRGDTQAFLSLIQQDEAKIKQTVPGSLNTILHLTARFGHEELASEILKLCPE 70 (600)
Q Consensus 10 ~~~~L~~A~~~gd~~~~~~ll~~~~~~l~~~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~~~~ 70 (600)
....+..+++.||||.+..+=......+.........++|.-+.+....++++.++++...
T Consensus 17 lS~~ML~aA~~gdWD~Lv~lE~~y~~~Ve~l~~~~~~~~l~~~~~~~~~~lL~~IL~nDae 77 (122)
T 3a7m_A 17 LSQSLLELAQRGEWDLLLQQEVSYLQSIETVMEKQTPPGITRSIQDMVAGYIKQTLDNEQL 77 (122)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhHHH
Confidence 3467889999999999988755554433333223334567777777777888888876544
No 125
>3k49_A MRNA-binding protein PUF3; PUF3, pumilio, RNA binding, mitochondrial mRNA,, membrane, mitochondrion; HET: CIT; 2.50A {Saccharomyces cerevisiae} SCOP: a.118.1.0 PDB: 3k4e_A
Probab=26.86 E-value=2.8e+02 Score=27.14 Aligned_cols=126 Identities=9% Similarity=0.052 Sum_probs=64.6
Q ss_pred CccccHHHHHHHHcCCHHHHHHHHhhchhh-hhccCCCCCCcHHHHHHHhCCHHHHHHHHHh-Cch-hhhccCCCCCcHh
Q 007515 7 NPYMERHLFETILRGDTQAFLSLIQQDEAK-IKQTVPGSLNTILHLTARFGHEELASEILKL-CPE-MVAAENEKMETPL 83 (600)
Q Consensus 7 ~~~~~~~L~~A~~~gd~~~~~~ll~~~~~~-l~~~~~~~g~T~Lh~Aa~~g~~e~v~~Ll~~-~~~-~l~~~n~~g~TpL 83 (600)
+++++.-+.+.+..++.+....+++.-... ..-..+..|.-++..+......+-...+++. .+. .--..|..|+..+
T Consensus 75 d~~gn~vvQkll~~~~~~~~~~i~~~~~g~~~~L~~~~~G~rVlQk~le~~~~~q~~~ii~el~~~~~~L~~d~~Gn~Vi 154 (369)
T 3k49_A 75 DVFGNYVIQKFFEFGSKIQKNTLVDQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVLELSDSVLQMIKDQNGNHVI 154 (369)
T ss_dssp STTTHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHHSTTHHHHHHHHHHHSCHHHHHHHHGGGTTCHHHHHHSTTHHHHH
T ss_pred CcccccHHHHHHHhCCHHHHHHHHHHHhhhHHHHhcChhhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCcccchHH
Confidence 555666666666777766555555432211 1112345566677777777666555555543 111 1223566676666
Q ss_pred HHHHHcCCHH----HHHHHHhCCcccccccCCCCCcHHHHHHHhCCHHHHHHHHh
Q 007515 84 HEACREGRLN----FVKLFVGIDPSVIYKLNRDNESVLYVACERGRLDVAKQLLN 134 (600)
Q Consensus 84 h~Aa~~g~~~----iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~e~v~~Ll~ 134 (600)
......+..+ +++.+.+.-..+ ..+..|...+.-+...+..+--+.+++
T Consensus 155 Q~~l~~~~~~~~~~i~~~~~~~~~~l--s~~~~Gs~Vvq~~l~~~~~~~~~~i~~ 207 (369)
T 3k49_A 155 QKAIETIPIEKLPFILSSLTGHIYHL--STHSYGCRVIQRLLEFGSSEDQESILN 207 (369)
T ss_dssp HHHHHHSCGGGCHHHHHHHTTTHHHH--HTSTTHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHH--hCCCccCcHHHHHHHhCCHHHHHHHHH
Confidence 6666555432 333332221111 235566666666666666554444443
No 126
>2f3y_B Voltage-dependent L-type calcium channel alpha- 1C subunit; calmodulin, calmodulin complex, calcium channnel, CAV1.2, IQ domain; 1.45A {Homo sapiens} PDB: 2f3z_B 2vay_B
Probab=25.24 E-value=50 Score=18.53 Aligned_cols=17 Identities=29% Similarity=0.595 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHhhhc
Q 007515 543 LLARHWLRKWEWRKMKE 559 (600)
Q Consensus 543 ~~~~~~~~~~~~~~~~~ 559 (600)
.|+.++|||++.|+..+
T Consensus 6 ~LIqdyfRkfkkrke~~ 22 (26)
T 2f3y_B 6 FLIQEYFRKFKKRKEQX 22 (26)
T ss_pred hhHHHHHHHHHHhHHhh
Confidence 46788999888776543
Done!